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These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 886 cluster # 886       Sequences # 2       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_886#0 length = 524 sequences # 1  
consensus_886#1 length = 307 sequences # 1  

consensusID : consensus_886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 524
fasta sequence
                              [TTTTTTTTTGTGAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACCGCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCCCCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTGCTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTAGAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAACACCAACCCCTTGCCCCACACGCTCGGGTACAGGTAGGTGTCGTAGATGGTGTCGCTGCTGATCGTGAACGTGCCGTAGTACACCTGTGCTCCCGCCCCATCCAGATCTTCCTGCTCGGTGGGCTGTTGGGTTAAGAAGTTCTCCAGATAGCGATAGCTGTCCAGCGGGAACGAGGTGATGGTCCAGTTGTACAGTGGTTTCGCATCCACTGTCACTGTCCCGA]

[+] EMBL AGA281636            [TTTTTTTTTGTGAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACCGCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCCCCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTGCTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTAGAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAACACCAACCCCTTGCCCCACACGCTCGGGTACAGGTAGGTGTCGTAGATGGTGTCGCTGCTGATCGTGAACGTGCCGTAGTACACCTGTGCTCCCGCCCCATCCAGATCTTCCTGCTCGGTGGGCTGTTGGGTTAAGAAGTTCTCCAGATAGCGATAGCTGTCCAGCGGGAACGAGGTGATGGTCCAGTTGTACAGTGGTTTCGCATCCACTGTCACTGTCCCGA]


>consensus_886#0 TTTTTTTTTGTGAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACC GCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCC CCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTG CTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTA GAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAA CACCAACCCCTTGCCCCACACGCTCGGGTACAGGTAGGTGTCGTAGATGGTGTCGCTGCT GATCGTGAACGTGCCGTAGTACACCTGTGCTCCCGCCCCATCCAGATCTTCCTGCTCGGT GGGCTGTTGGGTTAAGAAGTTCTCCAGATAGCGATAGCTGTCCAGCGGGAACGAGGTGAT GGTCCAGTTGTACAGTGGTTTCGCATCCACTGTCACTGTCCCGA



consensusID : consensus_886#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 307
fasta sequence
                              [GAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACCGCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCCCCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTGCTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTAGAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAACACCGGACGCGTGGGCGG]

[-] EMBL BM591428             [GAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACCGCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCCCCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTGCTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTAGAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAACACCGGACGCGTGGGCGG]


>consensus_886#1 GAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACCGCATCTATATT ATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCCCCCCACTTACA TAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTGCTGGTACTCGA TCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTAGAGCGTAATCT GCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAACACCGGACGCG TGGGCGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_886#0      TTTTTTTTTGTGAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACC 60
consensus_886#1      -----------GAAATTATTGATCAATATTGATCGGAATGAATTTTTATTAAACCTTACC 49
                                *************************************************

consensus_886#0      GCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCC 120
consensus_886#1      GCATCTATATTATGTTCACTGTAATATAAGTTCCATAAGTACTACGTTTTGAGAAATTCC 109
                     ************************************************************

consensus_886#0      CCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTG 180
consensus_886#1      CCCCACTTACATAAAGATAGGCTTATCGATAAACTGCACGTACGGATGCTGGATGTGCTG 169
                     ************************************************************

consensus_886#0      CTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTA 240
consensus_886#1      CTGGTACTCGATCATGACGATCTGGTTGTTTCCCTTCTTAAGAATGTGTCTCGGCACGTA 229
                     ************************************************************

consensus_886#0      GAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAA 300
consensus_886#1      GAGCGTAATCTGCGGTCCAGCTAATGGCCAGTAGCGGCCCAGGTTGAAGCCATTGATAAA 289
                     ************************************************************

consensus_886#0      CACCAACCCCTTGCCCCACACGCTCGGGTACAGGTAGGTGTCGTAGATGGTGTCGCTGCT 360
consensus_886#1      CACCGGACGCGTGGGCGG------------------------------------------ 307
                     ****   * * **  *                                            

consensus_886#0      GATCGTGAACGTGCCGTAGTACACCTGTGCTCCCGCCCCATCCAGATCTTCCTGCTCGGT 420
consensus_886#1      ------------------------------------------------------------
                                                                                 

consensus_886#0      GGGCTGTTGGGTTAAGAAGTTCTCCAGATAGCGATAGCTGTCCAGCGGGAACGAGGTGAT 480
consensus_886#1      ------------------------------------------------------------
                                                                                 

consensus_886#0      GGTCCAGTTGTACAGTGGTTTCGCATCCACTGTCACTGTCCCGA 524
consensus_886#1      --------------------------------------------
                                                                 




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)