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Anopheles gambiae
cluster # 8863 cluster # 8863       Sequences # 12       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8863#0 length = 1599 sequences # 5  
consensus_8863#1 length = 1085 sequences # 2  
consensus_8863#2 length = 612 sequences # 3  
consensus_8863#3 length = 336 sequences # 1  
consensus_8863#4 length = 92 sequences # 1  

consensusID : consensus_8863#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1599
fasta sequence
                              [ACCCACGCGTCCGGAGCGGCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCGCCGCACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGGTTTGCTTGTTTTGACGTGATTTAATCTAATCTCCCGCATCTAATGCAACTGACTGATGATGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCATGCAAGAAAAAAGTGACACCTCCTCCACCCGTTACACACATACCTGCGAAACCCAATTGGTCCAAGGTGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGTACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGTATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCG--AGAGAGAGACAGTTGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGAAAGAGTGGCCGCGATGGAGGTACAGAACGCGCCAACGACTGGTGGC---GGTGGTAGTACGCCCACTGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGGGTTTCGAGTACACGGACTGCATTACCGGCTACATCCGCGGGTACGTGCGCCGGTTCTGGCAGGGCAATGTGACGCACCGTGGGACCAAGGAGAAGCCGGGTCGCGTGGCCACTTTAATCGAGGACAAAGAGGGTATCACATGGGGCTGTGCATTTAGGGTGACCGGAAGCCACGCGCTGGACTATCTGCAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCTATCCCCGGATCGCAACCGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGGCCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGGCCATGTTCATGCGGGACGAGCTGCCGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGGGGCTCGTGCGCCGGTTCGTGGCGGAAGCGAACGTGCAGCTGGAGCTGCTGCTGGTCGGAAACGTTACACCTCACCGGATCCGGCGCGATACGCATGAGGAGGTGCGGCGCCACGTCACGTTCGAGTACACGTCGCGCGTTCCCGATACCAAGCTGCGCTGTTTGCACATCTAAACCTCCTCCTCCCCCGCCCCGCGGTCCTGTCCGATACTCATTGAACGCCATTTAATTAGTACTTTGCTTTAAAGTTCTTTTCTACGAAACGCACAAAGAGAAGCACCACACACACGCGCGCGTGTGAATCCGATTGGTGGGTGTGCGTGTGTGTGTGAGCGTGTTTCCTTTTTTACAATACAAAACAAACAAAAATCCCTAGCCTTAAGACTGCTACCACTGAACGCTACTACTATTACTACTACAGTTGACTATAAAGTGTTTTATGTTATAATGAAATATAGAG]

[+] EMBL BM655665             [ACCCACGCGTCCGGAGCGGCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCGCCGCACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGGTTTGCTTGTTTTGACGTGATTTAATCTAATCTCCCGCATCTAATGCAACTGACTGATGATGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCATGCAAGAAAAAAGTGACACCTCCTCCACCCGTTACACACATACCTGCGAAACCCAATTGGTCCAAGGTGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGTACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGTATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCG  AGAGAGAGACAGTTGTGCTTTCTTCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGAAAGAGTGGCCGCGATGGAGGTACAGAACGCGCCAACGACTGGTGGC   GGTGGTAGTACGCCCACTGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGGGTTTCGAGTACACGGACTGCATTACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX616618             [                                                                                                                                                                                                         TACCCATTAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTACACACATACTTGCGAAACCCAATTGGCCCAAGGTGTTCGGCAAACCACTCGCAGGACGGCGTCAGCTACTAGCATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTACGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTATTCAAGCGCGAGCGATAGAGAGAGAAAATTGCGCTTTCATCTACATCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGAAAGAGTGGCCGCGATGGAGGTACAGAACGCGCCAACGACTGGTGGCGGTGGTGGTAGTACGCCCACTGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGGGTTTCGAGTACACGGACTGCATTACCGGCTACATCCGCGGGTACGTGCGCCGGTTCTGGCAGGGCAATGTGACGCACCGTGGGACCAAGGAGAAGCCGGGTCGCGTGGCCACTTTAATCGAGGACAAAGAGGGTATCACATGGGGCTGTGCATTTAGGGTGACCGGAAGCCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BX621578             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGTTGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGAAAGAGTGGCCGCGATGGAGGTACAGAACGCGCCAACGACTGGTGGT   GGTGGTAGTACGCCCACTGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGGGTTTCGAGTACACGGACTGCATTACCGGCTACATCCGCGGGTACGTGCGCCGGTTCTGGCAGGGCAATGTGACGCACCGTGGGACCAAGGAGAAGCCGGGTCGCGTGGCCACTTTAATCGAGGACAAAGAGGGTATCACATGGGGCTGTGCATTTAGGGTGACCGGAAGCCACGCGCTGGACTATCTGCAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCTATCCCCGGATCGCAACCGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGGCCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX607600             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGGGTTTCGAGTACACGGACTGCATTACCGGCTACATCCGCGGGTACGTGCGCCGGTTCTGGCAGGGCAATGTGACGCACCGTGGGACCAAGGAGAAGCCGGGTCGCGTGGCCACTTTAATCGAGGACAAAGAGGGTATCACATGGGGCTGTGCATTTAGGGTGACCGGAAGCCACGCGCTGGACTATCTGCAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCTACCCCCGGATCGCAACCGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGGCCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGGCCATGTTCATGCGGGACGAGCTGCCGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGGGGCTCGTGCGCCGGTTCGTGGCGGAAGCGAACGTGCAGCTGGAGCTGCTGCTGGTCGGAAACGTTACACCTCACCGGATCCGGCGCGATACGCATGAGGAGGTGCGGCGCCACGTCACGTTCGAGTACACGTCGCGCGTTCCCGATACCAAGCTGCGCTGTTTGCACATCTAAACCTCCTCCTCCCCCGCCCCGCGGTCCTGTCCGAT                                                                                                                                                                                                                                                           ]
[+] EMBL BX612512             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGTTCTATCCCCGGATCGCAACCGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGGCCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGGCCATGTTCATGCGGGACGAGCTGCCGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGGGGCTCGTGCGCCGGTTCGTGGCTGAAGCGAACGTGCAGCTGGAGCTGCTGCTGGTCGGAAACGTTACACCTCACCGGATCCGGCGCGATACGCATGAGGAGGTGCGGCGCCACGTCACGTTCGAGTACACGTCGCGCGTTCCCGATACCAAGCTGCGCTGTTTGCACATCTAAACCTCCTCCTCCCCCGCCCCGCGGTCCTGTCCGATACTCATTGAACGCCATTTAATTAGTACTTTGCTTTAAAGTTCTTTTCTACGAAACGCACAAAGAGAAGCACCACACACACGCGCGCGTGTGAATCCGATTGGTGGGTGTGCGTGTGTGTGTGAGCGTGTTTCCTTTTTTACAATACAAAACAAACAAAAATCCCTAGCCTTAAGACTGCTACCACTGAACGCTACTACTATTACTACTACAGTTGACTATAAAGTGTTTTATGTTATAATGAAATATAGAG]


>consensus_8863#0 ACCCACGCGTCCGGAGCGGCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCGCCGC ACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGGTTTGCTTGTTTTGACGTGATTTAA TCTAATCTCCCGCATCTAATGCAACTGACTGATGATGTGCGTCTGAGTGTGTGCGTGCCA AAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCATGCAAGA AAAAAGTGACACCTCCTCCACCCGTTACACACATACCTGCGAAACCCAATTGGTCCAAGG TGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGTACA GGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGTATCACACCACACGCGCATG AGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCGAGAGAGAG ACAGTTGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTG GTGTGTTTACAAACGAAAGAGTGGCCGCGATGGAGGTACAGAACGCGCCAACGACTGGTG GCGGTGGTAGTACGCCCACTGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGG GTTTCGAGTACACGGACTGCATTACCGGCTACATCCGCGGGTACGTGCGCCGGTTCTGGC AGGGCAATGTGACGCACCGTGGGACCAAGGAGAAGCCGGGTCGCGTGGCCACTTTAATCG AGGACAAAGAGGGTATCACATGGGGCTGTGCATTTAGGGTGACCGGAAGCCACGCGCTGG ACTATCTGCAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCT ATCCCCGGATCGCAACCGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGT ACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCC GCCAAATCGTCGAGTGCCGCGGCCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGG CCATGTTCATGCGGGACGAGCTGCCGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGG GGCTCGTGCGCCGGTTCGTGGCGGAAGCGAACGTGCAGCTGGAGCTGCTGCTGGTCGGAA ACGTTACACCTCACCGGATCCGGCGCGATACGCATGAGGAGGTGCGGCGCCACGTCACGT TCGAGTACACGTCGCGCGTTCCCGATACCAAGCTGCGCTGTTTGCACATCTAAACCTCCT CCTCCCCCGCCCCGCGGTCCTGTCCGATACTCATTGAACGCCATTTAATTAGTACTTTGC TTTAAAGTTCTTTTCTACGAAACGCACAAAGAGAAGCACCACACACACGCGCGCGTGTGA ATCCGATTGGTGGGTGTGCGTGTGTGTGTGAGCGTGTTTCCTTTTTTACAATACAAAACA AACAAAAATCCCTAGCCTTAAGACTGCTACCACTGAACGCTACTACTATTACTACTACAG TTGACTATAAAGTGTTTTATGTTATAATGAAATATAGAG



consensusID : consensus_8863#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1085
fasta sequence
                              [CCGAGGTTAAAAACTTCTGCCACTGTCGTTGACCGTCGTCGTCATCAGTCGTCGCTGTCGTCGAGGAAAATTTGCCCGCCACCAACACCCCCTTTCCTGCCGCATTCTATTGTGCAAAAGATTTCCCCGTGAAAACTGTGAACTCGCTGTGGGTGTGTGCTGTGAGTGGTTAAGCTCCCCGTGAAGAAGAAGCACTTTCCCTCCGGATTCCGATTTTCTCGACCGAATTTGTTCAATTTTCCAACCATGGCTTCGTACGGTTGTTGCGGTTGCGGTGTCTCGTGTTAAAAAAGGGGGTGGCAAAACAGATTTCCTTGCGGCATGGCACCACCAACAACGATGCAGGCGCGTGGCGTTCGCTCAAGGCAGCAGTTTTACGGTACTATGAAGCCTTCCGCTAGCGCACCGGACACCAGCCCGACGACGACAACGACAGCGACAGCAGCAGCAGCACCAATATCCATCGGCTTCCGACGAGCGGCCGCATCAGTAGTGGCAACAGAGCGAGCAGTGGCGGCCGCAGCCGTACTAGCAGCGCACGGCACGCGACATCCGGTCGCGCTGGAACAGTCCCCCCGTCCACGGCGGTGGCATCTTCTACCTCAGCGATCACCAACTCCAGCGCGCAGCACCGAGCGGCACCGAGTGCGCTACTTTCCATTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGTTTTGCTTGTTGTTGACGTGATTTAATCTATTCTCCCGCATCTAATGCAACTGACTGATGGTGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTATACACATACTTGCGAAACCCAATTGGCCCAAGGTGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTACGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTATTCNAG]

[+] EMBL AL933323             [CCGAGGTTAAAAACTTCTGCCACTGTCGTTGACCGTCGTCGTCATCAGTCGTCGCTGTCGTCGAGGAAAATTTGCCCGCCACCAACACCCCCTTTCCTGCCGCATTCTATTGTGCAAAAGATTTCCCCGTGAAAACTGTGAACTCGCTGTGGGTGTGTGCTGTGAGTGGTTAAGCTCCCCGTGAAGAAGAAGCACTTTCCCTCCGGATTCCGATTTTCTCGACCGAATTTGTTCAATTTTCCAACCATGGCTTCGTACGGTTGTTGCGGTTGCGGTGTCTCGTGTTAAAAAAGGGGGTGGCAAAACAGATTTCCTTGCGGCATGGCACCACCAACAACGATGCAGGCGCGTGGCGTTCGCTCAAGGCAGCAGTTTTACGGTACTATGAAGCCTTCCGCTAGCGCACCGGACACCAGCCCGACGACGACAACGACAGCGACAGCAGCAGCAGCACCAATATCCATCGGCTTCCGACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BX622048             [                                                                                                                                                                                                                                                                                                                                                                                                       CTTCCGCTAGCGCACCGGACACCAGCCCGACGACGACAACGACAGCGACAGCAGCAGCAGCACCAATATCCATCGGCTTCCGACGAGCGGCCGCATCAGTAGTGGCAACAGAGCGAGCAGTGGCGGCCGCAGCCGTACTAGCAGCGCACGGCACGCGACATCCGGTCGCGCTGGAACAGTCCCCCCGTCCACGGCGGTGGCATCTTCTACCTCAGCGATCACCAACTCCAGCGCGCAGCACCGAGCGGCACCGAGTGCGCTACTTTCCATTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGTTTTGCTTGTTGTTGACGTGATTTAATCTATTCTCCCGCATCTAATGCAACTGACTGATGGTGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTATACACATACTTGCGAAACCCAATTGGCCCAAGGTGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTACGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTATTCNAG]


>consensus_8863#1 CCGAGGTTAAAAACTTCTGCCACTGTCGTTGACCGTCGTCGTCATCAGTCGTCGCTGTCG TCGAGGAAAATTTGCCCGCCACCAACACCCCCTTTCCTGCCGCATTCTATTGTGCAAAAG ATTTCCCCGTGAAAACTGTGAACTCGCTGTGGGTGTGTGCTGTGAGTGGTTAAGCTCCCC GTGAAGAAGAAGCACTTTCCCTCCGGATTCCGATTTTCTCGACCGAATTTGTTCAATTTT CCAACCATGGCTTCGTACGGTTGTTGCGGTTGCGGTGTCTCGTGTTAAAAAAGGGGGTGG CAAAACAGATTTCCTTGCGGCATGGCACCACCAACAACGATGCAGGCGCGTGGCGTTCGC TCAAGGCAGCAGTTTTACGGTACTATGAAGCCTTCCGCTAGCGCACCGGACACCAGCCCG ACGACGACAACGACAGCGACAGCAGCAGCAGCACCAATATCCATCGGCTTCCGACGAGCG GCCGCATCAGTAGTGGCAACAGAGCGAGCAGTGGCGGCCGCAGCCGTACTAGCAGCGCAC GGCACGCGACATCCGGTCGCGCTGGAACAGTCCCCCCGTCCACGGCGGTGGCATCTTCTA CCTCAGCGATCACCAACTCCAGCGCGCAGCACCGAGCGGCACCGAGTGCGCTACTTTCCA TTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGTTTTG CTTGTTGTTGACGTGATTTAATCTATTCTCCCGCATCTAATGCAACTGACTGATGGTGTG CGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGC GTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTATACACATACTTG CGAAACCCAATTGGCCCAAGGTGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAG CATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTACGA GCATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTAT TCNAG



consensusID : consensus_8863#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 612
fasta sequence
                              [CGACATCCGGNCGCGCTGGAACAGTCCCCCCGTCCACGGNGGTGGCATCTTCTACCTCAGCGATCACCACCTCCAGCGCGCAGCACCGAGCGGCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATTCG-GTCCTGTTTTTACTGTTTTGCTTGTTTTGACGTGATTTAATCTAATCTCCCGCATCTAATGCAACTGACTGATGGTGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGCATACCCCATAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTACACACATACTTCCGAAACCCAATTGGCCCAAGGTGTTCGGCGGCAGCTACTAGGATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCGAGAGAGAGACAGTTGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGAA]

[+] EMBL BX622596             [CGACATCCGGNCGCGCTGGAACAGTCCCCCCGTCCACGGNGGTGGCATCTTCTACCTCAGCGATCACCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM643001             [      CCGGTCGCGCTGGAACAGTCCCCCCGTCCACGGCGGTGGCATCTTCTACCTCAGCGATCACCAACTCCAGCGCGCAGCACCGAGCGGCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATTCG GTCCTGTTTTTACTGTTTTGCTTGTTTTGACGTGATTTAATCTAATCTCCCGCATCTAATGCAACTGACTGATGGTGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGCATACCCCATAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTACACACATACTTCCGAAACCCAATTGGCCCAAGGTGTTCGGCGGCAGCTACTAGGATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCGAGAGAGAGACAGTTGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGAA]
[+] EMBL BX625396             [                                                                                                                                 TCCGCACTCTAGCCGTAGGGATTCGAGTCCTGTTTTTACTGTTTTGCTTGNTTNGACGTGATTTAATCTAATCTCCCGCATNTAATGCAACTGACTGANGGTGTGCNTCTGAGTGTGTGNTTGCCAAACGGATAACGCGAGNGTGCATACCC                                                                                                                                                                                                                                                                                                                                            ]


>consensus_8863#2 CGACATCCGGNCGCGCTGGAACAGTCCCCCCGTCCACGGNGGTGGCATCTTCTACCTCAG CGATCACCACCTCCAGCGCGCAGCACCGAGCGGCACCGAGTGCGTTACTTTCCATTTCGT TCCGTGCCCTCCGCACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGTTTTGCTTGTT TTGACGTGATTTAATCTAATCTCCCGCATCTAATGCAACTGACTGATGGTGTGCGTCTGA GTGTGTGCGTGCCAAAGGGATAACGCGAGTGTGCATACCCCATAAGTGAGTGCGTTGTTA GTATGCAAGCAAGAAAAAAGTGACACTTCCTCCACCCGTTACACACATACTTCCGAAACC CAATTGGCCCAAGGTGTTCGGCGGCAGCTACTAGGATCCTTAGCACAGGCGCACAGGTGT GTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGCATCACACCACACGCGCATGAGATA GAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCGAGAGAGAGACAGT TGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTG TTTACAAACGAA



consensusID : consensus_8863#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 336
fasta sequence
                              [CCCGAGTTAACGAGGTAGGGTGACGGAAGCACGCGCTGGACTATCTGCAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCTACCCCCGGATCGCAACGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGGCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGGCATGTTCATGCGGGACGAGCTGCCGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGG]

[+] EMBL AL697406             [CCCGAGTTAACGAGGTAGGGTGACGGAAGCACGCGCTGGACTATCTGCAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCTACCCCCGGATCGCAACGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGGCCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGGCATGTTCATGCGGGACGAGCTGCCGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGG]


>consensus_8863#3 CCCGAGTTAACGAGGTAGGGTGACGGAAGCACGCGCTGGACTATCTGCAGCAGCGCGAAT GCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTTCTACCCCCGGATCGCAACGAACA GTCCGGCATCAGTGGGGAAGCATTTCCGGCCCTCGTGTACATCGCGACGCCCAAGAACGA GCACTGGATCGGCGAGGAACCGTTGCTGGTGACGGCCCGCCAAATCGTCGAGTGCCGCGG CCGAGCGGCCACAACGTCGAGTACCTGGTGCGGCTGGCATGTTCATGCGGGACGAGCTGC CGGGCGCGTGCGACGAGCATTTGTTCGAGCTCGAGG



consensusID : consensus_8863#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 92
fasta sequence
                              [CACCTATTCAAGCGCGAGCGATAGAGAGAGAAAATTGCGCTTTCATCTACATCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGT]

[+] EMBL BX603215             [CACCTATTCAAGCGCGAGCGATAGAGAGAGAAAATTGCGCTTTCATCTACATCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGT]


>consensus_8863#4 CACCTATTCAAGCGCGAGCGATAGAGAGAGAAAATTGCGCTTTCATCTACATCTTGGTGA TCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      ACCCACGCGTCCGGAGCGGCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCGCCGC 60
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      ACTCTAGCCGTAGGGATTCGGTCCTGTTTTTACTGGTTTGCTTGTTTTGACGTGATTTAA 120
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      TCTAATCTCCCGCATCTAATGCAACTGACTGATGATGTGCGTCTGAGTGTGTGCGTGCCA 180
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      AAGGGATAACGCGAGTGTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCATGCAAGA 240
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      AAAAAGTGACACCTCCTCCACCCGTTACACACATACCTGCGAAACCCAATTGGTCCAAGG 300
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      TGTTCGGCAAACCACTCGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGTACA 360
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      GGTGTGTAGCCACGGGTTACGGGTTATCCAAGTGTGCGAGTATCACACCACACGCGCATG 420
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      --------------------CCGAGGTTAAAAACTTCTGCCACTGTCGTTGACCGTCGTC 40
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      AGATAGAAAAGTGCACAGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCGAGAGAGAG 480
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      GTCATCAGTCGTCGCTGTCGTCGAGGAAAATTTGCCCGCCACCAACACCCCCTTTCCTGC 100
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      ACAGTTGCGCTTTCATCCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTG 540
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      CGCATTCTATTGTGCAAAAGATTTCCCCGTGAAAACTGTGAACTCGCTGTGGGTGTGTGC 160
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      GTGTGTTTACAAACGAAAGAGTGGCCGCGATGGAGGTACAGAACGCGCCAACGACTGGTG 600
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      TGTGAGTGGTTAAGCTCCCCGTGAAGAAGAAGCACTTTCCCTCCGGATTCCGATTTTCTC 220
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      GCGGTGGTAGTACGCCCACTGTGTGGGTGTTCGGATATGGGTCCCTGTGCTGGTATCCGG 660
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      GACCGAATTTGTTCAATTTTCCAACCATGGCTTCGTACGGTTGTTGCGGTTGCGGTGTCT 280
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      GTTTCGAGTACACGGACTGCATTACCGGCTACATCCGCGGGTACGTGCGCCGGTTCTGGC 720
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      CGTGTTAAAAAAGGGGGTGGCAAAACAGATTTCCTTGCGGCATGGCACCACCAACAACGA 340
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      AGGGCAATGTGACGCACCGTGGGACCAAGGAGAAGCCGGGTCGCGTGGCCACTTTAATCG 780
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      TGCAGGCGCGTGGCGTTCGCTCAAGGCAGCAGTTTTACGGTACTATGAAGCCTTCCGCTA 400
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      AGGACAAAGAGGGTATCACATGGGGCTGTGCATTT-AGGGTGACCGGAAGCCACGCGCTG 839
consensus_8863#3      -------------------CCCGAGTTAACGAGGT-AGGGTGAC-GGAAGC-ACGCGCTG 38
                                                                                  

consensus_8863#1      GCGCACCGGACACCAGCCCGACGACGACAACGACAGCGACAGCAGCAGCAGCACCAATAT 460
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      GACTATCTG-CAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTT 898
consensus_8863#3      GACTATCTG-CAGCAGCGCGAATGCACCCTCGGCGGGTACGTGACCGAGTACATCAAGTT 97
                                                                                  

consensus_8863#1      CCATCGGCTTCCGACGAGCGGCCGCATCAGTAGTGGCAACAGAGCGAGCAGTGGCGGCCG 520
consensus_8863#2      ------------------------------------------------------------
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      CTATC----CCCGGATCGCAACCGAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCC 954
consensus_8863#3      CTACC----CCCGGATCGCAAC-GAACAGTCCGGCATCAGTGGGGAAGCATTTCCGGCCC 152
                                                                                  

consensus_8863#1      CAGCCGTACTAGCAGCGCACGGCACGCGACATCCGGTCGCGCTGGAACAGTCCCCCCGTC 580
consensus_8863#2      --------------------------CGACATCCGGNCGCGCTGGAACAGTCCCCCCGTC 34
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      TCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTG-GTG 1013
consensus_8863#3      TCGTGTACATCGCGACGCCCAAGAACGAGCACTGGATCGGCGAGGAACCGTTGCTG-GTG 211
                                                                                  

consensus_8863#1      CACGGCGGTGGCATCTTCTACCTCAGCGATC--ACCAACTCCAGCGCGCAGCACCGAGCG 638
consensus_8863#2      CACGGNGGTGGCATCTTCTACCTCAGCGATC--ACCACCTCCAGCGCGCAGCACCGAGCG 92
consensus_8863#4      ------------------------------C--ACCTATTCAAGCGCG-AGCGATAGAGA 27
consensus_8863#0      ACGGCCCGCCAAATCGTCGAGTGCCGCGGCCCGAGCGGCCACAACGTCGAGTACCTGGTG 1073
consensus_8863#3      ACGGCCCGCCAAATCGTCGAGTGCCGCGGCC-GAGCGGCCACAACGTCGAGTACCTGGTG 270
                                                    *  * *      * **   **         

consensus_8863#1      GCACCGAGTGCGCTACTTTCCATTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATT 698
consensus_8863#2      GCACCGAGTGCGTTACTTTCCATTTCGTTCCGTGCCCTCCGCACTCTAGCCGTAGGGATT 152
consensus_8863#4      GAGAAAATTGCGCTTTCATCTACATCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTT 87
consensus_8863#0      CGGCTGGCCATGTT------CATG-CGGGACGAGC-TGCCGGGCGCGTGCGACGAGCATT 1125
consensus_8863#3      CGGCTGGC-ATGTT------CATG-CGGGACGAGC-TGCCGGGCGCGTGCGACGAGCATT 321
                                 * *       *   *     *  *        *    **     *  **

consensus_8863#1      -CGGTCCTGTTTTTACTGTTTTGCTTGTTGTTGACGTGATTTAATCTATTCTCCCGCATC 757
consensus_8863#2      -CGGTCCTGTTTTTACTGTTTTGCTTGTT-TTGACGTGATTTAATCTAATCTCCCGCATC 210
consensus_8863#4      GTGGT------------------------------------------------------- 92
consensus_8863#0      -TGTTCGAGCTCGAGGGGCTCGTGCGCCGGTTCGTGGCGGAAGCGAACGTGCAGCTGGAG 1184
consensus_8863#3      -TGTTCGAGCTCGAGG-------------------------------------------- 336
                        * *                                                       

consensus_8863#1      TAATGCAACTGACTGATGGTGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGT 817
consensus_8863#2      TAATGCAACTGACTGATGGTGTGCGTCTGAGTGTGTGCGTGCCAAAGGGATAACGCGAGT 270
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      CTGCTGCTGGTCGGAAACGTTACACCTCACCGGATCCGGCGCGATACGCATGAGGAGGTG 1244
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      GTGAATACCCATTAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCC 877
consensus_8863#2      GTGCATACCCCATAAGTGAGTGCGTTGTTAGTATGCAAGCAAGAAAAAAGTGACACTTCC 330
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      CGGCGCCACGTCACGTTCGAGTACACGTCGCGCGTTCCCGATACCAAGCTGCGCTGTTTG 1304
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      TCCACCCGTTATACACATACTTGCGAAACCCAATTGGCCCAAGGTGTTCGGCAAACCACT 937
consensus_8863#2      TCCACCCGTTACACACATACTTCCGAAACCCAATTGGCCCAAGGTGTTCGGC-------- 382
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      CACATCTAAACCTCCTCCTCCCCCGCCCCGCGGTCCTGTCCGATACTCATTGAACGCCAT 1364
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      CGCAGGACGGCGGCAGCTACTAGCATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGG 997
consensus_8863#2      -----------GGCAGCTACTAGGATCCTTAGCACAGGCGCACAGGTGTGTAGCCACGGG 431
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      TTAATTAGTACTTTGCTTTAAAGTTCTTTTCTACGAAACGCACAAAGAGAAGCACCACAC 1424
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      TTACGGGTTATCCAAGTGTACGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCAC 1057
consensus_8863#2      TTACGGGTTATCCAAGTGTGCGAGCATCACACCACACGCGCATGAGATAGAAAAGTGCAC 491
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      ACACGCGCGCGTGTGAATCCGATTGGTGGGTGTGCGTGTGTGTGTGAGCGTGTTTCCTTT 1484
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      AGCCTAGTCATCAAAACACCTATTCNAG-------------------------------- 1085
consensus_8863#2      AGCCTAGTCATCAAAACACCTTCGCAAGCGCGAGCGAGAGAGAGACAGTTGCGCTTTCAT 551
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      TTTACAATACAAAACAAACAAAAATCCCTAGCCTTAAGACTGCTACCACTGAACGCTACT 1544
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      ------------------------------------------------------------
consensus_8863#2      CCGCACCTTGGTGATCCTCGTCGCCTTGGGCTGTGTGGTTTGTGGTGTGTTTACAAACGA 611
consensus_8863#4      ------------------------------------------------------------
consensus_8863#0      ACTATTACTACTACAGTTGACTATAAAGTGTTTTATGTTATAATGAAATATAGAG----- 1599
consensus_8863#3      ------------------------------------------------------------
                                                                                  

consensus_8863#1      -
consensus_8863#2      A 612
consensus_8863#4      -
consensus_8863#0      -
consensus_8863#3      -
                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)