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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8870#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1154 fasta sequence
[AGAAGTAAAAAACAAATCTAGGCGAAGGCAAGGCGCAGTAAACGAAGGCTGAACAAGAGAAAACTACAATGCAAAAATATCTAGCAAAAAACGGTAAAACAAAAAGACAGAAACATATAAGAAGACAACATTTGTGGTTCCTATAATGTAGTGCGCTTTTCCCACAGTGAAAGAGCATCTGCAGACATTCAAAACACACAAACACACACTAGCAATCACACATGTACACAAACACACGCTCCTACAAGAACTGTGTGCCACATTTGTGCACAAGCACAAGCGTGTACGAGTGTTGTGTGCGCGTGTGTTTGCTCGTGCAACAAAGAATCCGCGGGAAAGGCCTTCAAATTTATCCACTCTCCGTATGTAGCAGCACCAGAAACAAAACAAACAAATTAGCAAACAAACAAAAAAACAGAAATGCTTTGAAGACGGCCAGAATATATACAATGCTACCTTACATGTGAGGTATTTTTTCGCGAATCATTATTCGGGCGTTCAAAAGCACTTCCTAATGCATTTAGATGAAAACAAAAGTTGAAAACAAAAAGCAAGACACCTACACGGCAAACCTCAAAATTTACCAATTTTTAGTATATTTAAGGAAAAGTAAAAAAACAAAGAACAAACAAAGCAAACCAAAAACTGAAAGCACACAAATTCTCAAGTGCTGCCCGAAAAAATCGCCAACAACGGCTCTCGAAAAGATAAAANACAAAGAGCATGAAATGAGAAATGGAAAGTGAAGATACTGTTTTAGGAGAAAAAAAACCTGGACTTGAAGCTGCAAAGCGGAAGCGGAAACCCCGTTCCGGAAGAGACAAAAAACAACAATTGACGAATCAATGCGGCGTTTCTGATCATGACAACACAAGAGAGATGTAAACTGTATTGCGTATCGGTCGAATCGGCGGTATCTAATTTACAATCGGCGTCTTACATTAGATGTACAGTTTTCGGGTTGGGCTGTGTTTTAGAGCCTGCCAGCCAGCCAGAGCCAGCCTTCTCCTTTTATGCTTCACCCATCCAAATGACGTAGCGTCAGTCGTCGTGGGCAGTATGAAAACCAAAGTCGTGGGAGCTATAATTGTGGGATGTACCGCGAGCCGGTAAGAANGGTTTCGCGGTTCTTCAGTTCTGTATAGCTAGTTATT]
[+] EMBL BX613488 [AGAAGTAAAAAACAAATCTAGGCGAAGGCAAGGCGCAGTAAACGAAGGCTGAACAAGAGAAAACTACAATGCAAAAATATCTAGCAAAAAACGGTAAAACAAAAAGACAGAAACATATAAGAAGACAACATTTGTGGTTCCTATAATGTAGTGCGCTTTTCCCACAGTGAAAGAGCATCTGCAGACATTCAAAACACACAAACACACACTAGCAATCACACATGTACACAAACACACGCTCCTACAAGAACTGTGTGCCACATTTGTGCACAAGCACAAGCGTGTACGAGTGTTGTGTGCGCGTGTGTTTGCTCGTGCAACAAAGAATCCGCGGGAAAGGCCTTCAAATTTATCCACTCTCCGTATGTAGCAGCACCAGAAACAAAACAAACAAATTAGCAAACAAACAAAAAAACAGAAATGCTTTGAAGACGGCCAGAATATATACAATGCTACCTTACATGTGAGGTATTTTTTCGCGAATCATTATTCGGGCGTTCAAAAGCACTTCCTAATGCATTTAGATGAAAACAAAAGTTGAAAACAAAAAGCAAGACACCTACACGGCAAACCTCAAAATTTACCAATTTTTAGTATATTTAAGGAAAAGTAAAAAAACAAAGAACAAAC ]
[+] EMBL BX622449 [ TCCTAATGCATTTAGATGAAAACAAAAGATGAAAACAAAAAGCAAGACACCTACACGGCAAACCTCAAAATTTACCAATTTTTAGTATATTTAAGGAAAAGTAAAAAAACAAAGAACAAACAAAGCAAACCAAAAACTGAAAGCACACAAATTCTCAAGTGCTGCCCGAAAAAATCGCCAACAACGGCTCTCGAAAAGATAAAANACAAAGAGCATGAAATGAGAAATGGAAAGTGAAGATACTGTTTTAGGAGAAAAAAAACCTGGACTTGAAGCTGCAAAGCGGAAGCGGAAACCCCGTTCCGGAAGAGACAAAAAACAACAATTGACGAATCAATGCGGCGTTTCTGATCATGACAACACAAGAGAGATGTAAACTGTATTGCGTATCGGTCGAATCGGCGGTATCTAATTTACAATCGGCGTCTTACATTAGATGTACAGTTTTCGGGTTGGGCTGTGTTTTAGAGCCTGCCAGCCAGCCAGAGCCAGCCTTCTCCTTTTATGCTTCACCCATCCAAATGACGTAGCGTCAGTCGTCGTGGGCAGTATGAAAACCAAAGTCGTGGGAGCTATAATTGTGGGATGTACCGCGAGCCGGTAAGAANGGTTTCGCGGTTCTTCAGTTCTGTATAGCTAGTTATT]
[+] EMBL BX629094 [ TGAAAACNAAAAGCAAGACACCTACACGGCAAACCTCAAAATTTANCAATTTTTAGTATATTTAAGGAAAAGTAA ]
consensusID : consensus_8870#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1127 fasta sequence
[TTTTTGTAAACAAACTAAACTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAGGCGAGATGAAGCTAAGGCAGCTGAGGAGGAAAAGGAACGATTACGCCGTGTAGCGCTA-CCGATCAGGAGGCACGGATCAATTTGCTTCGCCAGAAGGCCCGAACCGGTTCAGATAAACCGATAGAGTCCGAAACCGAGGTTCGCGTAACGGCCAAAGAGCACGTTAACTTTTTCAGCGAACTCGAGGAAGGAAAACACGACGGTGTCAAGCGATCGAACGCGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTATCTGA-CCTATCTGGGGCAGGATACGAACGAAGCGCTCGGCAA-GCG-GGACTGGTACGATACGGCCCCAAAACGTGCGGAAAGCCTCGATGAACACGGAAAGCCGA-TAGA-AGTTGGTTTAAAAACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTCAAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACTTCTCCGGCAGTACAATCGAAGCCCCAATATGCAGCACTGATTGAGCACACG-GGTCGTAAAGAATCAAGAAAGCGAAAGTTAAGTTCGAGCTCTTCAGATACATCACGCCATTCGAAGAAAAGAAAAAAG-AAAC-ATAAGAAGCACAGCGATAAGAAGAAGAAAAAGGAAAAGCGGGAGAAAAAGAAACATAAGAAATCCAGTTCGGACGAGGACGAAAGTACCGAGGACGAAGAGGTCGCGAAGGCAAAGAAGGCACAGCTAGAACAGATGCGGAAGCAGCGAA-TTGCGCGGGAGCGAGAGGAGAAGGAAAGGACGGAGAAGATGCTTGCTAAACTGCGTGGTGAACCGGATCCACCTCCCAAGACACCGAAGGAAGTAGTGCCACAGCATTCGGTGCCTCGTCAGAAGTACAATTCACAGTTCAATCCCGAAC-TGGCAAAG-CAAAATTACGAATAAACCGCTACTCAAGATTCTGTCTTTGTA]
[+] EMBL AGA280024 [TTTTTGTAAACAAACTAAACTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAGGCGAGATGAAGCTAAAGCAGCTGAGGAGGAAAAGGAACGATTACGCCGTGTAGCGCTAGCCGATCAGGAGGCACGGATCAATTTGCTTCGCCAGAAGGCCCGAACCGGTTCAGATAAACCGACAGAGTCCGAAACCGAGGTTCGCGTAACGGCCAAAGAGCACGTTAACTTTTTCAGCGAACTCGATGAAGGAAAACACGACGGTGTCAAGCGATCGAACGCGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTATCTGACCCTATCTGGGGCAAGATACGAACGAAGCGCTCGGCAA GCG GGACTGGTACGATACCGCCCCAAAACG ]
[+] EMBL CNS08GGR [ TAAAAAAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAGGCGAGATGAAGCTAAGGCAGCTGAGGAGGAAAAGGAACGATTACGCCGTGTAGCGCTA CCGATCAGGAGGCACGGATCAATTTGCTTCGCCAGAAGGCCCGAACCGGTTCAGATAAACCGATAGAGTCCGAAACCGAGGTTCGCGTAACGGCCAAAGAGCACGTTAACTTTTTCAGCGAACTCGAGGAAGGAAAACACGACGGTGTCAAGCGATCGAACGCGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTATCTGA CCTATCTGGGGCAGGATACGAACGAAGCGCTCGGCAA GCG GGACTGGTACGATACGGCCCCAAAACGTGCGGAAAGCCTCGATGAACACGGAAAGCCGA TAGA AGTTGGTTTAAAAACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTAACGAGTGCAAGTTTCAAACTAAACTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACTTCTCCGGCAGTACAATCGAAGCCCCAATATGCAGCACTGATTGAGCACACG GGTCGTAAAGAATCAAGAAAGCGAAAGTTAAGTTCGAGCTCTTCAGATACATCACGCCATTCGAAGAAAAGAAAAAAG AAAC ATAAGAAGCACAGCGATAAGAAGAAGAAAAAGGAAAAGCGGGAGAAAAAGAAACATAAGAAATCCAGTTCGGACGAGGACGAAAGTACCGAGGACGAAGAGGTCGCGAAGGCAAAGAAGGCACAGCTAGAACAGATGCGGAAGCAGCGAA TTGCGCGGGA CAAGAGGAGAAGGAAAGGACGGAGAAGATGCTTGCT ]
[+] EMBL BM623838 [ ccgACTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAGGCGAGATGAAGCTAAGGCAGCTGAGGAGGAAAAGGAACGATTACGCCGTGTAGCGCTAGCCGATCAGGAGGCACGGATCAATTTGCTTCGCCAGAAGGCCCGAACCGGTTCAGATAAACCGATAGAGTCCGAAACCGAGGTTCGCGTAACGGCCAAAGAGCACGTTAACTTTTTCAGCGAACTCGAGGAAGGAAAACACGACGGTGTCAAGCGATCGAACGCGGAACACGAGAAGGAAAAGAAAGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTATCTGA CCTATCTGGGGCAGGATACGAACGAAGCGCTCGGCAA GCG GGACTGGTACGATACGGCCCCAAAACGTGCCGAAAGCCTCGATGAACACGGAAAGCCGA TAGA AGTTGGTTTAAAAACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTCAAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACCTCTCCGGCAGTACAATCGAAGACCCAATATACAGCACTGATTGGGCAAAC ]
[-] EMBL CNS08GGS [ gTTCGCCAGTAGGCCCGAACCGGTTCAGATAAACCGATAGAGTCCGAAACCGAGGTTCGCGTAACGGCCAAAGAGCACGTTAACTTTTTCAGCGAACTCGAGGAAGGAAAACACGACGTTTTCAAGCGATCGAACGCGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTTTCTGA CCTTTCTGGGGCAGGATACGAACGAAGCGCTCGGCAA GCG GAACTGGTACGATACGGCCCCAAAACGTGCGGAAAGCCTCGATGAACACGGAAAGCCGA TAGA AGTTGGTTTAAAAACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTCAAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACTTCTCCGGCAGTACAATCGAAGCCCCAATATGCAGCACTGATTGAGCACACGTGGTCGTAAAGAATCAAGAAAGCGAAAGTTAAGTTCGAGCTCTTCAGATACATCACGCCATTCGAAGAAAAGAAAAAAG AAAC ATAAGAAGCACAGCGATAAGAAGAAGAAAAAGGAAAAGCGGGAGAAAAAGAAACATAAGAAATCCAGTTCGGACGAGGACGAAAGTACCGAGGACGAAGAGGTCGCGAAGGCAAAGAAGGCACAGCTAGAACAGATGCGGAAGCAGCGAA TTGCGCGGGAGCGAGAGGAGAAGGAAAGGACGGAGAAGATGCTTGCTAAACTGCGTGGTGAACCGGATCCACCTCCCAAGACACCGAAGGAAGTAGTGCCACAGCATTCGGTGCCTCGTCAGAAGTACAATTCACAGTTCAATCCCGAAC TGGCAAAG CAAAATTACGAATAAACCGCTACTCAAGATTCTGTCTTTGTA]
[-] EMBL AGA281720 [ GTAACGGCCAAAGAGCACGTTAACTTTTTCAGCGAACTCGATGAAGGAAAACACGACGGTGTCAAGCGATCGAACGCGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTATCTGA CCTATCTGGGGCAGGATACGAACGAAGCGCTCGGCAA GCG GGACTGGTACGATACGGCCCCAAAACGTGCGGAAAGCCTCGATGAACACGGTAAGCCGA TAGA AGTTGGTTTAAAAACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTTAAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACCTCTCCGACAGTACAATCGAAGACCCAATATACAGCACTGATTGGGCAAACG GATCGTAAAGAATCAAGAAAGCGAAAG ]
[-] EMBL CNS09O9A [ GGAAAAGTACGAAAAACAGATTGGCTATCTGA CCTATCTGGGGCAGGATACGAACGAAGCGCTCGGCAA GCG GGAATGGTACGATACGGCCCCAAAACGTGCGGAAAGCCTCGATGAACACGGAAAGCCGA TAGA AGTTGGTTTAAAAACGAAAAAATATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTCAAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACTTCTCCGGCAGTACAATCGAAGCCCCAATATGCAGCACTGATTGAGCACACG GGTCGTAAAGAATCAAGAAAGCGAAAGTTAAGTTCGAGCTCTTCAGATACATCACGCCATTCGAAGAAAAGAAAAAAGAAAACAATAAGAAGCACAGCGATAAGAAGAAGAAAAAGGAAAAGCGGAAGAAAAAGAAACATAAGAAATCCAGTTCGGACGAGGACGAAAGTACCGAGGACGAAGAGGTCGCGAAGGCAAAGAAGGCACAGCTAGAACAGATGCGGAAGCAGCGAA TTGCGCGGGAGCGAGAGGAGAAGGAAAGGACGGAGAAGATGCTTGCTAAACTGCGTGGTGAACCGGATCCACCTCCCAAGACACCGAAGGAAGTAGTGCCACAGCATTCGGTGCCTCGTCAGAAGTACAATTCACAGTTAAATCCCGAACGTGGCAAAGACAAAATTACGAATAAACCGCTACTCAAG ]
[+] EMBL CNS09O99 [ CAATGCGTGGACTGGTACGATACGGCCCCAAAACGTGCGGAAAGCCTCGATGAACACGGAAAGCCGATTAGATAGTTGGTTTAAAAACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTCAAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGACACTTCTCCGGCAGTACAATCGAAGCCCCAATATGCAGCACTGATTGAGCACACG GGTCGTAAAGAATCAAGAAAGCGAAAGTTAAGTTCGAGCTCTTCAGATACATCACGCCATTCGAAGAAAAGAAAAAAG AAAC ATAAGAAGCACAGCGATAAGAAGAAGAAAAAGGAAAAGCGGAAGAAAAAGAAACATAAGAAATCCAGTTCGGACGAGGACGAAAGTACCGAGGACGAAGAGGTCGCGAAGGCAAAGAAGGCACAGCTAGAACAGATGCGGAA CAGCGAATTTGCGCGGGAGC ]
consensusID : consensus_8870#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 821 fasta sequence
[GAATCGGCCACGAGGTTNTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAGGCGAGATGAAGCTAAGGCAGCTGAGGAGGGAAAGAGAAAACAAAACGAGTGAGCAAAAGAAGAGAAACACGGTAAAGAGACTATATTATTTAAAACAAAGAAGTAAAAAAACAAATCTAGGCGAAGGCAAGGCGCAGTAAACGAAGGCTGAACAAGAGAAAACTACAATGCAAAAATATCTAGCAAAAAACGGTAAAACAAAAAGACAGAAACATATAAGAAGACAACATTTGTGGTTCCTATAATGTAGTGCGCTTTTCCCACAGTGAAAGAGCATCTGCAGACATTCAAAACACACAAACACACACTAGCAATCACACATGTACACAAACACACGCTCCTACAAGAACTGTGTGCCACATTTGTGCACAAGCACAAGCGTGTACGAGTGTTGTGTGCGCGTGTGTTTGCTCGTGCGCGTGCAAGCAAAGAATCCGCGGGAAAGGCCTTCAAATTTATCCACTCTCCGGTATGTAGCAGCACCAGAAACAAAACGAAACCAAAGATTAAGCAAAAGCAAAACCACANAAAACACCCAGAAAANTGCCTTTNTGAAAAGACCGGGCCAGNGAAATATATAACCAAATGGCTAACCNTTAACAATGGTTGAAGGTTAACTATNATATCCGCAGAAATCACCTNATTACCNGGCNGTTCAAAAAANCCACCTTTCCTACTTGCCCATTTCACAATTCACAACA]
[+] EMBL BX469475 [GAATCGGCCACGAGGTTNTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAGGCGAGATGAAGCTAAGGCAGCTGAGGAGGGAAAGAGAAAACAAAACGAGTGAGCAAAAGAAGAGAAACACGGTAAAGAGACTATATTATTTAAAACAAAGAAGTAAAAAAACAAATCTAGGCGAAGGCAAGGCGCAGTAAACGAAGGCTGAACAAGAGAAAACTACAATGCAAAAATATCTAGCAAAAAACGGTAAAACAAAAAGACAGAAACATATAAGAAGACAACATTTGTGGTTCCTATAATGTAGTGCGCTTTTCCCACAGTGAAAGAGCATCTGCAGACATTCAAAACACACAAACACACACTAGCAATCACACATGTACACAAACACACGCTCCTACAAGAACTGTGTGCCACATTTGTGCACAAGCACAAGCGTGTACGAGTGTTGTGTGCGCGTGTGTTTGCTCGTGCGCGTGCAAGCAAAGAATCCGCGGGAAAGGCCTTCAAATTTATCCACTCTCCGGTATGTAGCAGCACCAGAAACAAAACGAAACCAAAGATTAAGCAAAAGCAAAACCACANAAAACACCCAGAAAANTGCCTTTNTGAAAAGACCGGGCCAGNGAAATATATAACCAAATGGCTAACCNTTAACAATGGTTGAAGGTTAACTATNATATCCGCAGAAATCACCTNATTACCNGGCNGTTCAAAAAANCCACCTTTCCTACTTGCCCATTTCACAATTCACAACA]
consensusID : consensus_8870#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 427 fasta sequence
[AGCAGACGCGGGAGAAAACAGAGAACACGACAGCCGGCGCCACAAAAGAAGAAGAAGAAGAAGAGGAAGAGGGGGCCAAAAAAGAGAGGGCACGGGCGCACCAAAGACAACAGGGCGCGGGGCAGGCGAGAGGAAGCGAAGGCAGCGGAGGAGGAAAAGGAACGAGGACGCCGGGGAGCGCGACCGAGCAGGAGGCACGGAGCAAGGGGCGGCGCCAGAAGGCCCGAACCGGGGCAGAGAAACCGAGGGAGCGCCGAAACCGAGGGGCGCGCGAACGGCCAAAGAGCACGGGAACGGGGGCAGCGAACGCGAGGAAGGAAAACACGACGGGGGCAAGCGCAGCGAACGCGGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGGACGAAAAACAGAGGGGCGAGCGGACCGAGCGGGGGCAGG]
[+] EMBL CNS09HZK [AGCAGACGCGGGAGAAAACAGAGAACACGACAGCCGGCGCCACAAAAGAAGAAGAAGAAGAAGAGGAAGAGGGGGCCAAAAAAGAGAGGGCACGGGCGCACCAAAGACAACAGGGCGCGGGGCAGGCGAGAGGAAGCGAAGGCAGCGGAGGAGGAAAAGGAACGAGGACGCCGGGGAGCGCGACCGAGCAGGAGGCACGGAGCAAGGGGCGGCGCCAGAAGGCCCGAACCGGGGCAGAGAAACCGAGGGAGCGCCGAAACCGAGGGGCGCGCGAACGGCCAAAGAGCACGGGAACGGGGGCAGCGAACGCGAGGAAGGAAAACACGACGGGGGCAAGCGCAGCGAACGCGGGAACACGAGAAGGAAAAGAAGGAGGAGCAGGAAAAGGACGAAAAACAGAGGGGCGAGCGGACCGAGCGGGGGCAGG]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8870#1 ------------------------------------------------------------
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 ------------------------------------------------------------
consensus_8870#2 GAATCGGCCACGAGGTTNTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAAT 60
consensus_8870#1 ------------------------------------------------------------
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 ------------------------------------------------------------
consensus_8870#2 GAATATTTTGCCAAAAAAGAGATGGCACGTTCGCACCAAAGACAACATTGCTCGTGTCAG 120
consensus_8870#1 ------------------------------------------------------------
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 ------------------------------------------------------------
consensus_8870#2 GCGAGATGAAGCTAAGGCAGCTGAGGAGGGAAAGAGAAAACAAAACGAGTGAGCAAAAGA 180
consensus_8870#1 ---------------------------------------------------TTTTTGTAA 9
consensus_8870#3 -----------------------------------------------AGCAGACGCGGGA 13
consensus_8870#0 --------------------------------------AGAAGTAAAAAA-CAAATCTAG 21
consensus_8870#2 AGAGAAACACGGTAAAGAGACTATATTATTTAAAACAAAGAAGTAAAAAAACAAATCTAG 240
consensus_8870#1 ACAAACTAAACTAATTCCAGCCATTCGCACGGGCAGCAAAAATTCTGCAAAATGAATATT 69
consensus_8870#3 GAAAACAGAGAACACGACAGCCGGCGCCACAAA-AGAAGAAGAAGAAGAAGAGGAAGAGG 72
consensus_8870#0 GCGAAGGCAAGGCGCAGTAAACGAAGGCTGAACAAGAGAAAACTACAATGCAAAAATATC 81
consensus_8870#2 GCGAAGGCAAGGCGCAGTAAACGAAGGCTGAACAAGAGAAAACTACAATGCAAAAATATC 300
** * * * * ** ** * ** *
consensus_8870#1 TTGCCAAAAAAGAGATGGCA------CGTTCGCACCAAAGACAACATTGCTCGTGTCAGG 123
consensus_8870#3 GGGCCAAAAAAGAGAGGGCA------CGGGCGCACCAAAGACAACAGGGCGCGGGGCAGG 126
consensus_8870#0 TAGCAAAAAACGGTAAAACAAAAAGACAGAAACATATAAGAAGACAACATTTGTGGTTCC 141
consensus_8870#2 TAGCAAAAAACGGTAAAACAAAAAGACAGAAACATATAAGAAGACAACATTTGTGGTTCC 360
** ***** * * ** * ** **** *** * *
consensus_8870#1 CGAGATGAAGCTAAGGCAGCTGAGGAGGAAAAGGAACGATTACGCCGTGTAGCGCTACCG 183
consensus_8870#3 CGAGAGGAAGCGAAGGCAGCGGAGGAGGAAAAGGAACGAGGACGCCGGGGAGCGCGACCG 186
consensus_8870#0 TATAATGTAGTGCGCTTTTCCCACAGTGAAAGAGCATCTGCA-GACATTCAAAACACACA 200
consensus_8870#2 TATAATGTAGTGCGCTTTTCCCACAGTGAAAGAGCATCTGCA-GACATTCAAAACACACA 419
* * ** * * **** * * * * * * * *
consensus_8870#1 ATCAGGAGGCACGGATCA---ATTTGCTTCGCCAGAAGGCCCGAACCGGTTCAGATAAAC 240
consensus_8870#3 AGCAGGAGGCACGGAGCA---AGGGGCGGCGCCAGAAGGCCCGAACCGGGGCAGAGAAAC 243
consensus_8870#0 AACACACACTAGCAATCACACATGTACACAAACACACGCTCCTACAAGAACTGTGTGCCA 260
consensus_8870#2 AACACACACTAGCAATCACACATGTACACAAACACACGCTCCTACAAGAACTGTGTGCCA 479
* ** * * ** * * ** * * ** * *
consensus_8870#1 CGATAGAGT-CCGAAACCGAGGTTCGCGT-AACGGCCAAAGAGCACGTTAACTTTTTC-- 296
consensus_8870#3 CGAGGGAGCGCCGAAACCGAGGGGCGCGCGAACGGCCAAAGAGCACGGGAACGGGGGC-- 301
consensus_8870#0 CATTTGTGCACAAGCACAAGCGTGTACGAGTGTTGTGTGCGCGTGTGTTTGCTCGTGC-- 318
consensus_8870#2 CATTTGTGCACAAGCACAAGCGTGTACGAGTGTTGTGTGCGCGTGTGTTTGCTCGTGCGC 539
* * * * ** * ** * * * * * *
consensus_8870#1 --------AGCGAACTCGAGGAAGGAAAACACGACGGTGTCAAGCG-ATCGAACGCGG-A 346
consensus_8870#3 --------AGCGAACGCGAGGAAGGAAAACACGACGGGGGCAAGCGCAGCGAACGCGGGA 353
consensus_8870#0 -----AACAAAGAATCCGCGGGAAAGGCCTTCAAATTTATCCACTCTCCG-TATGTAGCA 372
consensus_8870#2 GTGCAAGCAAAGAATCCGCGGGAAAGGCCTTCAAATTTATCCACTCTCCGGTATGTAGCA 599
* *** ** ** * * * * * * * * *
consensus_8870#1 ACACGAGAAGGAAAAG---AAGGAGGAGCAGGAAAAGTACGAAAAACAGATTGGCTATCT 403
consensus_8870#3 ACACGAGAAGGAAAAG---AAGGAGGAGCAGGAAAAGGACGAAAAACAGAGGGGCGAGCG 410
consensus_8870#0 GCACCAGAAACAAAAC-AAACAAATTAGCAAACAAA--CAAAAAAACAGAAA-TGCTTTG 428
consensus_8870#2 GCACCAGAAACAAAACGAAACCAAAGATTAAGCAAAAGCAAAACCACANAAAACACCCAG 659
*** **** **** * * * * *** ** *** *
consensus_8870#1 GACCTATCTGGGGCAGGATACGAACGAAGCGCTCGGCAAGCGGGACTGGTACGATACGGC 463
consensus_8870#3 GACCGAGCGGGGGCAGG------------------------------------------- 427
consensus_8870#0 AAGACGGCCAGAATATATACAATGCTACCTTACATGTGAGGTATTTTTTCGCGAATCATT 488
consensus_8870#2 AAAANTGCCTTTNTGAAAAGACCGG-GCCAGNGAAATATATAACCAAATGGCTAACCNTT 718
* *
consensus_8870#1 CCCAAAACGTGCGGAAAG--CCTCGATGAACACGGAAAGCCGATAGAAGTTGGTTTAAAA 521
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 ATTCGGGCGTTCAAAAGCACTTCCTAATGCATTTAGATGAAAACAAAAGTTGAAAACAAA 548
consensus_8870#2 AAC--AATGGTTGAAGGT--TAACTATNATATCCGCA-GAAATCACCTNATTACCNGGCN 773
consensus_8870#1 ACGAAAAACTATCATGATCCCCTGAACGTTATTCGACGGTACGTACCGAGTGCAAGTTTC 581
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 AAGCAAGACACCTACACGGCAAACCTCAAAATTTACCAATTTTTAGTATATTTAAGGAAA 608
consensus_8870#2 GTTCAAAAAANCCACCTTTCCTACTTGCCCATTTCACAATTCACAACA------------ 821
consensus_8870#1 AAACTACCCTCGGCTACCTCAGTCTCTAGGCACGCGGAACCGAGCGTTCCATGTCCGGAC 641
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 AGTAAAAAAACAAAGAACAAACAAAGCAAACCAAAAACTGAAAGCACACAAATTCTCAAG 668
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 ACTTCTCCGGCAGTACAATCGAAGCCCCAATATGCAGCACTGATTGAGCACACGGGTCGT 701
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 TGCTGCCCGAAAAAATCGCCAACAACGGCTCTCGAAAAGATAAAANACAAAGAGCATGAA 728
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 AAAGAATCAAGAAAGCGAAAGTTAAGTTCGAGCTCTTCAGATACATCACGCCATTCGAAG 761
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 ATGAGAAATGGAAAGTGAAGATACTGTTTTAGGAGAAAAAAAACCTGG----ACTTGAAG 784
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 AAAAGAAAAAAGAAACATAAGAAGCACAGCGATAAGAAGAAGAAAAAGGAAAAGCGGGAG 821
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 CTGCAAAGCGGAAGCGGAAACCCCGTTCCGGAAGAGACAAAAAACAACAATTGACGAATC 844
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 AAAAAGAAACATAAGAAATCCAGTTCGGACGAGGACGAAAGTACCGAGGACGAAGAGGTC 881
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 AATGCGGCGTTTCTGATCATGACAACACAAGAGAGATGTAAACTGTATTGCGTATCGGTC 904
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 GCGAAGGCAAAGAAGGCACAGCTAGAACAGATGCGGAAGCAGCGAATTGCGCGGGAGCGA 941
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 GAATCGGCGGTATCTAATTTACAATCGGCGTCTTACATTAGATGTACAGTTTTCGGGTTG 964
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 GAGGAGAAGGAAAGGACGGAGAAGATGCTTGCTAAACTGCGTGGTGAACCGGATCCACCT 1001
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 GGCTGTGTTTTAGAGCCTGCCAGCCAGCCAGAGCCAGCCTTCTCCTTTTATGCTTCACCC 1024
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 CCCAAGACACCGAAGGAAGTAGTGCCACAGCATTCGGTGCCTCGTCAGAAGTACAATTCA 1061
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 ATCCAAATGACGTAGCGTCAGTCGTCGTGGGCAGTATGAAAACCAAAGTCGTGGGAGCTA 1084
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 CAGTTCAATCCCGAACTGGCAAAGCAAAATTACGAATAAACCGCTACTCAAGATTCTGTC 1121
consensus_8870#3 ------------------------------------------------------------
consensus_8870#0 TAATTGTGGGATGTACCGCGAGCCGGTAAGAANGGTTTCGCGGTTCTTCAGTTCTGTATA 1144
consensus_8870#2 ------------------------------------------------------------
consensus_8870#1 TTTGTA---- 1127
consensus_8870#3 ----------
consensus_8870#0 GCTAGTTATT 1154
consensus_8870#2 ----------
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||