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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8876#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1066 fasta sequence
[CCGCCGGTACGCCTCGATCAACACGCACCTGGGCATCGAGCAGTCGCGCCGGGACGATCTCGAGTCGCTCGGGTACGTGCTGATGTACTTCAACCTCGGCACGCTGCCCTGGCAGGGGCTGAAGGCGGCCAACAAGCGCCAGAAGTACGAGCGGATCTCGGAGAAGAAGCTGTCCACGCCGGTCGAGGAGCTGTGCAACGGGTACCCGCGCGAGTTCAGCCTCTATCTCGCGTACTGCCGCCACATGGACTTCATCCAGCGGCCGGACTACTGCTATCTGCGCAAGCTGTTCCGCACGCTCTTCCACCGGCAGGGCTTCGTGTACGATTACGTGTTCGACTGGAATATGCTCAAGTTCGGGCGGCCGAACCTGAACGCGTTCACCAGCATGAAGCGTGGCCAGAGCCGGACACCCAGTGCCACCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACCGCGCTCGTCAGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGTGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGCGGACCACAAACGCTCGGCGGCCAGCCGTCGGCGCACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTGGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGA]
[+] EMBL BM619130 [CCGCCGGTACGCCTCGATCAACACGCACCTGGGCATCGAGCAGTCGCGCCGGGACGATCTCGAGTCGCTCGGGTACGTGCTGATGTACTTCAACCTCGGCACGCTGCCCTGGCAGGGGCTGAAGGCGGCCAACAAGCGCCAGAAGTACGAGCGGATCTCGGAGAAGAAGCTGTCCACGCCGGTCGAGGAGCTGTGCAACGGGTACCCGCGCGAGTTCAGCCTCTATCTCGCGTACTGCCGCCACATGGACTTCATCCAGCGGCCGGACTACTGCTATCTGCGCAAGCTGTTCCGCACGCTCTTCCACCGGCAGGGCTTCGTGTACGATTACGTGTTCGACTGGAATATGCTCAAGTTCGGGCGGCCGAACCTGAACGCGTTCACCAGCATGAAGCGTGGCCAGAGCCGGACACCCAGTGCCACCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACC ]
[+] EMBL BM584025 [ CCGCCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACACCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACCGCGCTCGTCAGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGTGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGCGGACCACAAACGCTCGGCGGCCAGCCGTCGGCGCACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTGGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGA]
[+] EMBL BX604303 [ AGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCAGCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGTAACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAACAGCGTCAACAATGCCAACAACAGCAGCAGCGTCGGTACCGCGCTCGTCGGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGGGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTAGT ]
consensusID : consensus_8876#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 747 fasta sequence
[CCGAAACGGGCAGCGCAGAGCACACACCACAGCGCACAGTGAAGTGTGAAGAAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGT--GTGTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCTGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGT--GAGAGTGTGTGCGTCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCA]
[+] EMBL BM656509 [CCGAAACGGGCAGCGCAGAGCACACACCACAGCGCACAGTGAAGTGTGAAGAAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGT GTGTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCTGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGT GAGAGTGTGTGCGTCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTG ]
[+] EMBL BM610037 [ ccgGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGTGAGTGTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCCGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGTGAGAGAGTGTGTGCGCCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGG GCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCCGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCA]
consensusID : consensus_8876#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 700 fasta sequence
[CCGGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAAGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGCTGCACATCGAGAGCAAGTTCTACAAAATGCTTCCAGGGCGCGGTCGGCATCCCGACGATCAAGTGGTGCGGCTCGGAGGGCGACTACAACG]
[+] EMBL BM645588 [CCGGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAAGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGCTGCACATCGAGAGCAAGTTCTACAAAATGCTTCCAGGGCGCGGTCGGCATCCCGACGATCAAGTGGTGCGGCTCGGAGGGC ]
[+] EMBL BX603326 [ GAGGACGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGCTGCACATCGAGAGCAAGTTCTACAAAATGC TCCAGGGCGCGGTCTGCATCCCGACGATCAAGTGGTGCGGCTCGGAGGGCGACTACAACG]
consensusID : consensus_8876#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 682 fasta sequence
[CCGCCCAACACGACGGCAGAAGGCAGGCAGGCAGTCATATCATTGTATTGCACACAACCGAGCGCACACGTTTTCTGTCCCGAGGAACCATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTACCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCA]
[+] EMBL BM580690 [CCGCCCAACACGACGGCAGAAGGCAGGCAGGCAGTCATATCATTGTATTGCACACAACCGAGCGCACACGTTTTCTGTCCCGAGGAACCATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTACCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCA]
consensusID : consensus_8876#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 644 fasta sequence
[GGCCAAGAATCNCGCACGAGGTGCAACAACAGCAGCAGCGTCGGCTACCGCGCTCGTCGGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGGGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTAGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGAATAATATTAACAGTGTTTCTCTAATTTGTATATACTTTCCATTCCCGCGCGCGCGCACACACNCAGNAAGCCCACAACTGTGTCGATAGTTCAAACTCGGACGACACGGCTCTGGCNCAAAGCAACCANNACCAGTAGGGAAATTACAGAACGGTACTAANGCGAAGCAN]
[+] EMBL BX467281 [GGCCAAGAATCNCGCACGAGGTGCAACAACAGCAGCAGCGTCGGCTACCGCGCTCGTCGGCAGCCACGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGCGGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCAGCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCGGGCGGGGCGGGTGGAAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGGCGACCCGAGCGTGGATGCGGCGGTAGTGGCAGCTTCCTTCTCGCGGCACGAAACGCCCGAGCGCCGCTCCTCGATTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGAATAATATTAACAGTGTTTCTCTAATTTGTATATACTTTCCATTCCCGCGCGCGCGCACACACNCAGNAAGCCCACAACTGTGTCGATAGTTCAAACTCGGACGACACGGCTCTGGCNCAAAGCAACCANNACCAGTAGGGAAATTACAGAACGGTACTAANGCGAAGCAN]
consensusID : consensus_8876#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 581 fasta sequence
[CCAGGCAAGAATCGGCACGAGGTATATGCGGGTGACCTTTCTGGCGTGAACCCGTCCAATTTTGTCCGTGAGACAAACGGCAGGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGCAGAAGAGGAAGACTAAATCGTAACAGCCCAGCAAGGAGGACGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGNCTGCACATCGAGAGCAAGTTCTACAAAATGCTCCAGGGCGCGGTCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGGCGGCCAGCCGNCGGGCCACACAGTAA]
[+] EMBL BX469371 [CCAGGCAAGAATCGGCACGAGGTATATGCGGGTGACCTTTCTGGCGTGAACCCGTCCAATTTTGTCCGTGAGACAAACGGCAGGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGCAGAAGAGGAAGACTAAATCGTAACAGCCCAGCAAGGAGGACGAAAAGCACGTGGCCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTCCACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAAGTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAACATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCAGNCTGCACATCGAGAGCAAGTTCTACAAAATGCTCCAGGGCGCGGTCGGCATGGTGATGGGCGGTGGGCCACAAACGCTCGGGCGGCCAGCCGNCGGGCCACACAGTAA]
consensusID : consensus_8876#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 577 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGTGTGTTTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCCGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGTGAGTGTGTGCGCCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACTACGGGGCGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTA]
[+] EMBL BM616519 [CCGCCCACGCGTCCGCCCACGCGTCCGAGCAGTGAAAAAGAAACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGGGAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTAAGGTGTTGTGTGTGTGTGTGTTTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCCTGTTCCTGTTCCGTGCCCCGCACACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAGTGTCTGCGTGTGTGTGTGAGTGTGTGCGCCACAACCGTGTCCCACATGGACTCCGGAGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAGTCAAACGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACGACTACGGGGCGATCGCGAGTGGCAGGTGGAGGCGCGCAGAAAAGGAAGACTA]
consensusID : consensus_8876#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 374 fasta sequence
[GCCCCGAGGTTTCGAGCGCACACGTTTTCTGTCCCGAGGAACATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTGCCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACCGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGC]
[+] EMBL AL694557 [GCCCCGAGGTTTCGAGCGCACACGTTTTCTGTCCCGAGGAACATTTCCCAAGTCGTCTCCTCTGTCGCTTATCTCTGTGTGCCCTTTATTGTTGTGTTGTGCTTCATTGTGCAGTGCTGTGCGTGCCTTCCCGCTGCCTGTGTAGAGCAGGGCCAAAGATGGTGGCGGCGGCCACCCTTGTGTGTCGAAGTCGTAGTCGTTGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGGTGTGGCGTGAACCGTCCATTTTGTCCGTGAGACAAACGGCAGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCGGAGCAGTCAAAAGAGCGGCAACCGACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTGCGC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 CCGCCGGTACGCCTCGATCAACACGCACCTGGGCATCGAGCAGTCGCGCCGGGACGATCT 60
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 CGAGTCGCTCGGGTACGTGCTGATGTACTTCAACCTCGGCACGCTGCCCTGGCAGGGGCT 120
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 GAAGGCGGCCAACAAGCGCCAGAAGTACGAGCGGATCTCGGAGAAGAAGCTGTCCACGCC 180
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 GGTCGAGGAGCTGTGCAACGGGTACCCGCGCGAGTTCAGCCTCTATCTCGCGTACTGCCG 240
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 -----------------------------------------------------CCGAAAC 7
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 CCACATGGACTTCATCCAGCGGCCGGACTACTGCTATCTGCGCAAGCTGTTCCGCACGCT 300
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 GGGCAGCGCAGAGCACACACCACAGCGCACAGTGAAGTGTGAAGAAGCAGTGAAAAAGAA 67
consensus_8876#6 ----------------CCGCCCACGCGTCCGCCCACGCGTCC--GAGCAGTGAAAAAGAA 42
consensus_8876#0 CTTCCACCGGCAGGGCTTCGTGTACGATTACGTGTTCGACTGGAATATGCTCAAGTTCGG 360
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 ACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACA 127
consensus_8876#6 ACACCTCACCCGTGTCGTGCGCGTAGGTCGTGTTTCGTTTCGTAGTTTTTTCCTGAAACA 102
consensus_8876#0 GCGGCCGAACCTGAACGCGTTCACCAGCATGAAGCGTGGCCAGAGCCGGACACCCAGTGC 420
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 --------------------------------------------CCGCCCAACACGACGG 16
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 ATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGG 187
consensus_8876#6 ATCGCTGAATTTTCAAAGGCTTCCTTAGTTTTTTCGTGACCTCGCCGCGCGGACCACGGG 162
consensus_8876#0 CACCCAGAACGAGCAGCAGCAGCAGCAGCAACAGCAGCAGCAGCAGGTGCAACAGCAGCA 480
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 CAGAAGGCAGGCAGGCAGTCATATCATTGTATTGCACACAACCGAGCGCACACGTTTTCT 76
consensus_8876#7 ------------------------------GCCCCGAGGTTTCGAGCGCACACGTTTTCT 30
consensus_8876#2 ------------------------------------------------------------
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 GAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTA-AGGTGTTGTGT 246
consensus_8876#6 GAACGTGCGTCAACCTAGCCAAAGCACAGCGCACCAACCATCTGGGTA-AGGTGTTGTGT 221
consensus_8876#0 GCAGGTGCAGCAGGTGCAGCAGCAGCAGCAACAGAAGCAAATCGCCAACACCACCTCGGT 540
consensus_8876#4 ------------------------------------------------------------
consensus_8876#3 GTCCCGAGGAACCATTTCCCAAGTC---GTCTCCTCTGTCGCTTATCTCTGTGTGCCCTT 133
consensus_8876#7 GTCCCGAGGAAC-ATTTCCCAAGTC---GTCTCCTCTGTCGCTTATCTCTGTGTGCCCTT 86
consensus_8876#2 -----------------------CC---GGCAGTGAAAAAGAAACACCTCACCCGTGTCG 34
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 GTGTGTGTGT--CCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCC 304
consensus_8876#6 GTGTGTGTGTTTCCGTCAGCACTTCCACGTTTTTGTGGCCGTTCTGCTTGGTGCCGTTCC 281
consensus_8876#0 AACGACGCCGTCCAAAGTGGCCGGTGGCGGCGGCGGTGTGGTAGTAGCCGGCGGCGTCAA 600
consensus_8876#4 ------------------------------------------------------GGCCAA 6
consensus_8876#3 TATTGTTGTGTTGTGCTTCATT-GTGCAGTGCTGTGCGTGCCTTCCCGCTACCTGTGTAG 192
consensus_8876#7 TATTGTTGTGTTGTGCTTCATT-GTGCAGTGCTGTGCGTGCCTTCCCGCTGCCTGTGTAG 145
consensus_8876#2 TGCGCGTAGGTCGTGTTTCGTT-TCGTAGTTTTTTCCTGAAACAATCGCTGAATTTTCAA 93
consensus_8876#5 ------------------------------------------------------------
consensus_8876#1 TGTTCCTGTTCTGTGCCCCGCA-CACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAG 363
consensus_8876#6 TGTTCCTGTTCCGTGCCCCGCA-CACACGCGCGCGCGTCTCCCATTCCGCCCCTGCCAAG 340
consensus_8876#0 CAGCGTCA-ACAATGC-CAACAACAGCAGCAGCGTCGG-TACCGCGCTCGTCAGCAGCCA 657
consensus_8876#4 GAATCNCGCACGAGGTGCAACAACAGCAGCAGCGTCGGCTACCGCGCTCGTCGGCAGCCA 66
consensus_8876#3 AGCAGGGCCAAAGATGGTG----GCGGCGGCCACCCTTGTGTGTC-GAAGTCGTAGTCGT 247
consensus_8876#7 AGCAGGGCCAAAGATGGTG----GCGGCGGCCACCCTTGTGTGTC-GAAGTCGTAGTCGT 200
consensus_8876#2 AGGCTTCCTTAGTTTTTTC----GTGACCTCGCCGCGCGGACCAC-GGGGAACGTGCGTC 148
consensus_8876#5 ---------------------------------------------------CCAGGCAAG 9
consensus_8876#1 TGTCTGCGTGTGTGTGTGAGAGTGTGTGCGTCACAACCGTGTCCC-ACA-TGGACTCCGG 421
consensus_8876#6 TGTCTGCGTGTGTGTGTGA--GTGTGTGCGCCACAACCGTGTCCC-ACA-TGGACTCCGG 396
consensus_8876#0 CGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGC 717
consensus_8876#4 CGCGACCTCGGGCGGCGGCGTGGTCGGTGGCAACAGTGCGGCGACAGCGGCGGCCGTAGC 126
consensus_8876#3 TGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGG--TGTG--GCGTGAACC-GTCCA 302
consensus_8876#7 TGCTGGTGACGACAGAGTGTAGTAGGCGGCGCTGTGG--TGTG--GCGTGAACC-GTCCA 255
consensus_8876#2 AACCTA----GCCAAAGCACAGCGCACCA-ACCAT----CTGG--GCGTGAACC-GTCCA 196
consensus_8876#5 AATCGG----CACGAGGTATATGCGGGTG-ACCTT----TCTG--GCGTGAACCCGTCCA 58
consensus_8876#1 AGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAG--TCAAACGCGTGAACC-GTCCA 478
consensus_8876#6 AGTCGGCCAACTCGATGCTACCATCTCGAATCGGTAG--TCAAACGCGTGAACC-GTCCA 453
consensus_8876#0 GGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCA 777
consensus_8876#4 GGCTGCCGCCGCCGCCGACAAGAACAAGGAAATGTCGCCCCAGACGCGCCACCTGCTGCA 186
* * * *** * * * **
consensus_8876#3 -TTTTGTCCGTGAGACAAACGGCAGGG-CAGCAGCAGCAGCAG---GATCATCCGCTCCG 357
consensus_8876#7 -TTTTGTCCGTGAGACAAACGGCAGGG-CAGCAGCAGCAGCAGCAGGATCATCCGCTCCG 313
consensus_8876#2 -TTTTGTCCGTGAGACAAACGGCAGGG----CAGCAGCAGCAGCAGGATCATCCGCTCCG 251
consensus_8876#5 ATTTTGTCCGTGAGACAAACGGCAGGGGCAGCAGCAGCAGCAGCAGGATCATCCGCTCCG 118
consensus_8876#1 -TTTTGTCCGTGAGACAAACGGCAGGG----CAGCAGCAGCAGCAGGATCATCCGCTCCG 533
consensus_8876#6 -TTTTGTCCGTGAGACAAACGGCAGGG----CAGCAGCAG------GATCATCCGCTCCG 502
consensus_8876#0 GCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCG------GGCGGTGCGGGTGG 831
consensus_8876#4 GCATTTCATACGGACGGAGCTACAGAAGGGCCAGCCGCCG------GGCGGGGCGGGTGG 240
** * * * *** **** ** * * ** *
consensus_8876#3 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCG 414
consensus_8876#7 GAGCAGTCAAAAG-AGCGGCAACC-GACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTG 371
consensus_8876#2 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCG 308
consensus_8876#5 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGCGATCGCGAGTGGCAGGTGGAGGTG 175
consensus_8876#1 GAGCAGTCAAAAG-AGCGGCAAC--GACGACGGGGTGATCGCGAGTGGCAGGTGGAGGCG 590
consensus_8876#6 GAGCAGTCAAAAG-AGCGGCAAC--GACTACGGGGCGATCGCGAGTGGCAGGTGGAGGCG 559
consensus_8876#0 AAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGCGGACCACAAACGCT 891
consensus_8876#4 AAGCGTGCAGCAGCAGCAGCAACCGGGCGGCATGGTGATGGGCGGTGGGCCACAAACGCT 300
*** ** ** *** ***** * * * ** *** * * ** * *
consensus_8876#3 CG-CAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGG 473
consensus_8876#7 CG-C-------------------------------------------------------- 374
consensus_8876#2 CG-CAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGG 367
consensus_8876#5 CG-CAGAAGAGGAAGACTAAATCGTAACAGCC--CAGCAAGGAGGACGAAAAGCACGTGG 232
consensus_8876#1 CG-CAGAAAAGGAAGACTAAATCGTAACAACCCCCAGCAAAGAGGGCGAAAAGCACGTGG 649
consensus_8876#6 CG-CAGAAAAGGAAGACTA----------------------------------------- 577
consensus_8876#0 CGGCGGCCAGCCGTCGGCGCACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGG 951
consensus_8876#4 CGGCGGCCAGCCGTCGGCACACAGTAACAACATCAACAACAACAGTGGCGTCGGGGGCGG 360
** *
consensus_8876#3 CCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTC 533
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 CCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTC 427
consensus_8876#5 CCGCGTGAACTAAAGCTTGGCTAAAGCACTCACACACATCCCGCTAACACCAGAGTCGTC 292
consensus_8876#1 CCGCGTGAACTAAAGCTTGGCTAAAGCACACACACACATCCCGCTAGCACAAGAGTCGTC 709
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 CGACCCGAGCGTGGATGCGGCGGTGGTGGCAGCTTCCTTCTCGC-GGCACGAAACGC-CC 1009
consensus_8876#4 CGACCCGAGCGTGGATGCGGCGGTAGTGGCAGCTTCCTTCTCGC-GGCACGAAACGC-CC 418
consensus_8876#3 CACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAA 593
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 CACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAA 487
consensus_8876#5 CACTGACGCCACTGCAACCACACAGACACCACCAGTCATGGAGCTGCGCGTTGGCAACAA 352
consensus_8876#1 CACTGACGCCACTGCAACCACACAGACACCACCAGTCA---------------------- 747
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 GAGCGCCGCTCCTCGATTTCGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGA--- 1066
consensus_8876#4 GAGCGCCGCTCCTCGATT-CGTCTGCGCGGGCAAAATCTGGACGCACGGAATGCGGAATA 477
consensus_8876#3 GTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAA 653
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 GTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAA 547
consensus_8876#5 GTACCGGCTCGGGCGGAAGATCGGTTCCGGCTCGTTCGGGGACATCTATCTCGGCACGAA 412
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 ------------------------------------------------------------
consensus_8876#4 ATATTAACAGTGTTTCTCTAATTTGTATATACTTTCCATTCCCGCGCGCGCGCACACACN 537
consensus_8876#3 CATCTCCACCGGCGAGGAGGTCGCGATCA------------------------------- 682
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 CATCTCCACCGGCGAGGAAGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCA 607
consensus_8876#5 CATCTCCACCGGCGAGGAGGTCGCGATCAAGCTCGAATGCATCAAGACAAAGCACCCGCA 472
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 ------------------------------------------------------------
consensus_8876#4 CAGNAAGCCCACAACTGTGTCGATAGTTCAAACTCGGACGACACGGCTCTGGCNCAAAGC 597
consensus_8876#3 ------------------------------------------------------------
consensus_8876#7 ------------------------------------------------------------
consensus_8876#2 GC-TGCACATCGAGAGCAAGTTCTACAAAATGCTTCCAGGGCGCGGTCGGCATCCCGACG 666
consensus_8876#5 GNCTGCACATCGAGAGCAAGTTCTACAAAATGCT-CCAGGGCGCGGTCGGCATGGTGATG 531
consensus_8876#1 ------------------------------------------------------------
consensus_8876#6 ------------------------------------------------------------
consensus_8876#0 ------------------------------------------------------------
consensus_8876#4 AACCANNACCAGTAGGGAAATTACAGAACGGTACTAANGCGAAGCAN------------- 644
consensus_8876#3 --------------------------------------------------
consensus_8876#7 --------------------------------------------------
consensus_8876#2 ATCAAGTGGT-GCGGCTCGGAGGGCGACTA--CAACG------------- 700
consensus_8876#5 GGCGGTGGGCCACAAACGCTCGGGCGGCCAGCCGNCGGGCCACACAGTAA 581
consensus_8876#1 --------------------------------------------------
consensus_8876#6 --------------------------------------------------
consensus_8876#0 --------------------------------------------------
consensus_8876#4 --------------------------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||