cluster # 8888

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Anopheles gambiae
cluster # 8888 cluster # 8888 Sequences # 12 consensus # 5

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8888#0 length = 1301 sequences # 6
consensus_8888#1 length = 896 sequences # 1

consensus_8888#2 length = 685 sequences # 2
consensus_8888#3 length = 475 sequences # 2
consensus_8888#4 length = 358 sequences # 1

consensusID : consensus_8888#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1301
fasta sequence

                              [CCGCGAGTGCGTTCACTTCGGCACCGACCTGTCGGAGAGCCAGCGGGAGGACCATCCGGACGGGCCGACGCTGCAGTCGATGCCGTCGGAGCAGATCCGCTCGCAGCTGGTCAATATGTCGGTGGTGCTGCACCGCGCCATCGCCACGATCAACCCGAACCGCAAGAAGGCGGAGCGGGAGCGGCTGCGCGCCCAGATGGTGCACCAGTACGAGGAGAACGCGGACAAGGAGCACCAGCGTATACTGCAGCGCCAGAAGAAGATCGAGGACCGCAAGGAGTACATCGAGCGCATGAACCAGGAGCGCGAGGAGGAGGAGCTGCGCCTGCAGGAGGAGCAGGTGCGCATGCAGAAGCTGGCCGAACAGCGCCGCCTCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACGAGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGAGATCCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGAGAAGCAGGAAGCGGCCCGCATCGAGGCGGCCA-TCG-CCGAGCGCAAGAACGC--GGAAGCGTGCCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGG-AGGAGGAGCGTAAGCGCCGGCTGGCCGACCGAGTCGTCAAGCGCCGCGAGGAGCGCCGCATGAAGTGGCTGAAGGAAAAGGAGGAGGAGCGCCGTCGCATCGAAGAGGAGCTGCGCAAGCAGAAGGAAGAGGCGGACCGCATCCAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATACAGGACGAGAAGAACCGTCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAGCGCCGAAGAAGGGAAGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGCCCTGCAGCGGGACCGGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCACCCGCCAATCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTT]

[+] EMBL BM578798             [CCGCGAGTGCGTTCACTTCGGCACCGACCTGTCGGAGAGCCAGCGGGAGGACCATCCGGACGGGCCGACGCTGCAGTCGATGCCGTCGGAGCAGATCCGCTCGCAGCTGGTCAATATGTCGGTGGTGCTGCACCGCGCCATCGCCACGATCAACCCGAACCGCAAGAAGGCGGAGCGGGAGCGGCTGCGCGCCCAGATGGTGCACCAGTACGAGGAGAACGCGGACAAGGAGCACCAGCGTATACTGCAGCGCCAGAAGAAGATCGAGGACCGCAAGGAGTACATCGAGCGCATGAACCAGGAGCGCGAGGAGGAGGAGCTGCGCCTGCAGGAGGAGCAGGTGCGCATGCAGAAGCTGGCCGAACAGCGCCGCCTCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACGAGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM588797             [                                                                                                                                                                                                                                                                  ccgGATCGAGGACCGCAAGGAGTACATCGAGCGCATGAACCAGGAGCGCGAGGAGGAGGAGCTGCGCCTGCAGGAGGAGCAGGTGCGCATGCAGAAGCTGGCCGAACAGCGCCGCCTCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACGAGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGAGATCCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGAGAAGCAGGAAGCGGCCCGCATCGAGGCGGCCA TCG CCGAGCGCAAGAACGC  GGAAGCGTGCCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGGAAGCAGGAGCGTAAGCGCCGGCTGGCCGACCG                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM597753             [                                                                                                                                                                                                                                                                                                                                                                           ccgGCGCCGTCTCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACGAGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGAGATCCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGAGAAGCAGGAAGCGGCCCGCATCGAGGCGGCCA TCG CCGAGCGCAAGAACGC  GGAAGCGTGCCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGG AGGAGGAGCGTAAGCGCCGGCTGGCCGACCGAGTCGTCAAGCGCCGCGAGGAGCGCCGCATGAAGTGGCTGAAGGAAAAGGAGGAGGAGCGCCGTCGCATC                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM590007             [                                                                                                                                                                                                                                                                                                                                                                                    CCGCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACGAGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGAGATCCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGAGAAGCAGGAAGCGGCCCGCATCGAGGCGGCCA TCG CCGAGCGCAAGAACGC  GGAAGCGTGCCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGG AGGAGGAGCGTAAGCGCCGGCTGGCCGACCGCGTCGTCAAGCGCCGCGAGGA                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM653712             [                                                                                                                                                                                                                                                                                                                                                                                                            ccgGCGCAAGCGGCATGAGAACGAGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGAGATCCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGAGAAGCAGGAAGCGGCCCGCATCGAGGCGGCCA TCG CCGAGCGCAAGAACGC  GGAAGCGTGCCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGG AGGAGGAGCGTAAGCGCCGGCTGGCCGACCGAGTCGTCAAGCGCCGCGAGGAGCGCCGCATGAAGTGGCTGAAGGAAAAGGAGGAGGAGCGCCGTCGCATCGAAGAGGAGCTGCGCAAGCAGAAGGAAGAGGCGGACCGCATCCAGCGCGAGCGGCGTGCCGAGGAGCGGCG                                                                                                                                                                                                                                               ]
[+] EMBL BM605065             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cCGCCCACGCGTCCGGGCG ATGGCCGCCTCGATGCGGGCCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGG AGGAGGAGCGTAAGCGCCGGCTGGCCGACCGAGTCGTCAAGCGCCGCGAGGAGCGCCGCATGAAGTGGCTGAAGGAAAAGGAGGAGGAGCGCCGTCGCATCGAAGAGGAGCTGCGCAAGCAGAAGGAAGAGGCGGACCGCATCGAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATACAGGACGAGAAGAACCGTCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAGCGCCGAAGAAGGGAAGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGCCCTGCAGCGGGACCGGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCACCCGCCAATCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTT]




>consensus_8888#0
CCGCGAGTGCGTTCACTTCGGCACCGACCTGTCGGAGAGCCAGCGGGAGGACCATCCGGA
CGGGCCGACGCTGCAGTCGATGCCGTCGGAGCAGATCCGCTCGCAGCTGGTCAATATGTC
GGTGGTGCTGCACCGCGCCATCGCCACGATCAACCCGAACCGCAAGAAGGCGGAGCGGGA
GCGGCTGCGCGCCCAGATGGTGCACCAGTACGAGGAGAACGCGGACAAGGAGCACCAGCG
TATACTGCAGCGCCAGAAGAAGATCGAGGACCGCAAGGAGTACATCGAGCGCATGAACCA
GGAGCGCGAGGAGGAGGAGCTGCGCCTGCAGGAGGAGCAGGTGCGCATGCAGAAGCTGGC
CGAACAGCGCCGCCTCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACGA
GCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAAGATCGAGCAGATCAAGCAGACGGC
CACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACGGA
GGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAACAA
CCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGAGAT
CCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGAGAA
GCAGGAAGCGGCCCGCATCGAGGCGGCCATCGCCGAGCGCAAGAACGCGGAAGCGTGCCA
GGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGCAGCAGCTGAAGAACGA
GCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGGAGGAGGAGCG
TAAGCGCCGGCTGGCCGACCGAGTCGTCAAGCGCCGCGAGGAGCGCCGCATGAAGTGGCT
GAAGGAAAAGGAGGAGGAGCGCCGTCGCATCGAAGAGGAGCTGCGCAAGCAGAAGGAAGA
GGCGGACCGCATCCAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATACAGGACGAGAAGAA
CCGTCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAGCGCCGAAGAAGGGA
AGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGCCCTGCAGCGGGACC
GGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCACCCGCCAA
TCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTT

consensusID : consensus_8888#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 896
fasta sequence

                              [CAGAATTCCCGAGGTTAGTCAGGTGATGCACAGCCGGAACTGGTACTCCCNGGNGAGATGACCTGTCCGGGTGGCTGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGATGATCGCCGTGTGCTGATGACCGTGGTCCACGTGGTGGTGGCTGAGCTGGGGCAATACGTGGCTGTCGCGGACCTGGCCTGACAATGNCGACCGATAAACCGTACTAGGGGGACCTGAGGGGACGAAAANGACTGGCAAGGATACCCTGGGCGGCAACACTCGGCCAGGATGCAGGANCCCAAAGCANGAACAGAGGATCTGACACCCAGGACGCGNACAGGCCACGTACCTTGCTCAGGCAACCACACTGTATCCCACGCCCGCAAGCACAAACAGGCCCCAGAGCACCCCACGAATTCGAAGNGCACAACGGATTGTGGNACGANGACTTGTTAGAAAAGCCAACCNCGGACTTAAGCAGTAGTTACAGTTGCCGGTAGCTTAANAGCGCCGACGCCCTAATNGCGCNTANTTGCCTAGTTATACNGTAGAAACTGGATTCACATTACAAACAAATTTTAACANACGACCCACGAAACTGCGTTATANCCACNTAATATGCNACAAGAAACAAAACCATCCANACAAACCCAAACGCTCACTTGNATCGNGACAACAACCCCCACCATTTAAACTTNTCCCCTTTGGCATATCTNCCTTACTNATCATCCACTTTATATCNCATANAAACTACCACTTAAAAAAATACACCCAACTCTTCTCTAACNCGGTCCACACACNTCATCGNCCACCCGNACAACCAATTAAATCTTAAATTTACAAAGNTTAACTTCCAGTTAAACNTAATAAACCACTTNATC]

[+] EMBL AL695584             [CAGAATTCCCGAGGTTAGTCAGGTGATGCACAGCCGGAACTGGTACTCCCNGGNGAGATGACCTGTCCGGGTGGCTGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGATGATCGCCGTGTGCTGATGACCGTGGTCCACGTGGTGGTGGCTGAGCTGGGGCAATACGTGGCTGTCGCGGACCTGGCCTGACAATGNCGACCGATAAACCGTACTAGGGGGACCTGAGGGGACGAAAANGACTGGCAAGGATACCCTGGGCGGCAACACTCGGCCAGGATGCAGGANCCCAAAGCANGAACAGAGGATCTGACACCCAGGACGCGNACAGGCCACGTACCTTGCTCAGGCAACCACACTGTATCCCACGCCCGCAAGCACAAACAGGCCCCAGAGCACCCCACGAATTCGAAGNGCACAACGGATTGTGGNACGANGACTTGTTAGAAAAGCCAACCNCGGACTTAAGCAGTAGTTACAGTTGCCGGTAGCTTAANAGCGCCGACGCCCTAATNGCGCNTANTTGCCTAGTTATACNGTAGAAACTGGATTCACATTACAAACAAATTTTAACANACGACCCACGAAACTGCGTTATANCCACNTAATATGCNACAAGAAACAAAACCATCCANACAAACCCAAACGCTCACTTGNATCGNGACAACAACCCCCACCATTTAAACTTNTCCCCTTTGGCATATCTNCCTTACTNATCATCCACTTTATATCNCATANAAACTACCACTTAAAAAAATACACCCAACTCTTCTCTAACNCGGTCCACACACNTCATCGNCCACCCGNACAACCAATTAAATCTTAAATTTACAAAGNTTAACTTCCAGTTAAACNTAATAAACCACTTNATC]




>consensus_8888#1
CAGAATTCCCGAGGTTAGTCAGGTGATGCACAGCCGGAACTGGTACTCCCNGGNGAGATG
ACCTGTCCGGGTGGCTGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGT
GATGATCGCCGTGATGATCGCCGTGTGCTGATGACCGTGGTCCACGTGGTGGTGGCTGAG
CTGGGGCAATACGTGGCTGTCGCGGACCTGGCCTGACAATGNCGACCGATAAACCGTACT
AGGGGGACCTGAGGGGACGAAAANGACTGGCAAGGATACCCTGGGCGGCAACACTCGGCC
AGGATGCAGGANCCCAAAGCANGAACAGAGGATCTGACACCCAGGACGCGNACAGGCCAC
GTACCTTGCTCAGGCAACCACACTGTATCCCACGCCCGCAAGCACAAACAGGCCCCAGAG
CACCCCACGAATTCGAAGNGCACAACGGATTGTGGNACGANGACTTGTTAGAAAAGCCAA
CCNCGGACTTAAGCAGTAGTTACAGTTGCCGGTAGCTTAANAGCGCCGACGCCCTAATNG
CGCNTANTTGCCTAGTTATACNGTAGAAACTGGATTCACATTACAAACAAATTTTAACAN
ACGACCCACGAAACTGCGTTATANCCACNTAATATGCNACAAGAAACAAAACCATCCANA
CAAACCCAAACGCTCACTTGNATCGNGACAACAACCCCCACCATTTAAACTTNTCCCCTT
TGGCATATCTNCCTTACTNATCATCCACTTTATATCNCATANAAACTACCACTTAAAAAA
ATACACCCAACTCTTCTCTAACNCGGTCCACACACNTCATCGNCCACCCGNACAACCAAT
TAAATCTTAAATTTACAAAGNTTAACTTCCAGTTAAACNTAATAAACCACTTNATC

consensusID : consensus_8888#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 685
fasta sequence

                              [CCGCCCACGCGTCCGGCGGACCGCATCGAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATACAGGACGAGAAGAACCGCCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAGCGCCGAAGAAGGGAAGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGCCCTGCAGCGGGACCGGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCTCCCGCCAATCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTTCGGGCCGGTACGGGCCAGGACCGCGCGAACGGGGCGGAGAAACTGGCCCGAAAGATAAGTGGCGCACCGGGCCGGAAGATCACGAGAAGGATGGTGGTGGTGCTGGTGGTATGCGTCGCGGTGGAGATATGCGCCGTGGTCAGGACGATCGTGGACCGATTCGCCGTGGTGGTGGCGAAAAGCGCGGTGAGCGCGAGGATCGTGGTCCGATCCGCCCGTGGTGGTGGTCCAGGTGATGCACCAGCCGGAACTGGCACTCCCCGGCGAGATGACCGTCCGGGTGGCGGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCG]

[+] EMBL BM644635             [CCGCCCACGCGTCCGGCGGACCGCATCGAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATACAGGACGAGAAGAACCGCCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAGCGCCGAAGAAGGGAAGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGCCCTGCAGCGGGACCGGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCTCCCGCCAATCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTTCGGGCCGGTACGGGCCAGGACCGCGCGAACGGGGCGGAGAAACTGGCCCGAAAGATAAGTGGCGCACCGGGCCGGAAGATCACGAGAAGGATGGTGGTGGTGCTGGTGGTATGCGTCGCGGTGGAGATATGCGCCGTGGTCAGGACGATCGTGGACCGATTCGCCGTGGTGGTGGCGAAAAGCGCGGTGAGCGCGAGGATCGTGGTCCGATCCGCCCGTGGTGGTGGTCCAGGTGATGCACCA                                                                                                                                                   ]
[+] EMBL BM637520             [                                                                                                                                                                                                                                                                                                        ccGCCGGTACGGACCGGGACCTCGCGAACGGGGCGGAGAAACTGGCCCGAAAGATAAGTGGCGCACCGGGCCGGAAGATCACGAGAGGGATGGTGGTGGTGCTGGTGGTATGCGTCGCGGTGGCGATATGCGCCGTGGTCAGGACGATCGTGGACCGATTCGTCGTGGTGGTGGCGAAGAGCGTGGTGAGCGCGAGGATCGTGGTCCGATTCG CCGTGGTGGTGGTCCAGGTGATGCACCAGCCGGAACTGGCACTCCCCGGCGAGATGACCGTCCGGGTGGCGGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCG]




>consensus_8888#2
CCGCCCACGCGTCCGGCGGACCGCATCGAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATA
CAGGACGAGAAGAACCGCCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAG
CGCCGAAGAAGGGAAGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGC
CCTGCAGCGGGACCGGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCC
GCAGCTCCCGCCAATCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTTCGGGC
CGGTACGGGCCAGGACCGCGCGAACGGGGCGGAGAAACTGGCCCGAAAGATAAGTGGCGC
ACCGGGCCGGAAGATCACGAGAAGGATGGTGGTGGTGCTGGTGGTATGCGTCGCGGTGGA
GATATGCGCCGTGGTCAGGACGATCGTGGACCGATTCGCCGTGGTGGTGGCGAAAAGCGC
GGTGAGCGCGAGGATCGTGGTCCGATCCGCCCGTGGTGGTGGTCCAGGTGATGCACCAGC
CGGAACTGGCACTCCCCGGCGAGATGACCGTCCGGGTGGCGGGTTCAACCGCGATCGCCG
TGACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACGTGGTGGTGGCGAGCG
GGGCAATACGTGGCGTCGCGGACCG

consensusID : consensus_8888#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 475
fasta sequence

                              [TTCCCCGGGTTTTTTCANCCGGAACTGCCTCCCGTTAGATAACTGTCCGGNTGGCGGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCGG-CGACAATGCCGACGATAACCGTCGGGGACCGAGGGACGAAGGACGGCAGGATACCTGGCGCAACACCCGGCAGGATGCGGCACCCAAGCAGAAATNNGATCGACCCCAGCGCGAAGCACGTCCTGCTCAGGAAAATGTTCCCCCCCGCAGCAACGCCGGCCCAGATGAGGAAGGATGGACGGATGTGAAGCACCGCTAGAGTGTAGTGCGTGTGAGCGCGCGCTTGCTTGCGTTCGTGACGTCTAGTTAAGCGAGTAACTTTAAAACACAACAGTGGAACCATATTCTGTTCTTTCTTTTTTCTAACCATTACG]

[+] EMBL AL694243             [TTCCCCGGGTTTTTTCANCCGGAACTGCCTCCCGTTAGATAACTGTCCGGNTGGCGGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCGG CGACAATGCCGACGATAACCGTCGGGGACCGAGGGACGAAGGACGGCAGGATACCTGGCGCAACACCCGGCAGGATGCGGCACCCAAGCAGAAATNNGATCGACCCCAGCGCGAAGCACGTCCTGCTCAGGAAAATGTTCCCCCCCGCAGCAACGCCGGCCCAGATGAGGAAGGATGGACGGATGTGAAGCACCGCTAGAGTGTAGTGCGTGTGAGCGCGCGCTTGCTTGCGTTCGTGACGTCTAGTTAAGCGAGTAACTTTAAAACACAACAGTGGAACCATATTCTGTTCTTTCTTTTTTCTAACCATTACG]
[+] EMBL BX609852             [                                                                                        GATGATCGCCGTGGCGATGACCGTGGACCATGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCGGCCGACAATGCCGACGATAACCGTCGGGGACCGAGGGACGAAGGACGGCAGGATACCTGGCGCAACACCCGGCAGGATGCGGCACCCAAGCAGAAAGAGGATCGACCCCAGCGCGAAGCACGTCCTGCTCAGGAAAATGTTCCCCCCCGCAGCAACGCCGGCCCAGATGAGGAAGGATGGACGGATGTGAAGCACCGCTAGAGTGTAGTGCGTGTGAGCGCGCGCTTGCTTGCGTTCGTGACGTCTAGTTAAGCGAGTAACTTTAAAACACAACAGTGGAACCATATTCTGTTCTTTCTTTTTTCTAACCAT    ]




>consensus_8888#3
TTCCCCGGGTTTTTTCANCCGGAACTGCCTCCCGTTAGATAACTGTCCGGNTGGCGGGTT
CAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACG
TGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCGGCGACAATGCCGACGATAAC
CGTCGGGGACCGAGGGACGAAGGACGGCAGGATACCTGGCGCAACACCCGGCAGGATGCG
GCACCCAAGCAGAAATNNGATCGACCCCAGCGCGAAGCACGTCCTGCTCAGGAAAATGTT
CCCCCCCGCAGCAACGCCGGCCCAGATGAGGAAGGATGGACGGATGTGAAGCACCGCTAG
AGTGTAGTGCGTGTGAGCGCGCGCTTGCTTGCGTTCGTGACGTCTAGTTAAGCGAGTAAC
TTTAAAACACAACAGTGGAACCATATTCTGTTCTTTCTTTTTTCTAACCATTACG

consensusID : consensus_8888#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 358
fasta sequence

                              [CGTGGTGGTGGCGAAGAGCGTGGTGAGCGCGAGGATCGTGGTCCGATTCGCCGTGGTGGTGGTCCAGGTGATGCACCAGCCGGAACTGGCACTCCCCGGCGAGATGACCGTCCGGGTGGCTGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGATGATCGCCGTGGCGATGACCGTGGTCCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCGGCCGACAATGCCGACGATAACCGTCGGGGACCGAGGGACGAAGGACGGCAGGATACCTGGCGCAACACTCGGCAGGATGCGGCACCCAAGCAGAAAGAGGATCGACCCC]

[+] EMBL BX617341             [CGTGGTGGTGGCGAAGAGCGTGGTGAGCGCGAGGATCGTGGTCCGATTCGCCGTGGTGGTGGTCCAGGTGATGCACCAGCCGGAACTGGCACTCCCCGGCGAGATGACCGTCCGGGTGGCTGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGATGATCGCCGTGGCGATGACCGTGGTCCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGTCGCGGACCGGCCGACAATGCCGACGATAACCGTCGGGGACCGAGGGACGAAGGACGGCAGGATACCTGGCGCAACACTCGGCAGGATGCGGCACCCAAGCAGAAAGAGGATCGACCCC]




>consensus_8888#4
CGTGGTGGTGGCGAAGAGCGTGGTGAGCGCGAGGATCGTGGTCCGATTCGCCGTGGTGGT
GGTCCAGGTGATGCACCAGCCGGAACTGGCACTCCCCGGCGAGATGACCGTCCGGGTGGC
TGGTTCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGAT
GATCGCCGTGGCGATGACCGTGGTCCACGTGGTGGTGGCGAGCGGGGCAATACGTGGCGT
CGCGGACCGGCCGACAATGCCGACGATAACCGTCGGGGACCGAGGGACGAAGGACGGCAG
GATACCTGGCGCAACACTCGGCAGGATGCGGCACCCAAGCAGAAAGAGGATCGACCCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8888#1      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      CCGCGAGTGCGTTCACTTCGGCACCGACCTGTCGGAGAGCCAGCGGGAGGACCATCCGGA 60
                                                                                  

consensus_8888#1      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      CGGGCCGACGCTGCAGTCGATGCCGTCGGAGCAGATCCGCTCGCAGCTGGTCAATATGTC 120
                                                                                  

consensus_8888#1      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      GGTGGTGCTGCACCGCGCCATCGCCACGATCAACCCGAACCGCAAGAAGGCGGAGCGGGA 180
                                                                                  

consensus_8888#1      ------------------------------------------------------------
consensus_8888#4      ------------------------------------------------------CGTGGT 6
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      GCGGCTGCGCGCCCAGATGGTGCACCAGTACGAGGAGAACGCGGACAAGGAGCACCAGCG 240
                                                                                  

consensus_8888#1      ------------------------------------CAGAATTCCCGAGGT--TAGTC-A 21
consensus_8888#4      GGTGGCGAAGAGCGTGGTGAGCGCGAGGATCGTGGTCCGATTCGCCGTGGTGGTGGTCCA 66
consensus_8888#3      -------------------------------------------------------TTCCC 5
consensus_8888#2      -----------------------------------------------------CCGCCCA 7
consensus_8888#0      TATACTGCAGCGCCAGAAGAAGATCGAGGACCGCAAGGAGTACATCGAGCGCATGAACCA 300
                                                                               *  

consensus_8888#1      GGTGATGCAC-AGCCGGAACTGGTACTCCCNGGNGAGATGACCTGTCCG-GGTGGCTGGT 79
consensus_8888#4      GGTGATGCACCAGCCGGAACTGGCACTCCCCGGCGAGATGACC-GTCCG-GGTGGCTGGT 124
consensus_8888#3      CGGGTTTTTTCANCCGGAACTG----CCTCCCGTTAGATAACT-GTCCG-GNTGGCGGGT 59
consensus_8888#2      CGCGTCCGGCGGACCGCATCGAGCG-CGAGCGGCGTGCCGAGG-AGCGG-CGCATACAGG 64
consensus_8888#0      GGAGCGCGAGGAGGAGGAGCTGCGCCTGCAGGAGGAGCAGGTGCGCATGCAGAAGCTGGC 360
                       * *           * * *                *           *         * 

consensus_8888#1      TCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGATGATC 139
consensus_8888#4      TCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGATGATCGCCGTGATGATC 184
consensus_8888#3      TCAACCGCGATCGCCGTGACGACCGTCGTGATGATCGCCGTGG----------------- 102
consensus_8888#2      ACGAGAAGAACCGCCA-GCTGGCGGAGAAGCAGCTCGCCATTG----------------- 106
consensus_8888#0      CGAACAGCG-CCGCCTCGAGGCGGAGAACGAGGAGCGGGAGCGCAAGCGGCATGAGAACG 419
                         *       ****  *  *        *  *  **                       

consensus_8888#1      GCCGTGTGCTGATGACCGTGGTCCACGTGGTGGTGGCTGAGCTGGGGCAATACGT-GGCT 198
consensus_8888#4      GCCGTGG--CGATGACCGTGGTCCACGTGGTGGTGGC-GAGC-GGGGCAATACGT-GGC- 238
consensus_8888#3      ---------CGATGACCGTGGACCACGTGGTGGTGGC-GAGC-GGGGCAATACGT-GGC- 149
consensus_8888#2      ---------CGGAGGAGGTGGAGCGCCGAAGAAGGGAAGAGCTGGAGCAG---AT-GAAG 153
consensus_8888#0      AGCTGCAGATGATGAAGGAGCGCAACATGAAGGAGAA-GATCGAGCAGATCAAGCAGACG 478
                                *  *   * *     *        *   ** *  *   *       *   

consensus_8888#1      GTCGCGGACCTGG----CCTGACAATGNCGACCGATAAA-----CCGTACTAGGGGGACC 249
consensus_8888#4      GTCGCGGACCGG------CCGACAATGCCGAC-GATAA------CCGTC----GGGGACC 281
consensus_8888#3      GTCGCGGACCGG-------CGACAATGCCGAC-GATAA------CCGTC----GGGGACC 191
consensus_8888#2      GAAGCGGACGGGC----GCCGTGAGCGCCGCCCTGCAG------CGGGACCGGCCGAACC 203
consensus_8888#0      GCCACGGGCCAGAAGCTGCTGAAGAAGCTGGACGAGGAAGAGATCCGCAAGCTGAACACG 538
                      *   *** *  *        *     *  *              * *          ** 

consensus_8888#1      TGAGGGGACGAAAANGACTGGCAA-GGATACCCTGGGCGGCAACACTCGGCCAGGATGCA 308
consensus_8888#4      --GAGGGACGAAGGA---CGGCA--GGATACCT--GGCG-CAACACTCGGC-AGGATGCG 330
consensus_8888#3      --GAGGGACGAAGGA---CGGCA--GGATACCT--GGCG-CAACACCCGGC-AGGATGCG 240
consensus_8888#2      --GAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCTCCCGCCAATCCTGCC 261
consensus_8888#0      -GAGGAGATAGCGGCGCGCGAGGCGGAGGAGCGGCTGAAGGAGCGCAAGGCGCACGAGAA 597
                                         *         * *    *    * * *  * *      *  

consensus_8888#1      GGANCCCA--AAGCANGAACAGAGGATCTGACAC--CCAGGACGCGNACAGGCCACG--- 361
consensus_8888#4      GCACCC----AAGCAGAAA--GAGGATC-GACCC--C----------------------- 358
consensus_8888#3      GCACCC----AAGCAGAAA--TNNGATC-GACCC--C---AGCGCGAA------GCA--- 279
consensus_8888#2      GCCGAC----GAGCCGAAGAAGAACGTCTGGCAGGGTTCGGGCCGGTACGGGCCAGGAC- 316
consensus_8888#0      CAACCTGAAGACGCAGGAGAAGAAGATCGACTACTTCGAGCGGGCCAAGCGGCTGGAGGA 657
                                  **   *        **                                

consensus_8888#1      TACCTTGCTCAGGCAACCACACTGTATCCCACGCCCGC--AAGCACAAACAGGCCCCAGA 419
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      CGTCCTGCTCAGGAAAATGTTCCCCCCCGCAGCAACGC--CGGCCCAGATGAG-----GA 332
consensus_8888#2      CGCGCGAACGGGGCGGAGAAACTGGCCCGAAAGATAAG--TGGCGCACCGGGCCGGAAGA 374
consensus_8888#0      GATCCCGCTGATCGAGAAGTACCTGCAGGACCGGTCGGTGCAGGACAAGGAGTTCTGGGA 717
                                                                                  

consensus_8888#1      GCACCCCA--------CGAATT-CGAAGNGCACAACGGATTGTG-GNACGANGACTTGTT 469
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      AGGATGGA--------CGGATG-TGAAGCAC-CGCTAGAGTGTA-GTGCGTG----TGAG 377
consensus_8888#2      TCACGAGA--------AGGATGGTGGTGGTGCTGGTGGTATGCG-TCGCGGTGGA-GATA 424
consensus_8888#0      GAAGCAGGAAGCGGCCCGCATCGAGGCGGCCATCGCCGAGCGCAAGAACGCGGAAGCGTG 777
                                                                                  

consensus_8888#1      AGAAAAGCCAACCNCGGACTTAAGCAGTAGTTACAGTTGCCGGTAGCTTAANAGCGCCGA 529
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      CGCGCGCTTGCTTGCGTTCGTGACGTCTAGTTAA----GCGAGTAACTTTAAAACAC-AA 432
consensus_8888#2      TGCGCCGTGGTCAGGACGATCGTGGACCGATTCGCCGTGGTGGTGGCG-AAAAGCGCGGT 483
consensus_8888#0      CCAGGAGCGGCTGAAGCGCATGCTGCCCGACCGGGACGTCTACTGGC--AGCAGC-TGAA 834
                                                                                  

consensus_8888#1      CGCCCTAATNG-CGCNTANTTGCCTAGTTATACNGTAGAAACTGGATTCACATTACAAAC 588
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      CAGTGGAACCA-TATTCTGTTCTTTCTTTTTTCTAACCATTACG---------------- 475
consensus_8888#2      GAGCGCGAGGATCGTGGTCCGATCCGCCCGTGGTGGTGGTCCAGGTGATGCACCAGCCGG 543
consensus_8888#0      GAACGAGCGCGGCAACCAGTTCGCCGAGAAGCTGAAGCAGTTCAACCAGGCGCTGGAGGA 894
                                                                                  

consensus_8888#1      AAATTTTAACANACGACCCACGAAACT-GCGTTATANCCACNTAATATGCNACAAGAAAC 647
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      AACTGGCACTCCCCGGCGAGATGACCG-TCCGGGTGGCGGGTTCAACCGCGATCGCCGTG 602
consensus_8888#0      GGAGCGTAAGCGCCGGCTGGCCGACCGAGTCGTCAAGCGCCGCGAGGAGCGCCGCATGAA 954
                                                                                  

consensus_8888#1      AAAACCATCCANACAA--ACCCAAACGCTCACTTGNATCGNGACAACAACCCCCACCATT 705
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ACGACCGTCGTGATGATCGCCGTGGCGATGACCGTGGACCACGTGGTGGTGGCGAGCGGG 662
consensus_8888#0      GTGGCTGAAGGAAAAGGAGGAGGAGCGCCGTCGCATCGAAGAGGAGCTGCGCAAGCAGAA 1014
                                                                                  

consensus_8888#1      TAAACTTNTCCCCTTTGGCATATCTNCCTTACTNATCATCCACTTTATATCNCATANAAA 765
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      GCAATACGTGGCGTCGCGGACCG------------------------------------- 685
consensus_8888#0      GGAAGAGGCGGACCGCATCCAGCGCGAGCGGCGTGCCGAGGAGCGGCGCATACAGGACGA 1074
                                                                                  

consensus_8888#1      CTACCACTTAAAAAAATACACCCAACTCTTCTCTAACNCGGTCCACACACNTCATCGNCC 825
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      GAAGAACCGTCAGCTGGCGGAGAAGCAGCTCGCCATTGCGGAGGAGGTGGAGCGCCGAAG 1134
                                                                                  

consensus_8888#1      ACCCGNACAACCAATTAAATCTTAAATTTACAAAGNTTAACTTCCAGTTAAACNTAATAA 885
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      AAGGGAAGAGCTGGAGCAGATGAAGGAAGCGGACGGGCGCCGTGAGCGCCGCCCTGCAGC 1194
                                                                                  

consensus_8888#1      ACCACTTNATC------------------------------------------------- 896
consensus_8888#4      ------------------------------------------------------------
consensus_8888#3      ------------------------------------------------------------
consensus_8888#2      ------------------------------------------------------------
consensus_8888#0      GGGACCGGCCGAACCGAAGCCCGAGGAAAGCTGGCGCAAAGGACCGGCAGCCGCAGCACC 1254
                                                                                  

consensus_8888#1      -----------------------------------------------
consensus_8888#4      -----------------------------------------------
consensus_8888#3      -----------------------------------------------
consensus_8888#2      -----------------------------------------------
consensus_8888#0      CGCCAATCCTGCCGCCGACGAGCCGAAGAAGAACGTCTGGCAGGGTT 1301