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Anopheles gambiae
cluster # 8889 cluster # 8889       Sequences # 12       consensus # 6


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8889#0 length = 1746 sequences # 4  
consensus_8889#1 length = 1404 sequences # 3  
consensus_8889#2 length = 745 sequences # 1  
consensus_8889#3 length = 694 sequences # 2  
consensus_8889#4 length = 633 sequences # 1  
consensus_8889#5 length = 619 sequences # 1  

consensusID : consensus_8889#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1746
fasta sequence
                              [TACCTCACGCCCACCGTTTCCCACTCAATGCCCAACTCCAACGAAAACACTCCACGCTACGATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGTGAACAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAGCGCTTACTGGGCGCAAGTTTAGCGACCGTGTGGTCGTCACGTCGTACTTCGATCCAGATAAGTATCATCGGCGCGAATTTTAAGCGACTTTCTCCACATCAGTGCAGCTGCTGCGGGCTGCTGCTGCTGCTTATGGCGGGCGATCTCTGTGTGGTGTGCACAGTGACGAGCGCTGCAACTTTGAAACATCATAAATCTACACAATTCCATTCGCTTGAAGATTCCTGCCCGGACGCAGCTGTCCATAAGTCAACATTTTGGCATACTTTTACTAAGGAGAGGCACACATTGTTCATTTTTTTTTTTCNAACGTAGTGCAAGGTACCGCCGATCATTCGTGATAGCGGACACTGTGAATGATTTGGATCGAAATCTTTAAAACCGATTTCAAACCGATGTTTCAACAAACTTTTTAATTAGCCTAATTTAACTTAACAGAACTGATGCAACTGCACGTATTACGTGCTCACGTTATTTTGTCACTTGTTTAGGAAGTGAACCACTGAACAGGATGTATGCTACTTTCAACAAATTTTAACGTAACAACTGTTTGTATTTGCAAATCTAGTTGCGTTTCCCAACCGCAACCTCAAAAACCACAACAAAACAAAAAAAAAAAACAAAAAACCAAAAACTAAAAAACTCAAACGTTTCGGGACCCCAACAGTAATTATTAGATTTCAGTGTCCTACCCCTCCGCCGTCGCCACCCCCCGCTCCCCCCCCCCCCACGCCCCCACGCCCTCGGTTGCCTAGAGATTACCGTACACATCTGTCGTTCATCCTACCCCTCTAGCCAGCTCCCCAGTTGGCCGGCGCCTATTCTCCCTTGCAGACGCGACAACCCCCCCCACAGCCCCCCCCACCCAATATAGGCACCTATCAAAAATTAACCCCCACACCGAGGGACGTAAAATCAAGCTCTATACTCAGTACTCGACACCCACGACATGCACACTGAGACCCCAATAGTGACAGCCCACGAATAGTATACCGCCTCCCATCCTGCCTAGCACACACCACCCTCATGATGCTGGCTCTTATCTCTAATCGCGACGCCATCCACCACATCCGCGCCACCACACCCTCGGAATTTATAGAGAATCGCGACAACGCCCCGACGGCAAGCGTCCCGTCTACTCGCGTCAT]

[+] EMBL BX625236             [TACCTCACGCCCACCGTTTCCCACTCAATGCCCAACTCCAACGAAAACACTCCACGCTACGATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGTGAACAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAGCGCTTACTGGGCGCAAGTTTAGCGACCGTGTGGTCGTCACGTCGTACTTCGATCCAGATAAGTATCATCGGCGCGAATTTTAAGCGACTTTCTCCACATCAGTGCAGCTGCTGCGGGCTGCTGCTGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BX621923             [                                                                                                                                                                           CTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAGCGCTTACTGGGCGCAAGTTTAGCGACCGTGTGGTCGTCACGTCGTACTTCGATCCAGATAAGTATCATCGGCGCGAATTTTAAGCGACTTTCTCCACATCAGTGCAGCTGCTGCGGGCTGCTGCTGCTGCTTATGGCGGGCGATCTCTGTGTGGTGTGCACAGTGACGAGCGCTGCAACTTTGAAACATCATAAATCTACACAATTCCATTCGCTTGAAGATTCCTGCCCGGACGCAGCTGTCCATAAGTCAACATTTTGGCATACTTTTACTAAGGAGAGGCACACATTGTTCATTTTTTTTTTTCNAACGTAGTGCAAGGTACCGCCGATCATTCGTGATAGCGGACACTGTGAATGATTTGGATCGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM657771             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ccgATTTTGGCATACTTTTACTAAGGAGAGGCACACATTGTTCATTTTTTTTTTTCAAACGTAGTGCAAGGTACCGCCGATCATTCGTGATAGCGGACACTGTGAATGATTTGGATCGAAATCTTTAAAACCGATTTCAAACCGATGTTTCAACAAACTTTTTAATTAGCCTAATTTAACTTAACAGAACTGATGCAACTGCACGTATTACGTGCTCACGTTATTTTGTCACTTGTTTAGGAAGTGAACCACTGAACAGGATGTATGCTACTTTCAACAAATTTTAACGTAACAACTGTTTGTATTTGCAAATCTAGTTGCGTTTCCCAACCGCAACCTCAAAAACCACAACAAAACAAAAAAAAAAAACAAAAAACCAAAAACTAAAAAACTCAAACGTTTCGGGACCCCAACAGTAATTATTAGATTTCAGTGTCCTACCCCTCCGCCGTCGCCACCCCCCGCTCCCCCCCCCCCCACGCCCCCACGCCCTCGGTTGCCTAGAGATTACCGTACACATCTGTCGTTCATCCTACCCCTCTAGCCAGCTCCCCAGTTGGCCGGCGCCTATTCTCCCTTGCAGACGCGACAACCCCCCCCACAGCCCCCCCCACCCAATATAGGCACCTATCAAAAATTAACCCCCACACCGAGGGACGTAAAATCAAGCTCTATACTCAGTACTCGACACCCACGACATGCACACTGAGACCCCAATAGTGACAGCCCACGAATAGTATACCGCCTCCCATCCTGCCTAGCACACACCACCCTCATGATGCTGGCTCTTATCTCTAATCGCGACGCCATCCACCACATCCGCGCCACCACACCCTCGGAATTTATAGAGAATCGCGACAACGCCCCGACGGCAAGCGTCCCGTCTACTCGCGTCAT]
[+] EMBL BX608315             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TTCGTGATAGTGGACACTGTGAATGATTTGGATCGAAATCTTTAAAACCGATTTCAAACCGAGGTTTCAACAAACTTTTTAATTAGCCTAATTTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]


>consensus_8889#0 TACCTCACGCCCACCGTTTCCCACTCAATGCCCAACTCCAACGAAAACACTCCACGCTAC GATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGTGAACAGGTTAAGGAATTGCTGCTA TCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAA GGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGCTG AACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAG AACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTC GGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAG CTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAG TACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGC TGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAGCG CTTACTGGGCGCAAGTTTAGCGACCGTGTGGTCGTCACGTCGTACTTCGATCCAGATAAG TATCATCGGCGCGAATTTTAAGCGACTTTCTCCACATCAGTGCAGCTGCTGCGGGCTGCT GCTGCTGCTTATGGCGGGCGATCTCTGTGTGGTGTGCACAGTGACGAGCGCTGCAACTTT GAAACATCATAAATCTACACAATTCCATTCGCTTGAAGATTCCTGCCCGGACGCAGCTGT CCATAAGTCAACATTTTGGCATACTTTTACTAAGGAGAGGCACACATTGTTCATTTTTTT TTTTCNAACGTAGTGCAAGGTACCGCCGATCATTCGTGATAGCGGACACTGTGAATGATT TGGATCGAAATCTTTAAAACCGATTTCAAACCGATGTTTCAACAAACTTTTTAATTAGCC TAATTTAACTTAACAGAACTGATGCAACTGCACGTATTACGTGCTCACGTTATTTTGTCA CTTGTTTAGGAAGTGAACCACTGAACAGGATGTATGCTACTTTCAACAAATTTTAACGTA ACAACTGTTTGTATTTGCAAATCTAGTTGCGTTTCCCAACCGCAACCTCAAAAACCACAA CAAAACAAAAAAAAAAAACAAAAAACCAAAAACTAAAAAACTCAAACGTTTCGGGACCCC AACAGTAATTATTAGATTTCAGTGTCCTACCCCTCCGCCGTCGCCACCCCCCGCTCCCCC CCCCCCCACGCCCCCACGCCCTCGGTTGCCTAGAGATTACCGTACACATCTGTCGTTCAT CCTACCCCTCTAGCCAGCTCCCCAGTTGGCCGGCGCCTATTCTCCCTTGCAGACGCGACA ACCCCCCCCACAGCCCCCCCCACCCAATATAGGCACCTATCAAAAATTAACCCCCACACC GAGGGACGTAAAATCAAGCTCTATACTCAGTACTCGACACCCACGACATGCACACTGAGA CCCCAATAGTGACAGCCCACGAATAGTATACCGCCTCCCATCCTGCCTAGCACACACCAC CCTCATGATGCTGGCTCTTATCTCTAATCGCGACGCCATCCACCACATCCGCGCCACCAC ACCCTCGGAATTTATAGAGAATCGCGACAACGCCCCGACGGCAAGCGTCCCGTCTACTCG CGTCAT



consensusID : consensus_8889#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1404
fasta sequence
                              [CCGGTCAAAAACCGTGTTGTTGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAAAGTGATCAAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACTGATCACAATAGATAGAATGTCCGATCGTGATCGAGAATATCCGTGGTGGCGGAGGAGGAGGAGGTGGTCGTGGGTGGTGGCGGAGGGGGAGGAGGCGGCGGCGGTGGTGGTGGACGCCATCGTTCACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGATCGTCCCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTG-TACTGGGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGCAGGCGGCGGGGCAGATTCCGGCCAACATAGTGGCGGACACACCGCAGGCAGCCGTGCCCGTGGTGGGCTCGACCATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGGCGCAGGCGGCCGGCAACCCGGTGCTGGCCTGTCAGATCAATCTGGACAAAAACTTTGCGTTCCTGGAGTTCCGTTCGATCGACGAAACGACGCAAGCGATGGCATTCGACAGCATTAACTTTAAGGGGCAAAGCTTGAAAATTCGTCGACCGCACGATTACCAGCCAATGCCCGGTATGACTGATTCGGCCGCGGTCAACGTTCCCGAAAAATTCTCCGGTGTTATCAGCACAGTGGTACCGGACTCGCCGCACAAGATCTTCATCGGAGGTTTGCCGAACTATCTGAACGAGGACCAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAAGCGCAGCAAGCGCTTACTG]

[+] EMBL BM651934             [CCGGTCAAAAACCGTGTTGTTGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAAAGTGATCAAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACTGATCACAATAGATAGAATGTCCGATCGTGATCGAGAATATCCGTGGTGGCGGAGGAGGAGGAGGTGGTCGTGGGTGGTGGCGGAGGGGGAGGAGGCGGCGGCGGTGGTGGTGGACGCCATCGTTCACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGATCGTCCCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTGATACTGGGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGCAGGCGGCGGGGCAGATTCCGGCCAACATAGTGGCGGACACACCGCAGGCAGCCGTGCCCGTGGTGGGCTCGACCATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGGCGCAGGCGGCCGGCAACCCGGTGCTGGCCTGTCAGATCAATCTGGACAAAAACTTTGCGTTCCTGGAGTTCCGTTCGATCGACGAAACGACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM615331             [                                                                                                                                                                                                  ccgGGCGGAGGGGGAGGAGGCGGCGGCGGTGGTGGTGGACGCCATCGTTCACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGATCGTCCCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTG TACTGGGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGCAGGCGGCGGGGCAGATTCCGGCCAACATAGTGGCGGACACACCGCAGGCAGCCGTGCCCGTGGTGGGCTCGACCATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGGCGCAGGCGGCCGGCAACCCGGTGCTGGCCTGTCAGATCAATCTGGACAAAAACTTTGCGTTCCTGGAGTTCCGTTCGATCGACGAAACGACGCAAGCGATGGCATTCGACAGCATTAACTTTAAGGGGCAAAGCTTGAAAATTCGTCGACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM605550             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccGCATTCGACAGCATTAACTTTAAGGGGCAAAGCTTGAAAATTCGTCGACCGCACGATTACCAGCCAATGCCCGGTATGACTGATTCGGCCGCGGTCAACGTTCCCGAAAAATTCTCCGGTGTTATCAGCACAGTGGTACCGGACTCGCCGCACAAGATCTTCATCGGAGGTTTGCCGAACTATCTGAACGAGGACCAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAAGCGCAGCAAGCGCTTACTG]


>consensus_8889#1 CCGGTCAAAAACCGTGTTGTTGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCAT CGAAAAAGTGATCAAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACTG ATCACAATAGATAGAATGTCCGATCGTGATCGAGAATATCCGTGGTGGCGGAGGAGGAGG AGGTGGTCGTGGGTGGTGGCGGAGGGGGAGGAGGCGGCGGCGGTGGTGGTGGACGCCATC GTTCACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGAT CGTCCCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTGT ACTGGGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGC AGGCGGCGGGGCAGATTCCGGCCAACATAGTGGCGGACACACCGCAGGCAGCCGTGCCCG TGGTGGGCTCGACCATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCG GCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGG CGCAGGCGGCCGGCAACCCGGTGCTGGCCTGTCAGATCAATCTGGACAAAAACTTTGCGT TCCTGGAGTTCCGTTCGATCGACGAAACGACGCAAGCGATGGCATTCGACAGCATTAACT TTAAGGGGCAAAGCTTGAAAATTCGTCGACCGCACGATTACCAGCCAATGCCCGGTATGA CTGATTCGGCCGCGGTCAACGTTCCCGAAAAATTCTCCGGTGTTATCAGCACAGTGGTAC CGGACTCGCCGCACAAGATCTTCATCGGAGGTTTGCCGAACTATCTGAACGAGGACCAGG TTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCG CGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATC AGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTG CCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTAC CGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACA TGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTC GGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAG GGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCC AGAAAGCGCAGCAAGCGCTTACTG



consensusID : consensus_8889#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 745
fasta sequence
                              [AGGCAAGAATCGGCACGNTGGACGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCAGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAAGCGCTTACTGGGCGCAAGTTTAGCGACCGTGTGGTCGTCACGTCGTAACTTCGATCCAGATAAGTATCATCGGCGCGAATTTTAAGCGACTTTTCTACCACATCAGTGCAGCTGCTGCGGGCTGCTTGCTGCTGNTTATGGCGGCGCGATCTCCTGTGGTGGTGGTGCACCACGTGACCGAAGCGGCTGGCAAACTTTTGGAAACCATCATAAAATCTACGNAGCNAATNCATTCGCTTGAAGAGATTCCCTTGGCCCGAACGCAAGCTGGTCAATTCAAGNCACA]

[+] EMBL BX467214             [AGGCAAGAATCGGCACGNTGGACGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCAGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAAGCGCTTACTGGGCGCAAGTTTAGCGACCGTGTGGTCGTCACGTCGTAACTTCGATCCAGATAAGTATCATCGGCGCGAATTTTAAGCGACTTTTCTACCACATCAGTGCAGCTGCTGCGGGCTGCTTGCTGCTGNTTATGGCGGCGCGATCTCCTGTGGTGGTGGTGCACCACGTGACCGAAGCGGCTGGCAAACTTTTGGAAACCATCATAAAATCTACGNAGCNAATNCATTCGCTTGAAGAGATTCCCTTGGCCCGAACGCAAGCTGGTCAATTCAAGNCACA]


>consensus_8889#2 AGGCAAGAATCGGCACGNTGGACGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTAC GTCGAGTACACGGTTACGGATCAGGCAATTGCAGGGGCTGAACGGTATGCAGCTGGGCGA TAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGT CGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGAC CGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTA CGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGT CGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCAG AGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAAGCGCTTACTGGGCGCAAGTTT AGCGACCGTGTGGTCGTCACGTCGTAACTTCGATCCAGATAAGTATCATCGGCGCGAATT TTAAGCGACTTTTCTACCACATCAGTGCAGCTGCTGCGGGCTGCTTGCTGCTGNTTATGG CGGCGCGATCTCCTGTGGTGGTGGTGCACCACGTGACCGAAGCGGCTGGCAAACTTTTGG AAACCATCATAAAATCTACGNAGCNAATNCATTCGCTTGAAGAGATTCCCTTGGCCCGAA CGCAAGCTGGTCAATTCAAGNCACA



consensusID : consensus_8889#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 694
fasta sequence
                              [TGAAGCTACCATTTTCAGCTGTGAAACGCATTAGCCTCTCACGCGAAAAGCGCCTGGGGCTGGCGGTGGTGGAGGTTTTCTTTTGTAGGCAATACATTTTTCCCCAGGGCGAAGGGTGTTTTTAGGTCCGGCGGGCTAAAGTATAAGTGATGGAGCACAAAGGGTCCATGTTTCACGTTTGGCCACAAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCGTGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTG-CCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAGCGCTTACTG]

[+] EMBL BX605253             [TGAAGCTACCATTTTCAGCTGTGAAACGCATTAGCCTCTCACGCGAAAAGCGCCTGGGGCTGGCGGTGGTGGAGGTTTTCTTTTGTAGGCAATACATTTTTCCCCAGGGCGAAGGGTGTTTTTAGGTCCGGCGGGCTAAAGTATAAGTGATGGAGCACAAAGGGTCCATGTTTCACGTTTGGCCACAAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCGTGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTG CCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAGCGCTTACTG]
[+] EMBL BM583735             [                                                                                                                                                                                                                                                                     ccgAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACGGTTACGGATCAGGCAATTGCGGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTGGCACCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGCCTGCTGAACATGGTTACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGCCCCATCGAAGGGGTGGACGTGCCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCA              ]


>consensus_8889#3 TGAAGCTACCATTTTCAGCTGTGAAACGCATTAGCCTCTCACGCGAAAAGCGCCTGGGGC TGGCGGTGGTGGAGGTTTTCTTTTGTAGGCAATACATTTTTCCCCAGGGCGAAGGGTGTT TTTAGGTCCGGCGGGCTAAAGTATAAGTGATGGAGCACAAAGGGTCCATGTTTCACGTTT GGCCACAAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTC AAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACG GTTACGGATCAGGCAATTGCGTGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATC GTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAG ATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGC CTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTC GAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGC CCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATC GTCGACTGCCAGAAGGCGCAGCAAGCGCTTACTG



consensusID : consensus_8889#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 633
fasta sequence
                              [ATGTNAGCTCGAGCAGATTGCCAGAGGTTTATACCCATCGTTTACATGTTACCTCACGCCACCGTTTCCACTCAATGCCCAACTCCAACGAAAACACTCCACGCTACGATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGTGAACAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGCAGTACACGGTTACCGGATCACGCGCAANTTGCAGGGCCTGAAACGGTATGCAGCATGGGCCGCATAAGACAAGCTGACTCGTACAANCGTGCCACGCTAGTACGCGACGGCGAAACGAACTCGAACNGCGNGGCCGGTCGCTCGACAACCGGGTCCAGGATATCAGGGTACCAGGGTACTTATACGGCATAGTACCGAGGTTCGTACCGGCGAGTCCACGCGAACCGAAGAGATTGCTTGTGACCATGCTTGAACCATGGTCACCGCCAGGGAACGAGGCGTAGAACGGGACCGAGGAAGGAGTACCGAGGGANCACATTCTCCGGAGGACATTCGGNGAGGACGTGCAAACGAAGGATACNGGGTAGTGGNTTGCGGAA]

[+] EMBL AL696755             [ATGTNAGCTCGAGCAGATTGCCAGAGGTTTATACCCATCGTTTACATGTTACCTCACGCCACCGTTTCCACTCAATGCCCAACTCCAACGAAAACACTCCACGCTACGATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGTGAACAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGCAGTACACGGTTACCGGATCACGCGCAANTTGCAGGGCCTGAAACGGTATGCAGCATGGGCCGCATAAGACAAGCTGACTCGTACAANCGTGCCACGCTAGTACGCGACGGCGAAACGAACTCGAACNGCGNGGCCGGTCGCTCGACAACCGGGTCCAGGATATCAGGGTACCAGGGTACTTATACGGCATAGTACCGAGGTTCGTACCGGCGAGTCCACGCGAACCGAAGAGATTGCTTGTGACCATGCTTGAACCATGGTCACCGCCAGGGAACGAGGCGTAGAACGGGACCGAGGAAGGAGTACCGAGGGANCACATTCTCCGGAGGACATTCGGNGAGGACGTGCAAACGAAGGATACNGGGTAGTGGNTTGCGGAA]


>consensus_8889#4 ATGTNAGCTCGAGCAGATTGCCAGAGGTTTATACCCATCGTTTACATGTTACCTCACGCC ACCGTTTCCACTCAATGCCCAACTCCAACGAAAACACTCCACGCTACGATGCGCTGCTGC TGTACGATCGTTCCCGCAACTGTGAACAGGTTAAGGAATTGCTGCTATCGTTCGGTCAAC TGAAAGCGTTCAATCTGGTCAAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTG CCGAGTACGTCGCAGTACACGGTTACCGGATCACGCGCAANTTGCAGGGCCTGAAACGGT ATGCAGCATGGGCCGCATAAGACAAGCTGACTCGTACAANCGTGCCACGCTAGTACGCGA CGGCGAAACGAACTCGAACNGCGNGGCCGGTCGCTCGACAACCGGGTCCAGGATATCAGG GTACCAGGGTACTTATACGGCATAGTACCGAGGTTCGTACCGGCGAGTCCACGCGAACCG AAGAGATTGCTTGTGACCATGCTTGAACCATGGTCACCGCCAGGGAACGAGGCGTAGAAC GGGACCGAGGAAGGAGTACCGAGGGANCACATTCTCCGGAGGACATTCGGNGAGGACGTG CAAACGAAGGATACNGGGTAGTGGNTTGCGGAA



consensusID : consensus_8889#5
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 619
fasta sequence
                              [CCGCCCACGCGTCCGGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAAAGTGATCAAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACCGATCACAATAGATAGAATGTCCGATCGTGATCGAGAATATCGTGGTGGCGGAGGAGGAGGAGGTGGTCGTGGGTGGTGGCGGAGGAGGAGGAGGCGGCGGTGGTGGTGGTGGTGGACGCCATCGTTCACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGATCGTCCCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTGTACTGGGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGCAAGCGGCGGGACAGATTCCGGCCAACATAGTGGCAGACACGCCGCAAGCTGCCGTGCCCGTGGTGGGCTCGACGATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGGCACAGGCGGCCGGCAACCCGGTG]

[+] EMBL BM633284             [CCGCCCACGCGTCCGGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAAAGTGATCAAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACCGATCACAATAGATAGAATGTCCGATCGTGATCGAGAATATCGTGGTGGCGGAGGAGGAGGAGGTGGTCGTGGGTGGTGGCGGAGGAGGAGGAGGCGGCGGTGGTGGTGGTGGTGGACGCCATCGTTCACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGATCGTCCCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTGTACTGGGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGCAAGCGGCGGGACAGATTCCGGCCAACATAGTGGCAGACACGCCGCAAGCTGCCGTGCCCGTGGTGGGCTCGACGATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGGCACAGGCGGCCGGCAACCCGGTG]


>consensus_8889#5 CCGCCCACGCGTCCGGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAA AGTGATCAAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACCGATCACA ATAGATAGAATGTCCGATCGTGATCGAGAATATCGTGGTGGCGGAGGAGGAGGAGGTGGT CGTGGGTGGTGGCGGAGGAGGAGGAGGCGGCGGTGGTGGTGGTGGTGGACGCCATCGTTC ACGGTCCCGCGAGCGTCGTCGCAGCCGGTCCCGGAGCAGGGGAGAACGGAGAAGATCGTC CCGGTCCCGCTCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAAGCCGTCCCTGTACTG GGATGTTCCACCGCCCGGTTTCGAGCACATTACGCCGCTACAGTACAAGGCGATGCAAGC GGCGGGACAGATTCCGGCCAACATAGTGGCAGACACGCCGCAAGCTGCCGTGCCCGTGGT GGGCTCGACGATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAACATACCGTTCGGCGT GACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTTTCCGGGCTGGCACA GGCGGCCGGCAACCCGGTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8889#0      ------------------------------------------------------------
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      TGAAGCTACCATTTTCAGCTGTGAAACGCATTAGCCTCTCACGCGAAAAGCGCCTGGGGC 60
consensus_8889#4      -----------------------------------ATGTNAGCTCGAGCAGATTGCCAGA 25
consensus_8889#1      -----------------------------------------------CCGGTCAAAAACC 13
consensus_8889#5      -----------------------------------------------CCGCCCA-----C 8
                                                                                  

consensus_8889#0      ------------------------TACCTCACGCCCACCGTTTCCCACTCAATGCCCAAC 36
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      TGGCGGTGGTGGAGGTTTTCTTTTGTAGGCAATACATTTTTCCCCAGGGCGAAGGGTGTT 120
consensus_8889#4      GGTTTATACCCATCGTTTACATGTTACCTCACGCCACCGTTTCC--ACTCAATGCCCAAC 83
consensus_8889#1      GTGTTGTTGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAAAGTGATC 73
consensus_8889#5      GCGTC-CGGCCGCTTTTTCCCAAGCACGGAAAAGAAAAGTTTTGCATCGAAAAAGTGATC 67
                                                                                  

consensus_8889#0      TCCAACGAAAACACTCCACGCTACGATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGT 96
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      TTTAGGTCCGGCGGGCTAAAGTATAAGTGATGGAGCACAAAGGGTCCATGTTTCACGTTT 180
consensus_8889#4      TCCAACGAAAACACTCCACGCTACGATGCGCTGCTGCTGTACGATCGTTCCCGCAACTGT 143
consensus_8889#1      AAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACTGATCACAATAGATA 133
consensus_8889#5      AAAAACGGCAGAAACCATCACTCATCGGCGAGAAAATCGTTCAACCGATCACAATAGATA 127
                                                                                  

consensus_8889#0      GAACA---GGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTC 153
consensus_8889#2      -------------------------------------------AGGCAAG-AATCGGCAC 16
consensus_8889#3      GGCCACAAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTC 240
consensus_8889#4      GAACA---GGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTC 200
consensus_8889#1      GAATGTCCGATCGTG--ATCGAGAATATCCGTGGT---GGCGGAGGAGGAGGAGGTGGTC 188
consensus_8889#5      GAATGTCCGATCGTG--ATCGAGAATATC-GTGGT---GGCGGAGGAGGAGGAGGTGGTC 181
                                                                 * *      *   *  *

consensus_8889#0      AAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGA-GTACGTCG-AGTACA 211
consensus_8889#2      GNTGG----ACGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGA-GTACGTCG-AGTACA 70
consensus_8889#3      AAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGA-GTACGTCG-AGTACA 298
consensus_8889#4      AAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGA-GTACGTCGCAGTACA 259
consensus_8889#1      GTGGGTGGTGGCGGAGGGGGAGGAGGCGGCGGCGGTGGTGGTGG---ACGCCATCGTTCA 245
consensus_8889#5      GTGGGTGGTGGCGGAGGAGGAGGAGGCGGCGGTGGTGGTGGTGGTGGACGCCATCGTTCA 241
                         *           **    **    **    *    **  *    *** *   ** **

consensus_8889#0      CGGTTAC-GGATCAGGC---AATTGCAGGG-CTGAA-CGGTATGCAGC-TGGGCGATAAA 264
consensus_8889#2      CGGTTAC-GGATCAGGC---AATTGCAGGGGCTGAA-CGGTATGCAGC-TGGGCGATAAA 124
consensus_8889#3      CGGTTAC-GGATCAGGC---AATTGCGTGG-CTGAA-CGGTATGCAGC-TGGGCGATAAA 351
consensus_8889#4      CGGTTACCGGATCACGCGCAANTTGCAGGGCCTGAAACGGTATGCAGCATGGGCCGCATA 319
consensus_8889#1      CGGTCCCGCGAGCGTCG--TCGCAGCCGGTCCCGGAGCAGGGGAGAAC--GGAGAAGATC 301
consensus_8889#5      CGGTCCCGCGAGCGTCG--TCGCAGCCGGTCCCGGAGCAGGGGAGAAC--GGAGAAGATC 297
                      ****  *  ** *           **  *  * * * * *     * *  **     *  

consensus_8889#0      AAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCA 324
consensus_8889#2      AAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCA 184
consensus_8889#3      AAGCTGATCGTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCA 411
consensus_8889#4      AGACAAGCTG--------ACTCGTACAANCGTGCCACGCTAGTACGCGAC----GGCGAA 367
consensus_8889#1      GTCCCGGTCCCGC---TCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAA---GCCGTC 355
consensus_8889#5      GTCCCGGTCCCGC---TCGCCGTACCGGAAGCACCGTTCCCGTAGGCGCAA---GCCGTC 351
                         *               *          *       *  * * ***      * **  

consensus_8889#0      CCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAG 384
consensus_8889#2      CCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAG 244
consensus_8889#3      CCGGTCCAGATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAG 471
consensus_8889#4      ACGAACTCGAACNGCGNGGCCGGTCGCTCGACAACCGGGTCCAGGATATCAGGGTACCAG 427
consensus_8889#1      CCTGTACTGGGATGTTCCACCGCCCGGTTTCGAGCACATT--ACGCCGCTACAGTACAAG 413
consensus_8889#5      CCTGTACTGGGATGTTCCACCGCCCGGTTTCGAGCACATT--ACGCCGCTACAGTACAAG 409
                       *      *          * *  *  *    *      *    *     *  *  * **

consensus_8889#0      GTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAG 444
consensus_8889#2      GTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAG 304
consensus_8889#3      GTGCTGTGCCTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAG 531
consensus_8889#4      G----GTACTTATACGGCATAGTACCGAGGTTCGTACCGGCGAGTCCACGCGAAC-CGAA 482
consensus_8889#1      GCGATGCAGGCGGCGGGGCAGATTCCGGCCAACATAGTGGCGGACACACCGCAG---GCA 470
consensus_8889#5      GCGATGCAAGCGGCGGGACAGATTCCGGCCAACATAGTGGCAGACACGCCGCAA---GCT 466
                      *    *                *  **     *     *             *    *  

consensus_8889#0      GACATT-CTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTG-GTGCG-GAGCGTC 501
consensus_8889#2      GACATT-CTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTG-GTGCG-GAGCGTC 361
consensus_8889#3      GACATT-CTCGAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTG-GTGCG-GAGCGTC 588
consensus_8889#4      GAGATTGCTTGTGACCATGCTTGAACCATG-GTCAC---CGCCAGG-GAACG-AGGCGTA 536
consensus_8889#1      GCCGTGCCCGTGGTGGGCTCGACCATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAAC 530
consensus_8889#5      GCCGTGCCCGTGGTGGGCTCGACGATTACGCGCCAGGCGCGCCGGCTGTACGTGGGCAAC 526
                      *   *  *    *      *         *   **    **      *  **   **   

consensus_8889#0      GAAATCCCGCGCCCCATCGAAGGGGT---GGACGTGCCCGGCTGTGGCAAGGTGT--TTG 556
consensus_8889#2      GAAATCCCGCGCCCCATCGAAGGGGT---GGACGTGCCCGGCTGTGGCAAGGTGT--TTG 416
consensus_8889#3      GAAATCCCGCGCCCCATCGAAGGGGT---GGACGTGCCCGGCTGTGGCAAGGTGT--TTG 643
consensus_8889#4      GAA----CGGGACCGAG-GAAGGAGTACCGAGGGANCACATTCTCCGGAGGACAT--TCG 589
consensus_8889#1      ATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTT 590
consensus_8889#5      ATACCGTTCGGCGTGACGGAGGAGGAGATGATGGAGTTCTTCAACCAGCAGATGCACCTT 586
                        *       *    *  ** *  *    *   *    *           *         

consensus_8889#0      TC-GAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAA-GCGCTTACTGGGCGCAA 614
consensus_8889#2      TCAGAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAAAGCGCTTACTGGGCGCAA 476
consensus_8889#3      TC-GAGTTCAACTCGATCGTCGACTGCCAGAAGGCGCAGCAA-GCGCTTACTG------- 694
consensus_8889#4      GN-GAGGACG-TGCAAACGAAGGATACNGGGTAGTGGNTTGCGGAA-------------- 633
consensus_8889#1      TCCGGGCTGGCGCAGGCGGCCGGCAACCCGGTGCTGGCCTGTCAGATCAATCTGGACAAA 650
consensus_8889#5      TCCGGGCTGGCACAGGCGGCCGGCAACCCGGTG--------------------------- 619
                         * *            *  *    *  *                              

consensus_8889#0      GTTTAGCGACCGTGTGGTCGTCACGTCGTA-CTTCGATCCAGATAAGTATCATCGGCGCG 673
consensus_8889#2      GTTTAGCGACCGTGTGGTCGTCACGTCGTAACTTCGATCCAGATAAGTATCATCGGCGCG 536
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      AACTTTGCGTTCCTGGAGTTCCGTTCGATCGACGAAACGACGCAAGCGATGGCATTCGAC 710
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      AATTTTAAGCGACTTTCT--CCACATCAGTGCAGCTGCTGCGGGCTGCT-GCTGCTGCTT 730
consensus_8889#2      AATTTTAAGCGACTTTTCTACCACATCAGTGCAGCTGCTGCGGGCTGCTTGCTGCTGNTT 596
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      AGCATTAACTTTAAGGGGCAAAGCTTGAAAATTCGTCGACCGCACGATTACCAGCCAATG 770
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      ATGGCGG-GCGATCTC-TGTG----TGGTGTGCACAGTGACGAGCGCTGC-----AACTT 779
consensus_8889#2      ATGGCGGCGCGATCTCCTGTGGTGGTGGTGCACCACGTGACCGAAGCGGCTGGCAAACTT 656
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      CCCGGTATGACTGATTCGGCCGCGGTCAACGTTCCCGAAAAATTCTCCGGTGTTATCAGC 830
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      T---GAAACATCATAAA-TCTACACAATT---CCATTCGCTTGAAGATTCCTGCCCGGAC 832
consensus_8889#2      TTGGAAACCATCATAAAATCTACGNAGCNAATNCATTCGCTTGAAGAGATTC-CCTTGGC 715
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ACAGTGGTACCGGACTCGCCGCACAAGATCTTCATCGGAGGTTTGCCGAACTATCTGAAC 890
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      GCAGCTGTCCATAAGTCAACATTTTGGCATACTTTTACTAAGGAGAGGCACACATTGTTC 892
consensus_8889#2      CCGAACGCAAGCTGGTCAAT-TCAAGNCACA----------------------------- 745
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      GAGGACCAGGTTAAGGAATTGCTGCTATCGTTCGGTCAACTGAAAGCGTTCAATCTGGTC 950
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      ATTTTTTTTTTTCNAACGTAGTGCAAGGTACCGCCGATCATTCGTGATAGCGGACACTGT 952
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      AAGGACGCCGCGACCGGGCTGGGTAAAGGTTATGCCTTTGCCGAGTACGTCGAGTACACG 1010
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      GAATGATTTGGATCGAAATCTTTAAAACCGATTTCAAACCGATGTTTCAACAAACTTTTT 1012
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      GTTACGGATCAGGCAATTGCAGGGCTGAACGGTATGCAGCTGGGCGATAAAAAGCTGATC 1070
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      AATTAGCCTAATTTAACTTAACAGAACTGATGCAACTGCACGTATTACGTGCTCACGTTA 1072
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      GTACAACGTGCCAGTGTAGGAGCGAAGAACTCGAACGCGGCCGTCGTCGCACCGGTCCAG 1130
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      TTTTGTCACTTGTTTAGGAAGTGAACCACTGAACAGGATGTATGCTACTTTCAACAAATT 1132
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ATTCAGGTACCGGGTCTTTCGCTAGTCGGTTCGTCGGGTCCACCGACCGAGGTGCTGTGC 1190
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      TTAACGTAACAACTGTTTGTATTTGCAAATCTAGTTGCGTTTCCCAACCGCAACCTCAAA 1192
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      CTGCTGAACATGGTCACGCCGGACGAGCTGAAGGACGAGGAAGAGTACGAGGACATTCTC 1250
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      AACCACAACAAAACAAAAAAAAAAAACAAAAAACCAAAAACTAAAAAACTCAAACGTTTC 1252
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      GAGGACATTCGGGAGGAGTGCAACAAGTACGGTGTGGTGCGGAGCGTCGAAATCCCGCGC 1310
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      GGGACCCCAACAGTAATTATTAGATTTCAGTGTCCTACCCCTCCGCCGTCGCCACCCCCC 1312
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      CCCATCGAAGGGGTGGACGTGCCCGGCTGTGGCAAGGTGTTTGTCGAGTTCAACTCGATC 1370
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      GCTCCCCCCCCCCCCACGCCCCCACGCCCTCGGTTGCCTAGAGATTACCGTACACATCTG 1372
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      GTCGACTGCCAGAAAGCGCAGCAAGCGCTTACTG-------------------------- 1404
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      TCGTTCATCCTACCCCTCTAGCCAGCTCCCCAGTTGGCCGGCGCCTATTCTCCCTTGCAG 1432
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ------------------------------------------------------------
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      ACGCGACAACCCCCCCCACAGCCCCCCCCACCCAATATAGGCACCTATCAAAAATTAACC 1492
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ------------------------------------------------------------
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      CCCACACCGAGGGACGTAAAATCAAGCTCTATACTCAGTACTCGACACCCACGACATGCA 1552
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ------------------------------------------------------------
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      CACTGAGACCCCAATAGTGACAGCCCACGAATAGTATACCGCCTCCCATCCTGCCTAGCA 1612
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ------------------------------------------------------------
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      CACACCACCCTCATGATGCTGGCTCTTATCTCTAATCGCGACGCCATCCACCACATCCGC 1672
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ------------------------------------------------------------
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      GCCACCACACCCTCGGAATTTATAGAGAATCGCGACAACGCCCCGACGGCAAGCGTCCCG 1732
consensus_8889#2      ------------------------------------------------------------
consensus_8889#3      ------------------------------------------------------------
consensus_8889#4      ------------------------------------------------------------
consensus_8889#1      ------------------------------------------------------------
consensus_8889#5      ------------------------------------------------------------
                                                                                  

consensus_8889#0      TCTACTCGCGTCAT 1746
consensus_8889#2      --------------
consensus_8889#3      --------------
consensus_8889#4      --------------
consensus_8889#1      --------------
consensus_8889#5      --------------
                                    




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)