cluster # 8895

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Anopheles gambiae
cluster # 8895 cluster # 8895 Sequences # 12 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_8895#0 length = 1439 sequences # 9
consensus_8895#1 length = 649 sequences # 1

consensus_8895#2 length = 633 sequences # 1
consensus_8895#3 length = 515 sequences # 1

consensusID : consensus_8895#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1439
fasta sequence

                              [CCCGAGGTTNTTGGTGCCCCGGAGCGTGTTTTTCCATACACACACACATACCCACTGGACAATGCGGAAGTGTGTGCCGTGATAAGGTGTAGTTCCAGCGCATAAAATTGCCTATTCATCGTGCGTTGATATCAGCAGCATCAGTTGACAACGCGCA-CACACGGCGGAAGTGTGCCAGC-CA--------CAAAACCCCTGTACCGCAAGG--AGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGTGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATCGTTCAGCGGACAGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTG-GAG-GAGCAC-GATC-GGCAACATGACGTGGAGGAGGTGC-GCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGAACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATC-GGCTGATCCC-GC-TGCTACC-GAAGCA-CATGA-GCTTTC-TGGCGCTGG-ACC-TTCCC-G-GCCA-TGGGC-TGTCCTCCCGCATCCCGGACGG--CATGATGTACCACACGCTGGACAACACGCTCAGCCTGTT-CCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCC-TGTTCACCTCAACCTTC-CCCGATAAGGTCGACTTTTACATTGGCATCGA-TGCGCTCAAACCTCACATTGCCGATGCGGCCAAATTCCCGGG--TCGGTTGGAAAAACGCCTGCCCCAGTCACTGCTGGCGGATGCGAGGAATCGGGAAAAGTCCGAACCACCGGCCTACCCGTACGAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACGCGTGAGGCAGCTCCTTTTCTGCTGTATCGTAACACGCGCAAATCAACGCTCCATCCCGACCGGTACTACTTTACGCGGGACAGCCGGCTAAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAATTTGGAGC-TGCCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCCGTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCCACAGTTTGAGCTGTAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGGAAAGGTGGTGCCGATTGTGGGACGGTTTCTCGGCCAGTACTGGAAGGGAGAGAGAGGATGAAATGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAGAGTAACAAAAATAAGGGATTGAAAGAATTAACTTTACTACCTCGACGGGATGTTTTACCTGGATAGACGTTTCATAATTGCAATAAATGCGAAAATTAATTGAG]

[+] EMBL AL932071             [CCCGAGGTTNTTGGTGCCCCGGAGCGTGTTTTTCCATACACACACACATACCCACTGGACAATGCGGAAGTGTGTGCCGTGATAAGGTGTAGTTCCAGCGCATAAAATTGCCTATTCATCGTGCGTTGATATCAGCAGCATCAGTTGACAACGCGCA CACACGGCGGAAGTGTGCCAGC CA        CAAAACCCCTGTACCGCAAGG  AGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGTGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATCGTTCAGCGGACAGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTG GAG GAGCAC GATC GGCAACATGACGTGGAGGAGGTGC GCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGAACGTACGG CGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM603819             [                     GAGCGTGTTTTTCCATACACACACACATACCCACTGGACAATGCGGAAGTGTGTGCCGTGATAAGGTGTAGTTCCAGCGCATAAAATTGCCTATTCATCGTGCGTTGATATCAGCAGCATCAGTTGACAACGCGCA CACACGGCGGAAGTGTGCCAGC CA        CAAAACCCCTGTACCGCAAGG  AGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGTGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATCGTTCAGCGGACAGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTG GAG GAGCAC GATC GGCAACATGACGTGGAGGAGGTGC GCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGAACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATC GGCTGATCCC GC TGCTACC GAAGCA CATGA GCTTTC TGGCGCTGG ACCTTTCCC G GGCA TGGGC TGTCCTCCCGCATCCCGGACGG  CATGATGTACCACACGCTGGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX606253             [                                                                                GATAAGGTGTAGTTCCAGCGCATAAAATTGCCTATTCATCGTGCGTTGATATCAGCAGCATCAGTTGACAACGCACAGCACACGGCGGGAGTGTGCCAGCACAGTTCGCCTCAAAACCCCTGTACCGCAAGG  AGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGCGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATTGTTCAGCGGACGGCCGTACGATACAGCCATCACCATCAGGCGCACGATCTGGTG GAG GAGCAC GATC GGCAACATGACGTGGAGGAGGTGC GCATTCCGGTGCCGTACGGTGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATC GGCTGATCCC GC TGCTACC GAAGCA CATGA GCTTCC TGGCACTGG ACC TTCCC G GCCA TGGAC TGTCCTCCCGCATCCCGGACGG  CATGATGTACCACACGCTGGACAACACGCTCAGCCTGTT CCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCC TGTTCACCTCAACCTTC CCCGATAAGGTCGACTTTTACATTGGCATCGA TGCGCTTAAACCTCACATTGCCGATGCGGCCAAATTCCCGGG  TC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX605707             [                                                                                                                                                              CACACGGCGGAAGTGTGCCAGC CA        CAAAACCCCTGTACCGCAAGG  AGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGTGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATCGTTCAGCGGACAGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTG GAG GAGCAC GATC GGCAACATGACGTGGAGGAGGTGC GCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGAACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATC GGCTGATCCC GC TGCTACC GAAGCA CATGA GCTTTC TGGCGCTGGAACC TT CC G GCCA TGGGC TGTCCTCCCGCATCCCGGACGG  CATGATGTACCACACGCTGGACAACACGCTCAGCCTGTTCCCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGG CACTCGATGGGTTCCATCATA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AL694168             [                                                                                                                                                                                                        gaatCCCCGAGGTTAGAAGGTCATTTCATCACCATGGTGGTTAGTGGCAGTNGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATCGTTCAGCGGACAGCCGTACGATACAG CATCACCACCAGGCGCACGATCTGGTGTGAGTGAGCACTGATCTGGCAACATGACGTGGAGGAGGTGCTGCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGAACGTACGG CGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATCTGGCTGATCCCTGCTTGCTACCTGAAGCA CATGAGGCTTTCTTGGCGCTGG ACC TTCCCTGNGCCATTGGGCTTGTCCTCCCGGATCCCGGACGGGCCATGATGTAACACACGCTGGACAACACGCTCAG CTGTT CCACGTGATGCGCGAGTACCG TGGAAGAAGCTCTCGCTAATTGGGCACTCGATGGGTTCCATCATAAGCTTCCTTGTTCACCTCAA CTTCACCCGATAAGGTCGACTTTTACATTGGCATCGATTGCGCTCAAAGCTCACATTGCCGATGCGGGCAAATTCCCGGGGATCGGTTGGAAAAcg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09F4V             [                                                                                                                                                                                                                                                                                                   CCCACGAAACGAGAGGAATCGTTCAGCGGACGGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTG GAG GAGCAC GATC GGCAACATGACGTGGAGGAGGTGC GCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATC GGCTGATCCC GC TGCTACC GAAGCA CATGA GCTTTC TGGCGCTGG ACC TTCCC G GCCA TGGGC TGTCCTCCCGCATCCCGGACGG  CATGATGTACCACACGCTGGACAACACGCTCAGCCTGTT CCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCC TGTTCACCTCAACCTTC CCCGATAAGGTCGACTTTTACATTGGCATCGA TGCGCTCAAACCTCACATTGCCGATGCGGCCAAATTCCCGGG  TCGGTTGGAAAAACGCCTGCCCCAGTCACTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS095TJ             [                                                                                                                                                                                                                                                                                                   CCCACGAAACGAGAGGAATCGTTCAGCGGACGGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTG GAG GAGCAC GATC GGCAACATGACGTGGAGGAGGTGC GCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATC GGCTGATCCCTGC TGCTACC GAAGCACCATGA GCTTTC TGGCGCTGG ACC TTCCC G GCCA TGGGC TGTCCTCCCGCATCCCGGACGG  CATGATGTACCACACGCTGGACAACACGCTCAGCCTGTT CCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX617201             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TACATTGGCATCGA TGCGCTCAAACCTCACATTGCCGATGCGGCCAAATTCCCGGG  TCGGTTGGAAAAACGCCTGCCCCAGTCACTGCTGGCGGATGCGAGGAATCGGGAAAAGTCCGAACCACCGGCCTACCCGTACGAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACGCGTGAGGCAGCTCCTTTTCTGCTGTATCGTAACACGCGCAAATCAACGCTCCATCCCGACCGGTACTACTTTACGCGGGACAGCCGGCTAAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAATTTGGAGC TGCCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCCGTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCCACAGTTTGAGCTGTAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGGAAAGGTGGTGCCGATTGTGGGACGGTTTCTCGGCCAGTACTGGAAGGGAGAGAGAG                                                                                                                                                                  ]
[+] EMBL BX609349             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACTTTACGCGGGACAGCCGGCTAAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAATTTGGAGCTTGCCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCCGTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCCACAGTTTGAGCTGGAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGAAAAGGTGGTGCCGATTGTGGGACGGTTTCTCGGCAAGTACTGGAAGGAGGAGAGAGGATGAAATGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAGAGTAACAAAAATAAGGGATTGAAAGAATTAACTTTACTACCTCGACGGGATGTTTTACCTGGATAGACGTTTCATAATTGCAATAAATGCGAAAATTAATTGAG]




>consensus_8895#0
CCCGAGGTTNTTGGTGCCCCGGAGCGTGTTTTTCCATACACACACACATACCCACTGGAC
AATGCGGAAGTGTGTGCCGTGATAAGGTGTAGTTCCAGCGCATAAAATTGCCTATTCATC
GTGCGTTGATATCAGCAGCATCAGTTGACAACGCGCACACACGGCGGAAGTGTGCCAGCC
ACAAAACCCCTGTACCGCAAGGAGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGTG
GTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATCG
TTCAGCGGACAGCCGTACGATACAGCCATCACCACCAGGCGCACGATCTGGTGGAGGAGC
ACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTACGGGGAGATTGCCG
GCAAGTGGTGGGGCCCACGGAACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATA
ATGCGGGCACGTTCGATCGGCTGATCCCGCTGCTACCGAAGCACATGAGCTTTCTGGCGC
TGGACCTTCCCGGCCATGGGCTGTCCTCCCGCATCCCGGACGGCATGATGTACCACACGC
TGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGC
TAATGGGCCACTCGATGGGTTCGATCATAAGCTTCCTGTTCACCTCAACCTTCCCCGATA
AGGTCGACTTTTACATTGGCATCGATGCGCTCAAACCTCACATTGCCGATGCGGCCAAAT
TCCCGGGTCGGTTGGAAAAACGCCTGCCCCAGTCACTGCTGGCGGATGCGAGGAATCGGG
AAAAGTCCGAACCACCGGCCTACCCGTACGAGGAGCTAATAGAACGGCTGCATCTTGGCA
CGAACAAATCGGTCACGCGTGAGGCAGCTCCTTTTCTGCTGTATCGTAACACGCGCAAAT
CAACGCTCCATCCCGACCGGTACTACTTTACGCGGGACAGCCGGCTAAAGTACGGGCTGG
GGATGGGCTGGGATCAGGCGATCAATTTGGAGCTGCCAAGCGGGTGGTGCAGCCGTACCT
GTTCATCAAGGCGAAACACTCGCCGTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGT
GGAGCTGGTGAAGCGGAACAATCCACAGTTTGAGCTGTAGTTTGTGGACAGCACGCATCA
TCTGCATCTGACCGAGCCGGGAAAGGTGGTGCCGATTGTGGGACGGTTTCTCGGCCAGTA
CTGGAAGGGAGAGAGAGGATGAAATGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAA
TTTATTGATTTAGAGAGTAACAAAAATAAGGGATTGAAAGAATTAACTTTACTACCTCGA
CGGGATGTTTTACCTGGATAGACGTTTCATAATTGCAATAAATGCGAAAATTAATTGAG

consensusID : consensus_8895#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 649
fasta sequence

                              [TGCGCTCAACCCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTTGGAAAAACGCCTGCCCCAGTTACTGCTGGCGGATGCGAGGAATCGGGAAAAGTCCGAACCACCGGCCTACCCGTACGAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACCCGTGAGGCGGCTCCGTTTCTGCTGTATCGTTACACGCGCAAATCAACGCTCCATCCCGACCGGTACTACTTTACGCGGGACAGCCGGCTGAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAATTTGGAGCTTGTCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCCGTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCCACAGTTTGAGCTGGAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGAAAAGGTGGTGCCGATTGTGGGACGGTTTCTCGGCAAGTACTGGAAGGAGGAGAGAGGATGAAATGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAGAGTAACAAAAATAAAGGATTGAAAGAATTAACTTTACTACCTCGAAAAAAAAAAAAAA]

[-] EMBL CNS09F4W             [TGCGCTCAACCCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTTGGAAAAACGCCTGCCCCAGTTACTGCTGGCGGATGCGAGGAATCGGGAAAAGTCCGAACCACCGGCCTACCCGTACGAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACCCGTGAGGCGGCTCCGTTTCTGCTGTATCGTTACACGCGCAAATCAACGCTCCATCCCGACCGGTACTACTTTACGCGGGACAGCCGGCTGAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAATTTGGAGCTTGTCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCCGTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCCACAGTTTGAGCTGGAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGAAAAGGTGGTGCCGATTGTGGGACGGTTTCTCGGCAAGTACTGGAAGGAGGAGAGAGGATGAAATGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAGAGTAACAAAAATAAAGGATTGAAAGAATTAACTTTACTACCTCGAAAAAAAAAAAAAA]




>consensus_8895#1
TGCGCTCAACCCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTTGGAAAAACGCCT
GCCCCAGTTACTGCTGGCGGATGCGAGGAATCGGGAAAAGTCCGAACCACCGGCCTACCC
GTACGAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACCCGTGAGGC
GGCTCCGTTTCTGCTGTATCGTTACACGCGCAAATCAACGCTCCATCCCGACCGGTACTA
CTTTACGCGGGACAGCCGGCTGAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAA
TTTGGAGCTTGTCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCC
GTACTACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCC
ACAGTTTGAGCTGGAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGAAAA
GGTGGTGCCGATTGTGGGACGGTTTCTCGGCAAGTACTGGAAGGAGGAGAGAGGATGAAA
TGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAGAGTAACAAA
AATAAAGGATTGAAAGAATTAACTTTACTACCTCGAAAAAAAAAAAAAA

consensusID : consensus_8895#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 633
fasta sequence

                              [ACCCACGCGTCCGGCAGCATCAGTTGACAACGCACAGCACACGGCGGGAGTGTGCCAGCACAGTTCGCCTCAAAACCCCTGTACCGCAAGGAGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGCGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATTGTTCAGCGGACGGCCGTACGATACAGCCATCACCATCAGGCGCACGATCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTACGGTGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATCGGCTGATCCCGCTGCTACCGAAGCACATGAGCTTCCTGGCACTGGACCTTCCCGGCCATGGACTGTCCTCCCGCATCCCGGACGGCATGATGTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCCTGTTCACCTCAACCTTCCCCGATAAGGTCGACTTTTACATTGGCATCG]

[+] EMBL BM654646             [ACCCACGCGTCCGGCAGCATCAGTTGACAACGCACAGCACACGGCGGGAGTGTGCCAGCACAGTTCGCCTCAAAACCCCTGTACCGCAAGGAGAAGGTCATTTCATCACCATGGTGGTTAAGGGCAGCGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGAGAGGAATTGTTCAGCGGACGGCCGTACGATACAGCCATCACCATCAGGCGCACGATCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTACGGTGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGCACGTTCGATCGGCTGATCCCGCTGCTACCGAAGCACATGAGCTTCCTGGCACTGGACCTTCCCGGCCATGGACTGTCCTCCCGCATCCCGGACGGCATGATGTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCCTGTTCACCTCAACCTTCCCCGATAAGGTCGACTTTTACATTGGCATCG]




>consensus_8895#2
ACCCACGCGTCCGGCAGCATCAGTTGACAACGCACAGCACACGGCGGGAGTGTGCCAGCA
CAGTTCGCCTCAAAACCCCTGTACCGCAAGGAGAAGGTCATTTCATCACCATGGTGGTTA
AGGGCAGCGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACTGTTTTCCCACGAAACGA
GAGGAATTGTTCAGCGGACGGCCGTACGATACAGCCATCACCATCAGGCGCACGATCTGG
TGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTACGGTG
AGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTCACGGCT
GGCAGGATAATGCGGGCACGTTCGATCGGCTGATCCCGCTGCTACCGAAGCACATGAGCT
TCCTGGCACTGGACCTTCCCGGCCATGGACTGTCCTCCCGCATCCCGGACGGCATGATGT
ACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTACCGCTGGAAGA
AGCTCTCGCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCCTGTTCACCTCAACCT
TCCCCGATAAGGTCGACTTTTACATTGGCATCG

consensusID : consensus_8895#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 515
fasta sequence

                              [CAGAATTGCCCGAGGTTAATCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGTACGTTCGATCGGCTGATCCCGCTGCTACCTGAAGCACATGAGCTTTCTGGCGCTGGACCTTCCCGGCCATGGGCTNGTCCTCCCGCATCCCCGGACGGCATGATGTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCCATCATAAGCTTCCTGTTCACCTCAACCTTCCCCGATAAGGTCGACTTTTACATTNGGCATCGATGCGCTTAAACCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTNTGGAACANACACCGCCTACCCAGTCACTGCTGGCGGATGCGACNGA]

[+] EMBL AL697379             [CAGAATTGCCCGAGGTTAATCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTACGGCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGTACGTTCGATCGGCTGATCCCGCTGCTACCTGAAGCACATGAGCTTTCTGGCGCTGGACCTTCCCGGCCATGGGCTNGTCCTCCCGCATCCCCGGACGGCATGATGTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCCATCATAAGCTTCCTGTTCACCTCAACCTTCCCCGATAAGGTCGACTTTTACATTNGGCATCGATGCGCTTAAACCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTNTGGAACANACACCGCCTACCCAGTCACTGCTGGCGGATGCGACNGA]




>consensus_8895#3
CAGAATTGCCCGAGGTTAATCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGG
TGCGCATTCCGGTGCCGTACGGGGAGATTGCCGGCAAGTGGTGGGGCCCACGGGACGTAC
GGCGATCGTGTGCATTCACGGCTGGCAGGATAATGCGGGTACGTTCGATCGGCTGATCCC
GCTGCTACCTGAAGCACATGAGCTTTCTGGCGCTGGACCTTCCCGGCCATGGGCTNGTCC
TCCCGCATCCCCGGACGGCATGATGTACCACACGCTGGACAACACGCTCAGCCTGTTCCA
CGTGATGCGCGAGTACCGCTGGAAGAAGCTCTCGCTAATGGGCCACTCGATGGGTTCCAT
CATAAGCTTCCTGTTCACCTCAACCTTCCCCGATAAGGTCGACTTTTACATTNGGCATCG
ATGCGCTTAAACCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTNTGGAACANACA
CCGCCTACCCAGTCACTGCTGGCGGATGCGACNGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      CCCGAGGTTNTTGGTGCCCCGGAGCGTGTTTTTCCATACACACACACATACCCACTGGAC 60
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      AATGCGGAAGTGTGTGCCGTGATAAGGTGTAGTTCCAGCGCATAAAATTGCCTATTCATC 120
consensus_8895#1      ----------------------------------------------------------TG 2
                                                                                  

consensus_8895#2      -ACCCACGCGTCCGGCAGCATCAGTTGACAACGCACAGCACACGGCGGGAGTGTGCCAGC 59
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      GTGCGTTGATATCAGCAGCATCAGTTGACAACGCGCA-CACACGGCGGAAGTGTGCCAGC 179
consensus_8895#1      CGCTCAACCCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTTGGAAAAACGCCTGC 62
                                                                                  

consensus_8895#2      ACAGTTCGCCTCAAAACCCCTGTACCGCAAGGAGAAGGTCATTTCATCACCATGGTGGTT 119
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      ---------CACAAAACCCCTGTACCGCAAGGAGAAGGTCATTTCATCACCATGGTGGTT 230
consensus_8895#1      CCCAGTTACTGCTGGCGGATGCGAGGAATCGGGAAAAGTC--CGAACCACCGGCCTACCC 120
                                                                                  

consensus_8895#2      AAGGGCAGCGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACT-GTTTTCCCACGAAAC 178
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      AAGGGCAGTGGTGTGATGTTGGTGAAATCCTTGCTCGGGTCACT-GTTTTCCCACGAAAC 289
consensus_8895#1      GTACGAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACCCGTGAGGC 180
                                                                                  

consensus_8895#2      GAGAGGAATTGTTCAGCG--GACGGCCGTACGATACAGC-CATCACCATCAGGCGCACGA 235
consensus_8895#3      ----------------------------------------CAGAATTGCCCGAGGT-TAA 19
consensus_8895#0      GAGAGGAATCGTTCAGCG--GACAGCCGTACGATACAGC-CATCACCACCAGGCGCACGA 346
consensus_8895#1      GGCTCCGTTTCTGCTGTATCGTTACACGCGCAAATCAACGCTCCATCCCGACCGGTACTA 240
                                                              *   *         *    *

consensus_8895#2      TCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTA 295
consensus_8895#3      TCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTA 79
consensus_8895#0      TCTGGTGGAGGAGCACGATCGGCAACATGACGTGGAGGAGGTGCGCATTCCGGTGCCGTA 406
consensus_8895#1      CTTTACGCGGGACAGCCGGCTGAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAA 300
                        *   *  ***   *   * * *  * *   *** *  **   *   ** ** *    *

consensus_8895#2      CGGTGAGATTGCCG-GCAAGTGGTGGGGCCCACGGGACGTACGGCCGATCGTGTGCATTC 354
consensus_8895#3      CGGGGAGATTGCCG-GCAAGTGGTGGGGCCCACGGGACGTACGGC-GATCGTGTGCATTC 137
consensus_8895#0      CGGGGAGATTGCCG-GCAAGTGGTGGGGCCCACGGAACGTACGGCCGATCGTGTGCATTC 465
consensus_8895#1      TTTGGAGCTTGTCAAGCGGGTGGTGCAGCCGT--ACCTGTTCATCAAGGCGAA-ACACTC 357
                          *** *** *  **  ******  ***        ** *  *    **    ** **

consensus_8895#2      ACGGCTGGCAGGATAATGCGGGCACGTTCGATCGGCTGATCCCGCTGCTACC-GAAGCAC 413
consensus_8895#3      ACGGCTGGCAGGATAATGCGGGTACGTTCGATCGGCTGATCCCGCTGCTACCTGAAGCAC 197
consensus_8895#0      ACGGCTGGCAGGATAATGCGGGCACGTTCGATCGGCTGATCCCGCTGCTACC-GAAGCAC 524
consensus_8895#1      GCCGTACTACGAGGAGCGCAAGTAC-TTTGATGAGTTTGTGGAGCTGGTGAA-GCGGAAC 415
                       * *      *   *  **  * ** ** ***  * *  *   **** *    *  * **

consensus_8895#2      ATGAGCTTCCTGGCACTGGACCTTCCCGGCCATGGACTG-TCCTCCCGCATCCC-GGACG 471
consensus_8895#3      ATGAGCTTTCTGGCGCTGGACCTTCCCGGCCATGGGCTNGTCCTCCCGCATCCCCGGACG 257
consensus_8895#0      ATGAGCTTTCTGGCGCTGGACCTTCCCGGCCATGGGCTG-TCCTCCCGCATCCC-GGACG 582
consensus_8895#1      AATCCACAGTTTGAGCTGGAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCG 475
                      *         * *  *****  **   * *      *     ** *  *   **  * **

consensus_8895#2      GCATGAT--GTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTA 529
consensus_8895#3      GCATGAT--GTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTA 315
consensus_8895#0      GCATGAT--GTACCACACGCTGGACAACACGCTCAGCCTGTTCCACGTGATGCGCGAGTA 640
consensus_8895#1      GAAAAGGTGGTGCCGATTGTGGGACGGT-TTCTCGGCAAGT---ACTGGAAGGAGGAGAG 531
                      * *      ** **    *  ****      *** **  **   **  ** *   ***  

consensus_8895#2      CCGCTGGAAGAAGCTCTC--GCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCCTG 587
consensus_8895#3      CCGCTGGAAGAAGCTCTC--GCTAATGGGCCACTCGATGGGTTCCATCATAAGCTTCCTG 373
consensus_8895#0      CCGCTGGAAGAAGCTCTC--GCTAATGGGCCACTCGATGGGTTCGATCATAAGCTTCCTG 698
consensus_8895#1      AGGATGAAATGGGTTGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAG 591
                        * ** **   * *     *  ** * *      *  *****   * **    **   *

consensus_8895#2      TTCACCTCAACCTTCC--CCGATAAGGTCGACTTT--TACATTGG-CATCG--------- 633
consensus_8895#3      TTCACCTCAACCTTCC--CCGATAAGGTCGACTTT--TACATTNGGCATCGATGCGCTTA 429
consensus_8895#0      TTCACCTCAACCTTCC--CCGATAAGGTCGACTTT--TACATTGG-CATCGATGCGCTCA 753
consensus_8895#1      AGTAACAAAAATAAAGGATTGAAAGAATTAACTTTACTACCTCGAAAAAAAAAAAAAA-- 649
                         * *  **          ** *   *  *****  *** *     *            

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      AACCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTNTGGAACANACACCGCCTACC 489
consensus_8895#0      AACCTCACATTGCCGATGCGGCCAAATTCCCGGGTCGGTTGGAAAAACGC----CTGCCC 809
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      CAGTCACTGCTGGCGGATGCGACNGA---------------------------------- 515
consensus_8895#0      CAGTCACTGCTGGCGGATGCGAGGAATCGGGAAAAGTCCGAACCACCGGCCTACCCGTAC 869
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      GAGGAGCTAATAGAACGGCTGCATCTTGGCACGAACAAATCGGTCACGCGTGAGGCAGCT 929
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      CCTTTTCTGCTGTATCGTAACACGCGCAAATCAACGCTCCATCCCGACCGGTACTACTTT 989
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      ACGCGGGACAGCCGGCTAAAGTACGGGCTGGGGATGGGCTGGGATCAGGCGATCAATTTG 1049
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      GAGCTGCCAAGCGGGTGGTGCAGCCGTACCTGTTCATCAAGGCGAAACACTCGCCGTACT 1109
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      ACGAGGAGCGCAAGTACTTTGATGAGTTTGTGGAGCTGGTGAAGCGGAACAATCCACAGT 1169
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      TTGAGCTGTAGTTTGTGGACAGCACGCATCATCTGCATCTGACCGAGCCGGGAAAGGTGG 1229
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      TGCCGATTGTGGGACGGTTTCTCGGCCAGTACTGGAAGGGAGAGAGAGGATGAAATGGGT 1289
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      TGAGAGGTGAACGCGGGCAATGCGGGGTTAATTTATTGATTTAGAGAGTAACAAAAATAA 1349
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------------------------------------
consensus_8895#3      ------------------------------------------------------------
consensus_8895#0      GGGATTGAAAGAATTAACTTTACTACCTCGACGGGATGTTTTACCTGGATAGACGTTTCA 1409
consensus_8895#1      ------------------------------------------------------------
                                                                                  

consensus_8895#2      ------------------------------
consensus_8895#3      ------------------------------
consensus_8895#0      TAATTGCAATAAATGCGAAAATTAATTGAG 1439
consensus_8895#1      ------------------------------