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Anopheles gambiae
cluster # 8900 cluster # 8900       Sequences # 12       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8900#0 length = 1296 sequences # 10  
consensus_8900#1 length = 611 sequences # 1  
consensus_8900#2 length = 300 sequences # 1  

consensusID : consensus_8900#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1296
fasta sequence
                              [CCGCCCACGCGTCCG-CCGA-GTGT---CGACGGTAGTGTTTGCCATCCATT-CCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT----GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC-TAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAA---CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT-GTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACCCGTAGTAGTACGGCCATTATTATTAGCAGCAATATCATCGACGGTTGTGGAGCGATTGTAGCGTGGTGTTAGTGTACCGGTCATACAACCGAATAAAAAAGGGACATCATCGTGCAGCTTCATCCGGAACCTGCTGGTACCCATCATACAAAGGCGTAATTGAGTGTGTGTGTGCGTGATTCGTTTCGAGTGAGATCAGCAGTGTGGGCCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCCGCCAAAAGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGGTTGTTCTAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGGGGTTCGGCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATCTCACAAACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGTTGGCAATATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGATTGCCTGGCCTGGGTGATTGTGACCGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGT]

[+] EMBL BM602930             [CCGCCCACGCGTCCG             CGACGGTAGTGTTTGCCATCCATTCCCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGTGTCCGTGTTGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGCTTAGACAAAACAATAGCGATCGAGCGAGCCCGCGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM636316             [CCGCCCACGCGTCCG        GT   CGACGGTAGTGTTTGCCATCCATT CCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAA   CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM589007             [CCGCCCACGCGTCCG CCCACGCGTCCGCGACGGTAGTGTTTGCCATCCATT CCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAA   CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGTGGTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGTGAAAGCAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BM626553             [     CACGCGTCCG CCGA GTGT   CGACGGTAGTGTTTGCCATCCATT CCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAA   CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGTGAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM614867             [            CCG CCGA GTGT   CGACGGTAGTGTTTGCCATCCATT CCCC   CCCTAGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCG  CGCGCGCGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCCGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCTCGCTGGACACAGTCACAGTCACGGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAACGGCAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGGAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM581563             [            CCG  CGA GTGT   CGACGGTAGTGTTTGCCATCCATTCCCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GT CCGT G TT GTA  GC TT  CGTACCGCGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTAGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCGCGCGC    GTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCCGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTTACGCTGGACACAGTCACAGTCACGGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTCACCAGTAGCAGCAgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM590633             [            CCGCCCGA GTGT   CGACGGTAGTGTTTGCCATCCATTCCCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GT CCGT G TT GTA  GC TT  CGTACCGCGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTAGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCGCGCGC    GTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCCGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTTACGCTGGACACAGTCACAGTCACGGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTCACCAGTAGCAGCAG   CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGGAGCGTTTGATTGTTGAGCACGAATCAACGGACGACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGTCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACCCGTAGTAGTACGGCCATTATTATTAGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM606424             [                      ccg   CGACGGTAGTGTTTGCCATCCATT CCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAA   CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM639058             [                                                         CCGCCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGT    GTGTCGTAGCTTCGTACCGCGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGC TAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGCAA   CAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACCCGTAGTAGCACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM651839             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ccgATCATCGTCGTCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACCCGTAGTAGTACGGCCATTATTATTAGCAGCAATATCATCGACGGTTGTGGAGCGATTGTAGCGTGGTGTTAGTGTACCGGTCATACAACCGAATAAAAAAGGGACATCATCGTGCAGCTTCATCCGGAACCTGCTGGTACCCATCATACAAAGGCGTAATTGAGTGTGTGTGTGCGTGATTCGTTTCGAGTGAGATCAGCAGTGTGGGCCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCCGCCAAAAGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGGTTGTTCTAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGGGGTTCGGCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATCTCACAAACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGTTGGCAATATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGATTGCCTGGCCTGGGTGATTGTGACCGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGT]


>consensus_8900#0 CCGCCCACGCGTCCGCCGAGTGTCGACGGTAGTGTTTGCCATCCATTCCCCCCACCCGCG ACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGTGTGTCGTAGCTTCGTACCGCGTTC GCGTTACACGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACT AGCTGGCGTTAGGAGCGCTAGACAAAACAATAGCGATCGAGCGAGCCCGCACGCGCGTGT GTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTTAGCCGGCCTTTGCTCTG GCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCAGTGTTGCGTAGTGTTGA GCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTGTAATCTGCCGTGCGATC CTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTCACGTTACCAGTAGCAGC AACAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATGCCTACTACTGTGCTAGT GTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGGCACCCACGGCACACATA CAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATCGTCGCCCAAGCATCAGT GTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACCCGTAGTAGTACGGCCATTATTATTA GCAGCAATATCATCGACGGTTGTGGAGCGATTGTAGCGTGGTGTTAGTGTACCGGTCATA CAACCGAATAAAAAAGGGACATCATCGTGCAGCTTCATCCGGAACCTGCTGGTACCCATC ATACAAAGGCGTAATTGAGTGTGTGTGTGCGTGATTCGTTTCGAGTGAGATCAGCAGTGT GGGCCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCCGCCAAAAGAAACAACAAAAAAGC AAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGGTTGTTCTAGGCACGACGGCTCCG CCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGGGGTTCGGCGAAAAGGTGAACCTT TCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATCTCACAAACTCAAACATTACATAA CACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGTTGGCAATATACAAAAAAAAAGGT TTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGATTGCCTGGCCTGGGTGATTGTGAC CGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGT



consensusID : consensus_8900#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 611
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCCGCCAAAAGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGGTTGTTCTAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGGGGTTCGGCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATCTCACAAACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGTTGGCAATATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGATTGCCTGGCCTGGGTGATTGTGACCGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGTCTATGCTAGCGAAACAGGCGGCATAGCGAGAAGCGAACAGAGCGTGTGCTTGAGCGAGAGAGCGAGAGAGCGAGAGACAGAGAGTCCAACCCGCACGAACCAGCAAGAACGAGAGAGAGAGAGAGGCAGAGAGTGAGAAAGAGAGGGAGACAAAAGAGCGATCAAGAAAGCGAAAGAGCGAGATAGTTTCGA]

[+] EMBL BM616168             [CCGCCCACGCGTCCGCCCACGCGTCCGCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCCGCCAAAAGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGGTTGTTCTAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGGGGTTCGGCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATCTCACAAACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGTTGGCAATATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGATTGCCTGGCCTGGGTGATTGTGACCGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGTCTATGCTAGCGAAACAGGCGGCATAGCGAGAAGCGAACAGAGCGTGTGCTTGAGCGAGAGAGCGAGAGAGCGAGAGACAGAGAGTCCAACCCGCACGAACCAGCAAGAACGAGAGAGAGAGAGAGGCAGAGAGTGAGAAAGAGAGGGAGACAAAAGAGCGATCAAGAAAGCGAAAGAGCGAGATAGTTTCGA]


>consensus_8900#1 CCGCCCACGCGTCCGCCCACGCGTCCGCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCC GCCAAAAGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGG TTGTTCTAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGG GGTTCGGCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATC TCACAAACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGT TGGCAATATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGAT TGCCTGGCCTGGGTGATTGTGACCGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGTC TATGCTAGCGAAACAGGCGGCATAGCGAGAAGCGAACAGAGCGTGTGCTTGAGCGAGAGA GCGAGAGAGCGAGAGACAGAGAGTCCAACCCGCACGAACCAGCAAGAACGAGAGAGAGAG AGAGGCAGAGAGTGAGAAAGAGAGGGAGACAAAAGAGCGATCAAGAAAGCGAAAGAGCGA GATAGTTTCGA



consensusID : consensus_8900#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 300
fasta sequence
                              [GTGTTTGCCATCCATTCCCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGTGTCCGTGTTGTAGCTTCGTACCGCGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGCTAGACAAAACAATAGCGATCGAGCGAGCCCGCGCGCGCGTGTATGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAACAGAAGAAAAAGCAAAAAAAACAAACGGATGCGTACGGTATTTGCAGAATAGCTGCCACAAA]

[+] EMBL BX617611             [GTGTTTGCCATCCATTCCCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGTGTGTGTGTCCGTGTTGTAGCTTCGTACCGCGTTACACGATATTCAGGAGGCAACGAGAGCAAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGCTAGACAAAACAATAGCGATCGAGCGAGCCCGCGCGCGCGTGTATGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAACAGAAGAAAAAGCAAAAAAAACAAACGGATGCGTACGGTATTTGCAGAATAGCTGCCACAAA]


>consensus_8900#2 GTGTTTGCCATCCATTCCCCCCCACCCGCGACGGTGTCAATCGTTTTTCTTCCACCAAGT GTGTGTGTCCGTGTTGTAGCTTCGTACCGCGTTACACGATATTCAGGAGGCAACGAGAGC AAGCAGGGCAGGACCATTACTAGCTGGCGTTAGGAGCGCTAGACAAAACAATAGCGATCG AGCGAGCCCGCGCGCGCGTGTATGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAACA GAAGAAAAAGCAAAAAAAACAAACGGATGCGTACGGTATTTGCAGAATAGCTGCCACAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8900#0      ------------------------------------------------------------
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      CCGCCCACGCGTCCGCCCACGCGTCCGCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCC 60
                                                                                  

consensus_8900#0      ------------------------------------------------------------
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      GCCAAAAGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGG 120
                                                                                  

consensus_8900#0      ------------------------------------------------------------
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      TTGTTCTAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGG 180
                                                                                  

consensus_8900#0      ----------------------------------------------------------CC 2
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      GGTTCGGCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATC 240
                                                                                  

consensus_8900#0      GCCCACGCGTCCGCCGAGTGTCGACGGTAGTGTTTGCCATCCATTCCCCCC-ACCCGCGA 61
consensus_8900#2      -----------------------------GTGTTTGCCATCCATTCCCCCCCACCCGCGA 31
consensus_8900#1      TCACAAACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGT 300
                                                   * *    **   *  *           * * 

consensus_8900#0      CGGTGTCAATCGTT--------TTTCTTCCACCAAGTGTGTGTGTGTCGTAGCTTCGTAC 113
consensus_8900#2      CGGTGTCAATCGTT--------TTTCTTCCACCAAGTGTGTGTGT---------CCGTGT 74
consensus_8900#1      TGGCAATATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGAT 360
                       **    *  *           ***  *     *  * * *****          **   

consensus_8900#0      CG--CGTTCGCGTTACACGTTACACGATATTCAGGAGGCAACG-AGAGCAAG---CAGGG 167
consensus_8900#2      TG--TAGCTTCGTACCGCGTTACACGATATTCAGGAGGCAACG-AGAGCAAG---CAGGG 128
consensus_8900#1      TGCCTGGCCTGGGTGATTGTGAC-CGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGT 419
                       *         *      ** ** ** * * *    **  *** ***  *        * 

consensus_8900#0      CAGGACCATT--ACTAGCTGGCGTTAGGAGCGCTAGACAAAACAATAGC--GATCGAGCG 223
consensus_8900#2      CAGGACCATT--ACTAGCTGGCGTTAGGAGCGCTAGACAAAACAATAGC--GATCGAGCG 184
consensus_8900#1      CTATGCTAGCGAAACAGGCGGCATAGCGAGAAGCGAACAGAGCGTGTGCTTGAGCGAGAG 479
                      *    * *    *  **  *** *   ***      *** * *    **  ** **** *

consensus_8900#0      AGCCCGCACGCGCGTGTGTGTGTGTGTGTCGACGGTGACTTAGCGAAAGCAAAAAGCCTT 283
consensus_8900#2      AGCCCGCGCGCGCGTGTATGTGTGTGT--CGACGGTGACTTAGCGAAAGCAAAAAACAGA 242
consensus_8900#1      AGCGAGAGAGCGAGAGACAGAGAGTCCAACCCGCACGAACCAGCAAGAACGAGAGAGAGA 539
                      ***  *   *** * *   * * **    *      **   *** * * * * *      

consensus_8900#0      AGCCGGCCTTTGCTCTGGCACGACGAGCGATCCTGTTCGATCCGGTGGCTTGCAATCGCA 343
consensus_8900#2      AGAAAA----------AGCAAAAAAAACAAACGGATGCG-TACGGTA-TTTGCAGAATAG 290
consensus_8900#1      GAGAGGCAG-------AGAGTGAGAAAGAGAGGGAGACAAAAGAGCGATCAAGAAAGCGA 592
                                       *    *  *           *      *        *      

consensus_8900#0      GTGTTGCGTAGTGTTGAGCCCTCCCTCTCTCTCACGCTGGACACAGTCACAGTCACAGTG 403
consensus_8900#2      CTGCCACAAA-------------------------------------------------- 300
consensus_8900#1      AAGAGCGAGATAGTTTCGA----------------------------------------- 611
                        *      *                                                  

consensus_8900#0      TAATCTGCCGTGCGATCCTCCGCAGTAGCCATCGACGAGTAGCGGCGCCCCGTTGACGTC 463
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      ACGTTACCAGTAGCAGCAACAGCAGCAGCAGCAGCAGCTTCCACACGTATCATATCGATG 523
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      CCTACTACTGTGCTAGTGTGTGTAGCGTTTGATTGTTGAGCACGAATCAACGGACCACGG 583
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      CACCCACGGCACACATACAGCGCGTTTAATGTCCACCCTTGGTGCAATTCGTCTATCATC 643
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      GTCGCCCAAGCATCAGTGTGAAAGCAGCATCCGCAAGCTGGCGGTAACGACCCGTAGTAG 703
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      TACGGCCATTATTATTAGCAGCAATATCATCGACGGTTGTGGAGCGATTGTAGCGTGGTG 763
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      TTAGTGTACCGGTCATACAACCGAATAAAAAAGGGACATCATCGTGCAGCTTCATCCGGA 823
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      ACCTGCTGGTACCCATCATACAAAGGCGTAATTGAGTGTGTGTGTGCGTGATTCGTTTCG 883
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      AGTGAGATCAGCAGTGTGGGCCAGTGCAGTGCCAGTAGGCCCCCGAACAAATCCGCCAAA 943
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      AGAAACAACAAAAAAGCAAAGGAAACCAGCCCCGCTGCAGTTCCCCCGCCGCGGTTGTTC 1003
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      TAGGCACGACGGCTCCGCCGGCAGCTACGCAGCTACGCAGCGTCCCTATGTTGGGGTTCG 1063
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      GCGAAAAGGTGAACCTTTCCGAGTTAATGTTGCTAAATGTGCTGATAAAACATCTCACAA 1123
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      ACTCAAACATTACATAACACGCGGCGCGCACCGGACGCTGGTGTAAGTGTGTGTTGGCAA 1183
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      TATACAAAAAAAAAGGTTTGATTTTTGAGTTTTTTGTGTGCGCGTGTCGCGGATTGCCTG 1243
consensus_8900#2      ------------------------------------------------------------
consensus_8900#1      ------------------------------------------------------------
                                                                                  

consensus_8900#0      GCCTGGGTGATTGTGACCGCTGTACCAACGGTGACGGAGAATAGAGTTTTCGT 1296
consensus_8900#2      -----------------------------------------------------
consensus_8900#1      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)