Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8905 cluster # 8905       Sequences # 13       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8905#0 length = 1192 sequences # 13  

consensusID : consensus_8905#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1192
fasta sequence
                              [GCCGTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA-ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACG-ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAACA-TTACCGCGTCACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC-TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT---AAT-TATACGAATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAGTAATAAATATTTACCGATACGTATGAACGTAAAGAAAAAAAAAAAAAAAAAA]

[+] EMBL BM597147             [ CCGTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGGGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCTCCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACG ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS09JNT             [ggacTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCACATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCA CAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGT TGGCGCAACGCTTCCAACG ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGACGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGC AACATTTACCGCGTCACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGA                                                                                                                                                                                                  ]
[+] EMBL AGA280469            [       TTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAACCCATGTCACCGTATGATTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AGA280034            [        TTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09GV8             [          TGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCA CAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCATGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGT TGGCGCAACGCTTCCAACG ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAACA TTACCGCGTCACTGCTAACGGGACGTTCTACTATGATGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACCTTTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTCG                                                                                                                                                                              ]
[+] EMBL CNS09BPN             [                        ATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGgc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS09FET             [                                                              A ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGAC GAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCA CAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS09JNU             [                                                                                                                                                            ACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAAT GTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACG ATGCG TACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGACGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAGCA TTACCGCGTAACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCACTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT   AAT TATACGAATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAGTAATAAATATTTACC                                     ]
[-] EMBL CNS09GV9             [                                                                                                                                                                                              CCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGAACTTGAAAAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAAATGTTTCACCGTCCAGTGTGTACGGTGCCCCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCATGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACGAATGC CTACCCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAACA TTACCGCGTCACTGCTAACGGGACGTTCTACTATGATGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTCGGTATACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCGGTGAGAGTGTAGACGAATTACACAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAGTAATAAATATTTACCGATACGTATGAACGTAAAGAAAAAAAAAAAAAAAAAA]
[+] EMBL BX613826             [                                                                                                                                                                                                                                                                                                                                                                                                                  ATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCGCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL AGA281730            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGTAGGTGCGTGGGAGCACGGGCTAGCCAGTCCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAGCA TTACCGCGTCACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCACTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT   AAT TATACGAATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTG                                                         ]
[-] EMBL AGA282173            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCACTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCAT                                                                                                                                   ]
[-] EMBL CNS09FEU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTC GTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT   AAT TAGACGAATTACACAGCTGTA                                                                                                 ]


>consensus_8905#0 GCCGTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTAT GCAATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCA TGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCA AGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGC TGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTAC CCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACG GTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGC GCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAAC CCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCT CTTCCACGCAGTGTGGCGCAACGCTTCCAACGATGCGCTACGCCGCACAGGAGCTGTTTC TGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAG CCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAA ACATTCTTTCCGCCGTGATTATGGCGCGCAAACATTACCGCGTCACTGCTAACGGGACGT TCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAA CCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGC CACCAACGGATTCCACCTTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCA AGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATT CGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATTAATTATACG AATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAG TAATAAATATTTACCGATACGTATGAACGTAAAGAAAAAAAAAAAAAAAAAA



clustalw multiple alignements is not computed in this case


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)