These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8905#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1192 fasta sequence [GCCGTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA-ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACG-ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAACA-TTACCGCGTCACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC-TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT---AAT-TATACGAATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAGTAATAAATATTTACCGATACGTATGAACGTAAAGAAAAAAAAAAAAAAAAAA] [+] EMBL BM597147 [ CCGTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGGGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCTCCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACG ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAG ] [+] EMBL CNS09JNT [ggacTGTTTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCACATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCA CAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGT TGGCGCAACGCTTCCAACG ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGACGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGC AACATTTACCGCGTCACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGA ] [+] EMBL AGA280469 [ TTTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAACCCATGTCACCGTATGATTACA ] [+] EMBL AGA280034 [ TTTGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAAC ] [+] EMBL CNS09GV8 [ TGTTCGTAGAGAAAATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCA CAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCATGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGT TGGCGCAACGCTTCCAACG ATGCGCTACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAACA TTACCGCGTCACTGCTAACGGGACGTTCTACTATGATGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACCTTTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTCG ] [+] EMBL CNS09BPN [ ATTGTGCTTAATATTTCCCCCTGTTTTCAGTGCTATGCA ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGgc ] [+] EMBL CNS09FET [ A ATAAAATGAGCTCTAGCGTCGAAAGCACCGAAGTGGACAGCGCCAAACAAGCGCTCATGTTGGCATTGGGCGACAAGTGGACGATGTACTTGACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAATGGTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGAC GAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCA CAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGAT ] [-] EMBL CNS09JNU [ ACCAACATGAAGCTCTGGTTCCGCAAGAAACACTCCAAAGAGGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGCACTTGCACAACCGCTTCCTGTTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAAT GTTTCACCGTCCAGTGTGTACGGTGCCGCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCAATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCACGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACG ATGCG TACGCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGACGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAGCA TTACCGCGTAACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCACTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT AAT TATACGAATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAGTAATAAATATTTACC ] [-] EMBL CNS09GV9 [ CCAAAGAAGAGTTCGACCTCGAATGCCGCAAACTGTTCAGCCCGAATCAGCTGAACTTGAAAAACCGCTTCCTGCTGGCAATCCTGAACAAAATCGATGCCGTTTCCGTACCCCAATCGTCCGCCAATCATTTCGATGGAGCGCAAAATGTTTCACCGTCCAGTGTGTACGGTGCCCCCGGTGACGGAACGGGCTACAGTTGTCTGTCATCGATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCTCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCGTATGATTACATTCCATGCGAACCCGCTGGTCCAGATCAGGAGCACGGCTCTTCCACGCAGTGTGGCGCAACGCTTCCAACGAATGC CTACCCCGCACAGGAGCTGTTTCTGCCAGATAATGGGCTGGTGCTCGGTCGTCTCCTCGTAGGTGCGTGGGAGCACGGGCTAGCCAGTGCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAACA TTACCGCGTCACTGCTAACGGGACGTTCTACTATGATGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTCGGTATACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCGGTGAGAGTGTAGACGAATTACACAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTGAACAGTAATAAATATTTACCGATACGTATGAACGTAAAGAAAAAAAAAAAAAAAAAA] [+] EMBL BX613826 [ ATGCAGCAGGCGGACGGGCGCAGCAGCAAGAAGCGCAAACGCGCCTCCAAATCGTCATCTGATCGATCGACCTTCGAACCCATGTCACCG ] [-] EMBL AGA281730 [ CGTAGGTGCGTGGGAGCACGGGCTAGCCAGTCCCGATGATGCTGCGGTCGAGCTTATCGTAAGCTCGGTGCAAGTGTTGCTGAAAAACATTCTTTCCGCCGTGATTATGGCGCGCAAGCA TTACCGCGTCACTGCTAACGGGACGTTCTACTATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCACTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT AAT TATACGAATTACGTAGCTGTACAGCTTTGAATTACACATATTTGTTTAATAGTTTGATGTG ] [-] EMBL AGA282173 [ ATGACGTGGGTCGTGGGATGGATCCTATGGATGTGCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCACTCGGTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCAT ] [-] EMBL CNS09FEU [ GCGGAACACAGTCACCAAAACCAAAATCGATGACGAACCGATGGAACTGGACAGGGAAATTCTGTGTTACGTGAAAACGCCACCAACGGATTCCACC TTTTTGGCGAGCTGTGAAAACTTGTATCCTAGTGTCAGCCGCAAGATAAACGCCTTAGAGCTATATAGAGCATTGCAAGATCGGAATTTAATATCCTCGCATTC GTGTACTCGATGAACATAGAGCGCATTTCAAGCCAGCTTTCATAGCATT AAT TAGACGAATTACACAGCTGTA ] clustalw multiple alignements is not computed in this case |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||