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Anopheles gambiae
cluster # 8922 cluster # 8922       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8922#0 length = 3053 sequences # 12  
consensus_8922#1 length = 752 sequences # 1  

consensusID : consensus_8922#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 3053
fasta sequence
                              [CCGAGTAGGCGTTGGCGGTAACAAAGAATGCTTCGATTGCGGCCAGAAAGGGCCAACTTACATCAACATGACTATCGGCTCGTTCGTCTGCACCAGCTGCTCCGGCATATTAAGAGGACTCACTCCGCCACATCGCGTAAAATCGATTTCCATGGCCACTTTCACCCAGGAGGAGATTGAATTTCTCAAACAAAATGGCAACGACAACTGCAGCAGAACTTGGTTGGGCCTTTGGGATCCAAAACGTGCAATTAAGCAGGAACATCGAGACTTTATGATAGACAAGTACGAAAGGAAAAGATATTATCTGGAGCCTGCTAGTCCGTTGAAATCGCTGCCCACGAATGCATCGAGCTCGCTGACGTCACTGTCGGGAGGCAGCAATAAGAATGCCAATGAAAGTTTAGTTCCACTCAAAACGCCAACGCTAACGCCTCCGGCAACGTTACGATTAAATCGTACCAACTCTGGCTCGTGTAATGGACTGAACAACGTAAACGCATCATCATCATCGTTGCCTGGTGCAATCGGTGGCGGTACGCAGTTTCAGCAGCAATTCACGCCAGACGACAGTGGGTTTTTCAGCGCGGATCCACCGAAAATTTTGCCACCGACACCGCAAAAGAGTCACATTCTTCAGCGAAAGAATGGCATTAAGATGAAACAACACCCGGCGAACGGACTGCCGGCAACGTACGGGCGTAACCAGAAGAATGGTTTGCTGAACAACAGCAGCGCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAAGTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGTCAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTGAAAAACAGTAATGCCGTTAGCGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACGAGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCA------GGTCTTCCGATGATGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGCGTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCAGTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAACGGAACAGCAACCACCATAAGCGATTCCATCACGCCAAGTATGTGTTTGCGTATGGACTGCTGCGTAAGAGATGAAACTAATTCTTTCTCTAATCTGTTCAGCTTCCTCGGCTAACCCGTTCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGATGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACG-CCGGATGCACGGCATCCGGTAACGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTGCCAGCCCACAGCTTTACAACGGCAATGTTGGGAATGGTGGTAGCACTATGGGAGCTACGATGGGGTATCTTCCTGCGATGGGCTACCCTCCCAATCATGGCAACAATGGTTATCCTGGAGCGCAGGGAATGAACGGAGTTATGATGGGAGGACAGTTCAATGTAACGGCGAACGGCGGTGGTGCTTCGATATTGGGCAACGTTGCAGGTGTCGGTAATCCGGTGCATCATTTTGCAAACTTTGGAAACCCTTTCATGGCTGCCGGTACTACAGCGGGAAACTCAAATAATCCTTTCTTATGAGTAGCTTCATAAGCCGTATGTATAGCTAGTAAATTATACATTTTACAAGAAAATGTTTGGATGTGTGTTTTAGCATACGCTTCATTGTTTTTACATAGAAAGAGTTTATTCTGTTTCGCTCTGTGCTGAACGGAGCGCAGCAAGAAGATGCATACAAATATTCAACACAATAGGAAAATGAAGCGATAAACTGTGACGCAAGGAGCGCACAATATGTGTGCAACACATATACGTGAATCGTTCAAGGGATGTACATAAGTTTTAATTTAAACTAATTAAAAGTAAAAAAGAAAGCGATAACTGATACATTCAAAGGAGTAAACATTATCGAAAGCGTGTAACATTAGCTTTATGTTGCTAAGCTCTGTATTCATTTTATTCAACCCATGACATGTTGGTTTGGGTCCCCCGCTACTGTTCGATAAAAGTATTGGAAAACAGGTTACAGCATGGCGGTTCATCCGTGAATTGGCGGGACACGCACGTGTTTCACAACCATACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAATGTAGGAAAACAAAAGTAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTTCTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTATGCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAATTCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGGAAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAGCAATTTTCGGTTAATTTTTAAACAAAAATTAGTACACGAATATGCACCAACAAAACGAGAATGGGATAGAGCGTTGTAGTGATGGTCATCATTACTAATACTACTATTACTATTGTTACTACTAACGTCACTACTATTACTAAACTCTTTCGAAAATATGGAACATTTTACGGCAACCGTCGTTTGGCGGGCGTGTAATGTATGTGTATGTAGATGAACAGTTTGATGAACAAAGCTCTAACACTAACGATCAAATCGAACAAAAACTCCGCTGTATGTTGGATTTACCAATCGATAATAAAACGAATCCTCCATGACAAACTCGTTACACTTCGAAACAGTTCCGAAACCAAACCGAACCTACAAACAAACCTACTCAATGTACCGATCGAAACGTAAAACGAAATGTATCTTACTGATGGTTGTAAAAAAAA]

[+] EMBL BM608088             [CCGAGTAGGCGTTGGCGGTAACAAAGAATGCTTCGATTGCGGCCAGAAAGGGCCAACTTACATCAACATGACTATCGGCTCGTTCGTCTGCACCAGCTGCTCCGGCATATTAAGAGGACTCACTCCGCCACATCGCGTAAAATCGATTTCCATGGCCACTTTCACCCAGGAGGAGATTGAATTTCTCAAACAAAATGGCAACGACAACTGCAGCAGAACTTGGTTGGGCCTTTGGGATCCAAAACGTGCAATTAAGCAGGAACATCGAGACTTTATGATAGACAAGTACGAAAGGAAAAGATATTATCTGGAGCCTGCTAGTCCGTTGAAATCGCTGCCCACGAATGCATCGAGCTCGCTGACGTCACTGTCGGGAGGCAGCAATAAGAATGCCAATGAAAGTTTAGTTCCACTCAAAACGCCAACGCTAACGCCTCCGGCAACGTTACGATTAAATCGTACCAACTCTGGCTCGTGTAATGGACTGAACAACGTAAACGCATCATCATCATCGTTGCCTGGTGCAATCGGTGGCGGTACGCAGTTTCAGCAGCAATTCACGCCAGACGACAGTGGGTTTTTCAGCGCGGATCCACCGAAAATTTTGCCACCGACACCGCAAAAGAGTCACATTCTTCAGCGAAAGAATGGCATTAAGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX625478             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       GCAACGTTACGATTAAATCGTACCAACTCTGGCTCGTGTAATGGACTGAACAACGTAAACGCATCATCATCATCGTTGCCTGGTGCAATCGGTGGCGGTACGCAGTTTCAGCAGCAATTCACGCCAGACGACAGTGGGTTTTTCAGCGCGGATCCACCGAAAATTTTGCCACCGACACCGCAAAAGAGTCACATTCTTCAGCGAAAGAATGGCATTAAGATGAAACAACACCCGGCGAACGGACTGCCGGCAACGTACGGGCGTAACCAGAAGAATGGTTTGCTGAACAACAGCAGCGCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAAGTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGTCAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTGAAAAACAGTAATGCCGTTAGCGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACGAGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTAATGGTCTTCCGATGATGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM578777             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ccgAATGGACTGAACAACGTAAACGCATCATCATCATCGTTGCCTGGTGCAATCGGTGGCGGTACGCAGTTTCAGCAGCAATTCACGCCAGACGACAGTGGGTTTTTCAGCGCGGATCCACCGAAAATTTTGCCACCGACACCGCAAAAGAGTCACATTCTTCAGCGAAAGAATGGCATTAAGATGAAACAACACCCGGCGAACGGACTGCCGGCAACGTACGGGCGTAACCAGAAGAATGGTTTGCTGAACAACAGCAGCGCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAAGTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGTCAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTGAAAAACAGTAATGCCGTTAGCGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACGAGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BM645878             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACTAGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCA      GGTCTTCCGATGCTGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGCGTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCAGTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAACGGAACAGCAACCACCATAAGCGATTCCATCACGCCAAGTATGTGTTTGCGTATGGACTGCTGCGTAAGAGATGAAACTAATTCTTTCTCTAATCTGTTCAGCTTCCTCGGCTAACCCGTTCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGATGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACGCCCGGATGCACGGCATCCGGTAACGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTGCCAGCCCACAGCTTTACAACGGCAATGTTGGGAATGGTGGTAGCACTATGGGAGCTACGATGGGGTATCTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM608009             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ccgCGTTCCAACCGCAACAGCAGCAACCGCATGCACAACAGCAAACGATGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACG CCGGATGCACGGCATCCGGTAACGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTGCCAGCCCACAGCTTTACAACGGCAATGTTGTGAATGGTGGTAGCACTATGGGAGCTACGATGGGTTATCTTCCTGCGATGGGCTACCCTCCCAATCATGGCAACAATGGTTATCCTGGAGCGCAGGGAATGAACGGAGTTATGATGGGAGGACAGTTCAATGTAACGGCGAACGGCGGTGGTGCTTCGATATTGGGCAACGTTGCAGGTGTCGGTAATCCGGTGCATCATTTTGCAAACTTTGGAAACCCTTTCATGGCTGCCGGTACTACAGCGGGAAACTCAAATAATCCTTTCTTATGAGTAGCTTCATAAGCCGTATGTATAGCTAGTAAATTATACATTTTACAAGAAAATGTTTGGATGTGTGTTTTAGCATACGCTTCATTGTTTTTACATAGAAAGAGTTTATTCTGTTTCGCTCTGTGCTGAACGGAGCGCAGCAAGAAGATGCATACAAATATTCAACACAATAGGAAAATGAAGCGATAAACTGTGACGCAAGGAGCGCACAATATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM575611             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ccgAGAAGATGCATACAAATATTCAACACAATAGGAAAATGAAGCGATAAACTGTGACGCAAGGAGCGCACAATATGTGTGCAACACATATACGTGAATCGTTCAAGGGATGTACATAAGTTTTAATTTAAACTAATTAAAAGTAAAAAAGAAAGCGATAACTGATACATTCAAAGGAGTAAACATTATCGAAAGCGTGTAACATTAGCTTTATGTTGCTAAGCTCTGTATTCATTTTATTCAACCCATGACATGTTGGTTTGGGTCCCCCGCTACTGTTCGATAAAAGTATTGGAAAACAGGTTACAGCATGGCGGTTCATCCGTGAATTGGCGGGACACGCACGTGTTTCACAACCATACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAATGTAGGAAAACAAAAGTAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTTCTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTATGCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAATTCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGGAAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX628844             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGCATACAAATATTCAACACAATAGGAAAATGAAGCGATAAACTGTGACGCAAGGAGCGCACAATATGTGTGCAACACATATACGTGAATCGTTCAAGGGATGTACATAAGTTTTAATTTAAACTAATTAAAAGTAAAAAAGAAAGCGATAACTGATACATTCAAAGGAGTAAACATTATCGAAAGCGTGTAACATTAGCTTTATGTTGCTAAGCTCTGTATTCATTTTATTCAACCCATGACATGTTGGTTTGGGTCCCCCGCTACTGTTCGATAAAAGTATTGGAAAACAGGTTACAGCATGGCGGTTCATCCGTGAATTGGCGGGACACGCACGTGTTTCACAACCACACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAATGTAGGAAAACAAAAGTAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTTCTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTATGCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAATTCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGGAAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAGCAATTTTCGGTTAATTTTTAAACAAAAATTAGTACACGAATATGCACCAACAAAACGAGAATGGGATAGAGCGTTGTAGTGATGGTCATCATTACTAATACTACTATTACTATTGGTACTACTAACGTCACTA                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AGA282763            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATTGGAAAACAGGTTACAGCATGGCGGTTCATCCGTGAATTGGCGGGACACGCACGTGTTTCACAACCATACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAATGTAGGAAAACAAAAGTAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTTCTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTATGCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAATTCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGGAAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAGCAATTTTCGGTTAATTTTTAAACAAAAAATAGTACACGAATATGCACCA                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM600276             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ccgGGGACACGCACGTGTTTCACAACCAAACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAATGTAGGAAAACAAAAATAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTTCTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTATGCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAATTCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGGAAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAGCAATTTTCGGTTAATTTTTAAACAAAAATTAGTACACGAATATGCACCAACAAAACGAGAATGGGATAGAGCGTTGTAGTGATGGTCATCATTACTAATACTACTATTACTATTGTTACTACTAACGTCACTACTATTACTAAACTCTTTCGAAAATATGGAACATTTTACGGCAACCGTCGTTTGGCGGGCGTGTAATGTATGTGTATGTAGATGAACAGTTTGATGAACAAAGCTCTAACACTAACGATCAAATCGAACAAAAACTCCGCTGTATGTTGGATTTACCAATCGATAATAAAACGAA                                                                                                                               ]
[+] EMBL BX627171             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TTGCTATGCATAGCNAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTNAAAATTGGAAATCCATGCGGATGATTAANACACACAGCTGGGTTTATCCAATTANTTAATCACTGNTTCGGGAAAGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL AGA281136            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCGGTTAATTTTTAAACAAAAATTAGTACACGAATATGCACCAACAAAACGAGAATGGGATAGAGCGTTGTAGTGATGGTCATCATTACTAATACTACTATTACTATTGTTACTACTAACGTCACTACTATTACTAAACTCTTTCGAAAATATGGAACATTTTACGGCAACCGTCGTTTGGCGGGCGTGTAATGTATGTGTATGTAGATGAACAGTTTGATGAACAAAGCTCTAACACTAACGATCAAATCGAACAAAAACTCCGCTGTATGTTGGATTTACCAATCGATAATAAAACGAATCCTCCATGACAAACTCGTTACACTTCGAAACAGTTCCGAAACCAAACCGAACCTACAAACAAACCTACTCAATGTACCGATCGAAACGTAAAACGAAATGTATCTTACTGATGGTTGTAAAAAAAA]
[+] EMBL BX627549             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TAATTTTTANACNAAAATTAGTACACGAATATGCACCAACGANACGAGAATGGGATANAGCGTTGTAGNGATGGTCATCATTACTAATACTACTATTACTATTGTTACTACTAACGTCNCTACTATTACTAAACTCTTTCGAAAATATGGAACATTTTACNGCAACCGTCGTNTGGCGGG                                                                                                                                                                                                                                                   ]


>consensus_8922#0 CCGAGTAGGCGTTGGCGGTAACAAAGAATGCTTCGATTGCGGCCAGAAAGGGCCAACTTA CATCAACATGACTATCGGCTCGTTCGTCTGCACCAGCTGCTCCGGCATATTAAGAGGACT CACTCCGCCACATCGCGTAAAATCGATTTCCATGGCCACTTTCACCCAGGAGGAGATTGA ATTTCTCAAACAAAATGGCAACGACAACTGCAGCAGAACTTGGTTGGGCCTTTGGGATCC AAAACGTGCAATTAAGCAGGAACATCGAGACTTTATGATAGACAAGTACGAAAGGAAAAG ATATTATCTGGAGCCTGCTAGTCCGTTGAAATCGCTGCCCACGAATGCATCGAGCTCGCT GACGTCACTGTCGGGAGGCAGCAATAAGAATGCCAATGAAAGTTTAGTTCCACTCAAAAC GCCAACGCTAACGCCTCCGGCAACGTTACGATTAAATCGTACCAACTCTGGCTCGTGTAA TGGACTGAACAACGTAAACGCATCATCATCATCGTTGCCTGGTGCAATCGGTGGCGGTAC GCAGTTTCAGCAGCAATTCACGCCAGACGACAGTGGGTTTTTCAGCGCGGATCCACCGAA AATTTTGCCACCGACACCGCAAAAGAGTCACATTCTTCAGCGAAAGAATGGCATTAAGAT GAAACAACACCCGGCGAACGGACTGCCGGCAACGTACGGGCGTAACCAGAAGAATGGTTT GCTGAACAACAGCAGCGCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAA GTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGT CAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTGAAAAACAGTAATGCCGTTAG CGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACG AGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTCTTCC GATGATGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGC GTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCA GTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAA CGGAACAGCAACCACCATAAGCGATTCCATCACGCCAAGTATGTGTTTGCGTATGGACTG CTGCGTAAGAGATGAAACTAATTCTTTCTCTAATCTGTTCAGCTTCCTCGGCTAACCCGT TCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGA TGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACGCCGGATGCACGGCATCCGGTAA CGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTG CCAGCCCACAGCTTTACAACGGCAATGTTGGGAATGGTGGTAGCACTATGGGAGCTACGA TGGGGTATCTTCCTGCGATGGGCTACCCTCCCAATCATGGCAACAATGGTTATCCTGGAG CGCAGGGAATGAACGGAGTTATGATGGGAGGACAGTTCAATGTAACGGCGAACGGCGGTG GTGCTTCGATATTGGGCAACGTTGCAGGTGTCGGTAATCCGGTGCATCATTTTGCAAACT TTGGAAACCCTTTCATGGCTGCCGGTACTACAGCGGGAAACTCAAATAATCCTTTCTTAT GAGTAGCTTCATAAGCCGTATGTATAGCTAGTAAATTATACATTTTACAAGAAAATGTTT GGATGTGTGTTTTAGCATACGCTTCATTGTTTTTACATAGAAAGAGTTTATTCTGTTTCG CTCTGTGCTGAACGGAGCGCAGCAAGAAGATGCATACAAATATTCAACACAATAGGAAAA TGAAGCGATAAACTGTGACGCAAGGAGCGCACAATATGTGTGCAACACATATACGTGAAT CGTTCAAGGGATGTACATAAGTTTTAATTTAAACTAATTAAAAGTAAAAAAGAAAGCGAT AACTGATACATTCAAAGGAGTAAACATTATCGAAAGCGTGTAACATTAGCTTTATGTTGC TAAGCTCTGTATTCATTTTATTCAACCCATGACATGTTGGTTTGGGTCCCCCGCTACTGT TCGATAAAAGTATTGGAAAACAGGTTACAGCATGGCGGTTCATCCGTGAATTGGCGGGAC ACGCACGTGTTTCACAACCATACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAAT GTAGGAAAACAAAAGTAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTT CTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTAT GCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAAT TCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGG AAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAGCAATTTTCGGTTAATTTTTAA ACAAAAATTAGTACACGAATATGCACCAACAAAACGAGAATGGGATAGAGCGTTGTAGTG ATGGTCATCATTACTAATACTACTATTACTATTGTTACTACTAACGTCACTACTATTACT AAACTCTTTCGAAAATATGGAACATTTTACGGCAACCGTCGTTTGGCGGGCGTGTAATGT ATGTGTATGTAGATGAACAGTTTGATGAACAAAGCTCTAACACTAACGATCAAATCGAAC AAAAACTCCGCTGTATGTTGGATTTACCAATCGATAATAAAACGAATCCTCCATGACAAA CTCGTTACACTTCGAAACAGTTCCGAAACCAAACCGAACCTACAAACAAACCTACTCAAT GTACCGATCGAAACGTAAAACGAAATGTATCTTACTGATGGTTGTAAAAAAAA



consensusID : consensus_8922#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 752
fasta sequence
                              [GCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAAGTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGTCAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTAAAAAACAGTAATGCCGTTAGCGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACGAGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTCTTCCGATGCTGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGCGTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCAGTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAACGGAACAGCAACCACCATAAGCGATTCCATCACGCCAACTTCCTCGGCTAACCCGTTCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGATGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACGCCGGATGCACGGCATCCGGTAACGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTGNCAGCCCACAGCTTTACAACGGCAATGNTGTGAATGGNGGTAGCACTATGGG]

[+] EMBL BX627542             [GCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAAGTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGTCAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTAAAAAACAGTAATGCCGTTAGCGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACGAGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTCTTCCGATGCTGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGCGTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCAGTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAACGGAACAGCAACCACCATAAGCGATTCCATCACGCCAACTTCCTCGGCTAACCCGTTCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGATGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACGCCGGATGCACGGCATCCGGTAACGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTGNCAGCCCACAGCTTTACAACGGCAATGNTGTGAATGGNGGTAGCACTATGGG]


>consensus_8922#1 GCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAAGTTTACACCTGATGCC GACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGTCAGCAACGGAGGCAGT CATTATGGAAGTACTAGTAGTTTAAAAAACAGTAATGCCGTTAGCGACAACGGGACCGGA TTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACGAGAGATGGAAAATTTT GCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTCTTCCGATGCTGCATGGTACG AACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGCGTCCATTAATTCAACA CCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCAGTTCCGGGAGATAAAA TTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAACGGAACAGCAACCACC ATAAGCGATTCCATCACGCCAACTTCCTCGGCTAACCCGTTCAAAACGGCCAATCCGTTC CAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGATGGCTTGGCCTATCAGTGGT GCCATCAACGGTACGACGCCGGATGCACGGCATCCGGTAACGAACGGCGGGACTGGATTC TATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTGNCAGCCCACAGCTTTACAAC GGCAATGNTGTGAATGGNGGTAGCACTATGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8922#0      CCGAGTAGGCGTTGGCGGTAACAAAGAATGCTTCGATTGCGGCCAGAAAGGGCCAACTTA 60
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CATCAACATGACTATCGGCTCGTTCGTCTGCACCAGCTGCTCCGGCATATTAAGAGGACT 120
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CACTCCGCCACATCGCGTAAAATCGATTTCCATGGCCACTTTCACCCAGGAGGAGATTGA 180
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      ATTTCTCAAACAAAATGGCAACGACAACTGCAGCAGAACTTGGTTGGGCCTTTGGGATCC 240
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      AAAACGTGCAATTAAGCAGGAACATCGAGACTTTATGATAGACAAGTACGAAAGGAAAAG 300
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      ATATTATCTGGAGCCTGCTAGTCCGTTGAAATCGCTGCCCACGAATGCATCGAGCTCGCT 360
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GACGTCACTGTCGGGAGGCAGCAATAAGAATGCCAATGAAAGTTTAGTTCCACTCAAAAC 420
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GCCAACGCTAACGCCTCCGGCAACGTTACGATTAAATCGTACCAACTCTGGCTCGTGTAA 480
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      TGGACTGAACAACGTAAACGCATCATCATCATCGTTGCCTGGTGCAATCGGTGGCGGTAC 540
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GCAGTTTCAGCAGCAATTCACGCCAGACGACAGTGGGTTTTTCAGCGCGGATCCACCGAA 600
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      AATTTTGCCACCGACACCGCAAAAGAGTCACATTCTTCAGCGAAAGAATGGCATTAAGAT 660
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GAAACAACACCCGGCGAACGGACTGCCGGCAACGTACGGGCGTAACCAGAAGAATGGTTT 720
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GCTGAACAACAGCAGCGCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAA 780
consensus_8922#1      ----------------GCCACCGGGCTGTCGGGAAGTAGCGGTGACATTAACGCCAATAA 44
                                      ********************************************

consensus_8922#0      GTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGT 840
consensus_8922#1      GTTTACACCTGATGCCGACTTTGTGGCTGACTTTGGCAGCGCTACAATAGTGAATAACGT 104
                      ************************************************************

consensus_8922#0      CAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTGAAAAACAGTAATGCCGTTAG 900
consensus_8922#1      CAGCAACGGAGGCAGTCATTATGGAAGTACTAGTAGTTTAAAAAACAGTAATGCCGTTAG 164
                      *************************************** ********************

consensus_8922#0      CGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACG 960
consensus_8922#1      CGACAACGGGACCGGATTGTATGCGCAGCACAATGGCAACAACGGGGAGGTATCGGCACG 224
                      ************************************************************

consensus_8922#0      AGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTCTTCC 1020
consensus_8922#1      AGAGATGGAAAATTTTGCCGACTTCGATCACAATCCCATCTTTAACTCAGCAGGTCTTCC 284
                      ************************************************************

consensus_8922#0      GATGATGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGC 1080
consensus_8922#1      GATGCTGCATGGTACGAACAATGGGGATAGCAAAACATCCAATGGCAAACCTAGTAACGC 344
                      **** *******************************************************

consensus_8922#0      GTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCA 1140
consensus_8922#1      GTCCATTAATTCAACACCGTCCGTGGATCGATACGCCGCACTGAAAGACTTGGATGAGCA 404
                      ************************************************************

consensus_8922#0      GTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAA 1200
consensus_8922#1      GTTCCGGGAGATAAAATTAGAGCAACAGGCTGAGGCGAATAATAACACAATAACGTCAAA 464
                      ************************************************************

consensus_8922#0      CGGAACAGCAACCACCATAAGCGATTCCATCACGCCAAGTATGTGTTTGCGTATGGACTG 1260
consensus_8922#1      CGGAACAGCAACCACCATAAGCGATTCCATCACGCCAA---------------------- 502
                      **************************************                      

consensus_8922#0      CTGCGTAAGAGATGAAACTAATTCTTTCTCTAATCTGTTCAGCTTCCTCGGCTAACCCGT 1320
consensus_8922#1      ------------------------------------------CTTCCTCGGCTAACCCGT 520
                                                                ******************

consensus_8922#0      TCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGA 1380
consensus_8922#1      TCAAAACGGCCAATCCGTTCCAACCGCAACAGCAGCAACCGCATGCACAGCAGCAAACGA 580
                      ************************************************************

consensus_8922#0      TGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACGCCGGATGCACGGCATCCGGTAA 1440
consensus_8922#1      TGGCTTGGCCTATCAGTGGTGCCATCAACGGTACGACGCCGGATGCACGGCATCCGGTAA 640
                      ************************************************************

consensus_8922#0      CGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTG 1500
consensus_8922#1      CGAACGGCGGGACTGGATTCTATGCTACATCACCCTATCAGGGAGGATTCGCTCACTCTG 700
                      ************************************************************

consensus_8922#0      CCAGCCCACAGCTTTACAACGGCAATGTTGGGAATGGTGGTAGCACTATGGGAGCTACGA 1560
consensus_8922#1      NCAGCCCACAGCTTTACAACGGCAATGNTGTGAATGGNGGTAGCACTATGGG-------- 752
                       ************************** ** ****** **************        

consensus_8922#0      TGGGGTATCTTCCTGCGATGGGCTACCCTCCCAATCATGGCAACAATGGTTATCCTGGAG 1620
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CGCAGGGAATGAACGGAGTTATGATGGGAGGACAGTTCAATGTAACGGCGAACGGCGGTG 1680
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GTGCTTCGATATTGGGCAACGTTGCAGGTGTCGGTAATCCGGTGCATCATTTTGCAAACT 1740
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      TTGGAAACCCTTTCATGGCTGCCGGTACTACAGCGGGAAACTCAAATAATCCTTTCTTAT 1800
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GAGTAGCTTCATAAGCCGTATGTATAGCTAGTAAATTATACATTTTACAAGAAAATGTTT 1860
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GGATGTGTGTTTTAGCATACGCTTCATTGTTTTTACATAGAAAGAGTTTATTCTGTTTCG 1920
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CTCTGTGCTGAACGGAGCGCAGCAAGAAGATGCATACAAATATTCAACACAATAGGAAAA 1980
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      TGAAGCGATAAACTGTGACGCAAGGAGCGCACAATATGTGTGCAACACATATACGTGAAT 2040
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CGTTCAAGGGATGTACATAAGTTTTAATTTAAACTAATTAAAAGTAAAAAAGAAAGCGAT 2100
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      AACTGATACATTCAAAGGAGTAAACATTATCGAAAGCGTGTAACATTAGCTTTATGTTGC 2160
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      TAAGCTCTGTATTCATTTTATTCAACCCATGACATGTTGGTTTGGGTCCCCCGCTACTGT 2220
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      TCGATAAAAGTATTGGAAAACAGGTTACAGCATGGCGGTTCATCCGTGAATTGGCGGGAC 2280
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      ACGCACGTGTTTCACAACCATACCAGTCAGTGATACAAAGCAGTGTATGAGGAAAACAAT 2340
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GTAGGAAAACAAAAGTAAACCAATCCATCTCTGCACAAGGTTTCATTTTCTCGGAGGTTT 2400
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CTGCTCTAGCTTTGATGGCAGCCAAGTAAATATAATAGATACGAAAATCGGCATTGCTAT 2460
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GCATAGCTAGAAGTAATAATTCTGCAAACCCGATTTTGAGCATCATTCAAAATTGGAAAT 2520
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      TCGTGCGGATGATTAACACACACAGCTGGGTTTATCCAATTACTTAATCACTGTTTCGGG 2580
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      AAAGTGCGTATGTTGTGTTTGTTGGCAGTGATTGTGAAGCAATTTTCGGTTAATTTTTAA 2640
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      ACAAAAATTAGTACACGAATATGCACCAACAAAACGAGAATGGGATAGAGCGTTGTAGTG 2700
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      ATGGTCATCATTACTAATACTACTATTACTATTGTTACTACTAACGTCACTACTATTACT 2760
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      AAACTCTTTCGAAAATATGGAACATTTTACGGCAACCGTCGTTTGGCGGGCGTGTAATGT 2820
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      ATGTGTATGTAGATGAACAGTTTGATGAACAAAGCTCTAACACTAACGATCAAATCGAAC 2880
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      AAAAACTCCGCTGTATGTTGGATTTACCAATCGATAATAAAACGAATCCTCCATGACAAA 2940
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      CTCGTTACACTTCGAAACAGTTCCGAAACCAAACCGAACCTACAAACAAACCTACTCAAT 3000
consensus_8922#1      ------------------------------------------------------------
                                                                                  

consensus_8922#0      GTACCGATCGAAACGTAAAACGAAATGTATCTTACTGATGGTTGTAAAAAAAA 3053
consensus_8922#1      -----------------------------------------------------
                                                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)