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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8924#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 977 fasta sequence
[GGAATTCCTCGAGAACTGTTGGCCAACTGGAAACACACCGACCGTCTCTTTCTTTTTCCGGCAAACTCTACGTGCTGTCGACACATTTTTGTGGTAGCAGCGCCAAGTTTTTGGATTTTCGTACACAATGGTCAGCCTTAAGGTACGCAGGAAGACCAGGAAGCTGCGTGGTCACGTCAGCCACGGCCACGGTCGTATTGGCAAGCACCGTAAGCATCCTGGTGGTCGCGGTAACGCTGGTGGTATGCACCATCACCGTATCAACTTCGACAAATACCATCCGGGTTACTTCGGCAAGGTCGGTATGCGAAACTTCCACCTGAACCGCAACCACAAGTTCTGCCCGACCATTAACCTCTCACATCTGTGGAGCCTGGTGCCGGAGAAGGTGCGCGAGGAGGCGAAGAAGAACCCCGAGAAGGTGCCGGTGGTTGATCTGGTCCAGTTCGGTTACTTCAAGCTGCTCGGATCCGGTGGACTCCCGAAGACTTGCGGCCCGATCATCGTGAAGGCGAAATTCTTCTCCCGCCTGGCCGAGGAGCGCATCAAGGCCGCCGGTGGTGCTTGCGTGCTGCGAGCTTAAGTCTGTAAGGATCTTGCACACACAAACCGACGTTACATGCTCGGAGTG-CTTCGGGGATGGATCGCAAAGGGATGCAGTTGTTCTGCGGTATCGCTATTGCGCCCGATTCCGAAGGCACACAGCCAACAACATCTCTCCCGCACACCCTCCCGAGCATGTTGCCGTTTTTGTTTTTGGTACAACGTTTCGTGTGTATTTCCTGTGCGTGAATGTGTGGAGCATGGTGGTGTGCCTCACTGCTGTTACGCATCGTACACGTACAAACACACACACACAGGAGTGAAGAGAAGATGAAGCAGAGAGTTGAAAAAGAGCAGAAGAAAATACAAGAAACCAATAT-CTAAAACACGTCAAAAAAAAAAAAAAGAAAAAAAAAAAAGGCCACATGTGCCCC]
[-] EMBL CNS09LI3 [GGAATTCCTCGAGAACTGTTGGCCAACTGGAAACACACCGACCGTCTCTTTCTTTTTCCGGCAAACTCTACGTGCTGTCGACACATTTTTGTGGTAGCAGCGCCAAGTTTTTGGATTTTCGTACACAATGGTCAGCCTTAAGGTACGCAGGAAGACCAGGAAGCTGCGTGGTCACGTCAGCCACGGCAACGGTCGTATTGGCAAGCACCGTAAGCATCCTGGTGGTCGCGGTAACGCTGGTGGTATGCACCATCACCGTATCAACTTCGACAAATACCATCCGGGTTACTTCGGCAAGGTCGGTATGCGAAACTTCCACCTGAACCGCAACCACAAGTTCTGCCCGACCATTAACGTCTCACATCTGTGGAGCCTGGTGCCGGAGAAGGTGCGCGAGGAGGCGAAGAAGAACCCCGAGAAGGTGCCGGTGGTTGATCTGGTCCAGTTCGGTTACTTCAAGCTGCTCGGATCCGGTGTACTCCCGAAGACTTGCGGCCCGATCATCGTGAAGGCGAAATTCTTCTCCCGCCTGGCCGAGGAGCGCATCAAGGCCGCCGGTGGTGCTTGCGTGCTGCGAGCTTAAGTCTGTAAGGATCTTGGACACACAAACCGACGTTACATGCTCGGAGTG CTTCGGGGATGGATCGCAAAGGGATGCAGTTGTTCTGCGGTATCGCTATTGCGCCCGATTCCGAAGGCAAACAGCCAACAACATCTCTCCCGGACACCCTCCCGAGCATGTTGCCGTTTTTGTTTTTGGTACAACGTTTCGTGTGTATTTCCTGTGCGTGAATGTGTGGAGCATGGTGGTGTGCCTGACTGCTGTTACGCATCGTACACGTACAA ACACACACACAGGAGTGAAGAGAAGATGAAGCAGAGAGTTGAAAAAGAGCAGAAGAAAATACAAGAAACCAATATACTAAAACACGTCAAAAAA ]
[-] EMBL CNS09QZG [ TTCCTCGAGAACTGTTGGCCAACTGGAAACACACCGACCGTCTCTTTCTTTTTCCGGCAAACTCTACGGGCTGTCCACACATTTTTGTGGTAGCAGCGCCAAGTTTTTGGATTTTCGTACACAATGGTCAGCCTTAAGGTACGCAGGAAGACCAGGAAGCTGCGTGGTCACGTCAGCCACGGCCACGGTCGTATTGGCAAGCACCGTAAGCATCCTGGTGGTCGCGGTAACGCTGGTGGTATGCACCATCACCGTATCAACTTCGACAAATACCATCCGGGTTACTTCGGCAAGGTCGGTATGCGAAACTTCCACCTGAACCGCAACCACAAGTTCTGCCCGACCATTAACCTCTAACATCTGTGGAGCCTGGTGCCGGAGAAGGTGCGCGAGGAGGCGAAGAAGAACCCCGAGAAGGTGCCGGTGGTTGATCTGGTCCAGTTCGGTTACTTCAAGCTGCTCGGATCCGGTGGACTCCCGAAGACTTGCGGCCCGATCATCGTGAAGGCGAAATTCTTCTCCCGCCTGGCCGAGGAGCGCATCAAGGCCGCCGGTGGTGCTTGCGTGCTGCGAGCTTAAGTCTGTAAGGGTCTTGCGCACACAAACCGACGTTACATGCTCGGAGTG CTTCGGGGATGGATCGCAAAGGGATGCAGTTGTTCTGCGGTATCGCTATTGCGCCCGATTCCGAAGGCACACAGCCAACAACATTTCTCCCGCACACCCTCCCGAGCATGTTGCCGTTTTTGTTTTTGGTACAACGTTTCGTGTGTATTTCCTGTGCGTGAATGTGTGGAGCATGGTGGTGTGCCTCACTGCTGTTACGCATCGTACACGTACAAACACGCACACACAGGAGTGAAGAGAAGATGAAGCAGAGAGTTGAAAAAGAGCAGAAGAAAATACAAG ]
[-] EMBL CNS097OA [ GAACTGTTGGCCTACTGG ACCGACCGTCTCTTTCTTTTTCCGGCAAACTCTACGTGCTGTCGACACATTTTTGTGGTAGCAGCGCCAAGTTTTTGGATTTTCGTACACAATGGTCAGCCTTAAGGTACGCAGGAAGACCAGGAAGCTGCGTGGTCACGTCAGCCACGGCCACGGTCGTATTGGCAAGCACCGTAAGCATCCTGGTGGTCGCGGTAACGCTGGTGGTATGCACCATCACCGTATCAACTTCGACAAATACCATCCGGGTTACTTCGGCAAGGTCGGTATGCGAAACTTCCACCTGAACCGCAACCACAAGTTCTGCCCGACCATTAACCTCTCACATCTGTGGAGCCTGGTGCCGGAGAAGGTGCGCGAGGAGGCGAAGAAGAACCCCGAGAAGGTGCCGGTGGTTGATCTGGTCCAGTTCGGTTACTTCAAGCTGCTCGGATCCGGTGGACTCCCGAAGACTTGCGGCCCGATCATCGTGAAGGCGAAATTCTTCTCCCGCCTGGCCGAGGAGCGCATCAAGGCCGCCGGTGGTGCTTGCGTGCTGCGAGCTTAAGTCTGTAAGGATCTTGAACACACAAACCGACGTTACATGCTCGGAGTG CTTCGGGGATGGATCGCAAAGGGATGCAGTTGTTCTGCGGTATCGCTATTGCGCCCGATTCCGAAGGCACACAGCCAACAACATCTCTCCCGCACACCCTCCCGAGCATGTTGCCGTTTTTGTTTTTGGTACAACGTTTCGTGTGTATTTCCTGTGCGTGAATGTGTGGAGCATGGTGGTGTGCCTCACTGCTGTTACGCATCGTACACGTACAAACACACACACACAGGAGTGAAGAGAAGATGAAGCAGAGAGTTGAAAAAGAGCAGAAGAAAATACAAGAAACCAATAT CTta ]
[+] EMBL CNS08IV7 [ tcAAACACACCGACCGTCTCTTTCTTTTTCCGGCAAACTCTACGTGCTGTCGACACATTTTTGTGGTAGCAGCGCCAAGTTTTTGGATTTTCGTACACAATGGTCAGCCTTAAGGTACGCAGGAAGACCAGGAAGCTGCGTGGTCACGTCAGCCACGGCCACGGTCGTATTGGCAAGCACCGTAAGCATCCTGGTGGTCGCGGAAACGCTGGTGGTATGCACCATCACCGTATCAACTTCGACAAATACCATCCGGGTTACTTCGGCAAGGTCGGTATGCGAAACTTCCACCTGAACCGCAACCACAAGTTCTGCCCGACCATTAACCTCTCACATCTGTGGAGCCTGGTGCCGGAGAAGGTGCGCGAGGAGGCGAAGAAGAACCCCGAGAAGGTGCCGGTGGTTGATCTGGTCCAGTTCGGTTACTTCAAGCTGCTCGGATCCGGTGGACTCCCGAAGACTTGCGGCCCGATCATCGTGAAGGCGAAATTCTTCTCCCGCCTGGCCGAGGAGCGCATCAAGGCCGCCGGTGGTGCTTGCGTGCTGCGAGCTTAAGTCTGTAAGGATCTTGCACACACAAACCGACGTAACATGCTCGGAGTGCCTTCGGGGATGGATCGCAAAGGGATGCAGTTGTTCTGCGGTATCGCTATTGCGCCCGATTCCGAA GCACACAGCCAACAACATCTCTCCCGCACACCCTCCCGAGCATGTTGCCGTTTTTGTTTTTGGTACAACGTTTCGTGTGTATTTCCTGTGCGTGAATGTGTGGAGCATGGTGGTGTGCCTCACTGCTGTGACGCATCGTACACGTACAAACACACACACACAGGAGTTAAGAGAAGATGAAGCAGAGAGTTGAAAAAGAGCAGAAGAAAATACAAGAAACCAATAT CTAAAACACGTCAAAAAAAAAAAAAAGAAAAAAAAAAAAGGCCACATGTGCCCC]
consensusID : consensus_8924#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 693 fasta sequence
[AGGCAAGAATCCCCCCGAGGTTATACACATCCAAGCCACCACCTCTCACCATGTATCTGGNTACAGTCAAATCTCAGCTCGCAAAAACGTACCATGCCACAGCGCGGTCTCCAAAGCCACGCAAGCAAGCGAACGAAAATGTCCATCAGTGCCAGCAGCGACGGATTGGATACATCGGACTCGACGCCTGGCACAGGTGCAAACCGTGCAGACGGTGCAAATAGTGAAGCAAATTCCCGCGCAAGTGATCGAACCGGAATACATTGAGCTCCCGATCGAATCGATAAATCCCAAGGGCTGAACCGGACTACACTGATTGAGACGGCCGAGCATCGAAACGGTGGACGCTGAAACGGAACAGGAACAGAAGCTCTACGGAACACGACCAAGGTGATGCCGACGATGATGGAAACTACGCTGGAAGACGACACTTACGCGTGACATGGCCATGGGCAAGTACGAACGAATCCTACTTGACGGGAGTGGCGAGCGANACGATGCGAACACCTGGCCGGTNANTCCTGGATTCCGGTAGGACCTCGGTAACACCAATTCGTGCACNGGACGCNGAAAAACTNGCGGAACGGGNAAAATTTTCGNAACCACCATAANCGCACACCTGNGNGCCGAACATCCCGTAATTTCCGCCTCNTTATACCCCGGGANACAAGCCATCCCGCGCCCGGCNGCCCC]
[+] EMBL AL694936 [AGGCAAGAATCCCCCCGAGGTTATACACATCCAAGCCACCACCTCTCACCATGTATCTGGNTACAGTCAAATCTCAGCTCGCAAAAACGTACCATGCCACAGCGCGGTCTCCAAAGCCACGCAAGCAAGCGAACGAAAATGTCCATCAGTGCCAGCAGCGACGGATTGGATACATCGGACTCGACGCCTGGCACAGGTGCAAACCGTGCAGACGGTGCAAATAGTGAAGCAAATTCCCGCGCAAGTGATCGAACCGGAATACATTGAGCTCCCGATCGAATCGATAAATCCCAAGGGCTGAACCGGACTACACTGATTGAGACGGCCGAGCATCGAAACGGTGGACGCTGAAACGGAACAGGAACAGAAGCTCTACGGAACACGACCAAGGTGATGCCGACGATGATGGAAACTACGCTGGAAGACGACACTTACGCGTGACATGGCCATGGGCAAGTACGAACGAATCCTACTTGACGGGAGTGGCGAGCGANACGATGCGAACACCTGGCCGGTNANTCCTGGATTCCGGTAGGACCTCGGTAACACCAATTCGTGCACNGGACGCNGAAAAACTNGCGGAACGGGNAAAATTTTCGNAACCACCATAANCGCACACCTGNGNGCCGAACATCCCGTAATTTCCGCCTCNTTATACCCCGGGANACAAGCCATCCCGCGCCCGGCNGCCCC]
consensusID : consensus_8924#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 691 fasta sequence
[CCGATGCAATGCAGTGTGTCTATTGATCAGCTCGTGCAACGTAAGTTATTAATCCAACCGCTTCCAACATTGCAGGCGAGTTGTACACATCGGAAAAACGTGGCAACGATGAAACGGGCAAAGGCACGGCAGAGGAACCCTTCAAAACCATTCTCCGGGCGATGAAGCATGCCGGCAAGGAACCGTTCCCCACGATCTACGCCGACAGCAAGGACGAGAAAGCGGAATCCCCGTACGAGGTGGCCGCCAAGTCGCAGCTGAAGAAGATCCAAAAGATCTGGGCCCGCGACAACATGAAGGGCGACAAGCAGAAGCGCGAGGAGGAAGAGAAGGCCAAGAACCGGGAACAGAACCTGGAGGAGGCGAAGAAGATCACCATCCAGGAGGATCCGTCCTGGCCGGCAGCCAAATCGATCAAGATTACGCACGGTGCCGACAATCGGGGCGTTCGCGTTCGCATCTACGGATGGGTGCATCGGCTGCGCCGACAGGGCAAGGGCTTGATGTTTATCACACTGCGCGACGGTACCGGGTTTCTGCAGTGCGTGCTGACCGACACCCTGTGCCAAACGTACAATGCGCTCGTGCTGTCGACGGAATCATCGGTGCAGCTGTTCGGTACGCTGAAGGAGGTACCCGCCGGCAAAACGGCACCCGGTGGGCACGAGCTGCACGCGGACTACTGGGAGCT]
[+] EMBL BM638086 [CCGATGCAATGCAGTGTGTCTATTGATCAGCTCGTGCAACGTAAGTTATTAATCCAACCGCTTCCAACATTGCAGGCGAGTTGTACACATCGGAAAAACGTGGCAACGATGAAACGGGCAAAGGCACGGCAGAGGAACCCTTCAAAACCATTCTCCGGGCGATGAAGCATGCCGGCAAGGAACCGTTCCCCACGATCTACGCCGACAGCAAGGACGAGAAAGCGGAATCCCCGTACGAGGTGGCCGCCAAGTCGCAGCTGAAGAAGATCCAAAAGATCTGGGCCCGCGACAACATGAAGGGCGACAAGCAGAAGCGCGAGGAGGAAGAGAAGGCCAAGAACCGGGAACAGAACCTGGAGGAGGCGAAGAAGATCACCATCCAGGAGGATCCGTCCTGGCCGGCAGCCAAATCGATCAAGATTACGCACGGTGCCGACAATCGGGGCGTTCGCGTTCGCATCTACGGATGGGTGCATCGGCTGCGCCGACAGGGCAAGGGCTTGATGTTTATCACACTGCGCGACGGTACCGGGTTTCTGCAGTGCGTGCTGACCGACACCCTGTGCCAAACGTACAATGCGCTCGTGCTGTCGACGGAATCATCGGTGCAGCTGTTCGGTACGCTGAAGGAGGTACCCGCCGGCAAAACGGCACCCGGTGGGCACGAGCTGCACGCGGACTACTGGGAGCT]
consensusID : consensus_8924#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 681 fasta sequence
[CCGGTCCGTGTGTGTGTGCGCGACAAATTGTGAGTCAAGGTGAAATTTGTGTGCGAGAAAAGTAGGAAAAAAAAAAGAATATCCCTAACCCAGCGCCACCTTCCTTCCACACCATCCTCCTGCCTCCCCAAGTAACCCTACAGCGTCACGGCAAGTTGTGGGTCATTTTTGTGTGCGTGTGCGTTTGAGTGAGTGTGTGTGTGTGGCATGTGTGTAAGGTGTGCGTTATCCTCCTCTTTGTGTGTGCAGTGTGCGACGAAAATTGTGCGAAAGCAACCTTGCGACTGTGTGTGCGTGTGTCTGCACACACATTCACACACATAGTCAACTATACAGACACACATACATACACACAAACACACACACTTTACGTACGCAACACTGCCGAAACGGAACTTGCGTTGAAAAAGGACACCGGACACAAGATCACTCTCCCCGTGCCAGGAGTCATCGTACCCCGCATTGTCCTGTGAGGTGAAACAATCACAATTAAACCCGCTCCCTCCCTTTCCCCCATTTCATTATTTGCTGTAGGTCATCGCACCGTGGGAAAAAAACGCCAAAAGTCCATACAGAGGCAGCAGTGTAGCCATCCAACAGTTCTTCTCAAAAAAAGGGAAAACAATACCCCTTCCTTCGATGAACTCAGTGTATGACTCAACTGCAGAACAACATAGCAAG]
[+] EMBL BM611730 [CCGGTCCGTGTGTGTGTGCGCGACAAATTGTGAGTCAAGGTGAAATTTGTGTGCGAGAAAAGTAGGAAAAAAAAAAGAATATCCCTAACCCAGCGCCACCTTCCTTCCACACCATCCTCCTGCCTCCCCAAGTAACCCTACAGCGTCACGGCAAGTTGTGGGTCATTTTTGTGTGCGTGTGCGTTTGAGTGAGTGTGTGTGTGTGGCATGTGTGTAAGGTGTGCGTTATCCTCCTCTTTGTGTGTGCAGTGTGCGACGAAAATTGTGCGAAAGCAACCTTGCGACTGTGTGTGCGTGTGTCTGCACACACATTCACACACATAGTCAACTATACAGACACACATACATACACACAAACACACACACTTTACGTACGCAACACTGCCGAAACGGAACTTGCGTTGAAAAAGGACACCGGACACAAGATCACTCTCCCCGTGCCAGGAGTCATCGTACCCCGCATTGTCCTGTGAGGTGAAACAATCACAATTAAACCCGCTCCCTCCCTTTCCCCCATTTCATTATTTGCTGTAGGTCATCGCACCGTGGGAAAAAAACGCCAAAAGTCCATACAGAGGCAGCAGTGTAGCCATCCAACAGTTCTTCTCAAAAAAAGGGAAAACAATACCCCTTCCTTCGATGAACTCAGTGTATGACTCAACTGCAGAACAACATAGCAAG]
consensusID : consensus_8924#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 626 fasta sequence
[CCGCGGACGCGTGGGCTGTGTAGCAAGGTTTTTTTACTTTCTTCGTGACCGTCGGACAATCCGTAACACTCAGCCAAAATGTGTGATGATGATGCGGGAGCACTAGTCATCGACAATGGATCCGGAATGTGCAAGGCCGGATTCGCTGGCGATGACGCACCACGTGCTGTCTTCCCGTCCATTGTTGGCCGTCCACGCCACCAGGGTGTGATGGTCGGTATGGGTCAGAAGGATGCGTACGTCGGTGATGAGGCTCAATCGAAACGTGGTATCCTCACCCTGAAGTACCCGATCGAGCACGGTATCATCACCAACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAGCTGCGCGTTGCTCCAGAGGAACATCCGGTCCTGCTGACGGAGGCCCCGCTGAACCCGAAATCCAACCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCGCGTCGCCAGCAGTGTACGTCGCTATTCAGGCCGTGCTGTCCCTGTACGCTTCCGGTCGTACCACCGGTATTGTGCTGGACTCTGGAGATGGTGTATCCCACACCGTCCCAATCTATGAAGGTTATGCTCTGCCGCACGCGATCCTTCGTATGGATCTGGCTGG]
[+] EMBL BM623877 [CCGCGGACGCGTGGGCTGTGTAGCAAGGTTTTTTTACTTTCTTCGTGACCGTCGGACAATCCGTAACACTCAGCCAAAATGTGTGATGATGATGCGGGAGCACTAGTCATCGACAATGGATCCGGAATGTGCAAGGCCGGATTCGCTGGCGATGACGCACCACGTGCTGTCTTCCCGTCCATTGTTGGCCGTCCACGCCACCAGGGTGTGATGGTCGGTATGGGTCAGAAGGATGCGTACGTCGGTGATGAGGCTCAATCGAAACGTGGTATCCTCACCCTGAAGTACCCGATCGAGCACGGTATCATCACCAACTGGGATGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAGCTGCGCGTTGCTCCAGAGGAACATCCGGTCCTGCTGACGGAGGCCCCGCTGAACCCGAAATCCAACCGTGAGAAGATGACCCAGATCATGTTTGAGACCTTCGCGTCGCCAGCAGTGTACGTCGCTATTCAGGCCGTGCTGTCCCTGTACGCTTCCGGTCGTACCACCGGTATTGTGCTGGACTCTGGAGATGGTGTATCCCACACCGTCCCAATCTATGAAGGTTATGCTCTGCCGCACGCGATCCTTCGTATGGATCTGGCTGG]
consensusID : consensus_8924#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 565 fasta sequence
[CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGCAGCAGGCGCCCTTCGGATAAATTTGCGCAAATTCTCCAAAAAGCGTAATCTACAGCCCTCAAGATGAGACTGCCGATGGGACGTAAACAAGCCGAACAGGC-CGC-TCAGTGGGCCTCTTCTGCCGCCGCTTACGGAGCTGCTGCGGCGCTGGT-TGGATGCTACCTGACCGACTGGAAGGTGATCGTGTCGTACATCCCCTTCTACGGCGGCAAATTCGACAAGAAGGAATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTCTCGCTCAGTGGACACATCGAGAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTG--GCCCCCTCGCACAGTACAATGCCAACAAATTTGCAGTTCAATAAGAGTTCACTGCTGAGCAAAAAACAATACCAAAATCGGCTTCTAACGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAAAAAAAAACGGACGCGTGGGCGG]
[+] EMBL BM632015 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGCAGCAGGCGCCCTTCGGATAAATTTGCGCAAATTCTCCAAAAAGCGTAATCTACAGCCCTCAAGATGAGACTGCCGATGGGACGTAAACAAGCCGAACAGGC CGC TCAGTGGGCCTCTTCTGCCGCCGCTTACGGAGCTGCTGCGGCGCTGGT TGGATGCTACCTGACCGACTGGAAGGTGATCGTGTCGTACATCCCCTTCTACGGCGGCAAATTCGACAAGAAGGAATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTCTCGCTCAGTGGACACATCGAGAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTG GCCCCCTCGCACAGTACAATGCCAACAAATTTGCAG ]
[+] EMBL BM655074 [ CCGCGGACGCGTGGGGCAGCAGGCGCCCTTCGGATAAATTTGCGCAAATTCTCCAAAAAGCGTAATCTACAGCCCTCAAGATGAGACTGCCGATGGGACGTAAACAAGCCGAACAGGC CGC TCAGTGGGCCTCTTCTGCCGCCGCTTACGGAGCTGCTGCGGCGCTGAT TGGATGCTACCTGACCGACTGGAAGGTGATCGTGTCGTACATCCCCTTCTACGGCGGCAAATTCGACAAGAAGGAATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTCTCGCTCAGTGGACATATCGAAAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCGATGAAGCCCCCTCGCACAGTACAATGCCAACAAATTTGCAGTTCAATAAGAGTTCACTGCTGAGCAAAAAAC ]
[+] EMBL CNS08S3B [ ATCTACAGCCCTCAAGATGAGACTGCCGATGGGACGTAAACAAGCCGAACAGGCACGCATCAGTGGGCCTCTTCTGCCGCCGCTTACGGAGCTGCTGCGGCGCTGGTATGGATGCTACCTGACCGACTGGAAGGTGATCGTGTCGTACATCCCCTTCTACGGCGGCAAATTCGACAAGAAGGAATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTCTCGCTCAGTGGACACATCGAGAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTG GCCCCCTCGCACAGTACAATGCCAACAAATTTGCAGTACAATAAGAGTTCACTGCTGAGCAAAAAACAATACCAAAATCGGCTTCTAACGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAC ]
[-] EMBL BM590352 [ tGACAAGAAGGAATAGGCCCGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTTTCGCTCAGTGGACCCATCGAAAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCCCGTCAAGGAGAGGGTGAAACCATCCGATGAAGCCCCCTCGCCCAGTACAATGCCAACAAATTTGCAGTTCAATAAGAGTTCCCTGCTGAGCAAAAAACAATACCAAAATCGGCTTTTTCCGGTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACGGACGCGTGGGCGG]
consensusID : consensus_8924#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 452 fasta sequence
[TCTACAGCCCTCAAGCATGAGACTGCCGATGGGACGTAAACAAGCCGAACAGGCCGCTCAGTGGGCCTCTTCTGCCGCCGCTTACGGAGCTGCTGCGGCGCTGGTTGGATGCTACCTGACCGACTGGAAGGTGATCGTGTCGTACATCCCCTTCTACGGCGGCAAATTCGACAAGAAGGAATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTCTCGCTCAGTGGACACATCGAGAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTGGCCCCCTCGCACAGTACAATGCCAACAAATTTGCAGTTCAATAAGAGTTCACTGCTGAGCAAAAAACAATACCAAAATCGGCTTCTAACGGTTAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTC]
[+] EMBL CNS08GVU [TCTACAGCCCTCAAGCATGAGACTGCCGATGGGACGTAAACAAGCCGAACAGGCCGCTCAGTGGGCCTCTTCTGCCGCCGCTTACGGAGCTGCTGCGGCGCTGGTTGGATGCTACCTGACCGACTGGAAGGTGATCGTGTCGTACATCCCCTTCTACGGCGGCAAATTCGACAAGAAGGAATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTATAGCAAAATTCTCGCTCAGTGGACACATCGAGAGGAGAGTATCCGGAATGAGGCTGCAGGGCGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTGGCCCCCTCGCACAGTACAATGCCAACAAATTTGCAGTTCAATAAGAGTTCACTGCTGAGCAAAAAACAATACCAAAATCGGCTTCTAACGGTTAAAAAAAAAAAAAAAAAAAGGCCACATGTGCTC]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_8924#5 ------------------------------------------------------------
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 GGAATTCCTCGAGAACTGTTGGCCAACTGGAAACACACCGACCGTCTCTTTCTTTTTCCG 60
consensus_8924#1 ------------------------------------------------------------
consensus_8924#4 ------------------------------------------------------------
consensus_8924#2 ------------------------------------------------------------
consensus_8924#3 ------------------------------------------------------------
consensus_8924#5 ------------------------------------------------------------
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 GCAAACTCTACGTGCTGTCGACACATTTTTGTGGTAGCAGCGCCAAGTTTTTGGATTTTC 120
consensus_8924#1 ------------------------------------------------------------
consensus_8924#4 ------------------------------------------------------------
consensus_8924#2 ------------------------------------------------------------
consensus_8924#3 ------------------------------------------------------------
consensus_8924#5 ------------------------------------------------------------
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 GTACACAATGGTCAGCCTTAAGGTACGCAGGAAGACCAGGAAGCTGCGTGGTCACGTCAG 180
consensus_8924#1 ------------------------------------------------------------
consensus_8924#4 ------------------------------------------------------------
consensus_8924#2 ------------------------------------------------------------
consensus_8924#3 ------------------------------------------------------------
consensus_8924#5 ------------------------------------------------------------
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 CCACGGCCACGGTCGTATTGGCAAGCACCGTAAGCATCCTGGTGGTCGCGGTAACGCTGG 240
consensus_8924#1 ------------------------------------------------------------
consensus_8924#4 ------------------------------------------------------------
consensus_8924#2 ------------------------------------------------------------
consensus_8924#3 ------------------------------------------------------------
consensus_8924#5 ------------------------------------------------------------
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 TGGTATGCACCATCACCGTATCAACTTCGACAAATACCATCCGGGTTACTTCGGCAAGGT 300
consensus_8924#1 ------AGGCAAGAATCCCCCCGAGGTTATACACATCCAAGCCACCACCTCTCACCATGT 54
consensus_8924#4 ------------------------------------------------------------
consensus_8924#2 ---------------------------CCGATGCAATGCAGTGTGTCTATTGATCAGCTC 33
consensus_8924#3 -------------------------------------------------CCGGTCCGTGT 11
consensus_8924#5 ------------------------------------------------------------
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 CGGTATGCGAAACTTCCACCTGAACCGCAACCACAAGTTCTGCCCGACCATTAACCTCTC 360
consensus_8924#1 ATCTGGNTACAGTCAAATCTCAGCTCGCAAAAACGTACCATGCCACAGCGCGGTCTCC-- 112
consensus_8924#4 ------------------------CCGCGGACGCGTGGGCTGT-GTAGCAAGGTTTTTTT 35
consensus_8924#2 GTGCAACGTAAGTTATTAATCCAACCGCTTCCAACATTGCAGGCGAGTTGTACACATCGG 93
consensus_8924#3 GTGTGTGCGCGACAAATTGTGAGTCA--AGGTGAAATTTGTGTGCGAGAAAAGTAGGAAA 69
consensus_8924#5 ----CCGCCCACGCGTCCGCCCACGCGTCCGCCCA-CGCGTCCGGCAGCAGGCGCCCTTC 55
consensus_8924#6 ------------------------------------------------------------
consensus_8924#0 ACATCTGTGGAGCCTGGTGCCGGAGAAGGTGCGCG-AGGAGGCGAAGAAGAACCCCGAGA 419
consensus_8924#1 AAAGCCACGCAAGCAAGCGAACGAAAATGTCCATC-AGTGCCAGCAGCGACGGATTGGAT 171
consensus_8924#4 ACTTTCTTCGTGACCGTCGGACAATCCGTAACACT-CAGCCAAAATGTGTGATGATGATG 94
consensus_8924#2 AAAAACGTGGCAACGATGAAACGGGCAAAGGCACGGCAGAGGAACCCTTCAAAACCATTC 153
consensus_8924#3 AAAAAAAGAATATCCCTAACCCAGCGCCACCTTCCTTCCACACCATCCTCCTGCCTCCCC 129
consensus_8924#5 GGATAAATTTGCGCAAATTCTCCAAAAAGCGTAATCTACAG--CCCTCAAG-ATGAGACT 112
consensus_8924#6 ----------------------------------TCTACAG--CCCTCAAGCATGAGACT 24
consensus_8924#0 AGGTGCCGGTGGTTGATCTGGTCCAGTTCGGTTACTTCAAG--CTGCTCGG-ATCCGGTG 476
consensus_8924#1 ACATCGGACTCGACGCCTGGCACAGGTGCAAACCGTGCAGA--CGGTGCAAATAGTGAAG 229
consensus_8924#4 CGGGAGCACTAGTCATCGACAATGGATCCGGAATGTGCAAGGCCGGATTCGCTGGCGATG 154
consensus_8924#2 TCCGGGCGATGAAGCATGCCGGCAAGGAACCGTTCCCCACGATCTACGCCGACAGCAAGG 213
consensus_8924#3 AAGTAACCCTACAGCGTCACGGCAAGTTGTGGGTCATTTTTGTGTGCGTGTGCGTTTGAG 189
consensus_8924#5 GCCGATGGGACGTAAACAAGCCGAACAGGCCGCTCAGTGGGCCTCTTCT--GCCGCC-GC 169
consensus_8924#6 GCCGATGGGACGTAAACAAGCCGAACAGGCCGCTCAGTGGGCCTCTTCT--GCCGCC-GC 81
consensus_8924#0 GACTCCCGAAGACTTGCGGCCCGATCATCGTGAA-GGCGAAATTCTTCT--CCCGCCTGG 533
consensus_8924#1 CAAATTCCCGCGCAAGTGATCGAACCGGAATACATTGAGCTCCCGATCGAATCGATAAAT 289
consensus_8924#4 ACGCACCACGTGCTGTCTTCCCGTCCATTGTTGGCCGTCCACGCCACCAGGGTGTGATGG 214
consensus_8924#2 ACGA---GAAAGCGGAATCCCCGTACGAGGTGGCCGCCAAGTCGCAGCT--GAAGAAGAT 268
consensus_8924#3 TGAGTGTGTGTGTGTGGCATGTGTGTAAGGTGTGCGTTATCCTCCTCTTTGTGTGTGCAG 249
consensus_8924#5 TTACGGAGCT-------GCTGC--GGCGCTGGTTGGATGCTACCTGACCGA--CTGGA-A 217
consensus_8924#6 TTACGGAGCT-------GCTGC--GGCGCTGGTTGGATGCTACCTGACCGA--CTGGA-A 129
consensus_8924#0 CCGAGGAGCGCATCAAGGCCGCC-GGTGGTGCTTGCGTGCTGCGAGCTTAAGTCTGTA-A 591
consensus_8924#1 CCCAAGGGCTGAACCGGACTAC-----ACTGATTGAGACGGCCGAGCATCGAAACGGT-G 343
consensus_8924#4 TCGGTATGGGTCAGAAGGATGCG-TACGTCGGTGATGAGGCTCAATCGAAA---CGTG-G 269
consensus_8924#2 CCAAAAGATCTGGGCCCGCGACAACATGAAGGGCGACAAGCAGAAGCGCGA----GGA-G 323
consensus_8924#3 TGTGCGACGAAAATTGTGCGAAA--GCAACCTTGCGACTGTGTGTGCGTGTGTCTGCACA 307
*
consensus_8924#5 GGTGATCGTGT--------CG----TACATCCCC----TTCTACGGCGGCAAAT-TCGAC 260
consensus_8924#6 GGTGATCGTGT--------CG----TACATCCCC----TTCTACGGCGGCAAAT-TCGAC 172
consensus_8924#0 GGATCTTGCACACACAAACCGACGTTACATGCTCGGAGTGCTTCGGGGATGGAT-CGCAA 650
consensus_8924#1 GACGCTGAAACGGA-ACAGGAACAGAAGCTCTACGGAACACGACCAAGGTGATG-CCGAC 401
consensus_8924#4 TATCCTCACCC--------TGAAGTACCCGATCGAGCACGGTATCATCACCAAC-TGGGA 320
consensus_8924#2 GAAGAGAAGGCCAAGAACCGGGAACAGAACCTGGAGGAGGCGAAGAAGATCACCATCCAG 383
consensus_8924#3 CACATTCACACA-------CATAGTCAACTATACAGACACACATACATACACACAAACAC 360
consensus_8924#5 AAGAAGG-AATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTA--TAG 317
consensus_8924#6 AAGAAGG-AATAGGCACGGTCAGACTCGCATCGCGGCTAGCTTTAAATTCGGTTA--TAG 229
consensus_8924#0 AGGGATG-CAGTTGTTCTGCGGTATCGCTATTGCGCCCGATTCCGAAGGCACACAGCCAA 709
consensus_8924#1 GATGATGGAAACTACGCTGGAAGACGACACTTACGCGTGACAT-GGCCATGGGCAAGTAC 460
consensus_8924#4 TGATATGGAGAAGATCTGGCATCACACCTTCTACAATGAGCTGCGCGTTGCTCCAG--AG 378
consensus_8924#2 GAGGATCCGTCCTGGCCGGCAGCCAAATCGATCAAGATTACGCACGGTGCCGACAATCGG 443
consensus_8924#3 ACACACTTTACGTACGCAACACTGCCG-AAACGGAACTTGCGTTGAAAAAGGACACCGGA 419
* *
consensus_8924#5 CAAAAT---TCTCGCTCAGT-----GGACACATCGAGAGGAGAGTATCCGGAATGAGGCT 369
consensus_8924#6 CAAAAT---TCTCGCTCAGT-----GGACACATCGAGAGGAGAGTATCCGGAATGAGGCT 281
consensus_8924#0 CAACATCTCTCCCGCACACCCTCCCGAGCATGTTGCCGTTTTTGTTTTTGGTACAACGTT 769
consensus_8924#1 GAACGA--ATCCTACTTGAC-----GGGAGTGGCGAGCGANACGATGCGAACACCTGGCC 513
consensus_8924#4 GAACATCCGGTCCTGCTGAC-----GGAGGCCCCGCTGAACCCGAAATCCAACCGTGAGA 433
consensus_8924#2 GGCGTTCGCGTTCGCATCTACGGATGGGTGCATCGGCTGCGCCGA--CAGGGCAAGGGCT 501
consensus_8924#3 CACAAGATCACTCTCCCCGT-GCCAGGAGTCATCGTACCCCGCATTGTCCTGTGAGGTGA 478
* *
consensus_8924#5 GCAGGG--------CGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTGGC----- 416
consensus_8924#6 GCAGGG--------CGTGCTTGCACGTCAAGGAGAGGGTGAAACCATCCACTGGC----- 328
consensus_8924#0 TCGTGTGTATTTCCTGTGCGTGAATGTGTGGAGCATGGTGGTGTGCCTCACTGCTGTT-A 828
consensus_8924#1 GGTNAN-----------TCCTGGATTCCGGTAGGACCTCGGTAACACCAATTCGTGC--A 560
consensus_8924#4 AGATGA-----------CCCAGATCATGTTTGAGACCTTCGCGTCGCCAGCAGTG----- 477
consensus_8924#2 TGATGTTTATCAC---ACTGCGCGACGGTACCGGGTTTCTGCAGTGCGTGCTGACCGACA 558
consensus_8924#3 AACAATCACAATTAAACCCGCTCCCTCCCTTTCCCCCATTTCATTATTTGCTGTAGG--- 535
consensus_8924#5 CCCCTCGC-ACA-GTACAATGCCA-----ACAAATTTGCAGTTCAATAA-GAGTTCACTG 468
consensus_8924#6 CCCCTCGC-ACA-GTACAATGCCA-----ACAAATTTGCAGTTCAATAA-GAGTTCACTG 380
consensus_8924#0 CGCATCGT-ACACGTACAAACACACACACACAGGAGTGAAGAGAAGATG-AAGCAGAGAG 886
consensus_8924#1 CNGGACGC-NGAAAAACTNGCGGAACGGGNAAAATTTTCGNAACCACCATAANCGCACAC 619
consensus_8924#4 TACGTCGCTATTCAGGCCGTGCTGTCCCTGTACGCTTCCGGTCGTACCACCGGTATTGTG 537
consensus_8924#2 CCCTGTGCCAAACGTACAATGCGC-----TCGTGCTGTCGACGGAATCATCGGTGCAGCT 613
consensus_8924#3 -TCATCGCACCGTGGGAAAAAAACGCCAAAAGTCCATACAGAGGCAGCAGTGTAGCCATC 594
*
consensus_8924#5 CTGA------GCAAAAAACAATACCA-AAATCGGCTTCTAA--CGGTTAAAAAAAAAAAA 519
consensus_8924#6 CTGA------GCAAAAAACAATACCA-AAATCGGCTTCTAA--CGGTTAAAAAAAAAAAA 431
consensus_8924#0 TTGAAAAAGAGCAGAAGAAAATACAAGAAACCAATATCTAAAACACGTCAAAAAAAAAAA 946
consensus_8924#1 CTGN------GNGCCGAACATCCCGTAATTTCCGCCTCNTTA-TACCCCGGGANACAAGC 672
consensus_8924#4 CTGG------ACTCTGGAGATGGTGT--ATCCCACACCGTCC-CAATCTATGAAGGTTAT 588
consensus_8924#2 GTTCGGTAC-GCTGAAGGAGGTACCCGCCGGCAAAACGGCACCCGGTGGGCACGAGCTGC 672
consensus_8924#3 CAACAGTTCTTCTCAAAAAAAGGGAAAACAATACCCCTTCCTTCGATGAACTCAGTGTAT 654
consensus_8924#5 AAAAAAAAAAAAAAAAGGCCACAAAAAAAAACGGACGCGTGGGCGG 565
consensus_8924#6 AAAAAAAGGCCACATGTGCTC------------------------- 452
consensus_8924#0 AAAGAAAAAAAAAAAAGGCCACATGTGCCCC--------------- 977
consensus_8924#1 CATCCCGCGCCCGGCNGCCCC------------------------- 693
consensus_8924#4 GCTCTGCCGCACGCGATCCTTCGTATGGATCTGGCTGG-------- 626
consensus_8924#2 ACGCGGACTACTGGGAGCT--------------------------- 691
consensus_8924#3 GACTCAACTGCAGAACAACATAGCAAG------------------- 681
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| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||