These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8928#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 851 fasta sequence [CTGTTGGCCCACTGGCTTTTTTCCGTTTCCTCTTTAACGAAGCGCAGTCAAGATGAAAGCTAA-AGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAA-CTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCA-CTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGTGCTA-CAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCGCACATCAAGCAG-TTC-CACAACCC------GAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAGTGCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACCGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCTTTGAGCAAAGTTGAAACAAAAGGAGAGGTGAATAAAAGAAGGAGTATGGTGAAGATATACCGTATCGTCAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGGGG] [-] EMBL CNS09RMQ [CTGTTGGCCCACTGGCTTTTTTCCGTTTCCTCTTTAACGAAGCGCAGTCAAGATGAAAGCTAA AGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAAGCTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCAGCTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGTGCTA CAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCGCACATCAAGCAG TTC CACAACCC GAAAACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAGTGCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACCGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCTTTGAGCAAAGTTGAAACAAAAGGAGAGGTGAATAAAAGAAGGAGTATGGTGA ] [+] EMBL CNS09RMP [ TTAACG AGCGCAGTCAAGATGAAAGCTAA AGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAA CTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGGCCAAGTCGCGCTTCTGGTACTTCCTGCGTCA CTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGT CTA CAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCG ACATCAAGCAG TTC CACAACCC GAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAGTGCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACCGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCTTTGAGCAAAGTTGAAACAAAAGGAGAGGTGAATAAAAGAAGGAGTATGGTGAAGATATACCGTATCGTCAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGGGG] [+] EMBL CNS09C83 [ GCTAATAGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAA CTGCCCTCGGAGAAGGAGAAGAACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGT GCCAAGTCGCGCTTCTGGTACTTCCTGCGTCA CTGCGTAAGTTCAAGAAGGCAACCGGCGAGATCGTCTCGGTGAAGCGCATCCTGGAGAAGACGCCGCTGAAGGTGAAGAACTTCGGCATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTGGCGGTGCCGTCACGCAGT CTACCAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCCAACATCAAGCAGCGGCGCACGGCACTGTTGGGAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAGTGCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCT ] [-] EMBL CNS09C84 [ ATCTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTGACCTGACCGTTTGCGGTGCCGTCACGCAGTGCTA CAGTGACATGGCCTCCCGTCACCGTGCCCGTGCCCACTCGATCCAGATCATCAAGGTGGAATCGATCGCCGCGTCCAAGACGCGCCGTGCGCACATCAAGCAGCGGCGCACGGCACTGTTGGGAAGACTGTCATCATACGCATCGCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAGTGCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGTGTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACCGGAAATACAGTTGCGGCCCCCCTTCTCTTTCCATCCA CCCAGGGGGGGAAGTCTTTGAGCAAAGTTGAAACAAAAGGAGAGGTGAATAAAAGAAGGAGTAT GTGA ] consensusID : consensus_8928#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 739 fasta sequence [CAGGTTAACAGATTTNTTCAAAATACAAGTTAACAGTTTATTAGAACAAAAGATGTNTACGTTGGCGGCTTCATTTTATTATCATATTACTTACATTATGTTACTGTGCTGGTTATGTTTCAGGATACCAATTGCTCTCCTGTGCTGGTATTGGTTGCCAACGGAGTGATATCACGATTAATTTTCCCGGAGCAAAACNAACAACAATCGAGTATTCAGCATTAGTCAGTAGCTCTGGTAACAATAATCCATCTATGTTCGATTGGATAGGAGGCAACGGCGCCAACAAAGCACCTACAATATTGCTGGGAAAATCGAATGAGCCTGCAATGCCACCCAGCTTGCCAAAAGATTCACAGTGCTGAAGATGATGATACCTTACCTTCAAATCGCCAAACCNGTATGGGGAAAACACGGATTTAAACGACATTCGCAAGTAACTGATGGAATTTTTCCCTTTGTATCGACTGGCTCCCCGACAACATTGNCGAACGTTACAACCATATCCGGGNCCATACACGCCTTAACGTTATTGCNCAGCACCTGGTTATGATACTATATATACNGACCTGCTTTCAAAACATTATTAAGAAACCTGGAATGCCTTCGTCCAAATAGAATGTGCACCACGTAATAAGTCTCATGCGTTGTCAATGCACTTTTAATTACCTNTGCAATAATATATTACCNNTACAGTAAGGTCGAACATGGTCCCTTATCTGGAACTTTACTTAGNCAT] [+] EMBL AL929892 [CAGGTTAACAGATTTNTTCAAAATACAAGTTAACAGTTTATTAGAACAAAAGATGTNTACGTTGGCGGCTTCATTTTATTATCATATTACTTACATTATGTTACTGTGCTGGTTATGTTTCAGGATACCAATTGCTCTCCTGTGCTGGTATTGGTTGCCAACGGAGTGATATCACGATTAATTTTCCCGGAGCAAAACNAACAACAATCGAGTATTCAGCATTAGTCAGTAGCTCTGGTAACAATAATCCATCTATGTTCGATTGGATAGGAGGCAACGGCGCCAACAAAGCACCTACAATATTGCTGGGAAAATCGAATGAGCCTGCAATGCCACCCAGCTTGCCAAAAGATTCACAGTGCTGAAGATGATGATACCTTACCTTCAAATCGCCAAACCNGTATGGGGAAAACACGGATTTAAACGACATTCGCAAGTAACTGATGGAATTTTTCCCTTTGTATCGACTGGCTCCCCGACAACATTGNCGAACGTTACAACCATATCCGGGNCCATACACGCCTTAACGTTATTGCNCAGCACCTGGTTATGATACTATATATACNGACCTGCTTTCAAAACATTATTAAGAAACCTGGAATGCCTTCGTCCAAATAGAATGTGCACCACGTAATAAGTCTCATGCGTTGTCAATGCACTTTTAATTACCTNTGCAATAATATATTACCNNTACAGTAAGGTCGAACATGGTCCCTTATCTGGAACTTTACTTAGNCAT] consensusID : consensus_8928#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 736 fasta sequence [CCGCCCACGCGTCCGGGGTGCTTACGGCCGCTCACTGCACCGCCGGTGCCTCGACCTCCAGCTTGACCGTGCGCCTGGGAACATCGCGTCACGCTTCGGGAGGAACCGTGGTTCGTGTTGCTCGCGTCGTGCAGCATCCCAAATACGATAGCAGCAGCATCGATTTCGACTACTCCCTGCTGGAGCTGGAAGACGAACTTACCTTCAGCGATGCGGTGCAGCCGGTTGGTCTGCCGAAACAGGACGAATCGGTGAAGGATGGAACCATGACGACTGTGTCTGGCTGGGGCAACACCCAGAGTGCGGCCGAATCGAATGCCGTTCTGCGGGCTGCCAACGTGCCGACCGTTAACCAAAAGGAGTGCAACAAAGCCTACAGTGACTTCGGAGGTGTTACCGATCGTATGCTGTGTGCCGGATACCAGCAGGGCGGAAAGGACGCTTGCCAGGGAGACTCCGGTGGTCCGCTGGTTGCTGATGGCAAGCTGGTTGGTGTGGTTTCGTGGGGCTACGGTTGCGCTCAGGCCGGTTATCCGGGAGTGTACTCGCGGGTTGCAGTCGTCCGCGACTGGGTGCGCGAGAACAGTGGAGTTTAAAACGGATCTCGGCTTCAAAACGGTACTGGATTTT-GGATTTAAACGAAAGTCATCGCTACAACAGAACAAATAAAAGAACATTAATCAAAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCA] [+] EMBL BM600831 [CCGCCCACGCGTCCGGGGTGCTTACGGCCGCTCACTGCACCGCCGGTGCCTCGACCTCCAGCTTGACCGTGCGCCTGGGAACATCGCGTCACGCTTCGGGAGGAACCGTGGTTCGTGTTGCTCGCGTCGTGCAGCATCCCAAATACGATAGCAGCAGCATCGATTTCGACTACTCCCTGCTGGAGCTGGAAGACGAACTTACCTTCAGCGATGCGGTGCAGCCGGTTGGTCTGCCGAAACAGGACGAATCGGTGAAGGATGGAACCATGACGACTGTGTCTGGCTGGGGCAACACCCAGAGTGCGGCCGAATCGAATGCCGTTCTGCGGGCTGCCAACGTGCCGACCGTTAACCAAAAGGAGTGCAACAAAGCCTACAGTGACTTCGGAGGTGTTACCGATCGTATGCTGTGTGCCGGATACCAGCAGGGCGGAAAGGACGCTTGCCAGGGAGACTCCGGTGGTCCGCTGGTTGCTGATGGCAAGCTGGTTGGTGTGGTTTCGTGGGGCTACGGTTGCGCTCAGGCCGGTTATCCGGGAGTGTACTCGCGGGTTGCAGTCGTCCGCGACTGGGTGCGCGAGAACAGTGGAGTTTAAAACGGATCTCGGCTTCAAAACGGTACTGGATTTT GGATTTAAACGAAAGTCATCGCTACAACAGAACA ] [+] EMBL CNS09FQS [ cCGGCCGCTCACTGCACCGCCGGTG CTCGACCTCCAGCTTGACCGTGCGCCTGGGAACATCGCGTCACGCTTCGGGAGGAACCGTGGTGCGCGTTGCTCGCGTCGTGCAGCATCCCAAATACGATAGCAGCAGCATCGATTTCGACTACTCCTTGCTGGAGCTGGAAGACGAACTTACCTTCAGCGATGCGGTGCAGCCGGTTGGTCTGCCGAAACAGGACGAAACGGTGAAGGATGGAACCATGACGACTGTGTCTGGCTGGGGCAACACCCAGAGTGCCGCCGAATCCAATGCCGTTCTGCGGGCTGCCAACGTGCCGACCGTTAACCAGAAGGAATGCAACAAAGCCTACAGTGACTTCGGAGGTGTCACCGATCGTATGCTGTGTGCCGGATACCAGCAGGGCGGAAAGGACGCTTGCCAGGGAGACTCCGGTGGTCCGCTGGTTGCTGATGGCAAGCTGGTTGGTGTGGTTTCGTGGGGCTACGGTTGCGCTCAGGCCGGTTATCCGGGAGTGTACTCGCGGGTTGCAGTTGTCCGCGACTGGGTGCGCGAGAACAGTGGAGTTTAAAACGGATCTCGGCTTCAAAATGGTACTGAATTTTGGGATTCAAACGAAAGCCATCGCTACAACAGAACAAATAAAAGAACATTAATCAAAACGCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCA] consensusID : consensus_8928#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 703 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGGTAGCATTGTACACCAACGGCAAGAAGTGTACCTGATGTATGCCACAAAATTGTATCAAATGGTAGCAAAAGAGTGAAGACTCAATAATACAAACAATGATGGACCACTTGTCGATCGTTACGGGTAGTTTCGCTTACCGTCTGTTTTGAAAACACTTGGCTTCCCGATTGCCCTGCCGCACAGGAATTCCGCCGGATGTCCGCATTCAGCAATATTACACCATATAGAAGGATGGAAAGGAAATAAACAACCAGCAGCCACCAGTTACTGCTGCAGCTATCTTCACCACTGAAACCCAATGCGTGTATGCGCTTGCAACGCGTCAACGGAACTTCAATCTCCTCATATTCCCGCAATAGGGAGCGAAAAGCGTTCACTACTCATTGTCCAAAGCTCTAATGTGTACACTATTTTGCCTTAGTCGTGTGGCGCACTTCCATTGTATGGTATTATGGCATTTCTGTCTCCACCAACAGCTTTTGTTCAGATGAGAAAAGAAAACACGTTGCTGTGGTGCTGGTGGATGATGTGAAAGGTATACAACTGATTGCATTTAATTGCGATGCACATCTCATAAACAAAAATACATCATAATAATAATACTGGTTGGTGTGCCTTAACACACAATTCTCGATCACAACCAGCTTCGAGACGCGCGCAGTTATATTATCATTT] [+] EMBL BM623402 [CCGCGGACGCGTGGGCGGACGCGTGGGGTAGCATTGTACACCAACGGCAAGAAGTGTACCTGATGTATGCCACAAAATTGTATCAAATGGTAGCAAAAGAGTGAAGACTCAATAATACAAACAATGATGGACCACTTGTCGATCGTTACGGGTAGTTTCGCTTACCGTCTGTTTTGAAAACACTTGGCTTCCCGATTGCCCTGCCGCACAGGAATTCCGCCGGATGTCCGCATTCAGCAATATTACACCATATAGAAGGATGGAAAGGAAATAAACAACCAGCAGCCACCAGTTACTGCTGCAGCTATCTTCACCACTGAAACCCAATGCGTGTATGCGCTTGCAACGCGTCAACGGAACTTCAATCTCCTCATATTCCCGCAATAGGGAGCGAAAAGCGTTCACTACTCATTGTCCAAAGCTCTAATGTGTACACTATTTTGCCTTAGTCGTGTGGCGCACTTCCATTGTATGGTATTATGGCATTTCTGTCTCCACCAACAGCTTTTGTTCAGATGAGAAAAGAAAACACGTTGCTGTGGTGCTGGTGGATGATGTGAAAGGTATACAACTGATTGCATTTAATTGCGATGCACATCTCATAAACAAAAATACATCATAATAATAATACTGGTTGGTGTGCCTTAACACACAATTCTCGATCACAACCAGCTTCGAGACGCGCGCAGTTATATTATCATTT] consensusID : consensus_8928#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence [CCGCCCACGCGTCCGCTTCAGCCAGTACAACAAGAACCACAAGTACCAGAACGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACCACCCGCATCGCCAAGCTGCTGAACATCGATCCCGAGGAGGCTGAGGAGCTGGAGGGTCAGTTCATGTTCCAGATCTTCAACGGAGAGCGCTTCTTCGCCTTCAACAACCAGACCATTGAGCAGTTCCCGAGCCTTGTGAAGAAGTACTTCGAGGACTTCGAGGATGGTTTCGCCTACAACATGACCAAGTTCTATCAGCAGAACGTTGTCACCATGGCCTTCCATGGCTGGCCACCGGTCTGCCATTCCACTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCAAGACCCCCACTGGATACCCCGAGAAGGAGGAGGAAATGCTGCTACACCCACGCCAAATCACATCCAACCGACAGAACAAACGCCGCCCCCTTCCATCTCTTACCAAGGGTGCCTCTCCAGTGTAACAATAATGACGACAAGCGCGGGTGTGCGATGGGGCGAGGGGCGCTATTTTCTTCTGCATTAGATGCTAACGCGTGTAGTTCCTATTGGTGGATTGAGGTAAAAGAAC] [+] EMBL BM579326 [CCGCCCACGCGTCCGCTTCAGCCAGTACAACAAGAACCACAAGTACCAGAACGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACCACCCGCATCGCCAAGCTGCTGAACAT ] [+] EMBL BX610440 [ AAGAACCACAAGTACCAGAACGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACCACCCGCATCGCCAAGCTGCTGAACATCGATCCCGAGGAGGCTGAGGAGCTGGAGGGTCAGTTCATGTTCCAGATCTTCAACGGAGAGCGCTTCTTCGCCTTCAACAACCAGACCATTGAGCAGTTCCCGAGCCTTGTGAAGAAGTACTTCGAGGACTTCGAGGATGGTTTCGCCTACAACATGACCAAGTTCTATCAGCAGAACGTTGTCACCATGGCCTTCCATGGCTGGCCACCGGTCTGCCATTCCACTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCAAGACCCCCACTGGATACCCCGAGAAGGAGGAGGAAATGCTGCTACACCCACGCCAAATCACATCCAACCGACAGAACAAACGCCGCCCCCTTCCATCTCTTACCAAGGGTGCCTCTCCAGTGTAACAATAATGACGACAAGCGCGGGTGTGCGATGGGGCGAGGGGCGCTATTTTCTTCTGCATTAGATGCTAACGCGTGTAGTTCCTATTGGTGGATTGAGGTAAAAGAAC] consensusID : consensus_8928#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 521 fasta sequence [GCAAGAATCCCCCGAGGTTTCGAGGATTTGAGTGAAAGCGCTCAGCTAGCACCTGTCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAACCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACTGACCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCCACCAAGGACAGCGAGGCAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCCGCCTGACCCGCAAGGTCCAGCAGGTTGAGGAGGATCTGGAAAAGTCTGAGGAACGTTCGTCCGCCGCGCTGTCCAAGCTGCTGGAAGCTACCCAGTCGGCTGATGAGAACAACCGTATGTGCAAAGTGTTGGAGAACC] [+] EMBL AL694480 [GCAAGAATCCCCCGAGGTTTCGAGGATTTGAGTGAAAGCGCTCAGCTAGCACCTGTCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTGTGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAGGCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCGAGAACCAGGCGAAGGAGGCGAACCTGCGCGCCGACAAGATCATGGAGGAGGTCGCCGACTGACCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGGCCACCAAGGACAGCGAGGCAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCCGCCTGACCCGCAAGGTCCAGCAGGTTGAGGAGGATCTGGAAAAGTCTGAGGAACGTTCGTCCGCCGCGCTGTCCAAGCTGCTGGAAGCTACCCAGTCGGCTGATGAGAACAACCGTATGTGCAAAGTGTTGGAGAACC] consensusID : consensus_8928#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 385 fasta sequence [CCGCCCACGCGTCCGCAAATTGCAAGGTTGTGGTTTGTTGTGTTTTACATAAATGTTTGTTTTTATTTTGTGTTGCTGCAGCTGCTGCTGCTGTCTTTTGTTTCGTTTTCTCTCTCTATCTCTCTCTCACTCTTTCTCTCTCTCTCTCTTTCTCGCTCTTTCTCTCTTTCTCTTTCTATCTCTCTCTTTCTCTCTTTCTCTCTCTCTCGCTCTCACTGATACCTTCCTATGATACAGCCCAATGCATTATCGATGATCGTACATGTTACTTCGTTCATTCTGTTCTTCGTTTGTGTATTTTTGCGTGAGTGTCGGTGTGTGTGTGTCAGGTTAAAAAAGGCGAAGTTCGTCGTTTTAAGTAGTATTTAGCTTTAAGTTTACAAAG] [+] EMBL BM606863 [CCGCCCACGCGTCCGCAAATTGCAAGGTTGTGGTTTGTTGTGTTTTACATAAATGTTTGTTTTTATTTTGTGTTGCTGCAGCTGCTGCTGCTGTCTTTTGTTTCGTTTTCTCTCTCTATCTCTCTCTCACTCTTTCTCTCTCTCTCTCTTTCTCGCTCTTTCTCTCTTTCTCTTTCTATCTCTCTCTTTCTCTCTTTCTCTCTCTCTCGCTCTCACTGATACCTTCCTATGATACAGCCCAATGCATTATCGATGATCGTACATGTTACTTCGTTCATTCTGTTCTTCGTTTGTGTATTTTTGCGTGAGTGTCGGTGTGTGTGTGTCAGGTTAAAAAAGGCGAAGTTCGTCGTTTTAAGTAGTATTTAGCTTTAAGTTTACAAAG] consensusID : consensus_8928#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 113 fasta sequence [GGGCACGGAGATCGGCGCCGATCATCTCGGTGAGGAATGGAAGGGTGTGCTGACGAACACTCGTGTCCGCTCTGCTCCTGAAGAAGGGCGCCACTCGTGCTACCGCCCGCGCC] [+] EMBL CNS090TR [GGGCACGGAGATCGGCGCCGATCATCTCGGTGAGGAATGGAAGGGTGTGCTGACGAACACTCGTGTCCGCTCTGCTCCTGAAGAAGGGCGCCACTCGTGCTACCGCCCGCGCC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8928#5 ----------------------------GCAAGAATCCCCCGAGGTTTCGAGGATTTGAG 32 consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 CTGTTGGCCCACTGGCTTTTTTCCGTTTCCTCTTTAACGAAGCGCAGTCAAGATGAAAGC 60 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 ---CAGGTTAACAGATTTNTTCAAAATACAAGTTAACAGTTTATTAGAACAAAAGATGTN 57 consensus_8928#2 ----------CCGCCCACGCGTCCGGGGTGCTTACGGCCGCTCACTGCACCGCCGGTGCC 50 consensus_8928#3 ---------------------CCGCGGACGCGTGGGCGGACGCGTGGGGTAGCATTGTAC 39 consensus_8928#4 -----------CCGCCCACGCGTCCGCTTCAGCCAGTACAACAAGAACCACAAGTACCAG 49 consensus_8928#5 TGAAAGCGCTCAGCTAGCACCTGTCAAAAAGGAAAGCTCCTGTTCCTGTTTCATTTTCTG 92 consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 TAAAGGAGTGCTGAAAGAATACCAGGTGATCGGGCGCAACTGCCCTCGGAGAAGGAGAAG 120 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 TACGTTGGCGGCTTCATTTTATTATCATATTACTTACATTATGTTACTGTGCTGGTTATG 117 consensus_8928#2 TCGACCTCCAGCTTGACCGTGCGCCTGGGAACATCGCGTCACGCTTCGGGAGGAACCGTG 110 consensus_8928#3 ACCAACGGCAAGAAGTGTACCTGATGTATGCCACAAAATTGTATCAAATGGTAGCAAAAG 99 consensus_8928#4 AACGATTACTACGAGCAGTTCGGAAACAAGAACCAGGAGGAGTTCCAGAAGTGGTCCACC 109 consensus_8928#5 TGGCCCGCGGTTAGCTAAAACAAACCATCCAAAATGGACGCGATCAAGAAGAAAATGCAG 152 consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 AACCCTCCGCTCTTCAAGATGCACATCTTCGCCCCGGACCACATCGTGGCCAAGTCGC-- 178 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 TTTCAGGATACCAATTGCTCTCCTGTGCTGGTATTGGTTGCCAACGGAGTGATATCACGA 177 consensus_8928#2 GTTCGTGTTGCTCGCGTCGTGCAGCATCCCAAATACGATAGCAGCAGCATCGATTTCGAC 170 consensus_8928#3 AGTGAAGACTCAATAATACAAACAATGATGGACCACTTGTCGATCGTTACGGGTAGTTTC 159 consensus_8928#4 ACCCGCATCGCCAAGCTGCTGAACATCGATCCCGAGGAGGCTGAGGAGCTGGAGGGTCAG 169 consensus_8928#5 GCGATGAAGATCGAGAAGGATAACGCGCAGGACAAAGCCGACACCTGCG--AGAACCAGG 210 consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 GCTTCTGGTACTTCCTGCGTCACTGCGTAAGTTCAAGAAGGCAACCGGC--GAGATCGTC 236 consensus_8928#6 ----------CCGCCCACGCGTCCGCAAATTGCAAGGTTGTGGTTTGTT--GTGTTTTAC 48 consensus_8928#1 TTAATTTTCCCGGAGCAAAACNAACAACAATCGAGTATTCAGCATTAGTCAGTAGCTCTG 237 consensus_8928#2 TACTCCCTGCTGGAGCTGGAAGACGAACTTACCTTCAGCGATGCGGTGCAGCCGGTTGGT 230 consensus_8928#3 GCTTACCGTCTGTTTTGAAAACACTTGGCTTCCCGATTGCCCTGCCGCACAGGAATTCCG 219 consensus_8928#4 TTCATGTTCCAGATCTTCAACGGAGAGCGCTTCTTCGCCTTCAACAACCAGACCATTGAG 229 consensus_8928#5 CGAAGGAGGCGAACCTGCGC-------GCCGACAAGATCATGGAGGAGGTCGCCGACTGA 263 consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 TCGGTGAAGCGCATCCTGGA-------GAAGACGCCGCTGAAGGTGAAGAACTTCGGCAT 289 consensus_8928#6 ATAAATGTTTGTTTTTATTT-------TGTGTTGCTGCAGCTGCTGCTGCTGTCTTTTGT 101 consensus_8928#1 GTAACAATAATCCATCTATG-------TTCGATTGGATAGGAGGCAACGGCGCCAACAAA 290 consensus_8928#2 CTGCCGAAACAGGACGAATC-------GGTGAAGGATGGAACCATGACGACTGTGTCTGG 283 consensus_8928#3 CCGGATGTCCGCATTCAGCAA------TATTACACCATATAGAAGGATGGAAAGGAAATA 273 consensus_8928#4 CAGTTCCCGAGCCTTGTGAAGAAGTACTTCGAGGACTTCGAGGATGGTTTCGCCTACAAC 289 consensus_8928#5 CCAAGCGTCTGGAGCAGGTCACCCAGGACCATGAGAAGTTCAAGGCTAGCTTGGAGCAGG 323 consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 CTGGTTGCGTTACGATTCGCGCTCCGGTACGCACAACATGTACCGCGAGTACCGTG-ACC 348 consensus_8928#6 TTCGTTTTCTCTCTCTATCTCTCTCTCACTCTTTCTCTCTCTCTCTCTTTCTCGCTCTTT 161 consensus_8928#1 GCACCTACAATATTGCTGGGAAAATCGAATGAGCCTGCAATGCCACCCAGCTTGCCAAAA 350 consensus_8928#2 CTGGGGCAACACCCAGAGTGCGGCCGAATCGAATGCCGTTCTGCGGGCTGCCAACGTGCC 343 consensus_8928#3 AACAACCAGCAGCCACCAGTTACTGCTGCAGCTATCTTCACCACTGAAACCCAATGCGTG 333 consensus_8928#4 ATGACCAAGTTCTATCAGCAGAACGTTGTCACCATGGCCTTCCATGGCTGGCCACCGGTC 349 consensus_8928#5 CCACCAAGGACAGCGAGGCAGAAGGACAAGCTGCTCACCTCGACCGAGGCGAACGTGGCC 383 consensus_8928#7 -------------------------------------------------------GGGCA 5 consensus_8928#0 TGACCGTTGGCGGTGCCGTCACGCAGTGCTACAGTGACATGGCCTCCCGTCACCGTGCCC 408 consensus_8928#6 CTCTCTTTCTCTTTCTATCTCTCTCTTTCTCTCTTTCTCTCTCTCTCGCTCTCACTGATA 221 consensus_8928#1 GATTCACAGTGCTGAAGATGATGATACCTTACCTTCAAATCGCCAAACCNGTATGGGGAA 410 consensus_8928#2 GACCGTTAACCAAAAGGAGTGCAACAAAGCCTACAGTGACTTCGGAGGTGTTACCGATCG 403 consensus_8928#3 TATGCGCTTGCAACGCGTCAACGGAACTTCAATCTCCTCATATTCCCGCAATAGGGAGCG 393 consensus_8928#4 TGCCATTCCACTACA-GCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCT 408 consensus_8928#5 G--CCTGACCCGC-AAGGTCCAGCAGGTTGAGGAGGATC-------TGGAAAAGTCTGAG 433 consensus_8928#7 C--GGAGATCGGC-GCCGATCATCTCGGTGAGGAATGGA-------AGGGTGTG-CTGAC 54 consensus_8928#0 GTGCCCACTCGAT-CCAGATCATCAAGGTG--GAATCGA-------TCGCCGCGTCCAAG 458 consensus_8928#6 C------CTTCCT-ATGATACAGCCCAATGCATTATCGA-------TGATCGTACATGTT 267 consensus_8928#1 AACACGGATTTAA-ACGACATTCGCAAGTAACTGATGGAATT----TTTCCCTTTGTATC 465 consensus_8928#2 TATGCTGTGTGCC-GGATACCAGCAGGGCGGAAAGGACGCTTGCC-AGGGAGACTCCGGT 461 consensus_8928#3 AAAAGCGTTCACT-ACTCATTGTCCAAAGCTCTAATGTGTACACT-ATTTTGCCTTAGTC 451 consensus_8928#4 GCCACCACCTACCCGAGCATTTTCAAGACCCCCACTGGATACCCCGAGAAGGAGGAGGAA 468 consensus_8928#5 GAA-CGTT---CGT--CCGCCGCGCTGTCCAA------GCTGCTGGAAGCTACCCAGTCG 481 consensus_8928#7 GAA-CACT---CGT--GT-CCGCTCTGCTCCT------GAAGAAGGGCGCCACTCGTGCT 101 consensus_8928#0 ACG-CGCCGTGCGC--ACATCAAGCAGTTCCACAACCCGAAGACTGTCATCATACGCATC 515 consensus_8928#6 ACTTCGTTCATTCT--GTTCTTCGTTTGTGTATTTTTGCGTGAGTGTCGGTGTGTGTGTG 325 consensus_8928#1 GACTGGCTCCCCGA--CAACATTGNCGAACGTTACAACCATATCCGGGNCCATACACGCC 523 consensus_8928#2 GGTCCGCTGGTTGCTGATGGCAAGCTGGTTGGTGTGGTTTCGTGGGGCTACGGTTGCGCT 521 consensus_8928#3 GTGTGGCGCACTTCCATTGTATGGTATTATGGCATTTCTGTCTCCACCAACAGCTTTTGT 511 consensus_8928#4 ATGCTGCTACACCC--ACGCCAAATCACATCCAACCGACAGAACAAACGCCGCCCCCTTC 526 consensus_8928#5 GCTGATG--AGAACAACCGTATGTGCAAAGTGTTGGAGAACC------------------ 521 consensus_8928#7 ACCGCCC--GCGCC---------------------------------------------- 113 consensus_8928#0 GCCGCCGCAGCGCCACGGATTCGTCCGCATCAGCCGCGTTGTGTTCGCGTTTGGAGTGAG 575 consensus_8928#6 TCAGGTTAAAAAAGGCGAAGTTCGTCGTTTTAAGTAGTATTTAGCTTTAAGTTTACAAAG 385 consensus_8928#1 TTAACGTTATTGCNCAGCACCTGGTTATGATACTATATATACNGACCTGCTTTCAAAACA 583 consensus_8928#2 CAGGCCGGTTATCCGGGAGTGTACTCGCGGGTTGCAGTCGTCCGCGACTGGGTGCGCGAG 581 consensus_8928#3 TCAGATGAGAAAAGAAAACACGTTGCTGTGGTGCTGGTGGATGATGTGAAAGGTATACAA 571 consensus_8928#4 CATCTCT---TACCAAGGGTGCCTCTCCAGTGTAACAATAATGACGACAAGCGCGGGTGT 583 consensus_8928#5 ------------------------------------------------------------ consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 TGCTGCTGCTGCGTGTGCACGATCGGTTGTTGTTGTGGTGGTGCGTGTTTACGGTGCGGT 635 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 TTATTAAGAAACCTGGAATGCCTTCGTCCAAATAGAATGTGCACCACGTAATAAGTCTCA 643 consensus_8928#2 AACAGTGGAGTTTAAAACGGATCTCGGCTTCAAAACGGTACTGGATTTTGGATTTAAACG 641 consensus_8928#3 CTGATTGCATTTAATTGCGATGCACATCTCATAAACAAAAATACATCATAATAATAATAC 631 consensus_8928#4 GCGATGGGGCGAGGGGCGCTATTTTCTTCTGCATTAGATGCTAACGCGTGTAGTTCCTAT 643 consensus_8928#5 ------------------------------------------------------------ consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 GTGATGATGATGCTGTGTGTATTCCTCTGGTTGAAGTGTTAATTTGCACCGGAAATACAG 695 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 TGCGTTGTCAATGCACTTTTAATTACCTNTGCAATAATATATTACCNNTACAGTAAGGTC 703 consensus_8928#2 AAAGTCATCGCTACAACAGAACAAATAAAAGAACATTAATCAAAACGCAAAAAAAAAAAA 701 consensus_8928#3 TGGTTGGTGTGCCTTAACACACAATTCTCGATCACAACCAGCTTCGAGACGCGCGCAGTT 691 consensus_8928#4 TGGTGGATTGAGGTAAAAGAAC-------------------------------------- 665 consensus_8928#5 ------------------------------------------------------------ consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 TTGCGGCCCCCCTTCTCTTTCCATCCACCCCAGGGGGGGAAGTCTTTGAGCAAAGTTGAA 755 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 GAACATGGTCCCTTATCTGGAACTTTACTTAGNCAT------------------------ 739 consensus_8928#2 AAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCCCA------------------------- 736 consensus_8928#3 ATATTATCATTT------------------------------------------------ 703 consensus_8928#4 ------------------------------------------------------------ consensus_8928#5 ------------------------------------------------------------ consensus_8928#7 ------------------------------------------------------------ consensus_8928#0 ACAAAAGGAGAGGTGAATAAAAGAAGGAGTATGGTGAAGATATACCGTATCGTCAAAAAA 815 consensus_8928#6 ------------------------------------------------------------ consensus_8928#1 ------------------------------------------------------------ consensus_8928#2 ------------------------------------------------------------ consensus_8928#3 ------------------------------------------------------------ consensus_8928#4 ------------------------------------------------------------ consensus_8928#5 ------------------------------------ consensus_8928#7 ------------------------------------ consensus_8928#0 AAAAAAAAAAAAAGGCCACATGTGCCCGAGCTGGGG 851 consensus_8928#6 ------------------------------------ consensus_8928#1 ------------------------------------ consensus_8928#2 ------------------------------------ consensus_8928#3 ------------------------------------ consensus_8928#4 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||