These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8938#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 8 consensus length = 2824 fasta sequence [CCGGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCACACATTCGCTGCCTCCGGGACATTAAAATTCGCAGTGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCCAGAGATCGTGCTGGGGGATATTCGTTCTTATCCGATCAGTTTGGGTAATTTTTTGAAAGTTTTTGGGGATTTTTATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACTTTCGATGTTTGTTGTGAGTGTGTGAGGTGTGAAAGTGTGTGAAAAGTTGAAATAATTATCAAAAAACCAAGCAAAACCGAGTCATCTTTACAGAAGAAATAACGCGTGAAGCTGATTAGAGTGATATTTGGCTGAAAAGTTAGTTAAAGTGAATAATAAATACGTGGAACAAGAGAGTATTATTTCCAATTCCGGATGATACTAATTACATAGAGATTTATGAATTTCTTATTTTACTGAAATTTTGAAACAATAATTCAAAAATTTCCCTCAACCAGTACGTGTTGAGCTTCACCGACAGCAACACATTTGTTGAGAGAGAATCTAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGACTGCACCGTATCCTGCAGCGCACTTCAGCGGTGGTGGTGGTGACAAGAATTGCTTCAAAAATTTCAACGATTCTTATTGGAAGTGAAATCGACTACATGTTGGCGACAACCGCCAACAGTGACATGGCGCCGCCAGACGGGCCCATGCAGTACGACTCGAAATGGTCACCGATGAACATTATCAGCATGCCGACCAAGATCAAGCAAGAGGGCTTCAACGTATTAAGTCATCTAGACGTGTACCACCCGCTTGCAGTATCGCTCCCAGCGTACGATCAGGTGAAATCTTCATCGCCCTCCTCCCTGCAGCAACTGCCGACCGTGATCGAGCGGCTGCACGAGGAAACGGGAAGCTCACCCGACCATCAACATCAGCATCTTGCACAGCAGCAGCACCAG------CACCAGCA--A-CAACACCAGCAGCAGCAACACCAGCAGCAGCACCAGCAACAACAACTGCATCATAACATCGGTTCGTTGGCGCTATCATCCTCCAAACCGTCCAGCCAGGGTCCGGATGAGCTGCCGAGCAATAGCTTAGCACCGGATGATCTGCACGGTGGCCAGATACCGACAACGCTTCCCCAACCCAACTCCACTAACAACAATAACAACAACCACACACCAAACCAGAATCAGACCACTAGCAACCAGAGCTCCACAAACTCTACCACCAGCAATGGTGGAGCATCGACGGTCAGCAACAGCAGTACGACTAACAGCAGCAGTCTATCCACATACGATTGCAGCTCCACCACAAGTCCGACGGGCAGCCGGAACTCGAATGTGAAGCCACCGTACAGCTATGTGGCGTTAATTGCAATGGCGATACAGAGCTCACAGATGAAGCGTGCAAGTTTGAGTGAAATCTACGGTTACATCACCTCCCGGTTTCCGTACTACGAGAAGAACAAGAAGGGCTGGCAGAACTCGATCCGCCACAATCTCAGCCTGAACGAGTGCTTCGTGAAGATTCCGCGGGAGGGCGGTGGCGAGCGGAAGGGCAACTACTGGACGCTTGACCCGCAGTACGAGGACATGTTCGAGAATGGCAACTACAAGCGTCGCCGACGGATGAAGCGCCCGTACCGGACTGGACACTACTCGAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGCCATCGGCCGGTGTTTGCGCAGAATCCCTATCAGACCTATCCACGCTACGATGCCGGCGCACCCTGGATGCCGACGACGCAGCTGAGCAGCTACACGTCCTGCTCGAGCCGTACTAACTACACCTACTCAGCACCGTATAATTTTTCGCAGCTCCAACAGTCGGTACAACCGGTAACGATCAACACGTACGGTTCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACAACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCTTTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAACTCCTACCAGAAGTCGTACCTGTCCCAACCTTAACGGCTAATCGGTAACGTCGGTGACGTTCTCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCTACCAGCAACAACGACAACTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAGTAAGGTAGCTAGACGCGCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTACTGAACAGACACGATCACTCAAAGTAGGAAAACAGTAGCAAGTAAATGCTATTGTTGTTTATGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGGTCTCTTCTTAGGTACCATTTATTTGTCTAACGCCTTTCAGATAGATGCATATAAGCTCGTCTCTCTTCCGAAACGGAAAATGATAGCTCTCCGAGGCAAATAGTTTGATAGCTTTGTTTAGATCATTTGATCTGTTTTCTTTGTATTTATTAACTCGTAACACAAATCGATGCTACTATCTGTATCCTCCAGCAAAGCAAGATGCTAACTGTACCAAACCAAACTCAAACTCCGCAGACACATTGGAGGCTCGGATCTGAAGACAAGGGAAGCATGAAATTTACCGTCCAAAATTTGCTAATGCATAGAGTCGAAAGTTATAACGAGGCATT] [+] EMBL BM632526 [CCGGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCACACATTCGCTGCCTCCGGGACATTAAAATTCGCAGTGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCCAGAGATCGTGCTGGGGGATATTCGTTCTTATCCGATCAGTTTGGGTAATTTTTTGAAAGTTTTTGGGGATTTTTATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACTTTCGATGTTTGTTGTGAGTGTGTGAGGTGTGAAAGTGTGTGAAAAGTTGAAATAATTATCAAAAAACCAAGCAAAACCGAGTCATCTTTACAGAAGAAATAACGCGTGAAGCTGATTAGAGTGATATTTGGCTGAAAAGTTAGTTAAAGTGAATAATAAATACGTGGAACAAGAGAGTATTATTTCCAATTCCGGATGATACTAATTACATAGAGATTTATGAATTTCTTATTTTACTGAAATTTTGAAACAATAATTCAAAAATTTCCCTCAACCAGTACGTGTTGAGCTTCACCGACAGCAACACATTTGTTGAGAGAGAATCTAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACG ] [+] EMBL BM619032 [ ccgGAAATTTTGAAACAATAATTCAAAAATTTCCCTCAACCAGTACGTGTTGAGCTTCACCGACAGCAACACATTTGTTGAGAGAGAATCTAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGACTGCACCGTATCCTGCAGCGCACTTCAGCGGTGGTGGTGGTGACAAGAATTGCTTCAAAAATTTCAACGATTCTTATTGGAAGTGAAATCGACTACATGTTGGCGACAACCGCCAACAGTGACATGGCGCCGCCAGACGGGCCCATGCAGTACGACTCGAAATGGTCACCGATGAACATTATCAGCATGCCGACCAAGATCAAGCAAGAGGGCTTCAACGTATTAAGTCATCTAGACGTGTACCACCCGCTTGCAGTATCGCTCCCAGCGTACGATCAGGTGAAATCTTCATCGCCCTCCTCCCTGCAGCAACTGCCGACCGTGATCGAGCGGCTGCACGAGGAAACGGGAAGCTCACCCGACCATCAACATCAGCATCTTGCACAGCAGCAGCACCAG CACCAGCA A CAACACCAGCAGCAGCAACACCAGCAGCAGCACCAGCAACAACAACTGCATCATAACATCGGTTCGTTGGCGCTA ] [+] EMBL CNS08XNP [ GTGACATGGCGCCG CAGACGGGCCCATGCAGTA GACTCGAAATGGTCACCGATGAACATTATCAGCATGCCGACCAAGATCAAGCAAGAGGGCTTCAACGTATTAAGTCATCTAGACGTGTACCACCCGCTTGCAGTATCGCTCCCAGCGTACGATCAGGTGAAATCTTCATCGCCCTCCTCCCTGCAGCAGCTGCCGACCGTGATCGAGCGGCCGCACGAGGAAACGGGAAGCTCACCCGACCATCAACATCAGCATCTTGCACAGCAGCAGCACCAGCGGCAACACCAGCAGCAGCAACACCAGCAGCAGCAACACCAGCAG CAGCAACAACAACTGCATCATAACATCGGTTCGTTGGCGCTATCATCCTCCAAACCGTCCAGCCAGGGTCCGGATGAGCTGCCGAGCAATAGCTTAGCACCGGATGATCTGCACGGTGGCCAGATACCGACAACGCTTCCCCAACCCAACTCCACTAACAACAATAACAACAACCACACACCAAACCAGAATCAGACCACTAGCAACCAGAGCTCCACAAACTCTACCACCAGCAATGGTGGAGCATCGACGGTCAGCAACAGCAGTACGACTAACAGCAGCAGTCTATCCACATACGATTGCAGCTCCACCACAAGTCCGACGGGCAGCCGGAACTCGAATGTGAAGCCACCGTACAGCTATGTGGCGTTAATTGCAATGGCGATACAGAGCTCACAGATGAAGCGTGCAAGTTTGAGTGAAATCTACGGTTACATCACCTCCCGGTTTCCGTACTACGAGAAGAACAAGAAGGGCTGGCAGAACTCGATCCGCCACAATCTCAGCCTGAACGAGTGCTTCGTGAAGATTCCGCGGGAGGGCGGTGGCGAGCGGAAGGGCAACTACTGGACGCTTGACCCGCAGTACGAGGACATGTTCGAGAATGGAAA ] [+] EMBL BX606804 [ AAGATCCCGCGGGAGGGCGGTGGCGAGCGGAAGGGCAACTACTGGACGCTTGACCCGCAGTACGAGGACATGTTCGAGAATGGCAACTACAAGCGTCGCCGACGGATGAAGCGCCCGTACCGGACTGGACACTACTCGAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGCCATCGGCCGGTGTTTGCGCAGAAT ] [+] EMBL BM634336 [ ccgGGCGAGCGGAAGGGCAACTACTGGACGCTTGACCCGCAGTACGAGGACATGTTCGAGAATGGCAACTACAAGCGTCGCCGACGGATGAAGCGCCCGTACCGGACTGGACACTACTCGAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGCCATCGGCCGGTGTTTGCGCAGAATCCCTATCAGACCTATCCACGCTACGATGCCGGCGCACCCTGGATGCCGACGACGCAGCTGAGCAGCTACACGTCCTGCTCGAGCCGTACTAACTACACCTACTCAGCACCGTATAATTTTTCGCAGCTCCAACAGTCGGTACAACCGGTAACGATCAACACGTACGGTTCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACAACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCTTTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAACTCCTACCAGAAGTCGTACCTGTCCCAACCTTAACGGCTAATCGGTAACGTCGGTGACGTTCTCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCTACCAGCAACAACGACAACTTCATGCGTAACCT ] [+] EMBL BX602414 [ ACGTGACCAACCCGGGCAACTCTGGCCATCGGCCGGGGTTTGCGCAGAATCCCTATCAGACCTATCCACGCCACGATGCCGGCGCACCCTGGAAGCCGACAACGCAGCTGAGCAGCTACACGTCCGGCTCGAGCCGTACTAACTACACCTACTCAGCACCGTATAATTTTTCGCAGCCCCAACAGTCGGTACAACCGGTAACGATCAACACGTACGGAGCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACAACACCTCCCCGCGCACGGCGGTGCGAGCCACACTATCCCCATTGGGACACGACCTCACCTTTGCCGGTGGTTAAAGACG ] [+] EMBL BM589794 [ ccgCTAGACACTTTCGCCGTTTCGGGCAGCACAACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCTTTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAACTCCTACCAGAAGTCGTACCTGTCCCAACCTTAACGGCTAATCGGTAACGTCGGTGACGTTCTCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCTACCAGCAACAACGACAACTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAGTAAGGTAGCTAGACGCGCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTACTGAACAGACACGATCACTCAAAGTAGGAAAACAGTAGCAAGTAAATGCTATTGTTGTTTATGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGGTCTCTTCTTAGGTACCATTTATTTGTCTAACGCCTTTCAGATAGATGCATAT ] [+] EMBL BX628062 [ AACAACGACAACTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAGTAAGGTAGCTAGACGCGCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTACTGAACAGACACGATCACTCAAAGTAGGAAAACAGTAGCAAGTAAATGCTATTGTTGTTTATGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGTTCTCTTCTTAGGTACCATTTATTTGTCTAACGCCTTTCAGATAGATGCATATAAGCTCGTCTCTCTTCCGAAACGGAAAATGATAGCTCTCCGAGGCAAATAGTTTGATAGCTTTGTTTAGATCATTTGATCTGTTTTCTTTGTATTTATTAACTCGTAACACAAATCGATGCTACTATCTGTATCCTCCAGCAAAGCAAGATGCTAACTGTACCAAACCAAACTCAAACTCCGCAGACACATTGGAGGCTCGGATCTGAAGACAAGGGAAGCATGAAATTTACCGTCCAAAATTTGCTAATGCATAGAGTCGAAAGTTATAACGAGGCATT] consensusID : consensus_8938#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 823 fasta sequence [CCGCCCACGCGTCCGAGAACGTGTGTGCGTGTGCAACTGTTGTCGTTTGGCTGACGTGCGCGCACCCGGGGGATGGTAAAAGCGAAAAAGTGAACACGGCTCTCCGTTAGTAAGCGAACAGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCACACACTCGCTGCCTCCGGGACATTAAAATTCGCAGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCCAGAGATCGTGCTGGGGGATATTCGTTTGGGTAATTTTTTGAAAGTTTTGGGGGATTTTTATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACTTTCGATGTTTTTTTGTGAATGTGTGAGATGTGAAAGTGTGAGAAAAGTTGAAAGAATTATCGAAAAACCAAGCAAAACCGAGTCGTCTCAACAGAAAAAATAACGCGTGAAGCTGATTATAGTGATTTTTGGCTGAAAATTTAGTTAAAGTGAATAATAAATACGTGGAACAAAAGTGTACTATTACCAATTCCGGATGGTACTAATTACAAAGAGATTTATGAATTTCTTATATTGCTGAAATTTTGAAACAATAATTCAAAAATTT-CCCTCAACCAGTAC-G-TGGCGCTGGGATAAAGCTTTACCGACAGCAACACATTTGTTGAGAGAGAATTGAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGACTGCACCGTATCCTGCAGCGCACTTCAGCGGTGGTGGTGGTGACAACAATTGCTTCAAAAAT] [+] EMBL BM623840 [CCGCCCACGCGTCCGAGAACGTGTGTGCGTGTGCAACTGTTGTCGTTTGGCTGACGTGCGCGCACCCGGGGGATGGTAAAAGCGAAAAAGTGAACACGGCTCTCCGTTAGTAAGCGAACAGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCACACACTCGCTGCCTCCGGGACATTAAAATTCGCAGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCCAGAGATCGTGCTGGGGGATATTCGTTTGGGTAATTTTTTGAAAGTTTTGGGGGATTTTTATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACTTTCGATGTTTTTTTGAGAATGTGTGAGATGTGAAAGTGTGAGAAAAGTTGAAAGAATTATCGAAAAACCAAGCAAAACCGAGTCGTCTCAACAGAAAAAATAACGCGTGAAGCTGATTATAGTGATTTTTGGCTGAAAATTTAGTTAAAGTGAATAATAAATACGGGGAACAAAAGTGTACTATTACCAATTCCGGATGGTACTAATTACAAAGAGATTTATGAATTTCTTATATTGCTGAAATTTTGAAACAATAATTCAAAAATTTCCCCTCAACCAGT ] [+] EMBL BM618830 [ ccgcccacGCGTCCGGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCACACACTCGCTGCCTCCGGGACATTAAAATTCGCAGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCCAGAGATCGTGCTGGGGGATATTCGTTTGGGTAATTTTTTGAAAGTTTTGGGGGATTTTTATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACTTTCGATGTTTTTTTGTGAATGTGTGAGATGTGAAAGTGTGAGAAAAGTTGAAAGAATTATCGAAAAACCAAGCAAAACCGAGTCGTCTCAACAGAAAAAATAACGCGTGAAGCTGATTATAGTGATTTTTGGCTGAAAATTTAGTTAAAGTGAATAATAAATACGTGGAACAAAAGTGTACTATTACCAATTCCGGATGGTACTAATTACAAAGAGATTTATGAATTTCTTATATTGCTGAAATTTTGAAACAATAATTCAAAAATTT CCCTCAACCAGTAC G TGGCGCTGGGATAAAGCTTTACCGACAGCAACACATTTGTTGAGAGAGAATTGAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGACTGCACCGTATCC ] [+] EMBL BM656723 [ ccgCAGTTTTCGTTAAGTAAACAACCAACTTCGGTTCGCGCGCGCACACACTCGCTGCCTTCGGGACATTAAAATACGCA GTGTCCAAAAGGGAGCAGATCCGGTACGCAGCGATCGTGTTGGGGGATATTCGTTTGGGTAATTTTTTGAAAGTTTTTGGGGATTTTTATTCAAATCCGC ATGCTTGCTGTGGATAAAATATTTGCAACTTTAGATG TTTTTTGTGAGTGTGTGAGGTGTGAAAGTGTGTGAAAAGTTGAAATAATTATCAAAAAACCAAGCAAAACCGAGTCGTCTCAACAGAAAAAATAACGCGTGAAGCGGATTAGAGTGATATTTGGCTGAAAAGTTAGTTAAAGTGAATAATAAATACGTGGAACAAAAGTGTACTATTACCAATTCCGGATGGTACTAATTACATTGAGATTTATGAATTTCTTATTTTGCTGAAATTTTGAAACAATAATTCAAAAATTT CCCTCAACCAGTACAGCTGGGATTGGCATAAAGCTTCACCGACAGCAACACATTTGTTGAGAGAGAATTGAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGACTGCACCGTATCCTGCAGCGCACTTCAGCGGTGGTGGTGGTGACAACAATTGCTTCAAAAAT] consensusID : consensus_8938#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 785 fasta sequence [GAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGCCATCGGCCGGTGTTTGCGCAGAATCCCTATCAGACCTATCCACGCTACGATGCCGGCGCACCCTGGATGCCGACAACGCAGCTGAGCAGCTACACGTCCTGCTCGAGCCGTACTAACTACACCTACTCAGCACCGCTCCAACAGTCGGTACAACCGGTAACGATCAACACGTACGGATCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACAACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCTTTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAACTCCTACCAGAAGTCGTACCTGTCCCAACCTAACGGTTAATCGGTAACGTCGGTGACGTTCGCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCCACCAGCAACAACGACAGCTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAGTAAGGTAGTTAGACGCCCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTACTGAACAGACACGATCACTCAAAGTAGGAAAACGGTAGCAAGTGAATGCTATTGTTGTGTATGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGTTTTCTTCTTAGGTACCATTTATTTGTCTAACGCCTTTCAAATAGATGCTTATAAGCTCAAAAA] [-] EMBL CNS08XNQ [GAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGCCATCGGCCGGTGTTTGCGCAGAATCCCTATCAGACCTATCCACGCTACGATGCCGGCGCACCCTGGATGCCGACAACGCAGCTGAGCAGCTACACGTCCTGCTCGAGCCGTACTAACTACACCTACTCAGCACCGCTCCAACAGTCGGTACAACCGGTAACGATCAACACGTACGGATCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACAACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCTTTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAACTCCTACCAGAAGTCGTACCTGTCCCAACCTAACGGTTAATCGGTAACGTCGGTGACGTTCGCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCCACCAGCAACAACGACAGCTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAGTAAGGTAGTTAGACGCCCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTACTGAACAGACACGATCACTCAAAGTAGGAAAACGGTAGCAAGTGAATGCTATTGTTGTGTATGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGTTTTCTTCTTAGGTACCATTTATTTGTCTAACGCCTTTCAAATAGATGCTTATAAGCTCAAAAA] consensusID : consensus_8938#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 273 fasta sequence [GCACCCTGGATGCCGACGACGCAGCTGAGCAGCTACACGTCCTNNTCGAGCCGTACCTAACCTACACCCTACTCCAGCCANCCGNTNTTAANTTTTTCCGNCAGCCTCCCANCCAGTTCCNGTTNACNAACCCGGTTAAACGNATCAAACCACGTTACCGGTTTCCGCCTGTTCCCAACCAATCCTAAAACCCCNNNCGCCCGTTTTCCGGGCCAGCCCCCACCCCCCTCCCCTGCCGCCACCGGCCGGTTTCCGAAGCCCCCCCACCTATTC] [+] EMBL BX619273 [GCACCCTGGATGCCGACGACGCAGCTGAGCAGCTACACGTCCTNNTCGAGCCGTACCTAACCTACACCCTACTCCAGCCANCCGNTNTTAANTTTTTCCGNCAGCCTCCCANCCAGTTCCNGTTNACNAACCCGGTTAAACGNATCAAACCACGTTACCGGTTTCCGCCTGTTCCCAACCAATCCTAAAACCCCNNNCGCCCGTTTTCCGGGCCAGCCCCCACCCCCCTCCCCTGCCGCCACCGGCCGGTTTCCGAAGCCCCCCCACCTATTC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CCGGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCACACATTCGCTGCCTCC 60 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 GGGACATTAAAATTCGCAGTGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCCAGAGAT 120 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CGTGCTGGGGGATATTCGTTCTTATCCGATCAGTTTGGGTAATTTTTTGAAAGTTTTTGG 180 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 GGATTTTTATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACTTTCGATGT 240 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TTGTTGTGAGTGTGTGAGGTGTGAAAGTGTGTGAAAAGTTGAAATAATTATCAAAAAACC 300 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 AAGCAAAACCGAGTCATCTTTACAGAAGAAATAACGCGTGAAGCTGATTAGAGTGATATT 360 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TGGCTGAAAAGTTAGTTAAAGTGAATAATAAATACGTGGAACAAGAGAGTATTATTTCCA 420 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 ATTCCGGATGATACTAATTACATAGAGATTTATGAATTTCTTATTTTACTGAAATTTTGA 480 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 AACAATAATTCAAAAATTTCCCTCAACCAGTACGTGTTGAGCTTCACCGACAGCAACACA 540 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TTTGTTGAGAGAGAATCTAAAACCCTGTGGAAATAATGTGTGCAGTGGTTGTGATTAGTG 600 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGACTGCACCGT 660 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 ATCCTGCAGCGCACTTCAGCGGTGGTGGTGGTGACAAGAATTGCTTCAAAAATTTCAACG 720 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 ATTCTTATTGGAAGTGAAATCGACTACATGTTGGCGACAACCGCCAACAGTGACATGGCG 780 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CCGCCAGACGGGCCCATGCAGTACGACTCGAAATGGTCACCGATGAACATTATCAGCATG 840 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CCGACCAAGATCAAGCAAGAGGGCTTCAACGTATTAAGTCATCTAGACGTGTACCACCCG 900 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CTTGCAGTATCGCTCCCAGCGTACGATCAGGTGAAATCTTCATCGCCCTCCTCCCTGCAG 960 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CAACTGCCGACCGTGATCGAGCGGCTGCACGAGGAAACGGGAAGCTCACCCGACCATCAA 1020 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CATCAGCATCTTGCACAGCAGCAGCACCAGCACCAGCAACAACACCAGCAGCAGCAACAC 1080 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CAGCAGCAGCACCAGCAACAACAACTGCATCATAACATCGGTTCGTTGGCGCTATCATCC 1140 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TCCAAACCGTCCAGCCAGGGTCCGGATGAGCTGCCGAGCAATAGCTTAGCACCGGATGAT 1200 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CTGCACGGTGGCCAGATACCGACAACGCTTCCCCAACCCAACTCCACTAACAACAATAAC 1260 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 AACAACCACACACCAAACCAGAATCAGACCACTAGCAACCAGAGCTCCACAAACTCTACC 1320 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 ACCAGCAATGGTGGAGCATCGACGGTCAGCAACAGCAGTACGACTAACAGCAGCAGTCTA 1380 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TCCACATACGATTGCAGCTCCACCACAAGTCCGACGGGCAGCCGGAACTCGAATGTGAAG 1440 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CCACCGTACAGCTATGTGGCGTTAATTGCAATGGCGATACAGAGCTCACAGATGAAGCGT 1500 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 GCAAGTTTGAGTGAAATCTACGGTTACATCACCTCCCGGTTTCCGTACTACGAGAAGAAC 1560 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 AAGAAGGGCTGGCAGAACTCGATCCGCCACAATCTCAGCCTGAACGAGTGCTTCGTGAAG 1620 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 ATTCCGCGGGAGGGCGGTGGCGAGCGGAAGGGCAACTACTGGACGCTTGACCCGCAGTAC 1680 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 GAGGACATGTTCGAGAATGGCAACTACAAGCGTCGCCGACGGATGAAGCGCCCGTACCGG 1740 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 --------------GAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGC 46 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 ACTGGACACTACTCGAAAATGTTCGGCGACTCGTACGTGACCAACCCGGGCAACTTTGGC 1800 consensus_8938#1 --------CCGCCCACGCGTCCGAGAACGTGTGTGCGTGTGCAACTGTTGTCGTTTGGCT 52 consensus_8938#2 CATCGGCCGGTGTTTGCGCAGAATCCCTATCAGACCTATCCACGCTACGATGCCGGCGCA 106 consensus_8938#3 ---------------------------------------------------------GCA 3 consensus_8938#0 CATCGGCCGGTGTTTGCGCAGAATCCCTATCAGACCTATCCACGCTACGATGCCGGCGCA 1860 consensus_8938#1 GACGTGCGCGCACCCGGGGGATGGTAAAAGCGAAAAAGTGAACACGGCTCTCCGTTAGTA 112 * * consensus_8938#2 CCCTGGATGCCGACA--ACGCAGCTGAGCAGCTACACGTCCTGCTCGAGCCGTACTAACT 164 consensus_8938#3 CCCTGGATGCCGACG--ACGCAGCTGAGCAGCTACACGTCCTNNTCGAGCCGTACCTA-- 59 consensus_8938#0 CCCTGGATGCCGACG--ACGCAGCTGAGCAGCTACACGTCCTGCTCGAGCCGTACTAACT 1918 consensus_8938#1 AGCGAACAGTTTTCGTTAAGTAAACAACCAACTTCGGTCCGCGCGCGCAC-ACACTCGCT 171 * * * * * * * ** ** * * ** * ** consensus_8938#2 ACACCTACTCAGCACCG----------------CTCCAACAGTCGGTACAACCGGTAACG 208 consensus_8938#3 --ACCTAC---ACCCTA----------------CTCCAGC--------CANCCGNTN--- 87 consensus_8938#0 ACACCTACTCAGCACCGTATAATTTTTCGCAG-CTCCAACAGTCGGTACAACCGGTAACG 1977 consensus_8938#1 --GCCTCCGGGACATTAAAATTCGCAGTGTGGTGTCCAAAAGGGAGCAGATCCGGCACCC 229 *** * * **** * *** consensus_8938#2 ATCAACACGTACGGATCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACA 268 consensus_8938#3 -TTAANTTTTTCCGNCAGCCTCCCANCCAGTT---CCNGTTNACNAACCCGGTTA--AAC 141 consensus_8938#0 ATCAACACGTACGGTTCGCTGTCCAACAATCTAGACACTTTCGCCGTTTCGGGCAGCACA 2037 consensus_8938#1 -AGAGATCGTGCTGGGGGATATTCGTTTGGGTAATTTTTTGAAAGTTTTGGGGGATTTTT 288 * * * * * * * * ** * consensus_8938#2 ACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCT 328 consensus_8938#3 GNATCAAACCACGT-TACCGGTTTCCGCC----TGTTCCCAACCAATCCTAAAACCCCNN 196 consensus_8938#0 ACACCTCCCTGCGCACGGCGGTTCGAGCCACACTATCCCTATTGGGACACGACCTTACCT 2097 consensus_8938#1 ATTCAAATGTGCATATGCTTGCTGTGGATAAAATATTTGCAACT--TTCGATGTTTTTTT 346 * * * * * * * consensus_8938#2 TTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAAC 388 consensus_8938#3 NCGCCCGTT-TTCCGGGCCAGCCCCC--ACCCCCCTCCCCTGCCGCCACCG--GCCGGTT 251 consensus_8938#0 TTGCCGGTGGTTAAAGACGAACCGACGAATCAGATGAGCGTATCCTCATCGCAACAGAAC 2157 consensus_8938#1 GTGAATGTGTGAGATGTGAAAGTGTGAGAAAAGTTGAAAGAATTATCGAAA-AACCAAGC 405 * ** * * * * * consensus_8938#2 TCCTACCAGAAGTCGTACCTGTCCCAACCT-AACGGTTAATCGGTAACGTCGGTGACGTT 447 consensus_8938#3 TCCGA--AGCCCCCCCACCTATTC------------------------------------ 273 consensus_8938#0 TCCTACCAGAAGTCGTACCTGTCCCAACCTTAACGGCTAATCGGTAACGTCGGTGACGTT 2217 consensus_8938#1 AAAACCGAGTCGTCTCAACAGAAAAAATAACGCGTGAAGCTGATTATAGTGATTTTTGGC 465 ** * * * consensus_8938#2 CGCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCCACCAGCAACAACGAC 507 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 CTCTCCAATCCCCCGAGCAGTAGTGTGACGGCCGATACGGACTCTACCAGCAACAACGAC 2277 consensus_8938#1 TGAAAATTTAGTTAAAGTGAATAATAAATACGTGGAACAAAAGTGTACTATTACCAATTC 525 consensus_8938#2 AGCTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAG 567 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 AACTTCATGCGTAACCTGTGGCAACTGTCGTCAGCGTACCATCGCCGGCGTTTGCTGGAG 2337 consensus_8938#1 CGGATGGTACTAATTACAAAGAGATTTATGAATTTCTTATATTGCTGAAATTT--TGAAA 583 consensus_8938#2 TAAGGTAGTTAGACGCCCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTAC 627 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TAAGGTAGCTAGACGCGCCGCACGTCTGTGGAAAGCTTCTAAAGCACTATCTATTATTAC 2397 consensus_8938#1 CAATAATTCAAAAATTTCCCTCAACCAGTACGTGGCGCTGGGATAAAGCTTTACCGACAG 643 consensus_8938#2 TGAACAGACACGATCACTCAAAGTAGGAAAACGGTAGCAAGTGAATGCTATTGTTGTGTA 687 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TGAACAGACACGATCACTCAAAGTAGGAAAACAGTAGCAAGTAAATGCTATTGTTGTTTA 2457 consensus_8938#1 C-AACACATTTGTTGAGAGAGAATTGAAAACCCTGTGGAAAT-AATGTGTGCAGTGGTTG 701 consensus_8938#2 TGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGTTTTCTTCTTAGGTACCATTTATTTG 747 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TGTCTTTTATGCTGTGTAAATTTGCTTTTTTCGGGTCTCTTCTTAGGTACCATTTATTTG 2517 consensus_8938#1 TGATTAGTGCATAGTGTGAATTTAGTGCTTTATTGCCACTGAGTGCCTGCCGATATACGA 761 consensus_8938#2 TCTAACGCCTTTCAAATAGATGCTTATAAGCTCAAAAA---------------------- 785 consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TCTAACGCCTTTCAGATAGATGCATATAAGCTCGTCTCTCTTCCGAAACGGAAAATGATA 2577 consensus_8938#1 CTGCACCGTATCCTGCAGCGCACTTCAGCGGTGGTGGTGGTGACAACAATTGCTTCAAAA 821 consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 GCTCTCCGAGGCAAATAGTTTGATAGCTTTGTTTAGATCATTTGATCTGTTTTCTTTGTA 2637 consensus_8938#1 AT---------------------------------------------------------- 823 consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TTTATTAACTCGTAACACAAATCGATGCTACTATCTGTATCCTCCAGCAAAGCAAGATGC 2697 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 TAACTGTACCAAACCAAACTCAAACTCCGCAGACACATTGGAGGCTCGGATCTGAAGACA 2757 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------------------------------------------------------------ consensus_8938#3 ------------------------------------------------------------ consensus_8938#0 AGGGAAGCATGAAATTTACCGTCCAAAATTTGCTAATGCATAGAGTCGAAAGTTATAACG 2817 consensus_8938#1 ------------------------------------------------------------ consensus_8938#2 ------- consensus_8938#3 ------- consensus_8938#0 AGGCATT 2824 consensus_8938#1 ------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||