These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8950#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1510 fasta sequence [TTTTTGCACAAACGTGTTTGCACACCTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTGGTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGCCTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGTCCGCACCGCCTGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGGATGAGATCGCGCGAGTCCGGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTATAGCGTCGGCCGTCTTCTTTCGATTGTCCGCACAGAATGGGGGCATTCCCGTCAACATGTCGAACATGAGGGCACCG-AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCGCTCCGGCCGCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCG-ACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAGAGGGATGCCTAACCGCCTCTAATATGTTTCCTCGGCGCGT] [+] EMBL CNS09FKC [TTTTTGCACAAACGTGTTTGCACACCTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTGGTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGCCTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGTCCGCACCGCCTGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGGATGAGATCGCGCGAGTCCGGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTATAGCGTCGGCCGTCTTCTTTCGATTGTCCGCACAGAATGGGGGCATTCCCGTCAACATGTCGAACATGAGGGCACCGAAGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGC ] [+] EMBL CNS093HQ [ atTTTTAACACCACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACA GCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACGGATGGGGCGACGTACGTGAAA CCTGGAAGATTAGATTGACACTCTCACTCAGCGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTGGTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGCCTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGCCCGCACCGCCTGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGGATGAGATCGCGCGAGTACGGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTATAGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAATGGGGGCATTCCCGTCAACATGTCGAACATGAGGGCACCG AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGA ] [-] EMBL CNS093HP [ TGTCGATTTTTTGGGCACCG AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGAACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCGCTCCGGCCGCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCG ACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAGAGGGATGCCTAACCGCCTCTAATATGTTTCCTCGGCGCGT] [-] EMBL CNS09FKB [ CG AGCGACCACCAATCGACCGCTTCCTGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCGCGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCGCTCCGGCCGCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCT ] consensusID : consensus_8950#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1297 fasta sequence [AGGAAGGGAACACCATTCAACGCCCTTTTGCATCATTTTAGCTTTCACACAATTTCATTCATAATTCTATAGCGCACCTTCTTTCCCCTAGCCTTACAGAGCACAACGTAAAATTGCTTAAAAACACTACGGCTTAACGACCTGTGTTTGCGCGGCGCCTTTATGTTTCCACCGTTCTGGGAGATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTTTTCCTACTAGCGCTTATCGCCTGAGTGGAGCAGTTTAAAAACAATCAGCAAAGGAAAAGCTCCATAAACTGAGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTAACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTCTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCAGTTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCCCTCCGGCCCCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGATGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGATCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGGACGCGTGGGCGG] [+] EMBL CNS08M8V [AGGAAGGGAACACCATTCAACGCCCTTTTGCATCATTTTAGCTTTCACACAATTTCATTCATAATTCTATAGCGCACCTTCTTTCCCCTAGCCTTACAGAGCACAACGTAAAATTGCTTAAAAACACTACGGCTTAACGACCTGTGTTTGCGCGGCGCCTTTATGTTTCCACCGTTCTGGGAGATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTTTTCCTACTAGCGCTTATCGCCTGAGTGGAGCAGTTTAAAAACAATCAGCAAAGGAAAAGCTCCATAAACTGGGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTG ] [-] EMBL CNS08M8U [ CTGTGTTTGCGCGGCGCCTTTATGTTTCCACCGTTCTGGGAGATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTTTTCCTACTAGCGCTTATCGCCTGAGTCGAGCAGTTTAAAAACAATCAGCAAAGGAAAAGCTCCATAAACTGAGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTAACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTCTATGCACTCACCCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTGCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGTGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCAGTTGC ] [-] EMBL BM622409 [ AGGGAAATAAACAAATGTAAAGTAATCCCTGGAGGAAGTGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGACTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTAACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTCTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGACTACGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAACACCGGCCGCT CCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCgg ] [-] EMBL BM620461 [ GTTATTCTAATCTTTTCCTCGGTGATTTGTTGTATGTAGTGGTAACACACACACAGACACGCAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTTGTATGCACTCACGCACGCATTGTTCGGACCAAATTGCCTTTTCTTATTGTTTACGCTAGACTCCGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTATAAAT ] [-] EMBL BM587574 [ CTCATTCGATGCTGCTTCCTTCCTTCATTTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCGTGCTGCAGCACATCTCTTAGGTGACGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGATACACATCCATCATTTCGTCCTGTGGCGAGGCCCGCGGCGCGAACGGTTGCAGATGGGGCGGCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAACACCGGCCGCTCCACCAGCCGGTTGCGTATGATTGTGAGGTTGCTGAGCGGACGACGGCTGCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGATGATGGTTGTGCATGTTTTGATGCGGGGCCATCTTCCAGGCGCCACTGCTCCCACTGCCATTCTCCATCGGCGTTGCTCCTGTCCCTCCGGCCCCGCCCATCATTCGACTGCTGCCGGCACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGATGATGGTGCTGGTGCAGGTTGTGGCGGTGCATGCGACGGGGCGATCGGGGCATCGTGATGCGCGACTGCATGTCCTCCAGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAGCGGACGCGTGGGCGG] consensusID : consensus_8950#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 715 fasta sequence [TTCATCAACCGGCGGATGAGATCGCGCGAGTCCCGGTGTCAGGTAGCCCGGGATGTTCAGCTTATCCTTCAGTATAGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAACGGGGGCATTCCCGTCAGCATATCAAACATGAGGGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTAC-AATGCCCTCCTGGATGTGTTCCTTGCACAGGCCAAAGTCGGTCAGCTTCACGTGGCCCTTCGCATCGAGCAGCACATTCTCCGGCTTCAGATCCCGATAGATGATGCCCAGATTGTGCAGATGCTCCAGGGCGAGAATGATTTCACATAGGTAAAAGCATGCAGTGTCCTCCAAAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAAGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAAAGGGATGCCTAACCGCCTCTAATATGTTTCGCTCGGCGCGTGTGTGGGCTGTGTCTTTTTGATTTCTAACTATCGACGCCTTCTTTAACACCTTCATCGCGAAGTACGAGTTTGCATCAGCACCAGTGGTTTTTCTGACTTGGAAGACTTTACCGTATCCGCCTTTGCCTAATACTTTCTTTAGCCGG] [-] EMBL BM653800 [TTCATCAACCGGCGGATGAGATCGCGCGAGTCCCGGTGTCAGGTAGCCCGGGATGTTCAGCTTATCCTTCAGTATAGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAACGGGGGCATTCCCGTCAGCATATCAAACATGAGGGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTAC AATGCCCTCCTGGATGTGTTCCTTGCACAGGCCAAAGTCGGTCAGCTTCACGTGGCCCTTCGCATCGAGCAGCACATTCTCCGGCTTCAGATCCCGATAGATGATGCCCAGATTGTGCAGATGCTCCAGGGCGAGAATGATTTCACATAGGTAAAAGCATGCAGTGTCCTCCAAAAATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAAGTATTCTAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAAAGGGATGCCTAACCGCCTCTAATATGTTTCGCTCGGCGCGTGTGTGGGCTGTGTCTTTTTGATTTCTAACTATCGACGCCTTCTTTAACACCTTCATCGCGAAGTACGAGTTTGCATCAGCACCAGTGGTTTTTCTGACTTGGAAGACTTTACCGTATCCGCCTTTGCCTAATACTTTCTTTAGCCGG] [-] EMBL BX604331 [ TTCCCGTCAGCATATCAAACATGAGAGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCTGCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTGTGCGTTACAAATGCCCTCCTGGATGTGTTCCTTGCACAGGCCAAAGTCGGTCAGCTTCACGTGGCCCTTCGCATCc ] consensusID : consensus_8950#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 549 fasta sequence [CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGCTACTTTACACCGAAACACACACACACACACACTCACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTTGTTTAGAAGACGCTCAGCGCCGTAAAAAAGGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAGCACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTGTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCACGCACTGAAAGACAATTTGCTTCTTCTTGCCGTGGCTCAGCGCGG] [-] EMBL BM603326 [CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGCTACTTTACACCGAAACACACACACACACACACTCACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTTGTTTAGAAGACGCTCAGCGCCGTAAAAAAGGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAGCACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTGTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCACGCACTGAAAGACAATTTGCTTCTTCTTGCCGTGGCTCAGCGCGG] consensusID : consensus_8950#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 514 fasta sequence [CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGTTACTTTACACCGACACACACACACACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTCGTTTAGAAGACGCTCAGAGCCGTAAAAAAGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAACACACACACACACACACACACACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGAACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCCGG] [-] EMBL BM654983 [CCTGCTTCCTGTGCACTGCACTCTTCTTTGCGCTGTGGCTCTTTGCGTTACTTTACACCGACACACACACACACACACTGCTTGCTTTGATTTTGATTCTTAATTCGTGAGCAGAGGATTTCACTTTACGAAGGGTTTGCACACTTGTTTCGTTTAGAAGACGCTCAGAGCCGTAAAAAAGGGCTGCCACGCACAAAATGAGGTAGGTTTTTGTTTCTGTGTTTGTTTGCCTGTATGTGCCGACACACCGTGCAACACACACACACACACACACACACACACACACACACACACACACACACACACTGTTAACTTTCGCTCTATTGCTGAAGGTTTTTTTTTTTTGTTTTCTTTTGCACAAACGTGTGTGCACACACTTTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCTTCACCCGTGGAACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCACACCGCAACTCGCAATCTGCCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8950#0 TTTTTGCACAAACGTGTTTGCACACCTTTTAACACGACGTAACACACTTTTGTTTTATTT 60 consensus_8950#1 ------------------------------------------------------------ consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 TTTGACGGTGGAAAAACTGCTTCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCA 120 consensus_8950#1 ------------------------------------------------------------ consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 CATGACGCGCTGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACT 180 consensus_8950#1 -------------AGGAAGGGAACACCATTCA--ACGCCCTTTTGCATCATTTTAGCTTT 45 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 CTCAC----TCAG-CGTGGTTTCATCGGGCGAATCCACCGGAATCTCTTTCGTGAACTTG 235 consensus_8950#1 CACACAATTTCATTCATAATTCTATAGCGCACCTTCTTTCCCCTAGCCTTACAGAGCACA 105 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 GTATCAAACTGCGACACATCATCCTCACTGGCAAGCACTGGTTTGATCGGTGGATCTAGC 295 consensus_8950#1 ACGTAAAATTGCTTAAAAACACTACGGCTTAACGACCTGTGTTTGCGCGGCGCCTTTATG 165 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 CTTCTCTTGACCACATCGTCCCAGTTGACGTTCTTGAAGAAGGGATGTGTCCGCACCGCC 355 consensus_8950#1 TTTCCACCGTTCTGGGAG-----ATTGAGAGTTTAGAAGAACAGGAAAAGACATGATGTT 220 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 TGCCCATCGGTCGGCCCGCTGCCGAGGCGCTGCGACACCTGCCGCTTCATCAACCGGCGG 415 consensus_8950#1 TTCCTACTAGC--GCTTATCGCCTGAGTGGAGCAGTTTAAA-------AACAATCAGCAA 271 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ---------------------------------------------TTCATCAACCGGCGG 15 consensus_8950#0 ATGAGATCGCGCGAGTCC-GGCGTCAGGTAGCCCGGGATGTTCAGTTTATCCTTCAGTAT 474 consensus_8950#1 AGGAAAAGCTCCATAAAC-TGAGGGAAATAAAC--AAATGTAAAGTA-ATCCCTGGAGGA 327 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ATGAGATCGCGCGAGTCCCGGTGTCAGGTAGCCCGGGATGTTCAGCTTATCCTTCAGTAT 75 consensus_8950#0 AGCGTCGGCCGTCTTCTTTCGATTGTCCGCACAGAATGGGG--GCATTCCCGTCAA---- 528 consensus_8950#1 AG---TGGTTCTGTTCGTTGGAGCGTTGGAAGAAAGACGGAAAGTAAAACGGAAAAAGGA 384 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 AGCGTCGACCGTCTTCTTTCGATTGTCCGCACAGAACGGGG--GCATTCCCGTCAG---- 129 consensus_8950#0 --CAT-GTCGAACATGAGGGCACCGAGCGACCACCAATCGACC-GCTTCCTGTGTCCGCT 584 consensus_8950#1 CTTATAGTTGAAATTCGTTATTCTAATCTTTTCCTTGGTGATTTGTTGTATGTAGTTGTA 444 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 --CAT-ATCAAACATGAGGGCACCGAGCGACCACCAATCGACCGCTTTGCCGTGTCCGCT 186 consensus_8950#0 GCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTG----TGCGTTA 640 consensus_8950#1 ACACACACACAGACACACAGACTCTTCCCTACCTATCTCACGCACCTTTGTTTTCTCTTT 504 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 GCGTGTTAGAATTTCCGGTGCCATGTACTCGATCGTACCGCAGAACGTG----TGCGTTA 242 consensus_8950#0 CTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGA 700 consensus_8950#1 CTATGCACTCACGCACGCATTGTTCGGAACAAATTGCCTTTTCTTATTGTTTACGCTAGA 564 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 CAATGCCCTCCTGGATGTGTTCCTTGCA-----------------------CAGGCCAAA 279 consensus_8950#0 CTACGGGTTAATTAGTTTTGGAGATGCACTCCCCCCTTCGATGCTGCTTCCTTCCTTCAT 760 consensus_8950#1 CTACGGGTTAATTAGTTTTGGAGATGCACTCCCTCCTTCGATGCTGCTTCCTTCCTTCAT 624 consensus_8950#3 ----------CCTGCTTCCTG---TGCACTGCACTCTTCTTTGC-GCTGTGGCTCTTTGC 46 consensus_8950#4 ----------CCTGCTTCCTG---TGCACTGCACTCTTCTTTGC-GCTGTGGCTCTTTGC 46 consensus_8950#2 ------GTCGGTCAGCTTCACG--TG-GCCCTTCGCATCGA-GCAGC-ACATTCTCCGGC 328 * ** * * ** ** ** consensus_8950#0 TTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGA 820 consensus_8950#1 TTTGCTTCATCGTTCTAAATGGTGTCTCTCTCGTCCTGCTGCAGCACATCTCTTAGGTGA 684 consensus_8950#3 GCTACTTTACA--CCGAAACACACACACACACACACTCACACACTGC-TTGCTTTGATTT 103 consensus_8950#4 GTTACTTTACA--CCGACACACACACACACA----------CACTGC-TTGCTTTGATTT 93 consensus_8950#2 TTCAGATCCCG---ATAGATGATGCCCAGATTGT---------GCAGATGCTCCAGGGCG 376 * * * * * * consensus_8950#0 CGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGAT 880 consensus_8950#1 CGAATTTCCTATAACTGCTATAATCCTCCAGTGTTGGCTAAGAGATGGACATTTCCGGAT 744 consensus_8950#3 TGATTCTTAATTCGTGAGCAGAGGATTTCACT-TTACGAAGGGTTTGCACACTTGTTT-T 161 consensus_8950#4 TGATTCTTAATTCGTGAGCAGAGGATTTCACT-TTACGAAGGGTTTGCACACTTGTTT-C 151 consensus_8950#2 AGAATGATTTCACATAGGTAAAAGCATGCAGTGTCCTCCAAAA-ATATTCCCTCGCGC-T 434 ** * * * * ** * * * * * * consensus_8950#0 ACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGAAGATGGGGCG 940 consensus_8950#1 ACACATCCATCATTTCGTCCTGTGGCGAGGGCCGCGGCGCGAACGGTTGCAGATGGGGCG 804 consensus_8950#3 GTTTAGAAGACGCTCAGCGCCGTAAAAAAGGGGCTGCCACGCACAAAATGAGGTAGGTTT 221 consensus_8950#4 GTTTAGAAGACGCTCAGAGCCGTAAAAAAGGG-CTGCCACGCACAAAATGAGGTAGGTTT 210 consensus_8950#2 CTAAATGCATGAA--CAGCTCGCCGCC--GCTCAAGTATTCTAGAATTAAATACAACTTG 490 * * * * * * consensus_8950#0 GCGTTCGTCGCGAGAAGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGACCACCGCTAA 1000 consensus_8950#1 GCGTTCGTCGCGAGATGGAGGCCGCATTGAACGGGCGGCTACCGGGCGGCCCACCGCTAA 864 consensus_8950#3 TTGTTT-CTGTGTTTGTTTGCCTGTAT-GTGCCGACA--CACCGTGCAGCACAC-ACACA 276 consensus_8950#4 TTGTTT-CTGTGTTTGTTTGCCTGTAT-GTGCCGACA--CACCGTGCAACACAC-ACACA 265 consensus_8950#2 CCACCGGTCTGGAAGGCGTACACTAGCTCTAC-GATAAAGGGATGCCTAACCGCCTCTAA 549 * * * * * * * * consensus_8950#0 CACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCT 1060 consensus_8950#1 CACCGGCCGCTCCACCAGCCGGTTGCGTCTGATTGTGAGGTTGCTGAGCGGACGACGGCT 924 consensus_8950#3 CACACACACACACACACACAC--------------------TGTTAA--------CTTTC 308 consensus_8950#4 CACACACACACACACACACACACACACACACACACACACACTGTTAA--------CTTTC 317 consensus_8950#2 TATGTTTCGCTCGGCGCGTGTGTGGGCTGTGTCTTTTTGATTTCTAA------------- 596 * * * * * consensus_8950#0 GCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCACGTGCGGAT 1120 consensus_8950#1 GCTGCTGCTGCTGCTGGTTCGGTGGCACCATTTGACCTCCTCCCCGATGCAGTTGCGGAT 984 consensus_8950#3 GCT-CTATTGCTGAAGGTTTTTTTTTGTTTGTTTTCTTTTGCACAAACGTGTGTGCACAC 367 consensus_8950#4 GCT-CTATTGCTGAAGGTTTTTTTTT-TTTGTTTTCTTTTGCACAAACGTGTGTGCACAC 375 consensus_8950#2 ----CTATCGACGCC--TTCTTTAACACCTTCATCGCGAAGTACGAGTTTGCATCAGCAC 650 ** * * ** * * * * consensus_8950#0 GATGGTTGTGCATGTTTTGATGCGGGGCCATCTT-CCAGGCGCCACTGCTCCCACTGCCA 1179 consensus_8950#1 GATGGTTGTGCATGTTTTGATGCGGGGCCATCTT-CCAGGCGCCACTGCTCCCACTGCCA 1043 consensus_8950#3 ACT--TTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCT- 424 consensus_8950#4 ACT--TTTAACACGACGTAACACACTTTTGTTTTATTTTTTGACGGTGGAAAAACTGCT- 432 consensus_8950#2 CA-----GTGGTTTTTCTGACTTGGAAG-ACTTTACCGTATCCGCCTTTGCCTAATACTT 704 * * ** * * * * consensus_8950#0 TTCTCCATCGGCGTTGCTCCTGTCGCTC-CGGCCGCGCCCATCATTCGACTGCTGCCGGC 1238 consensus_8950#1 TTCTCCATCGGCGTTGCTCCTGTCCCTC-CGGCCCCGCCCATCATTCGACTGCTGCCGGC 1102 consensus_8950#3 TCACCCGTGGGACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCAC 484 consensus_8950#4 TCACCCGTGGAACACGCACTTTTTTCTCGTTGTTTTTCACATGACGCGCTGCACACGCAC 492 consensus_8950#2 TCTTTAGCCGG------------------------------------------------- 715 * * consensus_8950#0 ACCGTGGTGGTGGTGGTGCG-ACTGCCGTGATGGTGATTGTGCTGATGGTGCTGGTGCAG 1297 consensus_8950#1 ACCGTGGTGGTGGTGGTGCGCACTGCCGTGATGGTGATTGTGATGATGGTGCTGGTGCAG 1162 consensus_8950#3 ACCGCAAC--TCGCAATCTGCACGCACTGAAAGACAATTTGCTTCTTCTTGCCGTGGCTC 542 consensus_8950#4 ACCGCAAC--TCGCAATCTGCCGG------------------------------------ 514 consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 GTTGTGGCGGTGCATGCGACGGGGCGACCGGGGCATCGTGATGCGCGACTGCATGTCCTC 1357 consensus_8950#1 GTTGTGGCGGTGCATGCGACGGGGCGATCGGGGCATCGTGATGCGCGACTGCATGTCCTC 1222 consensus_8950#3 AGCGCGG----------------------------------------------------- 549 consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 CAGAA---ATATTCCCTCGCGCTCTAAATGCATGAACAGCTCGCCGCCGCTCAGGTATTC 1414 consensus_8950#1 CAGCACGGATGGGGCGACGTACGTGAAACCCTGGAAGATTAGATTGACACTCTCACTCAG 1282 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 TAGAATTAAATACAACTTGCCACCGGTCTGGAAGGCGTACACTAGCTCTACGATAGAGGG 1474 consensus_8950#1 CGGACGCGTGGGCGG--------------------------------------------- 1297 consensus_8950#3 ------------------------------------------------------------ consensus_8950#4 ------------------------------------------------------------ consensus_8950#2 ------------------------------------------------------------ consensus_8950#0 ATGCCTAACCGCCTCTAATATGTTTCCTCGGCGCGT 1510 consensus_8950#1 ------------------------------------ consensus_8950#3 ------------------------------------ consensus_8950#4 ------------------------------------ consensus_8950#2 ------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||