|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8951#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1189 fasta sequence
[CCAATCTCAATAACGTCATATGATCACAAGTGCAAATTCGGAGGGCAGATAACTTCACTGGACGACAAGATGTTGCGGCCGATTTACGTTTTATTTGCGCTGTTTGCAGCAGCAAACTGTGATCAACTGTCCGTGCTGTATTCGCCCAAGGCGGCTAGCGAGGGGCAGCTGGTGGTGCGCTCGAAGCGTCAGGCCGGGGCGCCGAAACAGGCCG-AAACAGATGATCAAAACCCGATGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGCTGCTCGCTATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA-CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC-AA-CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTC-TTC-TTTTTTCGTCGTAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC-TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT----TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAGGTCCCCC]
[+] EMBL CNS09RDO [CCAATCTCAATAACGTCATATGATCACAAGTGCAAATTCGGAGGGCAGATAACTTCACTGGACGACAAGATGTTGCGGCCGATTTACGTTTTATTTGCGCTGTTTGCAGCAGCAAACTGTGATCAACTGTCCGTGCTGTATTCGCCCAAGGCGGCTAGCGAGGGGCAGCTGGTGGTGCGCTCGAAGCGTCAGGCCGGGGCGCCGAAACAGGCCG AAACAGATGATCAAAACCCGATGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGCTGCTCGCTATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AA CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTCTTTCTTTTTTTCGTCGTAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTTCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCC ]
[-] EMBL CNS08J5J [ GCTCGAAGCGTCAGGCCGGGGCGCCGAAACAGGCCG AAACAGATGATCAAAACCCGATGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGCTGCTCGCCATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTACTTCTGGTAGGCCATGAAGTGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATTGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACCGAC CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCAACGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCATCCCTCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGTAAGAGAGTCCTGGC TGCACAGTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGAGGATTTAGCCACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCAC TTGTTGTTTATTTGAGTTTCGATCGTCAGGTGTAGAAAATAAATAA GATAACA TCCAa ]
[-] EMBL CNS09RDP [ CGTCAGGCC GGGCGCCGAAACAGGCCGAAAACAGATGATCAAAACCCGATGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGCTGCTCGCTATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGACCCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTTACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AA CCCCCATTTCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGCGTGCAAACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCAAGAAAAAAA ]
[-] EMBL CNS08LY7 [ CAGATGATAAAAACCCGATGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGCTGCTCGCTATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTTTTACATCACTGCGGCCCAACAAGGCACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AA CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAA ]
[+] EMBL BX611956 [ GATCAAAACCCGATGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGTTGCTCGCCATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTACTTCTGGTAGGCCCTGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCATCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTTAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACCGAC CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCTTCCCTCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATAGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCACA ]
[+] EMBL CNS09LQW [ TGAACCTGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCACTGCTCGCTATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AA CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTTCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCAGGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCAAAGGTCCCCC]
[+] EMBL CNS09L1C [ TGGCCACCAAGTACAACAGCAACTATCCGGTGATTTTCAACATCATTCTGTGGTTCAGCGTTGTGCTAGTGTTTTCGCTGCTCGCTATCTCAATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATTGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AA CCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGACACACAAAGACTC TTC TTTTTTCGTAAAAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCAGG AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGC ]
[+] EMBL BM656750 [ ccgGCGTTGTGCTAGTGTTTTCGCTGCTCGCCATCTCAATTGTGATCGGCACGATGGACCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTACTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AACCCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCAACGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCTTCCCTCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATAGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGC ]
[-] EMBL CNS08KXJ [ ATTGTGATCGGCACGATGGATCCGGGCCGCGATTCCATCATCTACCGCATGACGTCGA CCAGAATGAAGAAGGACAACTAAATCCACACACCGTCCGCTTCACTTCCACTCTGCTTCTGGTAGGCCATGAAGCGTTTCCAGCGCGCGTAGATAAATTACCGTACCGTCGCTCTGTGACTCTGTGCACCCGATGACCTTAAGCATTACCATCCTGTTTGAGCGGAGTGAATCGATCGCACATAATTTGGAAAGTATTACCACATCACTGCGGCCCAACAAGAAACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AA CCCCCATTTCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCACCGGAAAAAAAAAGACTC TTT TTTTTTCGTCGTAAAACCATCCCCCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCAAACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCAGaa ]
[+] EMBL BM632645 [ ccgGTATTACCACATCACTGCGGCCCAACAAGACACAGAGCGTTTGCCGTTAGCGAGCACAGAGTAAAGAGTTAAGACC AACCCCCCATATCTGCTGGGACGAATCCGGAATGCACATTAAAACAGGAAGCTTAAGTCATCATTATCATTATCATCATCCAACGGACACACAAAGACTC TTC TTTTTTCGTCGTAAAACCTTCCCTCCGCGTCCGCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATAGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGAGGATTTAGCCACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCAATTGTTGTTGTTTATTTGAGTT TCGatcgt ]
[-] EMBL CNS09L1D [ ACCGGAAAAACAAAGACTC TTT TTTTTTCGTCGTAAAACCATCCCCCCGCGTCCCCCTACCATCCTGGGCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCAAACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCA ]
[-] EMBL CNS09LQX [ GCGCATACCGTTTGTCGTCAAGTACATTACGTTCCCGTGGGCCGATGATTGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCAAACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGTGGATCTAGCAACCAACCAACAACAGATTACGCGCAATCAATCCCTTTGTTTTCACTTGTTGTTGTTTATTTGAGTT TCGTCAGGTGTAGAAAATAAATAAGGATAACATTCCAGGA ]
[+] EMBL BM650183 [ ccGGCCGATGATAGGAATCAATATCGGGACAAAGCGTGCAAGAGAGTCCTGGC TGCACACTTACTCATCATCGTCGCAGTGAATCATCGCTCAACGTTCTATTCCCCCCCACGAGAAGCTATTGCTACCTTGGTTTCTGCCCATTGCGATACATGAGCCGCCCGCCGCTCCGTTTGCGTGTTGAGGATTTAGCCACCAACCAACAACAGATCACGCGCAATCAATCCCTTTGTTTTCAATTGTTGTTGTTTATTTGAGTTTCGATCGTCAGGTGTAGAAAATAAATAAGGATAACATTCC ]
clustalw multiple alignements is not computed in this case |
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||