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Anopheles gambiae
cluster # 8953 cluster # 8953       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8953#0 length = 1896 sequences # 8  
consensus_8953#1 length = 928 sequences # 3  
consensus_8953#2 length = 893 sequences # 2  

consensusID : consensus_8953#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1896
fasta sequence
                              [ATCGTACAAAATAAGTTGTAGTTTTGCGTGCAAATTAAATTAGTTTGTCTTT-AATTTCGTTGCCAGGAGCGTTTGATAAGGATTGTTACGGGGGAGGGGTTTGTAAGGAACGTGCGGAGGAGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGATGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGGTGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAGAACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAGAGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGTACTACTCAAACCATGGAATCGATTTTTATCCGTTTTTTCGATTACTGTTTTGACAGAGGTGCAGTAAGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTGTTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCAGAGTCAGCAAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACACCAACATATTATATACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTAGATGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATTTTTACAATAAGGACGTGAAGAAAGTGACTATTGGTATATACATACACATATACATTTATCTTATTATTCGCCAGGAAAGAGAGAGAGAGAGAGATAGAGTAGTGTGATGCGCGAAGGGGAAAAGAAACGAATCAGAAGAAAAAAAGAACACCGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAATTTGAAATTATTTCACAATCATCACATTTTAGTGATTGGCACAAAGATATTAGGCAGCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGCCCAGTGGTGGTGGTGCCGGTGGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTGTGTGAATGTATGTGTGTGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGT-TTGCATGAGTTTGGCTGGCAGCATATGGATACTGTAGTTTGATGTTGTCGAAAGCGCGCGCCGCGTGTGTCAAAATCGCTTGTGCACAGCAGGCGCGCGGTGGGTGGCACGGGCACGGCAGTTACGATGCTTTAAGTTGCGCGAGAAGAACAAACGTGTGGAGCAAAACCCGGATACCACTAGAACACTACGCCCCAGAAGAAGAAGAAAAAAACCCTAACACATCCATCGCAACCGACCAACCAACCAACCGGTAACGCCCATGTATTCAAAATTCCAAAAAAGGAAACAAA----AAACAAACAAACAAACAAACAAACTGCATTTTGCAAACAAAAAACTGTCTGACGTTCCTTAAATCATAGCTTTACCATTCGGGTGGTTTTTTTGTTGTTGTTGTTAAACGTATATATATTCGCAAAGCATAAGCAAAAATAGGCACATTTCAGGTAGTTTGTAGAGATAAATCGTNAGGGTTGTGCTTACTTAGGCATACGTAAGCTCGTNACACATCGTCTCCCACGACGAGGTGGNCGCCAATCTGTAGTGATGCTATCAATANAAATCGATACACTATGTACANNAAAAAAAAAA]

[+] EMBL BX614095             [ATCGTACAAAATAAGTTGTAGTTTTGCGTGCAAATTAAATTAGTTTGTCTTTCAATTTCGTTGCCAGGAGCGTTTGATAAGGATTGTTACGGGGGAGGGGTTTGTAAGGAACGTGCGGAGGAGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGATGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGGTGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAGAACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAGAGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BX614096             [        AAATAAGTTGTAGTTTTGCGTGCAAATTAAATTAGTTTGTCTTTCAATTTCGTTGCCAGGAGCGTTTGATAAGGATTGTTACGGGGGAGGGGTTTGTAAGGAACGTGCGGAGGAGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGATGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGGTGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAGAACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAGAGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGTACTACTCAAACCATGGAATCGATTTTTATCCGTTTTTTCGATTACTGTTTTGACAGAGGTGCAGTAAGAGCAGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX614094             [          ATAAGTTGTAGTTTTGCGTGCAAATTAAATTAGTTTGTCTTT TATTTCGTTGCCAGGAGCGTTTGATAAGGATTGTTACGGGGGAGGGGTTTGTAAGGAACGTGCGGAGGAGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGATGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGGTGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAGAACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAGAGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGTACTACTCAAACCATGGAATCGATTTTTATCCGTTTTTTCGATTACTGTTTTGACAGAGGTGCAGTAAGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTGTTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM635378             [                                                                                                                    ccgGGAGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGATGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGGTGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAGAACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAGAGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGTACTACTCAAACCATGGAATCGATTTTTATCCGTTTTTTCGATTACTGTTTTGACAGAGGTGCAGTAAGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTGTTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCAGAGTCAGCAAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACACCAACATATTATATACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTAGATGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATTTTTACAATAAGGACGTGAAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM594861             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccgatgCACCAACATATTATATACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTAGATGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATTTTTACAATAAGGATGTGAAGAAAGTGACTATTGGTATATACATACACATATACATTTATCTTATTATTCGCCAGGAAAGAGAGAGAGAGAGAGATAGAGTAGTGTGATGCGCGAAGGGGAAAAGAAACGAATCAGAAGAAAAAAAGAACACCGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAATTTGAAATTATTTCACAATCATCACATTTTAGTGATTGGCACAAAGATATTAGGCAGCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGCCCAGTGGTGGTGGTGCCGGTGGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTGTGTGAATGTATGTGTGTGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGT TTGCATGAGTTTGGCTGGCAGCATATGGATTCTGTAGTTTGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CF542013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    AGAGAGAGAGAGAAAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGTNGTGCATGAGTGTGGCTGGCAGCATATGGATACTGTAGTTTGATGTTGTCGAAA  GCGCGCCGCGTGTGTCAAAATCGCTTGTGCACAGCAGGCGCGCGGTGGGTGGCACGGGCACGGCAGTTACGATGCTTTAAGTTGCGCGAGAAGAACAAACGTGTGGAGCAAAACCCGGATACCACTAGAACACTACGCCCCAGAAGAAGAAAAAAAAAACCCTAACACATCCATCGCAACCGACCAACCAACCAACCGGTAACGCCCATGTATTCAAAATTCCAAAAAAGGAAACAAA    AAACAAACAAACAAACAAACAAACTGCATTTTGCAAACAAAAAACTGTCTGACGTTCCTTAAATCATAGCTTTACCATTCGGGTGGTTTTTTTGTTGTTGTTGTTAAACGTATATATATTCGCAAAGCATAAGCAAAAATAGGCACATTTCAGGTAGTTTGTAGAGATAAATCGTNAGGGTTGTGCTTACTTAGGCATACGTAAGCTCGTNACACATCGTCTCCCACGACGAGGTGGNCGCCAATCTGTAGTGATGCTATCAATANAAATCGATACACTATGTACANNAAAAAAAAAA]
[+] EMBL BX609488             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CAGT TTGCATGAGTTTGGCTGGCAGCATATGGATACTGTAGTTTGATGTTGTCGAAAGCGCGCGCCGCGTGTGTCAAAATCGCTTGTGCACAGCAGGCGCGCGGTGGGTGGCACGGGCACGGCAGTTACGATGCTTTAAGTTGCGCGAGAAGAACAAACGTGTGGAGCAAAACCCGGATACCACTAGAACACTACGCCCCAGAAGAAGAAGAAAAAAACCCTAACACATCCATCGCAACCGACCAACCAACCAACCGGTAACGCCCATGTATTCAAAATTCCAAAAAAGGAAACAAAAAACAAACAAACAAACAAACAAACAAACTGCATTTTGCAAACAAAAAACTGTCTGACGTTCCTTTAATCATAGCTTTACCATTCGGGTGGTTTTTTTGTTGTTGTTGTTAAACTTATATTTATTCGCAAAGCATAAGCAAAAATAGGCACAACTCAGGTAGTTTGTAGAGATAAATCGTTAAGGTTTTGCTTACTTAGGCATACGTAAGCT                                                                                           ]
[+] EMBL BX618846             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GT TTGCATGAGTTTGGCTGGCAGCATATGGATACTGTAGTTTGATGTTGTCGAAAGCGCGCGCCGCGTGTGTCAAAATCGCTTGTGCACAGCAGGCGCGCGGTGGGTGGCACGGGCACGGCAGTTACGATGCTTTAAGTTGCGCGAGAAGAACAAACGTGTGGAGCAAAACCCGGATACCACTAGAACACTACGCCCCAGAAGAAGAAGAAAAAAACCCTAACACATCCATCGCAACCGACCAACCAACCAACCGGTAACGCCCATGTAT                                                                                                                                                                                                                                                                                                                                       ]


>consensus_8953#0 ATCGTACAAAATAAGTTGTAGTTTTGCGTGCAAATTAAATTAGTTTGTCTTTAATTTCGT TGCCAGGAGCGTTTGATAAGGATTGTTACGGGGGAGGGGTTTGTAAGGAACGTGCGGAGG AGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGA TGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGG TGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAG AACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAG AGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGTACTACT CAAACCATGGAATCGATTTTTATCCGTTTTTTCGATTACTGTTTTGACAGAGGTGCAGTA AGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTG TTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCAGAGTCAGCAA GGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACACCAACATATTATAT ACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTAGA TGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATTTT TACAATAAGGACGTGAAGAAAGTGACTATTGGTATATACATACACATATACATTTATCTT ATTATTCGCCAGGAAAGAGAGAGAGAGAGAGATAGAGTAGTGTGATGCGCGAAGGGGAAA AGAAACGAATCAGAAGAAAAAAAGAACACCGCAAAAAGGAGCGCGCGCAACTACTACTGC ACACTGAAACATTACGAATCGTAATTTGAAATTATTTCACAATCATCACATTTTAGTGAT TGGCACAAAGATATTAGGCAGCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGC CCAGTGGTGGTGGTGCCGGTGGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTG TGTGAATGTATGTGTGTGTGAGAGAGAGAAAGAGAGAGAGAGAGAGAGAGAGAGGGAGAG AGAGAGAGAGAGGGAGAGAGAGAGAGAGAAGAGAGAGAGAGAGAGAGAGAGAGTAAGTTA GGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGTTTGCATGAGTTTGGC TGGCAGCATATGGATACTGTAGTTTGATGTTGTCGAAAGCGCGCGCCGCGTGTGTCAAAA TCGCTTGTGCACAGCAGGCGCGCGGTGGGTGGCACGGGCACGGCAGTTACGATGCTTTAA GTTGCGCGAGAAGAACAAACGTGTGGAGCAAAACCCGGATACCACTAGAACACTACGCCC CAGAAGAAGAAGAAAAAAACCCTAACACATCCATCGCAACCGACCAACCAACCAACCGGT AACGCCCATGTATTCAAAATTCCAAAAAAGGAAACAAAAAACAAACAAACAAACAAACAA ACTGCATTTTGCAAACAAAAAACTGTCTGACGTTCCTTAAATCATAGCTTTACCATTCGG GTGGTTTTTTTGTTGTTGTTGTTAAACGTATATATATTCGCAAAGCATAAGCAAAAATAG GCACATTTCAGGTAGTTTGTAGAGATAAATCGTNAGGGTTGTGCTTACTTAGGCATACGT AAGCTCGTNACACATCGTCTCCCACGACGAGGTGGNCGCCAATCTGTAGTGATGCTATCA ATANAAATCGATACACTATGTACANNAAAAAAAAAA



consensusID : consensus_8953#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 928
fasta sequence
                              [ATTCCCCACTGTCGTTCTTTCTCTCTTCACGCGCCCGCGCGCTCTCTCTCTCTCTCTATCTTCCTGTGCGAAAGTGGTTCGCGGGACAAACGGCCCGCCATGGCCGCCACGAATTGGAGTAGCCAAGTTTTATTTCTTTTTTTTTGCGGCCCCTGTCTAAGGGATAGTTAAGGTAGTACTTAAGGCTAATGCTAGACCCATTTCGCGCGTTGTGTTTTATCCTATGCAGTATTTTACCGATTAACCTGCGGCTTTGCGTTGCGCACATATTACCACAATACCAATCAGCGCCAGGCCATCGCCACAAATGAACCTGCAGTTCGAACAAAACAAATTCTTCACCACTACAGTATTGGGCTCGCGAGGTGGGTCTTTTTATA--ATAGAGCAGCCATGGGGAGGCAGCGGGGAAATCGCAATTGCCAGTGTGGCGTATGTGTGTAACGGTGCGAATAGGGAAGCAAAGCACCGGGGCACCAAGATACGACGAGCGAGTACCGGACAGGGGACGGGACGACGCGCGAGAAGGCTAAGAGCTAAGTTACCAATTAGGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAATTTGAAATTATTTCACAATCATCACATTTTAGTGATTGGCACAAAGATATTAGGCAGCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGCCCAGTGGTGGTGGTGCCGGTGGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTGTGTGAATGGTTGTGTGTGTGTGTGTGAGAGAGAGAGAAAGAATGAGAGAGAAAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGTTTGCATGAGTTTGGCTGGCAGCATATGGAT]

[+] EMBL BM649166             [ATTCCCCACTGTCGTTCTTTCTCTCTTCACGCGCCCGCGCGCTCTCTCTCTCTCTCTATCTTCCTGTGCGAAAGTGGTTCGCGGGACAAACGGCCCGCCATGGCCGCCACGAATTGGAGTAGCCAAGTTTTATTTCTTTTTTTTTGCGGCCCCTGTCTAAGGGATAGTTAAGGTAGTACTTAAGGCTAATGCTAGACCCATTTCGCGCGTTGTGTTTTATCCTATGCAGTATTTTACCGATTAACCTGCGGCTTTGCGTTGCGCACATATTACCACAATACCAATCAGCGCCAGGCCATCGCCACAAATGAACCTGCAGTTCGAACAAAACAAATTCTTCACCACTACAGTATTGGGCTCGCGAGGTGGGTCTTTTTATA  ATAGAGCAGCCATGGGGAGGCAGCGGGGAAATCGCAATTGCCAGTGTGGCGTATGTGTGTAACGGTGCGAATAGGGAAGCAAAGCACCGGGGCACCAAGATACGACGAGCGAGTACCGGACAGGGGACGGGACGACGCGCGAGAAGGCTAAGAGCTAAGTTACCAATTAGGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAAT                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX623275             [                                                                                                                                                                                                                                                               GCGTTGCGCACATATTACCNCAATACCAATCAGCGCCAGGCCATCGCCACAAATGAACCTGCAGTTCGAACAAAACAAATTCTTCACCACTACAGTATTGGGCTCGCGCGGTGGGTCTTTTTATAATATAGAGCAGCCATGGGGAGGCAGCGGGGAGATCGCAATTGCCAGTGCGGCGTATGTGTGTAACGGTGCGAATGGGGAAGCAAAGCACCGGGGCACCACGACACGACGAGCGAGTACCGGACAGGGGACGGGACGACGCGCGAGAAGGCTAAGAGCTAAGTTACCAATTAGGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAATTTGAAATTATTTCACAATCATCACATTTTAGTGATTGGCACAAAGATATTAGGCAGCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGCCCAGTGGTGGTGGTGCCGGTGGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTGTGTGAATGGTTGTGTGTGTGTGTGTGAGAGAGAGAGAAAGAATGAGAGAGAAAGAGTGAGAGAGAGAGAGAGAGAGAGAGAGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGTTTGCATGAGTTTGGCTGGCAGCATATGGAT]
[+] EMBL BM642605             [                                                                                                                                                                                                                                                                                                                                                                    ccgCGCGAGGTGGGTCTTTTTATA  ATAGAGCAGCCATGGGGAGGCAGCGGGGAAATCGCAATTGCCAGTGTGGCGTATGTGTGTAACGGTGCGAATAGGGAAGCAAAGCACCGGGGCACCAAGATACGACGAGCGAGTACCGGACAGGGGACGGGACGACGCGCGAGAAGGCTAAGAGCTAAGTTACCAATTAGGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAATTTGAAATTATTTCACAATCATCACATTTTAGTGATTGGCACAAAGATATTAGGCAGCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGCCCAGTGGTGGTGGTGCCGGTGGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTGTGTGAA        TGTATGTGTGTGAGAGAGAGAAAGAGAGTGAGAGAGAGAG                                                                                                                  ]


>consensus_8953#1 ATTCCCCACTGTCGTTCTTTCTCTCTTCACGCGCCCGCGCGCTCTCTCTCTCTCTCTATC TTCCTGTGCGAAAGTGGTTCGCGGGACAAACGGCCCGCCATGGCCGCCACGAATTGGAGT AGCCAAGTTTTATTTCTTTTTTTTTGCGGCCCCTGTCTAAGGGATAGTTAAGGTAGTACT TAAGGCTAATGCTAGACCCATTTCGCGCGTTGTGTTTTATCCTATGCAGTATTTTACCGA TTAACCTGCGGCTTTGCGTTGCGCACATATTACCACAATACCAATCAGCGCCAGGCCATC GCCACAAATGAACCTGCAGTTCGAACAAAACAAATTCTTCACCACTACAGTATTGGGCTC GCGAGGTGGGTCTTTTTATAATAGAGCAGCCATGGGGAGGCAGCGGGGAAATCGCAATTG CCAGTGTGGCGTATGTGTGTAACGGTGCGAATAGGGAAGCAAAGCACCGGGGCACCAAGA TACGACGAGCGAGTACCGGACAGGGGACGGGACGACGCGCGAGAAGGCTAAGAGCTAAGT TACCAATTAGGCAAAAAGGAGCGCGCGCAACTACTACTGCACACTGAAACATTACGAATC GTAATTTGAAATTATTTCACAATCATCACATTTTAGTGATTGGCACAAAGATATTAGGCA GCGTTTAGCAGGTAAGCAGGACGGCCCACCAGTCCACCGCCCAGTGGTGGTGGTGCCGGT GGTGCCGATGGTACAATTTTAATACAGGTCTGTGCGTGTGTGTGAATGGTTGTGTGTGTG TGTGTGAGAGAGAGAGAAAGAATGAGAGAGAAAGAGTGAGAGAGAGAGAGAGAGAGAGAG AGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGCAAGTACAGTTT GCATGAGTTTGGCTGGCAGCATATGGAT



consensusID : consensus_8953#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 893
fasta sequence
                              [CCGAAGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTGTTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCAGAGTCAGCAAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACCAACATATTATATACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTAGATGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATTTTTACAATAAGGATGTGAAGAAAGTGACTATTGGTATATACATACACATATACATTTATCTTATTATTCGCCAGGAAAGAGAGAGAGAGAGAGATAGAGTAGTGTGATGCGCGAAGGGGAAAAGAAACGAATCAGAAGAAAAAAAGAACACCGCAAAAGAGCGCATTAATATTAGGTGAAATTAATTGGTCGGATTTGGCGGCATTGGGGTTGTTTGCTGGTAGGAAAAAATGGATCTAAAAAAACAGAGGTAAAAGCTTAAAAACCCGTAACCAATTCGAGTGATTCAAACGAAAAAAGGCAGATAGAGCGTGCAGCCCACAGGACGGACAGAACAGTTAGTAACGGCGCAGTGAAGGGCGGATAGAGATTAATTAAACAACACAACAACAACAACAAAAAACACACACAGTTATCAAACTCTCTAGTAGATCAAACAAGAAAGAAGTAGAAAACAGGAAACGAAAAGGTACGAAATTCGCAAACGCGCGATATGGATGGACTTGTTTTTGGATTGAATAATAATGGTCAATGAGAGAAAGGCAACCAGAGAAATGAAATACACACAACAAGGACACACAAGACAAGACACC]

[+] EMBL BM647546             [CCGAAGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTGTTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCAGAGTCAGCAAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACCAACATATTATATACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTAGATGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATTTTTACAATAAGGATGTGAAGAAAGTGACTATTGGTATATACATACACATATACATTTATCTTATTATTCGCCAGGAAAGAGAGAGAGAGAGAGATAGAGTAGTGTGATGCGCGAAGGGGAAAAGAAACGAATCAGAAGAAAAAAAGAACACCGCAAAAGAGCGCATTAATATTAGGTGAAATTAATTGGTCGGATTTGGCGGCATTGGGGTTGTTTGCTGGTAGGAAAAAATGGATCTAAAAAAACAGAGGTAAAAGCTTAAAAACCCGTAACCAATTCGAGTGATTCAAACGAAAAAAGGCAGATAGAGCGTGCAGCCCACAGGACGGACAGAAC                                                                                                                                                                                                                                                                 ]
[+] EMBL BX607990             [                                                                                                                                                                                                                                                                                                                                                                                                                                         AACGAATCAGAAGAAAAAAAGAACACCGCAAAAGAGCGCATTAATATTAGGTGAAATTAATTGGTCGGATTTGGCGGCATTGGGGTTGTTTGCTGGTAGGAAAAAATGGATCT AAAAAACAGAGGTAAAAGCTTAAAAAACCGTAACCAATTCGAGTGATTCAAACGAAAAAAGGCAGATAGAGCGTGCAGCCCACAGGACGGACAGAACAGTTAGTAACGGCGCAGTGAAGGGCGGATAGAGATTAATTAAACAACACAACAACAACAACAAAAAACACACACAGTTATCAAACTCTCTAGTAGATCAAACAAGAAAGAAGTAGAAAACAGGAAACGAAAAGGTACGAAATTCGCAAACGCGCGATATGGATGGACTTGTTTTTGGATTGAATAATAATGGTCAATGAGAGAAAGGCAACCAGAGAAATGAAATACACACAACAAGGACACACAAGACAAGACACC]


>consensus_8953#2 CCGAAGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGG CGTGTTGACAGGGTTTAACAGAGCACAGAAGCGAGTGGACTGGATTGTAATGCAGAGTCA GCAAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACCAACATATTAT ATACAAAAACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATTA GATGATTTGTGATTTTATGTTAACTATATAATTTTGTATTATTACTTTTATTTACCTATT TTTACAATAAGGATGTGAAGAAAGTGACTATTGGTATATACATACACATATACATTTATC TTATTATTCGCCAGGAAAGAGAGAGAGAGAGAGATAGAGTAGTGTGATGCGCGAAGGGGA AAAGAAACGAATCAGAAGAAAAAAAGAACACCGCAAAAGAGCGCATTAATATTAGGTGAA ATTAATTGGTCGGATTTGGCGGCATTGGGGTTGTTTGCTGGTAGGAAAAAATGGATCTAA AAAAACAGAGGTAAAAGCTTAAAAACCCGTAACCAATTCGAGTGATTCAAACGAAAAAAG GCAGATAGAGCGTGCAGCCCACAGGACGGACAGAACAGTTAGTAACGGCGCAGTGAAGGG CGGATAGAGATTAATTAAACAACACAACAACAACAACAAAAAACACACACAGTTATCAAA CTCTCTAGTAGATCAAACAAGAAAGAAGTAGAAAACAGGAAACGAAAAGGTACGAAATTC GCAAACGCGCGATATGGATGGACTTGTTTTTGGATTGAATAATAATGGTCAATGAGAGAA AGGCAACCAGAGAAATGAAATACACACAACAAGGACACACAAGACAAGACACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8953#0      ATCGTACAAAATAAGTTGTAGTTTTGCGTGCAAATTAAATTAGTTTGTCTTTAATTTCGT 60
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      TGCCAGGAGCGTTTGATAAGGATTGTTACGGGGGAGGGGTTTGTAAGGAACGTGCGGAGG 120
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      AGTATGCTTTTTTTTTAAATGCTTGCTTTTGTGAATTTTTACTGCTTGAGATGATGATGA 180
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      TGGTGGCTAAGGTTGCGGTTTGCTGTAGTGTTATCAGCAGCAATTAAGGATTAAAAATGG 240
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      TGGAATTTTAGCCAACAAAACAATTGGATGAATACACTATTTTCCGTATCCGTTTGACAG 300
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      AACTGCTCCCCTAATTTTAAACTGTGATCGTTTTGAGTAACGATGGCGACATAAAAAGAG 360
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      AGAGAGAAAGCGAAAGAGAAAATGAGAGAAATCTGCTTCGTTTTTGGTGTGTGTACTACT 420
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      -----------------------------------ATTCCCCACTGTCGTTCTTTCTCTC 25
                                                                                  

consensus_8953#0      CAAACCATGGAATCGATTTTTATCCGTTTTTTCGATTACTGTTTTGACAGAGGTGCAGTA 480
consensus_8953#2      -------------------------------------------------------CCG-A 4
consensus_8953#1      TTCACGCGCCCGCGCGCTCTCTCTCTCTCTCTATCTTCCTGTGCGAAAGTGGTTCGCGGG 85
                                                                               *  

consensus_8953#0      AGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTG 540
consensus_8953#2      AGAGCAGAGCCAGGCTACTTAGGATAGATAGAAGTGGTTTATATGAGACAGGCCGGCGTG 64
consensus_8953#1      ACAAACGGCCCGCCATGGCCGCCACGAATTGGAGTAGCC---AAGTTTTATTTCTTTTTT 142
                      * *   *  **    *       *   ** * *** *     * *    *   *    * 

consensus_8953#0      TTGACAGGGTTTAAC-AGAGCACAGAAGCGAGTGGACTGGATTGTAATGC-AGAGTCAGC 598
consensus_8953#2      TTGACAGGGTTTAAC-AGAGCACAGAAGCGAGTGGACTGGATTGTAATGC-AGAGTCAGC 122
consensus_8953#1      TTTGCGGCCCCTGTCTAAGGGATAGTTAAGGTAGTACTTAAGGCTAATGCTAGACCCATT 202
                      **  * *    *  * *  * * **    *   * ***  *   ****** ***  **  

consensus_8953#0      AAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCACACCAACATATTAT 658
consensus_8953#2      AAGGATGATGCTCCAGATTTATTAGATCTATCCATAGACACATGCAC--CAACATATTAT 180
consensus_8953#1      TCGCGCGTTGTGTTTTATCCTATGCAGTATTTTACCGATTAACCTGCGGCTTTGCGTTGC 262
                        *   * **      **    *  *    *  *  **   *    *  *      **  

consensus_8953#0      ATACAAAA-ACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATT 717
consensus_8953#2      ATACAAAA-ACAAAACAAAAAAGCCGCGGAAGGAGAAGGAGCTGCATCATACTATATATT 239
consensus_8953#1      GCACATATTACCACAATACCAATCAGCGCCAGGCCATCGCCACAAATGAACCTGCAGTTC 322
                        *** *  ** * *  *  ** * ***  ***  *  *      ** *  **  *  * 

consensus_8953#0      AGATGATTTGTGATTTT-ATGTTAACTATAT-AATTTTGTATTATTACTTTTATTTACCT 775
consensus_8953#2      AGATGATTTGTGATTTT-ATGTTAACTATAT-AATTTTGTATTATTACTTTTATTTACCT 297
consensus_8953#1      GAACAAAACAAATTCTTCACCACTACAGTATTGGGCTCGCGAGGTGGGTCTTTTTATAAT 382
                        *  *       * ** *     **  ***     * *     *   * ** **    *

consensus_8953#0      ATTTTTACAATAAGGACGTGA--AGAAAGTGACTATTGGTATATACATACACATATACAT 833
consensus_8953#2      ATTTTTACAATAAGGATGTGA--AGAAAGTGACTATTGGTATATACATACACATATACAT 355
consensus_8953#1      AGAGCAGCCATGGGGAGGCAGCGGGGAAATCGCAATTGCCAGTGTGGCGTATGTGTGTAA 442
                      *      * **  *** *      * ** *  * ****  *         *  * *  * 

consensus_8953#0      TTATCTTATTATTCGCCAGGAAAG-AGAGAGAGAGAGAGATA-GAGTAGTGTGATGCGCG 891
consensus_8953#2      TTATCTTATTATTCGCCAGGAAAG-AGAGAGAGAGAGAGATA-GAGTAGTGTGATGCGCG 413
consensus_8953#1      CGGTGCGAATAG--GGAAGCAAAGCACCGGGGCACCAAGATACGACGAGCGAGTACCGGA 500
                         *   * **   *  ** **** *  * *  *   ***** **  ** * *   **  

consensus_8953#0      AAGGGGAAAAGA-AACGAATCAGAAGAAAAAAAG----------AACACCGCAAAAAGGA 940
consensus_8953#2      AAGGGGAAAAGA-AACGAATCAGAAGAAAAAAAG----------AACACCGCAAAA---- 458
consensus_8953#1      CAGGGGACGGGACGACGCGCGAGAAGGCTAAGAGCTAAGTTACCAATTAGGCAAAAAGGA 560
                       ******   **  ***    *****   ** **          **    ******    

consensus_8953#0      GCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAAT-TTGAAATTATTTCA 999
consensus_8953#2      GAGCGCATTAATATTAGGTGAAATTAATTGGTCGGATTTGGCGGCATTGGGGTTGTTTGC 518
consensus_8953#1      GCGCGCGCAACTACTACTGCACACTGAAACATTACGAATCGTAAT-TTGAAATTATTTCA 619
                      * ****   * ** **    * * * *    *      * *     ***   ** ***  

consensus_8953#0      CAATCATCACATTTTAGTG-ATTGGCACAAAGATATTAGGC-AGCGTTTAGCAGGTAAGC 1057
consensus_8953#2      TGGTAGGAAAAAATGGATCTAAAAAAACAGAGGTAAAAGCTTAAAAACCCGTAACCAATT 578
consensus_8953#1      CAATCATCACATTTTAGTG-ATTGGCACAAAGATATTAGGC-AGCGTTTAGCAGGTAAGC 677
                         *    * *  *   *  *     *** ** **  **   *       * *   **  

consensus_8953#0      AGGACGGCCCACCAGTCCACCGCCCAGTGGTG-GTGGTGCCGGTGGTGCCGATGGTACAA 1116
consensus_8953#2      CGAGTGATTCAAACGAAAAAAGGCAGATAGAGCGTGCAGCCCACAGGACGGACAGAACAG 638
consensus_8953#1      AGGACGGCCCACCAGTCCACCGCCCAGTGGTG-GTGGTGCCGGTGGTGCCGATGGTACAA 736
                       *   *   **   *   *  * *   * * * ***  ***    *  * **  * *** 

consensus_8953#0      TTTTAATACAGGTCTGTGCGTGTGTGTGAATGTATGTGTGTGTGAGAGAGAGAAAGAGAG 1176
consensus_8953#2      TTAGTA-ACGGCGCAGTGAA---GGGCGGATAGAGATTAATTAAACAACACAACAACAAC 694
consensus_8953#1      TTTTAATACAGGTCTGTGCGTGTGTGTGAATGGTTGTGTGTGTGTGTGTGAGAGAGAGAG 796
                      **   * ** *  * ***     * * * **     *   *           * *   * 

consensus_8953#0      AGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAGGGAGAGAGAGAGAGAGAAGAGAGA 1236
consensus_8953#2      AACAAAAAACACACACAGTTATCAAACTCTCTAGTAGATCAAACA-AGAAAGAAGTAGAA 753
consensus_8953#1      AAAGAATGAGAGAGAAAG--------------AGTGAG--------AGAGAGA-----GA 829
                      *   *   * * * * **              **            *** ***      *

consensus_8953#0      GAGAGAGAGAGAGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGC 1296
consensus_8953#2      AACAGGAAACGAAAAGGTACGAAATTCGCAAACGCGCGATATGGATGGACTTGTTTTTG- 812
consensus_8953#1      GAGAGAGAGAGAGAGAGTAAGTTAGGTGTTTAGGCGGTTAGTGGAGTTACCCATACCTGC 889
                       * **  *  ** *  *** *  *   *   * ***     ****   **   *   ** 

consensus_8953#0      AAGTACAGTTTGCATGAGTTTGGCTGGCAGCATATGGATACTGTAGTTTGATGTTGTCGA 1356
consensus_8953#2      -------GATTGAATAATAATGGTCAATGAGAGAAAGGCAAC-CAGAGAAATGAAATACA 864
consensus_8953#1      AAGTACAGTTTGCATGAGTTTGGCTGGCAGCATATGGAT--------------------- 928
                             * *** ** *   ***        * *  *                       

consensus_8953#0      AAGCGCGCGC-CGCGTGTGTCAAAATCGCTTGTGCACAGCAGGCGCGCGGTGGGTGGCAC 1415
consensus_8953#2      CACAACAAGGACACACAAGACAAGACACC------------------------------- 893
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      GGGCACGGCAGTTACGATGCTTTAAGTTGCGCGAGAAGAACAAACGTGTGGAGCAAAACC 1475
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      CGGATACCACTAGAACACTACGCCCCAGAAGAAGAAGAAAAAAACCCTAACACATCCATC 1535
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      GCAACCGACCAACCAACCAACCGGTAACGCCCATGTATTCAAAATTCCAAAAAAGGAAAC 1595
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      AAAAAACAAACAAACAAACAAACAAACTGCATTTTGCAAACAAAAAACTGTCTGACGTTC 1655
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      CTTAAATCATAGCTTTACCATTCGGGTGGTTTTTTTGTTGTTGTTGTTAAACGTATATAT 1715
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      ATTCGCAAAGCATAAGCAAAAATAGGCACATTTCAGGTAGTTTGTAGAGATAAATCGTNA 1775
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      GGGTTGTGCTTACTTAGGCATACGTAAGCTCGTNACACATCGTCTCCCACGACGAGGTGG 1835
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      NCGCCAATCTGTAGTGATGCTATCAATANAAATCGATACACTATGTACANNAAAAAAAAA 1895
consensus_8953#2      ------------------------------------------------------------
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#0      A 1896
consensus_8953#2      -
consensus_8953#1      -
                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)