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Anopheles gambiae
cluster # 8988 cluster # 8988       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8988#0 length = 997 sequences # 12  
consensus_8988#1 length = 650 sequences # 1  

consensusID : consensus_8988#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 997
fasta sequence
                              [CCGCCCACGCGCCCTTCGGTCCACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGTCGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG-CCCACTCCCGATCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAG-ATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG-GCACACTTTATCGTGCATCGCGGC-GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG-AAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC-TGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAATTTTCCCCCGAATAAAATGACCATAGCAAGT]

[+] EMBL BM586368             [CCGCCCACGCGTCCGTCGGTCCACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGTCGACAGGATAATAATTTAATTAATCTTTACCATTAACAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAATCGGGCCAGCGTTCACAGAGGCCCCACAAACGATGTGCCTCCGGCCATCGGCCCCACTCCCGATCTCGATCCGGAAATCAGCAAAAAGATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGACCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAATCGTAACTCTGAGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCAGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGACGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAGGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGC                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08HZ2             [           caCTTCGGTCCA CGGCAG CAAGCTGCTCCTGTGGGTTTTTGTGCCGTCGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG CCCACTCCCGATCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTAACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC TGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAATT                             ]
[+] EMBL CNS08PII             [             CTTCGGTCCACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGTCGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG CCCACTCCCGATCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC TGACGGTGGCCATGCTAGAGGAATGGAATCCTAAT                                                                            ]
[+] EMBL CNS096T5             [           gaCTTCTGAACACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGTCGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG CCCACTCCCGATCTCGATCCAAAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTAT                                                                                                                                                                                                                                                                          ]
[+] EMBL CNS0903Q             [            ctggCGGTCCACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGTCGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG CCCACTCCCGATCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAG ATGCAGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08HZ3             [                                                                              ATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTTACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGGCCCCACTCCCGTTCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTTACTCTGGGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTTTCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGGAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATTTTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCCTCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTTTCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC TGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAA TTTCCCCCGAATAAAATGA           ]
[+] EMBL CNS09B50             [                                                                                    CTCTACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG CCCACTCCCGATCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAGCATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAACTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGCAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAGCAAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAAC                                                                                                                                                                                                                          ]
[+] EMBL CNS08QWR             [                                                                                       TACCATTAATAAGTTGGAAACAATGTACAAGCTAGTCAGATGCACCACCACCCGACTGTTCACCCTGAACCGGGCCAACGTTCACAGAGGCCCCACAAACGATGTGCCACCGGCCATCGG CCCACTCCCGATCTCGATCCGGAAATCATCAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAAAAT ATGCAGCAACCGATCGATCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGTCGCACCACCATCGAGGCGCACATGCAAAATTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACG GCACACTTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTTACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC TGACGGTGGCCATGCTAGAGGAACGGAATCCTAATCTGCGTGTCGTGGCGAGTTAATtga                                                   ]
[-] EMBL CNS08QWS             [                                                                                                                                                                                             TGTGCC CCCGCCATCGGCCCCACTCCCGATCTCGATCCGGAAATCATAAAAAATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTTTGAGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGAAGAAGCGTCGCACCACCATCGAGGCGAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS08PIJ             [                                                                                                                                                                                                      GGCCATCGGCCCCACTCCCGTTCTCGATCCGGAAATCATCAAAAATAAACAGGAAGACAAAAAGCCTCTCCAGTGGCGCACACCGGACTCTGTTCGGCCGGACAGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTTACTTTGGGCTGGTGGAAAAG ATGCAGCAACCGATCGACCTCTCACCCTCGGCCATCCTGGAATGGTGGGAGAAGCGTCGCACCACCATCCAGGCGAACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGGGACGACATTGCCACGCGCACACTTTTTCGTGCATCGCGGCGGGATCCGTGCGATTCCGCGGAAGTGAAAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGGAAAGGTACGCTGCGACGGCATAACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCTTTTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTTTCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGGGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC TGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAATTTTCCCCCGAATAAAATGACCA        ]
[-] EMBL CNS096T6             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                G GCACAATTTATCGTGCATCGCGGC GGATCCGTGCGATTCCGCGGAAGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGC TGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAATTTTCCCCCGAATAAAATGATAATAGCAAGT]
[-] EMBL CNS0903R             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGGCATGG AAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAG AAGGTGGCACGGTTTGACGATTTGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGGTAAACTTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCGGCTTGAAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGCGTGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAA TTTCCCCCGAATAAAATGACCATAGCAgct]


>consensus_8988#0 CCGCCCACGCGCCCTTCGGTCCACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGT CGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCT AGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAGGCCC CACAAACGATGTGCCACCGGCCATCGGCCCACTCCCGATCTCGATCCGGAAATCATCAAA AATATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGTACTCTGATCGGCCGGAC AGCTTCTACAGCGCGTTCAAACTGTTCGCGTCGGAAAACCGTAACTCTGAGCTGGTGGAA AAGATGCAGCAACCGATCGACCTCTCACCGTCGGCCATCCTGGAATGGTGGCAGAAGCGT CGCACCACCATCGAGGCGCACATGCAAAAGTTTATCCCGGAGCGGCATGCCACCCTCGGG GACGACATTGCCACGGCACACTTTATCGTGCATCGCGGCGGATCCGTGCGATTCCGCGGA AGTGACAAATGGATTCAGAAAGATGAAGACGACGAGTACGACTTACCGCGGCACCACATC CCGGGCATGGTGCTGGAAGAGGTACGCTGCGACGGCATGACGCTCTTCTACGAAGGCATG GAAAACATCCAAAAGCTGCTCCGGCTGAAGCATCTGTCGTTCGAGAAGGTGGCACGGTTT GACGATTGGTATCTGGATCGGATCTCCGGCAACGTGCTGCCCTCGCTGGAGCGGCTAAAC TTGCGCGGGACGGCCGTTACCCACCGGGGGCTGAATTGTTTGTACCGTTTGCCCAGCTTG AAGGTGCTGCTGGTCGACGATCCAGAAAAGGACATACACTGGAAGCTGACGGTGGCCATG CTAGAGGAATGGAATCCTAATCTGCGTGTCGTGGCGAGTGAATGAATAGGGAAAGGAGAA TCGAAATTTTCCCCCGAATAAAATGACCATAGCAAGT



consensusID : consensus_8988#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 650
fasta sequence
                              [AGAATCGGCACGAGGTNTGCACGGATCCGCCGCGATGCACGACTAAAGTGTGCCGTGGCATGCCGCTCCGGGATAAACGTTCACAGAGTGCCCCACAAACGATGTGCCTCCGGCCATCGGCCCCACTCCCGATCTCGATCCGGAAATCAGCGAAAAGAGATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGGTACGTCCGATCGGCCGGACAGCTTCTACAGGCGGCGTTCAAACTGTTCGCGTCGGAAAAACCCGTAACTTCTTGAGCATGGTGGACACAGACGATGCAAACGAAAGCCCGAATTCGAAGCCTTCGTCGGCCGTTCNGGACCAATCCTTGGGAAATTGGGTGGGCCAGAAAGGCGGGTCGGCGAACCCAANCCAATTCNGAAGGGACGGCCACCCAATGTTGGCCCGGNCAAAGACGGTTTTTTAAGTTCCCCCTGGGAAAGGGCGGGGGGACACAATTTTGGCNCACAAGACACCGCGTTTCAGGAGGGGGGGAACNCGGGAACCCAAAGTTTTGGGCCCGTATCGCNGGGGGNAGAAGCGAAACGCGATTTTGAAGTTCCGCGGTTGGCCNAGTTTCTGGGACCGGGAGCCAGAGGAAAATATACCCCGAGTATGCGCGCAAGTATCACC]

[+] EMBL BX468717             [AGAATCGGCACGAGGTNTGCACGGATCCGCCGCGATGCACGACTAAAGTGTGCCGTGGCATGCCGCTCCGGGATAAACGTTCACAGAGTGCCCCACAAACGATGTGCCTCCGGCCATCGGCCCCACTCCCGATCTCGATCCGGAAATCAGCGAAAAGAGATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGGTACGTCCGATCGGCCGGACAGCTTCTACAGGCGGCGTTCAAACTGTTCGCGTCGGAAAAACCCGTAACTTCTTGAGCATGGTGGACACAGACGATGCAAACGAAAGCCCGAATTCGAAGCCTTCGTCGGCCGTTCNGGACCAATCCTTGGGAAATTGGGTGGGCCAGAAAGGCGGGTCGGCGAACCCAANCCAATTCNGAAGGGACGGCCACCCAATGTTGGCCCGGNCAAAGACGGTTTTTTAAGTTCCCCCTGGGAAAGGGCGGGGGGACACAATTTTGGCNCACAAGACACCGCGTTTCAGGAGGGGGGGAACNCGGGAACCCAAAGTTTTGGGCCCGTATCGCNGGGGGNAGAAGCGAAACGCGATTTTGAAGTTCCGCGGTTGGCCNAGTTTCTGGGACCGGGAGCCAGAGGAAAATATACCCCGAGTATGCGCGCAAGTATCACC]


>consensus_8988#1 AGAATCGGCACGAGGTNTGCACGGATCCGCCGCGATGCACGACTAAAGTGTGCCGTGGCA TGCCGCTCCGGGATAAACGTTCACAGAGTGCCCCACAAACGATGTGCCTCCGGCCATCGG CCCCACTCCCGATCTCGATCCGGAAATCAGCGAAAAGAGATACAGGAAGACAAAAAGCGT CTCCAGTGGCGCACACCGGTACGTCCGATCGGCCGGACAGCTTCTACAGGCGGCGTTCAA ACTGTTCGCGTCGGAAAAACCCGTAACTTCTTGAGCATGGTGGACACAGACGATGCAAAC GAAAGCCCGAATTCGAAGCCTTCGTCGGCCGTTCNGGACCAATCCTTGGGAAATTGGGTG GGCCAGAAAGGCGGGTCGGCGAACCCAANCCAATTCNGAAGGGACGGCCACCCAATGTTG GCCCGGNCAAAGACGGTTTTTTAAGTTCCCCCTGGGAAAGGGCGGGGGGACACAATTTTG GCNCACAAGACACCGCGTTTCAGGAGGGGGGGAACNCGGGAACCCAAAGTTTTGGGCCCG TATCGCNGGGGGNAGAAGCGAAACGCGATTTTGAAGTTCCGCGGTTGGCCNAGTTTCTGG GACCGGGAGCCAGAGGAAAATATACCCCGAGTATGCGCGCAAGTATCACC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8988#0      CCGCCCACGCGCCCTTCGGTCCACCGGCAGCCAAGCTGCTCCTGTGGGTTTTTGTGCCGT 60
consensus_8988#1      ------------------------------------------------------------
                                                                                  

consensus_8988#0      CGACAGGACAATAATTTAATTAATCTCTACCATTAATAAGTTGGAAACAATGTACAAGCT 120
consensus_8988#1      ---------------AGAATCGGCACGAGGTNTGCACGGATCCGCCGCGATGCACGA-CT 44
                                       ***            *  *    *  *   * *** ** * **

consensus_8988#0      AGTCAGAAGCACCACCACCCGACTGTCCACCCTGAACCGGGCCAACGTTCACAGAG-GCC 179
consensus_8988#1      A---AAGTGTGCCGTGGCATG-----CCGCTCCG----GGATAAACGTTCACAGAGTGCC 92
                      *   *   *  **    *  *     ** * * *    **   ************* ***

consensus_8988#0      CCACAAACGATGTGCCACCGGCCATCGGCCC-ACTCCCGATCTCGATCCGGAAATCATCA 238
consensus_8988#1      CCACAAACGATGTGCCTCCGGCCATCGGCCCCACTCCCGATCTCGATCCGGAAATCAGCG 152
                      **************** ************** ************************* * 

consensus_8988#0      AAAATA--TACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCG-TAC-TCTGATCGG 294
consensus_8988#1      AAAAGAGATACAGGAAGACAAAAAGCGTCTCCAGTGGCGCACACCGGTACGTCCGATCGG 212
                      **** *  ************************************** *** ** ******

consensus_8988#0      CCGGACAGCTTCTACAGC--GCGTTCAAACTGTTCGCGTCGGAAAA--CCGTAACTC--T 348
consensus_8988#1      CCGGACAGCTTCTACAGGCGGCGTTCAAACTGTTCGCGTCGGAAAAACCCGTAACTTCTT 272
                      *****************   **************************  ********   *

consensus_8988#0      GAGC-TGGTGGAAA-AGATGCAGCAACCGA----TCGACCTC----TCACCGTCGGCCAT 398
consensus_8988#1      GAGCATGGTGGACACAGACGATGCAAACGAAAGCCCGAATTCGAAGCCTTCGTCGGCCGT 332
                      **** ******* * *** *  **** ***     ***  **     *  ******** *

consensus_8988#0      CCTGGAATGGTGGCAGAAGCGTCGCACCA-CCATCGAGGCGCACATGCAAA---AGTTTA 454
consensus_8988#1      TCNGGACCAATCCTTGGGAAATTGGGTGGGCCAGAAAGGCGGGTCGGCGAACCCAANCCA 392
                       * ***    *    *     * *      ***   *****     ** **   *    *

consensus_8988#0      TCCCGGAGCGGCATGCCACCCTCGG--GGACGACATTGCCACGGCAC----ACTTTATCG 508
consensus_8988#1      ATTCNGAAGGGACGGCCACCCAATGTTGGCCCGGNCAAAGACGGTTTTTTAAGTTCCCCC 452
                         * **  **   *******   *  ** *         ****       * **   * 

consensus_8988#0      TGCATCGCGGCGGATCCGTGCGATTCCG-CGGAAGTGACAAATGGATTCAGAAAGATGAA 567
consensus_8988#1      TGGGAAAGGGCGGGGGGACACAATTTTGGCNCACAAGACACCGCGTTTCAGGAGGGGGGG 512
                      **      *****       * ***  * *  *   ****    * ***** * *  *  

consensus_8988#0      GACGACGAGTACGACTTACCGCGGCACCACATCCCGGGCATGGTGCTGGAAGAGGTACGC 627
consensus_8988#1      AACN-CGGGAACCCAAAGTTTTGGGCCCGTATCGCNGGG-----GGNAGAAGCGAAACGC 566
                       **  ** * **          **  **  *** * **      *   **** *  ****

consensus_8988#0      TGCGACGGCATGACGCTCTTCTACGAAGGCATGGAAAACATCCAAAAGCTGCTCCGGCTG 687
consensus_8988#1      GATTTTGAAGTTCCGCGGTTGGCCNAGTTTCTGGGA-----CCGGGAGCCAGAGGAAAAT 621
                            *   *  ***  **   * *     *** *     **   ***           

consensus_8988#0      AAGCATCTGTCGTTCGAGAAGGTGGCACGGTTTGACGATTGGTATCTGGATCGGATCTCC 747
consensus_8988#1      ATACCCCGAGTATGCGCGCAAGTATCACC------------------------------- 650
                      *  *  *     * ** * * **  ***                                

consensus_8988#0      GGCAACGTGCTGCCCTCGCTGGAGCGGCTAAACTTGCGCGGGACGGCCGTTACCCACCGG 807
consensus_8988#1      ------------------------------------------------------------
                                                                                  

consensus_8988#0      GGGCTGAATTGTTTGTACCGTTTGCCCAGCTTGAAGGTGCTGCTGGTCGACGATCCAGAA 867
consensus_8988#1      ------------------------------------------------------------
                                                                                  

consensus_8988#0      AAGGACATACACTGGAAGCTGACGGTGGCCATGCTAGAGGAATGGAATCCTAATCTGCGT 927
consensus_8988#1      ------------------------------------------------------------
                                                                                  

consensus_8988#0      GTCGTGGCGAGTGAATGAATAGGGAAAGGAGAATCGAAATTTTCCCCCGAATAAAATGAC 987
consensus_8988#1      ------------------------------------------------------------
                                                                                  

consensus_8988#0      CATAGCAAGT 997
consensus_8988#1      ----------
                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)