Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 8989 cluster # 8989       Sequences # 13       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8989#0 length = 966 sequences # 11  
consensus_8989#1 length = 805 sequences # 2  

consensusID : consensus_8989#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 966
fasta sequence
                              [GGAGATTGTCAGCAAATTTTCAAAACAATTGTCCCACAATCTAGCCATCGGCTCTCGGGGTTTTGTAAGCA-AAGTTTGTGTAG-TTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACC-GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG-G-AAGGCA-G-GGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA-GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA-TTGCTGGGTTGAA--GGGGATCATACAGGTAA--TTC-ACTA-GATA-GCAA-TACGTT-CGG-TCCCGT--CTCACTA-GGACTGGT-AACTGCCC-GGGCAACACA-GATCGT-TTGGCCACCATCCC-GC-TGG-CAACAGTTGCCCTCGA-CCGTACCAAA--GACGAGA-GA-GCCGATTGCGATGGGC-AAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATTAATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAACTTTAGATCCACCAACCAAGTTTGGGCTCTTCCGAAAGCTATCTTGTTAAATATATTTTTCATTTTTTTCCCTGTTAAAAAAA]

[+] EMBL CNS09AV6             [GGAGATTGTCAGCAAATTTTCAAAACAATTGTCCCACAATCTAGCCATCGGCTCTCGGGGTTTTGTAAGCA AAGTTTGTGTAG TTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG G AAGGCA G GGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAA GATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA TTGCTGGGTTGAA  GGGGATCATACAGGTAA  TTC ACTA GATA GCAA TACGTT CGG TCCCGT  CTCACTA GGACTGGT AACTGCCC GGGCAACACA GATCGT TTGGCCACCATCCC GC TGG CAACAGTTGCCCTCGA CCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGC AAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATTAATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAACTTTAGATCCACCAACCAAGTTTGGGCTCTTCCGAAAGCTATCTTGTTAAATATATTTTTCATTTTTTTCCCTGTTAAAAAAA]
[+] EMBL BM585232             [                   ccgAAACAATTGTCCCACAATCTAGCCATCGGCTCTCGGGGTTTTGTAAGCA AAGTTTGTGTAG TTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG G AAGGCA G GGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA TTGCTGGGTTGAA  GGGGATCATACAGGTAA  TTC ACTA GATA GCAA TACGTT CGG TCCCGT  CTCACTA GGACTGGT AACTGCCC GGGCAACACA GATCGT TTGG                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CNS09GYC             [                       AACAATTGT CCACAATCTAGCCATCGGCTCTCGGGGTTTTGTAAGCA AAGTTTGTGTAGTTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTGGACACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGTG G AAGGCA G GGCAATCTCATAATGCGGTT CCAACCTTCCTCAAATCGCTGCTGCTCGGTGT CCGGTCGGGGTCA CCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGATTATGTGTTCCTGTCACG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CNS09AV7             [                            TTGTCCCACAATCTAGCCATCGGCTCTCGGGGTTTTGTAAGCA AAGTTTGTGTAG TTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGAAACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG G AAGGCA G GGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCCACTGTGTTGGGTTTGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA TTGCTGGGTTGAA  GGGGATCATACAGGTAA  TTC ACTA GATA GCAA TACGTT CGG TCCCGT  CTCACTA GGACTGGT AACTGCCC GGGCAACACA GATCGT TTGGCCACCATCCC GC TGG CAACAGTTGCCCTCGA CCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGC AAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATTAATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAACTTTAGATCCACCAACCAAGTTTGGGCTCTTCCGAAAGCTATCTTGTTAAATATATT                          ]
[+] EMBL BM606837             [                               ccgCACAATCTAGCCATCGGCTCTCGGGGTTTTGTAAGCA AAGTTTGTGTAG TTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG G AAGGCA G GGCAATCTCATAATGCGGTTCCCAACCTTCCTCATATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA TTGCTGGGTTGAA  GGGGATCATACAGGTAA  TTC ACTA GATA GCAA TACGTT CGG TCCCGT  CTCACTA GGACTGGT AACTGCCC GGGCAACACA GATCGT TTGGCCACCATCCC GC TGG CAACAGTTGCCCTCGA CCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGC AAACGGCCGGCTGCA                                                                                                                                                                                                                      ]
[+] EMBL CNS093K8             [                                           aCCATCGGCTCTCGGGGTTTTGTAAGCACAAGTTTGTGTAG TTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCGCGCAAGGCAGG GGCAATCTCATAATGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM585896             [                                                                                           ccgCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG G AAGGCA G GGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA TTGCTGGGTTGAA  GGGGATCATACAGGTAA  TTC ACTA GATA GCAA TACGTT CGG TCCCGT  CTCACTA GGACTGGT AACTGCCC GCGCAACACA GATCGT TTGGCCACCATCCC GC TGG CAACAGTTGCCCTCGA CCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGCAAAACGGCCGGCTGC                                                                                                                                                                                                                       ]
[+] EMBL BX468865             [                                                                                                    aggcagaatCGGCACGTTNCGGACACACAGCAAACACGATNCAGCAATGACTAACCGTTAGACACTTGCACCTGAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGTG G AAGGCA GTGGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCGCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGATTATGTGTTCCTGTCACGCTGGGCCGTACGTAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCAGGGGAGATGTGATCTCCAGCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACATTTGCTGGGTTGAAGGGGGGATCATACAGGTCAGTTTCNACTAGGATAGGCAAGTACGTTACGGTTCCCGTTCCTCACTAGGGACTGGTAAACTGCCCGGGGCAACACAGGATCGTATTGGGCACCATCCCGGCTTGGCCAACAGTTGCCCTCGA CCGTACCAAAAGGACGAGAGGAGGCCG                                                                                                                                                                                                                                                  ]
[+] EMBL BX627218             [                                                                                                                                                                  CACTTGCACC GAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCG G AAGGCA G GGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCA GGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACA TTGCTGGGTTGAA  GGGGATCATACAGGTAA  TTC ACTA GATA GCAA TACGTT CGG TCCCGT  CTCACTA GGACTGGT AACTGCCC GGGCAACACA GATCGT TTGGCCACCATCCC GC TGG CAACAGTTGCCCTCGA CCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGC AAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATTAATAGAAGAATGTGTTCGCTTTTTTTTAAGGAGGAA TCAGAA                                                                                   ]
[-] EMBL CNS09GYD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          taACTA GAACT GT TACTGCCC GGGCAACACA GATCGT TT GCCACCATCCC GC TGG CAACAGTTGCCCTCGA CCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGC AAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAAT         AGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATTAATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAGCTTTAGATCCACCAACCAAGTTT GGCTCTTCCGAAAGCTATCTTGTTAAATA                              ]
[-] EMBL CNS093K9             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        T AACTGCCC  GGCAACACA GATCGT TTGGCCACCATCCC GC TGG CAACAGTTGCCCTCGAGCCGTACCAAA  GACGAGA GA GCCGATTGCGATGGGC AAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATAGCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATTAATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAACTTTAGATCCACCAACCAA TTT GGCTC TCCGAAAct                                            ]


>consensus_8989#0 GGAGATTGTCAGCAAATTTTCAAAACAATTGTCCCACAATCTAGCCATCGGCTCTCGGGG TTTTGTAAGCAAAGTTTGTGTAGTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGG ACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACA AACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCGGAAGGCAGGGCA ATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGG TCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGG CCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCA ACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGA AGATTATCAAACGCGTCGTCGCACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGC TACCGTACGTGACGGTCCCGGAAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATT CACTAGATAGCAATACGTTCGGTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACAC AGATCGTTTGGCCACCATCCCGCTGGCAACAGTTGCCCTCGACCGTACCAAAGACGAGAG AGCCGATTGCGATGGGCAAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATA GCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATT AATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAACTTTAGATCCACCAACC AAGTTTGGGCTCTTCCGAAAGCTATCTTGTTAAATATATTTTTCATTTTTTTCCCTGTTA AAAAAA



consensusID : consensus_8989#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 805
fasta sequence
                              [CCGCCCACGCGTCCGCCCACGCGTCCGCGGCTCTCGGGGTTTTGTAAGCAAAGTTTGTGTAGTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGGTACTGAGCGGAAGGCAGGGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGTAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATTCACTAGATAGCAATACGTTCGGTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACACAGATCGTTTGGCCACCAT-CCCGCTGGCAACAGTTG-CCCTCGACCGTACCAAAGACGAGAGAGCCGATTGCGATGGGCAAACNGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAACAATAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAA]

[+] EMBL BM591985             [CCGCCCACGCGTCCGCCCACGCGTCCGCGGCTCTCGGGGTTTTGTAAGCAAAGTTTGTGTAGTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGGTACTGAGCGGAAGGCAGGGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGTAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATTCACTAGATAGCAATACGTTCGGTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACACAGATCGTTTGGCCACCAT CCCGCTGGCAACAGTTG CCCTCGACCGTACCAAAGACGAGAGAGCCGATTGC                                                                                                ]
[+] EMBL BX627861             [                                                 AAAGTTTGTGTAGTTTTTAACCCAAAATTTCGTCATCCGGCAAGCCCCGGACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACAAACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCGGAAGGCAGGGCAATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGTAACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGACCCGACCCAGAAGATTATCAAACGCGTCGTCGCACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGGAAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATTCACTAGATAGCAATACGTTCGGTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACACAGATCGTTTGGNCACCATCCCCGCTGGCAACAGTTGCCCCTCGACCGTACCAAAGACGAGAGAGCCGATTGCGATGGGCAAACNGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAACAATAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAA]


>consensus_8989#1 CCGCCCACGCGTCCGCCCACGCGTCCGCGGCTCTCGGGGTTTTGTAAGCAAAGTTTGTGT AGTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGGACACACAGCAAACACGATGCA GCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACAAACACAATACACACCACTAGT CCACCTAGGGGAGCAGGGTACTGAGCGGAAGGCAGGGCAATCTCATAATGCGGTTCCCAA CCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGGTCACCCTGCTCGACTGTGTTG GGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGGCCCTGAATCCGGATGCCACCG TCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGTAACATGGACGTGCAGCGCGGGG ACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGAAGATTATCAAACGCGTCGTCG CACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGCTACCGTACGTGACGGTCCCGG AAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATTCACTAGATAGCAATACGTTCG GTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACACAGATCGTTTGGCCACCATCCC GCTGGCAACAGTTGCCCTCGACCGTACCAAAGACGAGAGAGCCGATTGCGATGGGCAAAC NGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAACAATAGCAGCAGCAGCAGTAGCAATC CAATAGGAGAAGTGCATTGACTGAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8989#0      GGAGATTGTCAGCAAATTTTCAAAACAATTGTCCCACAATCTAGCCATCGGCTCTCGGGG 60
consensus_8989#1      --------------------CCGCCCACGCGTCCGCCCACGCGTCCG-CGGCTCTCGGGG 39
                                          *    **   ****  * *     **  ************

consensus_8989#0      TTTTGTAAGCAAAGTTTGTGTAGTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGG 120
consensus_8989#1      TTTTGTAAGCAAAGTTTGTGTAGTTTTTAACCCAAAATTTCGTCATCCGGCAAGACCCGG 99
                      ************************************************************

consensus_8989#0      ACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACA 180
consensus_8989#1      ACACACAGCAAACACGATGCAGCAATGACTAACCGTTAGACACTTGCACCGAGGCTGACA 159
                      ************************************************************

consensus_8989#0      AACACAATACACACCACTAGTCCACCTAGGGGAGCAGGACACAGAGCGGAAGGCAGGGCA 240
consensus_8989#1      AACACAATACACACCACTAGTCCACCTAGGGGAGCAGGGTACTGAGCGGAAGGCAGGGCA 219
                      **************************************  ** *****************

consensus_8989#0      ATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGG 300
consensus_8989#1      ATCTCATAATGCGGTTCCCAACCTTCCTCAAATCCCTGCTGCTCGGTGTCCCGGTCGGGG 279
                      ************************************************************

consensus_8989#0      TCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGG 360
consensus_8989#1      TCACCCTGCTCGACTGTGTTGGGTATGTGGCACGGGTCGAAGGTGTTTCGATGCAGCCGG 339
                      ************************************************************

consensus_8989#0      CCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGCA 420
consensus_8989#1      CCCTGAATCCGGATGCCACCGTCACGGACTATGTGTTCCTGTCACGCTGGGCCGTGCGTA 399
                      ********************************************************** *

consensus_8989#0      ACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGA 480
consensus_8989#1      ACATGGACGTGCAGCGCGGGGACATCATCTCGCTCATCTCACCGAAGGATCCGACCCAGA 459
                      ************************************************************

consensus_8989#0      AGATTATCAAACGCGTCGTCGCACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGC 540
consensus_8989#1      AGATTATCAAACGCGTCGTCGCACTGCAGGGAGATGTGATCTCCACCCTAGGCTATAAGC 519
                      ************************************************************

consensus_8989#0      TACCGTACGTGACGGTCCCGGAAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATT 600
consensus_8989#1      TACCGTACGTGACGGTCCCGGAAGGACATTGCTGGGTTGAAGGGGATCATACAGGTAATT 579
                      ************************************************************

consensus_8989#0      CACTAGATAGCAATACGTTCGGTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACAC 660
consensus_8989#1      CACTAGATAGCAATACGTTCGGTCCCGTCTCACTAGGACTGGTAACTGCCCGGGCAACAC 639
                      ************************************************************

consensus_8989#0      AGATCGTTTGGCCACCATCCCGCTGGCAACAGTTGCCCTCGACCGTACCAAAGACGAGAG 720
consensus_8989#1      AGATCGTTTGGCCACCATCCCGCTGGCAACAGTTGCCCTCGACCGTACCAAAGACGAGAG 699
                      ************************************************************

consensus_8989#0      AGCCGATTGCGATGGGCAAACGGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAGCAATA 780
consensus_8989#1      AGCCGATTGCGATGGGCAAACNGCCGGCTGCAGTAGCCAGCAGTAGATCCGTTAACAATA 759
                      ********************* ******************************** *****

consensus_8989#0      GCAGCAGCAGCAGCAGCAGCAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAATT 840
consensus_8989#1      GCAGCAG------------CAGCAGTAGCAATCCAATAGGAGAAGTGCATTGACTGAA-- 805
                      *******            ***************************************  

consensus_8989#0      AATAGAAGAATGTGTTCGCTTTTTTTAAAGGAGGAATTCAGAACTTTAGATCCACCAACC 900
consensus_8989#1      ------------------------------------------------------------
                                                                                  

consensus_8989#0      AAGTTTGGGCTCTTCCGAAAGCTATCTTGTTAAATATATTTTTCATTTTTTTCCCTGTTA 960
consensus_8989#1      ------------------------------------------------------------
                                                                                  

consensus_8989#0      AAAAAA 966
consensus_8989#1      ------
                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)