These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8994#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1868 fasta sequence [CTTTTGGCCGATGG-AGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGGTATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTCACAGCTGTGAGCAAGTTTACAAACATGCTTACGAATAAAACCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT-AAATGCTACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCCCGAACATCGGCTCTCGAAGGCACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGC-AGAGTATAAC-CAGTGCATAAAAAAAATGTTAACAAAACGCGCGCTTTCTTTTCGCAATCCGATTCTAATCATTAGCGATTAATGTCTAAGAGCTTAGCTCATCCACTGCAGTGTGCCATCCTGCCCGAGAGTTGCCACACCGTTCGCCACCAACCGTAGTGCCTTCGGGTACGCCACGTGTTCCGATTGGTGAATGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGGCACGCGCTCCTGCAGGATGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCTTGTGTTCGGTGGCCACGNCCAGCACCATGCCGATGCCGCAGTTA] [+] EMBL CNS08IFF [CTTTTGGCCGATGGCAGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGGTATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTCGCAGCTGTGAGCAAGTGGAGAAACATGCTTACGAATAAAACCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT AAATGCTACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTTCCTGAGCTTCGATGGGATCGGGTAGGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCCCGAACATCGGCTCTCGAAGGCACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATG ] [+] EMBL CNS095KA [ tttttCGATGG AGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGGTATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTCACAGCTGTGAGCAAGTTTACAAACATGCTTACGAATAAAACCTTCCCAGTTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT ATATGCTACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTTGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAAAAGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCTCGAACATCGGCTCTCGAAGGCACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAA ] [-] EMBL CNS095KB [ AGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCATCAACTCCATTAACAGCTGTGAGCAAGTTTACAAACATGCTTACGAATAAAACCTTCCCAGTTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCAACACACGGCGGGGCGAATTATATAATAAAATG TACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCATACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACACACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGTTTTAACATCGGCTCTCGAAGGAACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGCGAGAGTATAACACAGTGCATAAAAAAAATG ] [-] EMBL CNS08IFG [ GTTTACAAACATGCTTACGAATAAAACCTTCCCAGCTGTTTGGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAAT AAATG TACCGCCTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAAGCTTACCTGAGGCTGGTGAAAAAGCTACACCCCGAAAGTGGCCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTTCGCAAACTGCAGGAAAAGTTTGCCAAAGCGCGCCGTGCCTTCGTGGAGGACCTGCGCGAGGAGGTGAAGGTGTACGACATCAAACAAACTGCCCCGCAGCACCGCCAGTACCTGAGCTTCGATGGGATCGGGTACGGAACGCCCGCCCAGCGCCAAAAGCAATACCAGACGGTGCGCGCCGCCAAAGCGCAGGAACGCGTGCCCGAACATCGGCTCTCGAAGGAACAAGCGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAATCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGAGGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATAAGTCACAAAACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCACGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTTAGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGC AGAGTATAA ] [-] EMBL BX618987 [ AGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGC AGAGTATAAC CAGTGCATAACTAAAATGTTAACAAAACGCGCGCTTTCTTTTCGCAATCCGATTCTAATCATTAGCGATTAATGTCTAAGAGCTTAGCTCATCCACTGCAGTGTGCCATCCTGCCCGAGAGTTGCCACACCGTTCGCCACCAACCGTAGTGCCTTCGGGTACGCCACGTGTTCCGATTGGTGAATGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGGGACGCGCTCCTGCAGGATGATTGCGCCCGTGTCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGAATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTAATCAGCGAACCCTTCCAGCGTTTCACGAATCCTTCGGAAAGGATGC ] [-] EMBL BX620778 [ TAGTGCTTTCGGGTATGCCACGTGTTCCGCTTGGTGAATGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGNCACGCGCTCCTGCAGGATGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCTGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCTTGTGTTCGGTGGCCACGNCCAGCACCATGCCGATGCCG ] [-] EMBL BX627636 [ CGCTCGGTAAGTGCTTCNTCGGTGTCGCNTCTTAGAATCGGCACGCGCTCCTGCAGGATGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGTCTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCTGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCA ] [-] EMBL BX606707 [ TCCCGCTCCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCGCATCAAACAGTTCCCTCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGGCCTTTGCCGCCCGTTCCAGCCCAAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCACCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACATCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCTGATTTTTTCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCTTGTGTTCGGTGGCCACGACCAGCACCATGCCGATGCCGCAGTTA] [-] EMBL BX612178 [ CCGCTGCGCATGAATACCCTTGTGGCGGGGCAGCAGCGCCGGATGAATGTTATTCAGCGAACCCTTCCAGCGTTTCACGAATCCTTCGGAAAGGATGCGCATAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCCCCTTg ] [-] EMBL BX613687 [ GCCGGCCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTTCGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTCCCGAGCCGGATATGAGTACGGCGATCCGTTTCT ] consensusID : consensus_8994#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 780 fasta sequence [GCAGATTCGCCCCCGAGGTACATGGCAGTGTGATATAATATTGTGCAATATTAGCGATAATCATTCAGAACCACTTTGTGCTATTATCAACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGTGATGGTCCACACACTGGCTGGNGNGCTGAATTATATAATAACATGCTACCTGCTTGCTGGGTGTAAATGAACAGTCCTGACCAGAACACTGGTCCTGGCAGGCTTACCTGACTGCTGGTGAAAAAGCTACACCCCTGACAGTGGCCAACCGNGAATGCGAGCTGCTGNGAACTGATTCCATGTGAACGTGNGACATGCTGCCTTTCGCATACTGCAGTGANAACACGTTTGCCAAAGCGCTGCCTGTTGGCATCGTGGAGTGACCTGCGTGAGTGAGGTGAAGTGTGTACTGACATCAAACACACTGGCCCGCAGCACCTGCAGTACCTGAGCTTCGATGGGATCGGGTACTNGAACTGCCCNGCCCAGCTGCCAAAAGCAATACCAGACGGTGCGCTGCCTGCAAAGCTGCAGGAACGCTGTGCTCGAACTATCTGGCTCTCGAAGTGCGCAATGCTGACCGAAACGGTGGTTCATGNATGAAGGGCCGGACGTACTTTACCGACCGGCCCGCCCTCCGCCCCCCCCGCTNCCGNGCCTTACCGCNCTCCGGCTGCTCGCTCGNCNNGGGCACTCCTCGGNG] [+] EMBL AL931385 [GCAGATTCGCCCCCGAGGTACATGGCAGTGTGATATAATATTGTGCAATATTAGCGATAATCATTCAGAACCACTTTGTGCTATTATCAACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGTGATGGTCCACACACTGGCTGGNGNGCTGAATTATATAATAACATGCTACCTGCTTGCTGGGTGTAAATGAACAGTCCTGACCAGAACACTGGTCCTGGCAGGCTTACCTGACTGCTGGTGAAAAAGCTACACCCCTGACAGTGGCCAACCGNGAATGCGAGCTGCTGNGAACTGATTCCATGTGAACGTGNGACATGCTGCCTTTCGCATACTGCAGTGANAACACGTTTGCCAAAGCGCTGCCTGTTGGCATCGTGGAGTGACCTGCGTGAGTGAGGTGAAGTGTGTACTGACATCAAACACACTGGCCCGCAGCACCTGCAGTACCTGAGCTTCGATGGGATCGGGTACTNGAACTGCCCNGCCCAGCTGCCAAAAGCAATACCAGACGGTGCGCTGCCTGCAAAGCTGCAGGAACGCTGTGCTCGAACTATCTGGCTCTCGAAGTGCGCAATGCTGACCGAAACGGTGGTTCATGNATGAAGGGCCGGACGTACTTTACCGACCGGCCCGCCCTCCGCCCCCCCCGCTNCCGNGCCTTACCGCNCTCCGGCTGCTCGCTCGNCNNGGGCACTCCTCGGNG] consensusID : consensus_8994#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 633 fasta sequence [GCAGAATCGCCACGAGNTNNCATGAACAACTTTGCGCTATCATCAGCATCAACTCCATTACACAGCTGTGAGCAAGTTTACAAACATGCTTACGTAATAAAACCTTCCCAGCTGTTTCGCTGGGTGCAGGCACTTATGGGGAAGCGTCTTATCTGCTTCAGCGATGGATCCACGACGAGCAGGCAGGGGCCGAATTATATAATAAATGCTACCGACCTGACTGGGTGTAAATGANACAGTCCGACCATGAAGCACGGTCCTGGCANAGCTTACCTGACGCTGGTGAAGAGATAGCTACTACCCCGACAGTGGGCACCCGGAAGCTGAGCGCGGAAGCGATTCCAGGAAGTGGACANGGGCCTTTCGCATACTTGCAGGNAAAGTCTGCCAATAGCGCGCCGTGGCACTCGCGGAGGACCTGCTGCGAGGAGGTGAAGGTGTACGAGATCGAAGACATCGACTGGACCCGAAGCGACCGGCCAGTACCTGAGACTTCGATGGGATCAGGGTACGGAAGCGCACCGGCCCAGANGCCTAAGAAGCAATACCAGACGAGATGNCGCGCACGCGAAAGCGCAGGGAACAGCGTGCTACGAACCAGTCGGGNTACTCGGAAGGCACAAGGCGACCGAA] [+] EMBL BX467264 [GCAGAATCGCCACGAGNTNNCATGAACAACTTTGCGCTATCATCAGCATCAACTCCATTACACAGCTGTGAGCAAGTTTACAAACATGCTTACGTAATAAAACCTTCCCAGCTGTTTCGCTGGGTGCAGGCACTTATGGGGAAGCGTCTTATCTGCTTCAGCGATGGATCCACGACGAGCAGGCAGGGGCCGAATTATATAATAAATGCTACCGACCTGACTGGGTGTAAATGANACAGTCCGACCATGAAGCACGGTCCTGGCANAGCTTACCTGACGCTGGTGAAGAGATAGCTACTACCCCGACAGTGGGCACCCGGAAGCTGAGCGCGGAAGCGATTCCAGGAAGTGGACANGGGCCTTTCGCATACTTGCAGGNAAAGTCTGCCAATAGCGCGCCGTGGCACTCGCGGAGGACCTGCTGCGAGGAGGTGAAGGTGTACGAGATCGAAGACATCGACTGGACCCGAAGCGACCGGCCAGTACCTGAGACTTCGATGGGATCAGGGTACGGAAGCGCACCGGCCCAGANGCCTAAGAAGCAATACCAGACGAGATGNCGCGCACGCGAAAGCGCAGGGAACAGCGTGCTACGAACCAGTCGGGNTACTCGGAAGGCACAAGGCGACCGAA] consensusID : consensus_8994#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 562 fasta sequence [AGAATCCCCGAGGTTTGTGCTATTATCACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAATAAATGCTACCGCTTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAGGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTATCGCATACTGCACGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGNAGGACCTGCGGTGAGGAGGTGAACGGTGTACGACATCAACANCACACTGCCCGCAGACACCGGCCAGTACCTGAGCTTCGACTGGGCGACTCGGGTAACGGAAACGCCCGACCAGACGCCNAAAAGCAATACCAGAACGGTGCGCAGCCGGCCAAAGGCCGCAGCGAANCGGCGTGCTCCGAACATNCGNACTACTCGA] [+] EMBL AL696088 [AGAATCCCCGAGGTTTGTGCTATTATCACATCAACTCCATTCACGGCTGTGAGCAAGTTTGCAAACATGCTTACGAATAAAAGCTTCCCAGCTGTTTCGCTGGTGCAGCATTATGGGAGCTCTTTCTGCTTCAGGATGGTCCACACACGGCGGGGCGAATTATATAATAAATGCTACCGCTTGCTGGGTGTAAATGAACAGTCCGACCAGAACACGGTCCGGCAGGCTTACCTGACGCTGGTGAAAAAGCTACACCCCGACAGTGGCACCCGGAAGCGAGCGCGGAACGATTCCAGGAAGTGGACAGCGCCTTATCGCATACTGCACGGAAAAGTTTGCCAAAGCGCGCCGTGGCATCGTGGNAGGACCTGCGGTGAGGAGGTGAACGGTGTACGACATCAACANCACACTGCCCGCAGACACCGGCCAGTACCTGAGCTTCGACTGGGCGACTCGGGTAACGGAAACGCCCGACCAGACGCCNAAAAGCAATACCAGAACGGTGCGCAGCCGGCCAAAGGCCGCAGCGAANCGGCGTGCTCCGAACATNCGNACTACTCGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_8994#0 CTTTTGGCCGATGGAGCATTTGATGTTGCTATTAACCTTCCCAAACCATGGCAAGTGTGG 60 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ---------------------------GCAGATTCGCCCCCGAGGTACATGGCAGTGTGA 33 consensus_8994#0 TATAATATTGTGCAATATTAGCGATAATCATTCAGAACAACTTTGCGCTATTATCAGCAT 120 consensus_8994#2 -----------GCAGAATCGCCACGAGNTNNCATGAACAACTTTGCGCTATCATCAGCAT 49 consensus_8994#3 -----------------------AGAATCCCCGAGG-----TTTGTGCTATTATCA-CAT 31 consensus_8994#1 TATAATATTGTGCAATATTAGCGATAATCATTCAGAACCACTTTGTGCTATTATCAACAT 93 * * **** ***** **** *** consensus_8994#0 CAACTCCATT-CACAGCTGTGAGCAAGTTTACAAACATGCTTACG-AATAAAACCTTCCC 178 consensus_8994#2 CAACTCCATTACACAGCTGTGAGCAAGTTTACAAACATGCTTACGTAATAAAACCTTCCC 109 consensus_8994#3 CAACTCCATT-CACGGCTGTGAGCAAGTTTGCAAACATGCTTACG-AATAAAAGCTTCCC 89 consensus_8994#1 CAACTCCATT-CACGGCTGTGAGCAAGTTTGCAAACATGCTTACG-AATAAAAGCTTCCC 151 ********** *** *************** ************** ******* ****** consensus_8994#0 AGCTGTTTCGCTGG-TGCAG-CA-TTATGGGA----GCTCTTTCTGCTTCAG-GATGG-T 229 consensus_8994#2 AGCTGTTTCGCTGGGTGCAGGCACTTATGGGGAAGCGTCTTATCTGCTTCAGCGATGGAT 169 consensus_8994#3 AGCTGTTTCGCTGG-TGCAG-CA-TTATGGGA----GCTCTTTCTGCTTCAG-GATGG-T 140 consensus_8994#1 AGCTGTTTCGCTGG-TGCAG-CA-TTATGGGA----GCTCTTTCTGCTTCAGTGATGG-T 203 ************** ***** ** ******* * * ********** ***** * consensus_8994#0 CCACACACGGC------GGGGCGAATTATATAATAA-ATGCTACCG-CCTG-CTGGGTGT 280 consensus_8994#2 CCACGACGAGCAGGCAGGGGCCGAATTATATAATAA-ATGCTACCGACCTGACTGGGTGT 228 consensus_8994#3 CCACACACGGC------GGGGCGAATTATATAATAA-ATGCTACCG-CTTG-CTGGGTGT 191 consensus_8994#1 CCACACACTGGCTG-GNGNGCTGAATTATATAATAACATGCTACCTGCTTG-CTGGGTGT 261 **** * * * ************** ******** * ** ******** consensus_8994#0 AAATGAA-CAGTCC-GACCA--GAACAC-GGTCC-GGCAA-GCTTACCTGAC-GCTGGTG 332 consensus_8994#2 AAATGANACAGTCC-GACCATGAAGCAC-GGTCCTGGCANAGCTTACCTGAC-GCTGGTG 285 consensus_8994#3 AAATGAA-CAGTCC-GACCA--GAACAC-GGTCC-GGCAG-GCTTACCTGAC-GCTGGTG 243 consensus_8994#1 AAATGAA-CAGTCCTGACCA--GAACACTGGTCCTGGCAG-GCTTACCTGACTGCTGGTG 317 ****** ****** ***** * *** ***** **** *********** ******* consensus_8994#0 AAAA---AGCTAC-ACCCCGACAGTGGCCACCCGGAAGC--GAGC-GC--GGAA-CGATT 382 consensus_8994#2 AAGAGATAGCTACTACCCCGACAGTGGGCACCCGGAAGCT-GAGC-GC--GGAAGCGATT 341 consensus_8994#3 AAAA---AGCTAC-ACCCCGACAGTGG-CACCCGGAAGC--GAGC-GC--GGAA-CGATT 292 consensus_8994#1 AAAA---AGCTACACCCCTGACAGTGGCCAACCGNGAATGCGAGCTGCTGNGAACTGATT 374 ** * ****** *** ******** ** *** * **** ** *** **** consensus_8994#0 CCA---GGAAGTGG-ACA-GCG-CCTTTCGCATACT-GCAGGAAAA---GTTTGCCAA-A 431 consensus_8994#2 CCA---GGAAGTGG-ACA-NGGGCCTTTCGCATACTTGCAGGNAAA---GTCTGCCAATA 393 consensus_8994#3 CCA---GGAAGTGG-ACA-GCGCCTTATCGCATACTGCACGGAAAA---GTTTGCCAA-A 343 consensus_8994#1 CCATGTGAACGTGNGACATGCTGCCTTTCGCATACTGCAGTGANAACACGTTTGCCAA-A 433 *** * * *** *** * * ********* * ** ** ****** * consensus_8994#0 GCGC-GCCG--TGGCA-TCGTGGAG-GACCTGC-GCGAG-GAGGTGAA-GGTGTAC-GAC 482 consensus_8994#2 GCGC-GCCG--TGGCACTCGCGGAG-GACCTGCTGCGAG-GAGGTGAA-GGTGTAC-GAG 446 consensus_8994#3 GCGC-GCCG--TGGCATCGTGGNAG-GACCTGCGGTGAG-GAGGTGAACGGTGTAC-GAC 397 consensus_8994#1 GCGCTGCCTGTTGGCA-TCGTGGAGTGACCTGC-GTGAGTGAGGTGAAGTGTGTACTGAC 491 **** *** ***** * ** ******* * *** ******** ****** ** consensus_8994#0 ATCAA--ACACACTGCC-----CCGCAGCACC--GCCAGTACCTGAG-CTTCGATGGGA- 531 consensus_8994#2 ATCGA--AGACATCGACTGGACCCGAAGCGACCGGCCAGTACCTGAGACTTCGATGGGA- 503 consensus_8994#3 ATCAACANCACACTGCC------CGCAGACACCGGCCAGTACCTGAG-CTTCGACTGGGC 450 consensus_8994#1 ATCAA--ACACACTGGC-----CCGCAGCACCT--GCAGTACCTGAG-CTTCGATGGGA- 540 *** * *** * * ** ** * *********** ****** ** consensus_8994#0 ---TC-GGGTACGGAA---CGCCCGCCCAG-CGCC--AAAAGCAATACCAGACGGT---G 578 consensus_8994#2 ---TCAGGGTACGGAAGCGCACCGGCCCAGANGCCTAAGAAGCAATACCAGACGAGATGN 560 consensus_8994#3 GACTCGGGTAACGGAAA--CGCCCGACCAGACGCCN-AAAAGCAATACCAGAACGGTGCG 507 consensus_8994#1 ---TC-GGGTACTNGAACTGCCCNGCCCAGCTGCC--AAAAGCAATACCAGACGGT---G 591 ** ** ** * ** * **** *** * ************* consensus_8994#0 CGCGC-CGCCAAAG--CGCAG-GAAC--GCGTGCC-CGAAC--ATCGGCTCTC---GAAG 626 consensus_8994#2 CGCGCACGCGAAAG--CGCAG-GGAACAGCGTGCTACGAACCAGTCGGGNTACTCGGAAG 617 consensus_8994#3 CA-GCCGGCCAAAGGCCGCAGCGAANCGGCGTGCTCCGAAC-ATNCGNACTACTCGA--- 562 consensus_8994#1 CGCTGCCTGCAAAG-CTGCAG--GAACGCTGTGCT-CGAACTATCTGGCTCTC--GAAGT 645 * **** **** * **** ***** * * consensus_8994#0 GCACAA-G-CGACCGAAACGGCTGTTATGAAGAAGGGCGACTACTTTAAGAAGCACGAAA 684 consensus_8994#2 GCACAA-GGCGACCGAA------------------------------------------- 633 consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 GCGCAATGCTGACCGAAACGGTGGTTCATGNATGAAGGGCCGGACGTACTTTACC---GA 702 consensus_8994#0 TCAAAACCAAGTACGGCTACGATCGTGTCGTCGAGGATCTGATCCAGGAAGCGATCTCGA 744 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 CCGGCCCGCCCTCCGCCCCCCCCGCTNCCGNGCCTTACCGCNCTCCGGCTGCTCGCTCGN 762 consensus_8994#0 GGGGAGATTTCAGCAATCTGTCCGGGTTTGGCAAACCCCTGCCTGACCATCAGTCACAAA 804 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 CNNGGGCACTCCTCGGNG------------------------------------------ 780 consensus_8994#0 ACCCGTACGTGGACTTTACCACGCACAAGATGAACAAGATCATGCTCGACAATGGGTTCA 864 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CGCTAGGCAATCGACGGCGAAAACGACACAAACTGATGCCACCCATAGGTCAAGTGTTTT 924 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 AGGTTTTATTGGTTCATTGTTTAGTTGAGTGTACTGTTGTAAGTGCAGAGTATAACCAGT 984 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 GCATAAAAAAAATGTTAACAAAACGCGCGCTTTCTTTTCGCAATCCGATTCTAATCATTA 1044 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 GCGATTAATGTCTAAGAGCTTAGCTCATCCACTGCAGTGTGCCATCCTGCCCGAGAGTTG 1104 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CCACACCGTTCGCCACCAACCGTAGTGCCTTCGGGTACGCCACGTGTTCCGATTGGTGAA 1164 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 TGCGCTCGGTAAGTGCTTCCTCGGTGTCGCCTCTTAGAATCGGCACGCGCTCCTGCAGGA 1224 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 TGATTGCGCCCGTATCAACGCCTTCATCCACAAAGTGAACCGTACAGCCCGATTCAACGT 1284 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CTCCCGCCTCGAGCGCCTGCCGCTGCGCATGGATACCCTTGTGGCGGGGCAGCAGCGCCG 1344 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 GATGAATGTTAATCAGCGAACCCTTCCAGCGCTTGACGAATCCTTCGGAAAGGATGCGCA 1404 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 TAAAGCCGGCCAGACACACAAGCTCGATGCGTTCCTGCTCGAGCACCTTAGACACGGCCG 1464 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CATCAAACAGTTCCCGCGTGTTGTAGTCTTTGTGCAGGATAACTTTCGAAGGAATGCCGG 1524 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CCTTTGCTGCCCGTTCCAGCCCGAAGACGCCCGCCTTGTTCGACACCACCATCACAATTT 1584 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CGCCCCGAATGCCAAAGATCGAACTGCGGGTGGCATCGATCAGTGCCTGGAGGTTGCTTC 1644 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 CCGAGCCGGATATGAGTACGGCGATCCGTTTCTTCGGCAGCGAGCACGTAATCTGCGACA 1704 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 TCCGCAGCGTATCCTCGAACCCCTGCACGATGACACGCTGACCGAGGGGGTCCGATTTTT 1764 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 TCACCACCGTACCGAGAGCCGTTCCACCCGCGCTGCGTAGACGCTGCAGCACGGTGTGCT 1824 consensus_8994#2 ------------------------------------------------------------ consensus_8994#3 ------------------------------------------------------------ consensus_8994#1 ------------------------------------------------------------ consensus_8994#0 TGTGTTCGGTGGCCACGNCCAGCACCATGCCGATGCCGCAGTTA 1868 consensus_8994#2 -------------------------------------------- consensus_8994#3 -------------------------------------------- consensus_8994#1 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||