These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9003#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1306 fasta sequence [ACGCTGTTTACATCTTACAAACCCGCTACCGAACGATAGAAACAAAAACAGAACAGCTTCTTCCTTATCTGACGAGAGTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGTCAGGGACGGT-CGGAGGAGGTACTGGGACGGGCGCTACGCGCCATCCCACGGGCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAAGCTT-GCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAGCGCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGCCACGGGATGGGGCTGCTAACGAACGGTGGCCCACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAA-CGGCA-CTTACTGCAAGCGGGAGGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATGCGCTACAAATGCCCGGTCCGGCAACGTTTCTGGCCGGCATGCAGACGCCCGTGCTGGTGCAGATCAATCTGGACGCTTACTTCGAGGGGCTGTCAGAGAAGGAGGCGGACGTTTTGAGCTATTTGAAGGAGCGCGTTTTCCCAAAGGTGGAGAATAAACACTGGGAAGGCGTTGGGCTGCAGCAATACCGAGCCGCCATGAAGCAAGCGCAACTGTAGCCGAACATATGAACTCCCCTCCCCCCATCCAAGTCGGCTACGACGGCTGGAGTGATGTATTTCAGCAACGGGCTTTTTTTTTCTTCTATTTCCTTTCAAATAAA] [+] EMBL BX619901 [ACGCTGTTTACATCTTACAAACCCGCTACCGAACGATAGAAACAAAAACAGAACAGCTTCTTCCTTATCTGACGAGAGTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGTCAGGGACGGTGCGG ] [+] EMBL CNS09LP2 [ AAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGTCAGGGACGGT CGGAGGAGGTACTGGGACGGGCGCTACGCGCAATCCCACGGGCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAA CTT GCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAG GCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGCCACGGGATGGGGCTGCTAACGAACGGTGGCCCACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAA CGGCA CTTACTGCAAGCGGGAGGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATGCGCTACAAATGCCCGGTCCGGCAACGTTTCTGGCCGGCATGCAGACGCCCGTGCTGGTGCAGATCAATCTGGACGCTTACTTCGAGGGGCTGTCAGAGAAGGAGGCGGA ] [+] EMBL BX629261 [ CTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGTCAGGGACGGT CGGAGGAGGTACTGGGACGGGCGCTACGCGCCATCCCACGGGCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAAGCTT GCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAGCGCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGNCACGGGATGGGGCTGCTAACGAACGGTGGGCCACAGCCGTGGCATCCGGCCGAT ] [+] EMBL BX629153 [ ACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGTCAGGGACGGT CGGAGGAGGTACTGGGACGGGCGCTACGCGCCATCCCACGGGCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAAGCTT GCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAGCGCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGNCACGGGATGGGGCTGCTAACGAACGGTGGGCCACAGCCGTGGCATCCGGCCGATCGGC ] [-] EMBL CNS09LP3 [ GCCTTACCACGGGCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGGGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAAGCTT GCAGCTGCTCGGGCTCAACTTTCTCGTTGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAGCGCTGCGGGCGGAAGGGAAAGTACGCTTAATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCAACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGCCACGGGATGGGGCTGCTAACGAACGGTGGCCCACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAAGCGGCAGCGTACTGCAAGCGGGAGGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATGCGCTACAAATGCCCGGTCCGGCAACGTTTCTGGCCGGCATGCAAACGCCCGGGCTGGTGCAGATCAATCTGGACGCTTACTTCGAGGGGCTGTCAGAGAAGGAGGCGGACGTTTTGAGCTATTTGAAGGAGCGCGTTTTCCCAAAGGTGGAGAATAAACACTGGGAAGGCGTTGGGCTGCAGCAATACCGAGCCGCCATGAAGCAAGCGCAACTGTAGCCGAACATATGAACTCCCCTCCCCCCATCCAAGTCGGCTACGACGGCTGGAGTGATGTATTTCAGCAACGGGCTTTTTTTTTCTTCTATTTCCTTTCAAATAAA] [+] EMBL CNS096CD [ CGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGA CTTGGCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAG GCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGCCACGGGATGGGGCTGCTAACGAACGGTGGCCCACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAA CGGCA CTCACTGCAAGCGG ] consensusID : consensus_9003#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 927 fasta sequence [GGCAGAATTCCNGCACGATGTGAGATGAAAGCTTGGCATGTGAGTCGAAAGGAGAAAGAGCCATCAGTATCGAATGTTTGACCATCAACCGCTGTTGGCCGATCTTTAAATAATACCAATTAATGCTCTTATCGTTGGAATGTTGACAGAACAGAACAGCTTCTTCCTTATCTGACGAGAGTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGG-CGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAAGCTACATCGAGCACCGCCCCTACTACGGTCAGGGACGGTCGGAGGAGGTACTGGGGACGGGCGCTACGCGCCATCCCACGGGCGGNTTACTACGTGGNCACGAAAGTGAGCCGTTTACGAGGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCACAAAGACGCGCCAGGAGTGTCGAGCGAAAGGCTTGCAGACTGCTNCGGGCGTCGACTTATCTCGATGTGGTTGCCAAAGTCCAACGAAAGTACNGAAGGTTTTGAGCCAAACCTGGACATTGTGGCTTGANANCAGNAAAACNGNCTTGCCGAACAGCTGGAAAAGCGNACTATGGACGCNGGACNGGGAAAAGGGGAAAAGANNTAACCGGCTGTTCCATTTGGGGCGGNTTTACACGGGCCCTTATTTACAGGGTTCCGCGTNTGGTGTTNTGGCNGGGGAGAAANTCATTTAAGCCGGAAAAAG] [+] EMBL BX467966 [GGCAGAATTCCNGCACGATGTGAGATGAAAGCTTGGCATGTGAGTCGAAAGGAGAAAGAGCCATCAGTATCGAATGTTTGACCATCAACCGCTGTTGGCCGATCTTTAAATAATACCAATTAATGCTCTTATCGTTGGAATGTTGACAGAACAGAACAGCTTCTTCCTTATCTGACGAGAGTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGG CGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGGCAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAAGCTACATCGAGCACCGCCCCTACTACGGTCAGGGACGGTCGGAGGAGGTACTGGGGACGGGCGCTACGCGCCATCCCACGGGCGGNTTACTACGTGGNCACGAAAGTGAGCCGTTTACGAGGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCACAAAGACGCGCCAGGAGTGTCGAGCGAAAGGCTTGCAGACTGCTNCGGGCGTCGACTTATCTCGATGTGGTTGCCAAAGTCCAACGAAAGTACNGAAGGTTTTGAGCCAAACCTGGACATTGTGGCTTGANANCAGNAAAACNGNCTTGCCGAACAGCTGGAAAAGCGNACTATGGACGCNGGACNGGGAAAAGGGGAAAAGANNTAACCGGCTGTTCCATTTGGGGCGGNTTTACACGGGCCCTTATTTACAGGGTTCCGCGTNTGGTGTTNTGGCNGGGGAGAAANTCATTTAAGCCGGAAAAAG] [+] EMBL BX619462 [ TCTCTAAATAATACCAATTAATGCTCTTATCGTTGGAATNTAGAATGANCTGAACAGCTTCTTCTTTATCTGACTAGAGTCAAATACTTTCTATTAGTGTACGTGTATCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAATGGATGGAGTATGTACCCCTCGGGTCGAACGGGTCTGAAGn ] consensusID : consensus_9003#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 837 fasta sequence [GGCAGAATCGGCACGATGGGCTGTTTACATCT-TACAAACCCGCTA-CGAACGATAGAAACAAAGTAAGA-ACGAAATGCGCAGACACCCAATTGTGTAGGAAAAATATACATAAAATAGATATTATCACAATGAGATAACTGAA-AGAGATGAAAGCTTGGCAATGTGAGTCGAA-AGGAGAAAGAGCCAT-CAGTATCGAATGTTTGACCATCAACCGCTG-TTGGCCGATCTT-TAAATAATACCAATTAATGCTCT-TATCGT-TGGAATGTTGACAGAACAGAACAGCT-TCT-TCCTTATCTGACGAGAGTCAAATACTTTCTAT-TAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGG-ACCATTCAGT-CAACTTTACGGCAA-TCTCGACG-AAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGGCATCAACTACATCGACACCG-CCCCCTACTAC-GGT-CAGGGACGGTCGGACGGAGGTACTGGGACGGGCGCTACCGCGCCATCCCACGGGCGGGACTTACTACGTGGGCCAACGAACANGTGGAGCCGTATGACCGAAGCCGACGAGGTACGAACGGGACATGNTCCCGACGCTAACAGATGGCGGCAAAANGACAGCCGGCCAAGAAANTGGTACAAGCCGAAGGCTTTGGCAAGNTTGGCTNCGGGGGCTCCGAAA] [+] EMBL BX467185 [GGCAGAATCGGCACGATGGGCTGTTTACATCT TACAAACCCGCTA CGAACGATAGAAACAAAGTAAGA ACGAAATGCGCAGACACCCAATTGTGTAGGAAAAATATACATAAAATAGATATTATCACAATGAGATAACTGAA AGAGATGAAAGCTTGGCAATGTGAGTCGAA AGGAGAAAGAGCCAT CAGTATCGAATGTTTGACCATCAACCGCTG TTGGCCGATCTT TAAATAATACCAATTAATGCTCT TATCGT TGGAATGTTGACAGAACAGAACAGCT TCT TCCTTATCTGACGAGAGTCAAATACTTTCTAT TAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGG ACCATTCAGT CAACTTTACGGCAA TCTCGACG AAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGC GGGGCATCAACTACATCGACACCG ACCCCTACTAC GGT CAGGGACGGTCGGACGGAGGTACTGGGACGGGCGCTACCGCGCCATCCCACGGGCGGGACTTACTACGTGGGCCAACGAACANGTGGAGCCGTATGACCGAAGCCGACGAGGTACGAACGGGACATGNTCCCGACGCTAACAGATGGCGGCAAAANGACAGCCGGCCAAGAAANTGGTACAAGCCGAAGGCTTTGGCAAGNTTGGCTNCGGGGGCTCCGAAA] [+] EMBL BX619463 [ agATCGGCACGA GGGCTGTTTACATCTNCACAAACCCGCTACCGAACGATAGAAACAAAGTAAGAGNCGAAATGCGCAGACACCCAATTGTGTAGGAAAAATATACATAAAATAGATATTATCACAATGAGATAACTGAA AGAGATGAAAGCTTGGCAATGTGAGTCGAA AGGAGAAAGAGCCAT CAGTATCGAATGTTTGACCATCAACCGCTG TTGGCCGATCTT TAAATAATACCAATTAATGCTCT TATCGT TGGAATGTTGACAGAACAGAACAGCT TCT TCCTTATCTGACGAGAGTCAAATACTTTCTAT TAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGNACCATTCAGT CAACTTTACGGCAA TCTCGACG ANGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGGCATCAACTACATCGACACCGCCCCCCTACTACGGGT CAGGG ] [+] EMBL AL693944 [ CATCT TACAAACCCGCTA CGAACGATAGAAACAAAGTAAGA ACGAAATGCGCAGACACCCAATTGTGTAGGAAAANTATACATAAAATAGATATTATCACAATGAGATAACTGAACAGAGATGANAGCTTGGCAATGTGAGTCGAACAGGAGAAAGAGCCATACAGTATCGAATGTTTGACCATCAACCGCTGCTTGGCCGATCTTATAAATAATACCAATTAATGCTCTNTATCGTATGGAATGTTGACAGAACAGAACAGCTATCTNTCCTTATCTGACGAGAGTCAAATACTTTCTATNAAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACAC TTAGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGTCCAAGGTATCGTACGGCACCGG ACCATNCAGTACAACTTTACGGCAACTCTCGACGCAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTACAGCGGGGGCATCAACTACATCGACACCG CCCCCTACTAC GGTACAGGGACGGTCGGA GGAGGTACTGGGACGGGCGCTA CGCGCCAT CCAC GGCGG TTNCTACGTGG C ACGGA AAGT GAGCCGTACGAa ] consensusID : consensus_9003#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 650 fasta sequence [GCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAAGCTTGCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAGCGCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGGCTGCTAACGAACGGTGGCCCACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAAGCGGCAGCGTACTGCAAGCGGGAGGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATGCGCTACAAATGCCCGGTCCGGCAACGTTTCTGGCCGGCATGCAGACGCCCGAGCTGGTGCAGATCAATCTGGACGCTTACTTCGAGGGGCTGTCAGAGAAGGAGGCGGACGTTTTGAGCTATTTGAAGTAGCG] [+] EMBL BX617765 [GCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCGCGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCCAGAGTGTCGAGCGAAGCTTGCAGCTGCTCGGGCTCGACTATCTCGATGTGGTGCAAATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACGAAACGCTGCCGACGCTGGAAGCGCTGCGGGCGGAAGGGAAGCTACGCTTCATTGGCGTTTCGGCCTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGTACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTTTCGGGAGCATAAGATGGGGCTGCTAACGAACGGTGGCCCACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAAGCGGCAGCGTACTGCAAGCGGGAGGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATGCGCTACAAATGCCCGGTCCGGCAACGTTTCTGGCCGGCATGCAGACGCCCGAGCTGGTGCAGATCAATCTGGACGCTTACTTCGAGGGGCTGTCAGAGAAGGAGGCGGACGTTTTGAGCTATTTGAAGTAGCG] consensusID : consensus_9003#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 348 fasta sequence [CCGATCGTTCCCAATCGTTTGCTACCTCAACTACCTCGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGGACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGTACCGGAACATTCAGTCAACTTTACGGCGATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGCCAGGGACGGTCTGAAGAGGTACTGGGACGGGCGCTACGCGCCATCCCTCGCGAAGCTTACTACGTGGCCACAAA] [+] EMBL BM619181 [CCGATCGTTCCCAATCGTTTGCTACCTCAACTACCTCGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGGACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGTACCGGAACATTCAGTCAACTTTACGGCGATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAACTACATCGACACCGCCCCCTACTACGGCCAGGGACGGTCTGAAGAGGTACTGGGACGGGCGCTACGCGCCATCCCTCGCGAAGCTTACTACGTGGCCACAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9003#2 ------------------------------------------------------------ consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ------------------------------------------------------------ consensus_9003#0 ACGCTGTTTACATCTTACAAACCCGCTACCGAACGATAGAAACAAAAACAGAACAGCTTC 60 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 ------------------------------------------------------------ consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ------------------------------------------------------------ consensus_9003#0 TTCCTTATCTGACGAGAGTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAA 120 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 ------------------------------------------------------------ consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ------------------------------------------------------------ consensus_9003#0 TTGATCAAACGTATGCTACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTT 180 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 ------------------------------------------------------------ consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ------------------------------------------------------------ consensus_9003#0 TGTGGAAAACTTTCACCTCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCG 240 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 ---------------------------------------------------------GGC 3 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ------------------------------------------------------------ consensus_9003#0 AACGGGTCTGAAGGTGTCCAAGGTATCGTTCGGCACCGGACCATTCAGTCAACTTTACGG 300 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 AGAATCGGCACGATGGGCTGTTTACATCTTACAAACCCGCTACGAACGATAGAAACAAAG 63 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ------------------------------------------------------------ consensus_9003#0 CAATCTCGACGAAGCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGCATCAA 360 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 TAAGAACGAAATGCGCAGACACCCAATTGTGTAGGAAAAATATACATAAAATAGATATTA 123 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 -----------------------------------------------------------G 1 consensus_9003#0 CTACATCGACACCGCCCCCTACTACGGTCAGGGACGGTCGGAGGAGGTACTGGGACGGGC 420 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 TCACAATGAGATAACTGAAAGAGATGAAAGCTTGGCAATGTGAGTCGAAAGGAGAAAGAG 183 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 GCAGAATTCCNGCACGATGTGAGATGAAAGCTTGGCA-TGTGAGTCGAAAGGAGAAAGAG 60 consensus_9003#0 GCTACGCGCCATCCCACGGGCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCG 480 consensus_9003#3 -------------------GCGGCTTACTACGTGGCCACGAAAGTGAGCCGTTACGAGCG 41 consensus_9003#2 CCATCAGTATCGAATGTTTGACCATCAACCGCTGTTGGCCGATCTTTAAATAATACCAAT 243 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 CCATCAGTATCGAATGTTTGACCATCAACCGCTGTTGGCCGATCTTTAAATAATACCAAT 120 consensus_9003#0 CGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCC-----AGAGTGTCGAG 535 consensus_9003#3 CGAGTACGACGGAATGTTCGACTACAGTGCGCAAAAGACGCGCC-----AGAGTGTCGAG 96 consensus_9003#2 TAATGCTCTTATCGTTGGAATGTTGACAGAACAGAACAGCTTCTTCCTTATCTGACGAGA 303 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 TAATGCTCTTATCGTTGGAATGTTGACAGAACAGAACAGCTTCTTCCTTATCTGACGAGA 180 consensus_9003#0 CGAAGCTTGCA----------GCTGCTCGGGCTCGACTA-----TCTCGATGTGGTGCAA 580 consensus_9003#3 CGAAGCTTGCA----------GCTGCTCGGGCTCGACTA-----TCTCGATGTGGTGCAA 141 consensus_9003#2 GTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCT 363 consensus_9003#4 ------------------------------------CCGATCGTTC-CCAATCGTTTGCT 23 consensus_9003#1 GTCAAATACTTTCTATTAGTGTACGTGTTTCGTCTCGTGAGAATTGATCAAACGTATGCT 240 consensus_9003#0 ATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACG---AAACGCTGCCG 637 consensus_9003#3 ATCCACGACGTCGAGTTTGCGCCCAACCTGGACATTGTGCTGAACG---AAACGCTGCCG 198 * ** ** * consensus_9003#2 ACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACC 423 consensus_9003#4 ACCTCAACTACCTCGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACC 83 consensus_9003#1 ACCTCAACTACCTTGTCGAAATTGAAGTGAAAATGGACACTTTTGTGGAAAACTTTCACC 300 consensus_9003#0 ACGCTGGAAGCGCTGCGG--GCGGAAGGGAAGCT--ACGCTTCATTGGCG---TTTCGGC 690 consensus_9003#3 ACGCTGGAAGCGCTGCGG--GCGGAAGGGAAGCT--ACGCTTCATTGGCG---TTTCGGC 251 ** * * * **** *** * ** *** *** **** * consensus_9003#2 TCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGT 483 consensus_9003#4 TCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGGACGGGTCTGAAGGTGT 143 consensus_9003#1 TCAAGGAGTGCGTGGAACGGATGGAGTATTTACCCCTCGGGCGAACGGGTCTGAAGGTGT 360 consensus_9003#0 CTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGT 750 consensus_9003#3 CTATCCGCTCGCTGTGTTGCGGGAAATCATAACGAAAGCGCCCGGCCGCTTCGATACGGT 311 * * ** * * * * * ** * * * * * ** ** consensus_9003#2 -CCAAGGTATCGTT-CGGCAC-CGGACCATTCAGTCAACTTTACGGCA-ATCTCGACGAA 539 consensus_9003#4 -CCAAGGTATCGTT-CGGTAC-CGGAACATTCAGTCAACTTTACGGCG-ATCTCGACGAA 199 consensus_9003#1 -CCAAGGTATCGTT-CGGCAC-CGGACCATTCAGTCAACTTTACGGCA-ATCTCGACGAA 416 consensus_9003#0 ACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTT 810 consensus_9003#3 ACTTAGCTACTGTCGCAACACGCTGTTCGATGATTCGCTGGAGGAGTACATTCCCTTCTT 371 * ** ** ** * ** * * * * * ** * ** * consensus_9003#2 GCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGGGCATCAA-CTAC-ATCGA- 596 consensus_9003#4 GCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGG-CATCAA-CTAC-ATCGA- 255 consensus_9003#1 GCGAAAGCACTGGAAGCGGTCAAGCATGCGGTCCAGCGGGG-CATCAAGCTAC-ATCGAG 474 consensus_9003#0 TCGGGAGCATAAGATGGGCCTGATTTGCGCTTCCGGCCACGGGATGGGGCTGCTAACGAA 870 consensus_9003#3 TCGGGAGCATAAGATG------------------------------GGGCTGCTAACGAA 401 ** **** ** * ** * * *** consensus_9003#2 CACCGCCCCCTACTACGGTCAGGGACGGTCGGACGG-AGGTACTGGG-ACGGGCGCTACC 654 consensus_9003#4 CACCGCCCCCTACTACGGCCAGGGACGGTCTGA-AG-AGGTACTGGG-ACGGGCGCTAC- 311 consensus_9003#1 CACCGCCCC-TACTACGGTCAGGGACGGTCGGA-GG-AGGTACTGGGGACGGGCGCTAC- 530 consensus_9003#0 CGGTGGCCC--ACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAA 928 consensus_9003#3 CGGTGGCCC--ACAGCCGTGGCATCCGGCCGATCGGCAGCTGAGGGAGGTGTGTGCGGAA 459 * * *** ** * * *** * * ** * ** * * ** consensus_9003#2 GCGCCA---TCCCACGGGCGGGACTTACTACGTGGGCCAACGAACANGTGGAGCCGTATG 711 consensus_9003#4 GCGCCA---TCCCTCG--CGAAGCTTACTACGTGGCC--ACAAA---------------- 348 consensus_9003#1 GCGCCA---TCCCACGGGCGGN--TTACTACGTGGNCACGAAAGTGAGCCGTTTACGAGG 585 consensus_9003#0 -CGGCA-CTTACTGCAAGCGGGA--GGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATG 984 consensus_9003#3 GCGGCAGCGTACTGCAAGCGGGA--GGGCGTGGAGCTGGGCAAGCTGGCGATGCACCATG 517 ** ** * * * ** * * * consensus_9003#2 ACCGAAGCCGACGAGGT--------ACGAACGGGACATGNTCCCGACGCTAACAGATGGC 763 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 CGCGAGTACGACGGAATGTTCGACTACAGTGCGCACAAAGACGCGCCAGGAGTGTCGAGC 645 consensus_9003#0 CGCTACAAATGCCCGGT---------CCGGCAACGTTTCTGGCCGGCAT--GCAGACGCC 1033 consensus_9003#3 CGCTACAAATGCCCGGT---------CCGGCAACGTTTCTGGCCGGCAT--GCAGACGCC 566 consensus_9003#2 GGCAAAANGACAGCCGGCCAAGAAANT-GGTACAAGCCGAAGGCTTTGGCAAGNTTGGCT 822 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 GAAAGGCTTGCAGACTGCTNCGGGCGTCGACTTATCTCGATGTGGTTGCCAAAGTC--CA 703 consensus_9003#0 CGTGCTGGTGCAGATCAATCTGGACGC----TTACTTCGAGGGG-CTGTCAGAGAAGGAG 1088 consensus_9003#3 CGAGCTGGTGCAGATCAATCTGGACGC----TTACTTCGAGGGG-CTGTCAGAGAAGGAG 621 consensus_9003#2 NCGGGGGCTCCGAAA--------------------------------------------- 837 consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 ACGAAAGTACNGAAGGTTTTGAGCCAAACCTGGACATTGTGGCTTGANANCAGNAAAACN 763 consensus_9003#0 GCGGACGTTTTGAGCTATTTGAAGGAGCGCGTTTTCCCAAAGGTGGAGAATAAACACTGG 1148 consensus_9003#3 GCGGACGTTTTGAGCTATTTGAAGTAGCG------------------------------- 650 consensus_9003#2 ------------------------------------------------------------ consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 GNCTTGCCGAACAGCTGGAAAAGCGNACTATGGACGCNGGACNGGGAAAAGGGGAAAAGA 823 consensus_9003#0 GAAGGCGTTGGGCTGCAGCAATACCGAGCCGCCATGAAGCAAGCGCAACTGTAGCCGAAC 1208 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 ------------------------------------------------------------ consensus_9003#4 ------------------------------------------------------------ consensus_9003#1 NNTAACCGGCTGTTCCATTTGGGGCGGNTTTACACGGGCCCTTATTTACAGGGTTCCGCG 883 consensus_9003#0 ATATGAACTCCCCTCCCCCCATCCAAGTCGGCTACGACGGCTGGAGTGATGTATTTCAGC 1268 consensus_9003#3 ------------------------------------------------------------ consensus_9003#2 -------------------------------------------- consensus_9003#4 -------------------------------------------- consensus_9003#1 TNTGGTGTTNTGGCNGGGGAGAAANTCATTTAAGCCGGAAAAAG 927 consensus_9003#0 AACGGGCTTTTTTTTTCTTCTATTTCCTTTCAAATAAA------ 1306 consensus_9003#3 -------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||