cluster # 9024

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Anopheles gambiae
cluster # 9024 cluster # 9024 Sequences # 13 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9024#0 length = 1155 sequences # 10
consensus_9024#1 length = 671 sequences # 1

consensus_9024#2 length = 565 sequences # 1
consensus_9024#3 length = 488 sequences # 1

consensusID : consensus_9024#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 10
consensus length = 1155
fasta sequence

                              [CCGCCCGCATTTACGTGGATTGGAAGCTGCCGTCCTGTTTCGGACGCTCGATTAAGTGGAGAATTATTGCCATATTCGATCTGGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACACCCACGCACGCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT-GGATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAATGAAAACGATCGGGGACGTTACTCGAAGCAGCCATACCGCCGATAAGGGGGAGGGTGAAAGTAAATCAACAAACTCGTCACAAAAGCTCCCGTTGGTTTTTCAAGAGCTTGCCATCTCTTTAATTTGTTGTAGTTTTATGTTTATTAATTCGTAATCAGCATACTATTGATAGATTCACAATCAGATTGTGAAATGTTAGTCATTACTGTAAATACTTAATCGATCGTAAAGTTTAAAGCGGTATAAAACGTAACTGAACAAAAAAAAAATGCAGAAAGCAACAAAACAACTAACAAATAAATAAATCCAAA-CGTATCAAAAGCATTAAAAAGAACACATGTAAAATGCGTGTTTGATCGCTGTATTACTCACACGGCACTAAAG-GC-AGAACTAACTTATTTAAAATATGTTTTTATCGTTGTTTGACTGATAACTCTCTGATTGTACTCATAAAATATTATTAAATCCCTTTACTGACAC]

[+] EMBL BM595817             [CCGCCAGCATTTACGTGGATTGGAAGCTGCCGTCCTGTTTCGGACGCTCGATTAAGTGGAGAATTATTGCCATATTCGATCTCGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACCCCCACGCACGCACAAACATTATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCTGGGATTGTGGTTGGGCTGCTATCCGTTGTCATATACGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM635308             [    CCGCATTTACGTGGATTGGAAGCTGCCGTCCTGTTTCGGACGCTCGATTAAGTGGAGAATTATTGCCATATTCGATCTCGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACCCCCACGCACGCACAAACATTATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT GGATTGTGGTTGGGCTGCTATCCGTTGTCATATACGTGTACCTATGGATCGTGGTTTACAGCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM605551             [    CCGCATTTACGTGGATTGGAAGCTGCCGTCCTGTTTCGGACGCTCGATTAAGTGGAGAATTATTGCCATATTCGATCTGGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACACCCACGCACGCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT GGATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAATGAAAACGATCGGGGACGTTACTCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX629074             [                     GGAAGCTGCCGTCCTGTTTCGGACGCTCGATTAAGTGGAGAATTATTGCCATATTCGATCTGGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACACCCACGCACGCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT GGATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAATGAAAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS08MDW             [                                                                             tATCTGGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACACCCACGCACGCACAAATATCATTTGCGTGTAGGGTTGTATCGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM615277             [                                                                                                                                                                                                                                   CCGGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT GGATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAATGAAAACGATCGGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX621268             [                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT GGATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAATGAAAACGATCGGGGACGTTACTCGAAGCAGCCATACCGCCGATAAGGGGGAGGGTGAAAGTAAATCAACAAACTCGTCACAAAAGCTCCCGTTGGTTTTTCAAGAGCTTGCCATCTCTTTAATTTGTTGTAGTTTTATGTTTATTAATTCGTAATCAGCATACTATTGATAGATTCACAATCAGATTGTGAAATGTTAGTCATTACTGTAAATACTTAATCGATCGTAAAGTTTAAAGCGGTATAAAACGTAACTGAACAAAAAAAAAATGCAGAAAGCAACAAAACAACTAACAAATAAATAAATCCAAA CGTATCAAAAGCATTAAAAAGAACACATGTAAAATGCGTGTTTGATCGCTGTATTACTCACACGGCACTAAAG GC AGAACTAACTTATTTAAAATATGTTTTTATCGTTGNTTGACTGATAACTCTCTGATTGNACTCATAAAATATTATTAAATCCCCTTA       ]
[+] EMBL BX608949             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCT GGATTGTGGTTGGGCTGCTATCCGTTGTCATATACGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAA  AAAACGATCGGGGACGTTACTCGAAGCAGCCATACCGCCGATAAGGGGGAGGGTGAAAGTAAATCAACAAACTCGTCACAAAAGCTCCCGTTGGTTTTTCAAGAGCTTGCCATCTCTTTAATTTGTTGTAGTTTTATGTTTATTAATTCGTAATCAGCATACTATTGATAGATTCACAATCAGATTGTGAAATGTTAGTCATTACTGTAAATACTTAATCGATCGTAAAGTTTAAAGCGGTATAAAACGTAACTGAACAAAAAAAAAATGCAGAAAGCAACAAAACAACTAACAAATAAATAAATCCAAA CGTATCAAAAACATTAAAAAGAACACATGTAAAATCCGTGTTTGATCGCTGTATTACTCACACGGCACTAAAG GC AGAACTAACTT                                                                                   ]
[+] EMBL BM604055             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGCCATACCGCCGATAAGGGGGAGGGTGAAAGTAAATCAACAAACTCGTCACAAAAGCTCCCGTTGGTTTTTCAAGAGCTTGCCATCTCTTTAATTTGTTGTAGTTTTATGTTTATTAATTCGTAATCAGCATACTATTGATAGATTCACAATCAGATTGTGAAATGTTAGTCATTACTGTAAATACTTAATCGATCGTAAAGTTTAAAGCGGTATAAAACGTAACTGAACAAAAAAAAAATGCAGAAAGCAACAAAACAACTAACAAATAAATAAATCCAAA CGTATCAAAAGCATTAAAAAGAACACATGTAAAATGCGTGTTTGATCGCTGTATTACTCACACGGCACTAAAG GC AGAACTAACTTATTTAAAATATGTTTTTATCGTTGTTTGACTGATAACTCTCTGATTGTACTCATAAAATATTATTAAATCCCTTTACTGACAC]
[-] EMBL CNS08MDX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGAACAAAAAAAAAATGCAGAAAGCAACAAAACAACTAACAAATAAATAAATCCAAACCGTATCAAAAGCATTAAAAAGAACACATGTAAAATGCGTGTTTGATCGCTGTATAACTCACACGGCACTAAAGAGCAAGAACTAACTTATTTAAAATATGTTTTTATCGTTGTTTGACTGATAACTCTCTGATTGTACTCATAAAATATTATTAAATCCCTTTAt      ]




>consensus_9024#0
CCGCCCGCATTTACGTGGATTGGAAGCTGCCGTCCTGTTTCGGACGCTCGATTAAGTGGA
GAATTATTGCCATATTCGATCTGGAACGTTCTATACAGCGCGTTGCCAGGCAGTTTGTTG
TGTGTGTTTGCTTGCTTGCTTCCGATTTTGTGCACATTCGACACCCACGCACGCACAAAT
ATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTC
AGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGC
ATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACC
ATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTC
ATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTC
ATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATT
TATAACGCGGTGGTTTACTTCATCGATGGATACGTTTTGGGCGGAACGCTCTGGATTGTG
GTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGTGGTTTACAGCTACTTC
GTGACGCTGAAGAATGAAAACGATCGGGGACGTTACTCGAAGCAGCCATACCGCCGATAA
GGGGGAGGGTGAAAGTAAATCAACAAACTCGTCACAAAAGCTCCCGTTGGTTTTTCAAGA
GCTTGCCATCTCTTTAATTTGTTGTAGTTTTATGTTTATTAATTCGTAATCAGCATACTA
TTGATAGATTCACAATCAGATTGTGAAATGTTAGTCATTACTGTAAATACTTAATCGATC
GTAAAGTTTAAAGCGGTATAAAACGTAACTGAACAAAAAAAAAATGCAGAAAGCAACAAA
ACAACTAACAAATAAATAAATCCAAACGTATCAAAAGCATTAAAAAGAACACATGTAAAA
TGCGTGTTTGATCGCTGTATTACTCACACGGCACTAAAGGCAGAACTAACTTATTTAAAA
TATGTTTTTATCGTTGTTTGACTGATAACTCTCTGATTGTACTCATAAAATATTATTAAA
TCCCTTTACTGACAC

consensusID : consensus_9024#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 671
fasta sequence

                              [CCGACAGGGTGCACTGTTCTGCACATGGTTAAGTGCCCTAGGTCAACTAGCAATGTGATATCATATTGTAATTACCACACAGTTCAATCAAACCGATTAACACTCCCATACAAATGTGTTGCGGAAACGCATAAAGGTGGAATTGGGAGAAGATGATGCTCATCGTACTCGAGTTTCTCTCATCGTTTGCGAGCGCGTGCAGCGCACAAGTAACCATCATCTTTTATTTTTAGCTCAAAAGAAAGGAACGGTCAGCATATTGAAAGGTGGAGAAAAAAATGGTGCTTTCTTCGGATACAATCAACTTAAAGCCCAGTCGGGTCGTAAATCGATTTGGCCGGAACGTTTTTATTACATTCCGGCCTGCTATCGTCCTGATACTGTGGACTGTCCGTGTGCCGAAATGATGTCATTGTACTTGTGGGTGGTTGTTTTGATTAGAGATTCCTAAGCCCTAGCTACTAGCTAGCAGCAGGTGAGAATCACTACAACAAAATATCGTTACTCTGGTATGCGTGAGCGCCTGCTCTACAGCAAGTCATTTGCGCTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGAT]

[+] EMBL BM603241             [CCGACAGGGTGCACTGTTCTGCACATGGTTAAGTGCCCTAGGTCAACTAGCAATGTGATATCATATTGTAATTACCACACAGTTCAATCAAACCGATTAACACTCCCATACAAATGTGTTGCGGAAACGCATAAAGGTGGAATTGGGAGAAGATGATGCTCATCGTACTCGAGTTTCTCTCATCGTTTGCGAGCGCGTGCAGCGCACAAGTAACCATCATCTTTTATTTTTAGCTCAAAAGAAAGGAACGGTCAGCATATTGAAAGGTGGAGAAAAAAATGGTGCTTTCTTCGGATACAATCAACTTAAAGCCCAGTCGGGTCGTAAATCGATTTGGCCGGAACGTTTTTATTACATTCCGGCCTGCTATCGTCCTGATACTGTGGACTGTCCGTGTGCCGAAATGATGTCATTGTACTTGTGGGTGGTTGTTTTGATTAGAGATTCCTAAGCCCTAGCTACTAGCTAGCAGCAGGTGAGAATCACTACAACAAAATATCGTTACTCTGGTATGCGTGAGCGCCTGCTCTACAGCAAGTCATTTGCGCTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGAT]




>consensus_9024#1
CCGACAGGGTGCACTGTTCTGCACATGGTTAAGTGCCCTAGGTCAACTAGCAATGTGATA
TCATATTGTAATTACCACACAGTTCAATCAAACCGATTAACACTCCCATACAAATGTGTT
GCGGAAACGCATAAAGGTGGAATTGGGAGAAGATGATGCTCATCGTACTCGAGTTTCTCT
CATCGTTTGCGAGCGCGTGCAGCGCACAAGTAACCATCATCTTTTATTTTTAGCTCAAAA
GAAAGGAACGGTCAGCATATTGAAAGGTGGAGAAAAAAATGGTGCTTTCTTCGGATACAA
TCAACTTAAAGCCCAGTCGGGTCGTAAATCGATTTGGCCGGAACGTTTTTATTACATTCC
GGCCTGCTATCGTCCTGATACTGTGGACTGTCCGTGTGCCGAAATGATGTCATTGTACTT
GTGGGTGGTTGTTTTGATTAGAGATTCCTAAGCCCTAGCTACTAGCTAGCAGCAGGTGAG
AATCACTACAACAAAATATCGTTACTCTGGTATGCGTGAGCGCCTGCTCTACAGCAAGTC
ATTTGCGCTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGC
TCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATT
CTGCTCTCGAT

consensusID : consensus_9024#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 565
fasta sequence

                              [CCGCTGTTCTGCACATGGTTAAGTGCCCTAGGTTCGAGTCGGTCCCGAAATCTAGGTCAATCAGTCGGTCAATCAAAGTGTGTCAGACTGCATCGCGCGTTTAGGGTTGCAATAGCTCTCTCCGTCTGCTTGAATTGTGCCTACGCTTGCGTAAAAGTGCGAATGAAAGAGAAACATGCCCTACGCGAAAGTTATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTTACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTT]

[+] EMBL BM619152             [CCGCTGTTCTGCACATGGTTAAGTGCCCTAGGTTCGAGTCGGTCCCGAAATCTAGGTCAATCAGTCGGTCAATCAAAGTGTGTCAGACTGCATCGCGCGTTTAGGGTTGCAATAGCTCTCTCCGTCTGCTTGAATTGTGCCTACGCTTGCGTAAAAGTGCGAATGAAAGAGAAACATGCCCTACGCGAAAGTTATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTTACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTT]




>consensus_9024#2
CCGCTGTTCTGCACATGGTTAAGTGCCCTAGGTTCGAGTCGGTCCCGAAATCTAGGTCAA
TCAGTCGGTCAATCAAAGTGTGTCAGACTGCATCGCGCGTTTAGGGTTGCAATAGCTCTC
TCCGTCTGCTTGAATTGTGCCTACGCTTGCGTAAAAGTGCGAATGAAAGAGAAACATGCC
CTACGCGAAAGTTATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCA
GCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGG
AGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTTACCGTGCGCATCGA
CTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACT
CAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAA
TCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCAT
TAGCGTAATTTATAACGCGGTGGTT

consensusID : consensus_9024#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 488
fasta sequence

                              [GATCGCCGAGGGTCACGCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTGGGCGGAACGCTCTGGCATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGT]

[+] EMBL AL694223             [GATCGCCGAGGGTCACGCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAAATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCGATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTTTGGGCGGAACGCTCTGGCATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTATGGATCGT]




>consensus_9024#3
GATCGCCGAGGGTCACGCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGCCAGCA
ATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGA
TCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAATTTTC
ACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGGTGAAA
ATAATCTACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATTATGGGC
GTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATGCTTGCG
ATAGGATTGCTCATTAGCGTAATTTATAACGCGGTGGTTTACTTCATCGATGGATACGTT
TGGGCGGAACGCTCTGGCATTGTGGTTGGGCTGCTATCCGTTGTCATATATGTGTACCTA
TGGATCGT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9024#0      ------------------CCGCCCGCATTTACGTG-----GATTGG-----AAGCTGCCG 32
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ----------CCGCTGTTCTGCACATGGTTAAGTGCCCTAGGTTCG-----AGTCGGTCC 45
consensus_9024#1      CCGACAGGGTGCACTGTTCTGCACATGGTTAAGTGCCCTAGGTCAACTAGCAATGTGATA 60
                                                                                  

consensus_9024#0      TCCTGTTTCGGACGCTCGATTAAGTGGAGAATTATTGCCATATTCGATCTGGAACGTTCT 92
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      CGAAATCTAGGTCAATCAGTCGGTCAATCAAAGTGTGTCAGACTGCATC--GCGCGTTTA 103
consensus_9024#1      TCATATTGTAATTACCACACAGTTCAATCAAACCGATTAACACTCCCATACAAATGTGTT 120
                                                                                  

consensus_9024#0      ATACAGCGCGTTGCCAGGCAGTTTGTTGTGTGTGTTTGCTTGCTTGCTTCCGATTTTGTG 152
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      GGGTTGCAATAGCTCTCTCCGTCTGCTTGAATTGTGCCTACGCTTGCGTAAAAGTGCGAA 163
consensus_9024#1      GCGGAAACGCATAAAGGTGGAATTGGGAGAAGATGATGCTCATCGTACTCGAGTTTCTCT 180
                                                                                  

consensus_9024#0      CACATTCGACACCCACGCAC-GCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGC 211
consensus_9024#3      ---GATCGCCGAGGGT-CAC-GCACAAATATCATTTGCGTTTAGGCTTGTATCGTTTCGC 55
consensus_9024#2      TGAAAGAGAAACATGC-CCT-ACGCGAAAGTTATTTGCGTTTAGGCTTGTATCGTTTCGC 221
consensus_9024#1      CATCGTTTGCGAGCGCGTGCAGCGCACAAGTAACCATCAT-----CTTTTATTTTTAGCT 235
                                            * *  *  * *    * *     *** ***  **    

consensus_9024#0      CAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAA 271
consensus_9024#3      CAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAA 115
consensus_9024#2      CAGCAATCACAATGGGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAA 281
consensus_9024#1      CAAAAGAAAGGAACGGTCAGCATATTGAAAGGTGGAGAAAAAAATGGTGCTTTCTTCGGA 295
                      **  *   *  *  ** ****   * *  ** *   *      *** *  *  ** ** *

consensus_9024#0      GCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAA 331
consensus_9024#3      GCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAA 175
consensus_9024#2      GCGGATCCATTGCCACGGGAGTACTCGGCATTCTGCTCTCGATCATCTCGATTATTCTAA 341
consensus_9024#1      TACAATCAACTTA---AAGCCCAGTCGG-GTCGTAAATCGATTTGGCCGGAACGTTTTTA 351
                          *** * *       *   * ****  *  *        *   *  **   ** * *

consensus_9024#0      TTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGG 391
consensus_9024#3      TTTTCACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGG 235
consensus_9024#2      TTTTTACCGTGCGCATCGACTTCAAGACCATTCTCATGGACTGGCTGCCGCAAAATGTGG 401
consensus_9024#1      TTACATTCCGGCCTGCTATCGTCCTGATACTGTGGACTGTCCGTGTGCCG--AAATGATG 409
                      **     *  **       * **  **   *    *  * * *  *****  *****  *

consensus_9024#0      TGAAAATAATC-TACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATT 450
consensus_9024#3      TGAAAATAATC-TACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATT 294
consensus_9024#2      TGAAAATAATC-TACGCACTCAATCTGGTCATGACGATACTGATCTCACTGCTGATGATT 460
consensus_9024#1      TCATTGTACTTGTGGGTGGTTGTTTTGATTA-GAGATTCCTAAGCCC-TAGCTACTAGCT 467
                      * *   ** *  *  *   *   * ** * * **   * ** * * *   ***  *   *

consensus_9024#0      ATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATG 510
consensus_9024#3      ATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATG 354
consensus_9024#2      ATGGGCGTAATGAAGAAAAATCACTTCTTCATGATGCCGTGGGTCGTGCTGGGACTGATG 520
consensus_9024#1      A-----GCAGCAGGTGAGAATCACTACAACAAAATATCGTTACTCTGGTATGCGTGAGCG 522
                      *     * *       * ******* *  **  **  ***   **  *   *       *

consensus_9024#0      CTTGCGATAGGATTGCTCATTAGCGT---AATTTATAACGCGGTGGTTTACTTCATCGAT 567
consensus_9024#3      CTTGCGATAGGATTGCTCATTAGCGT---AATTTATAACGCGGTGGTTTACTTCATCGAT 411
consensus_9024#2      CTTGCGATAGGATTGCTCATTAGCGT---AATTTATAACGCGGTGGTT------------ 565
consensus_9024#1      CCTGCTCTACAGCAAGTCATTTGCGCTTAGGCTTGTATCGTTTCGCCAGCAATCACAATG 582
                      * ***  **       ***** ***       ** ** **    *               

consensus_9024#0      GGATACGTTTTGGGCGGAACGCTCTGG-ATTGTGGTTGGGCTGCTATCCGTTGTCATATA 626
consensus_9024#3      GGATACGTTT-GGGCGGAACGCTCTGGCATTGTGGTTGGGCTGCTATCCGTTGTCATATA 470
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      GGCCAGCCGCTAGTCAGCTCCTGCTGCCGATGTTATTCGCTCCGAAGCGGATCCATTGCC 642
                                                                                  

consensus_9024#0      TGTGTACCTATGGATCGTGGTTTACAGCTACTTCGTGACGCTGAAGAATGAAAACGATCG 686
consensus_9024#3      TGTGTACCTATGGATCGT------------------------------------------ 488
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ACGGGAGTACTCGGCATTCTGCTCTCGAT------------------------------- 671
                                                                                  

consensus_9024#0      GGGACGTTACTCGAAGCAGCCATACCGCCGATAAGGGGGAGGGTGAAAGTAAATCAACAA 746
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      ACTCGTCACAAAAGCTCCCGTTGGTTTTTCAAGAGCTTGCCATCTCTTTAATTTGTTGTA 806
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      GTTTTATGTTTATTAATTCGTAATCAGCATACTATTGATAGATTCACAATCAGATTGTGA 866
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AATGTTAGTCATTACTGTAAATACTTAATCGATCGTAAAGTTTAAAGCGGTATAAAACGT 926
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AACTGAACAAAAAAAAAATGCAGAAAGCAACAAAACAACTAACAAATAAATAAATCCAAA 986
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CGTATCAAAAGCATTAAAAAGAACACATGTAAAATGCGTGTTTGATCGCTGTATTACTCA 1046
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      CACGGCACTAAAGGCAGAACTAACTTATTTAAAATATGTTTTTATCGTTGTTTGACTGAT 1106
consensus_9024#3      ------------------------------------------------------------
consensus_9024#2      ------------------------------------------------------------
consensus_9024#1      ------------------------------------------------------------
                                                                                  

consensus_9024#0      AACTCTCTGATTGTACTCATAAAATATTATTAAATCCCTTTACTGACAC 1155
consensus_9024#3      -------------------------------------------------
consensus_9024#2      -------------------------------------------------
consensus_9024#1      -------------------------------------------------