These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9033#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1260 fasta sequence [TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG-GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC-AAGGGCGAT-CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG-ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC--GCTGCTCAACATGCTGAACATCT--CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG-CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG-ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAGAAAAAAAACAAAAAAACAAAAAGGCCACATGTGCCCCAGCCGCC] [+] EMBL CNS09DLO [TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGAGTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTTGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCT CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACA CAAGAACGACGACCCACGCCGACCGCATGCG ] [+] EMBL CNS09C6M [ TAGCGACCG TTTGTTCTTAAATTTCTTTACGAATCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGATGCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCACGGGCCG TCAACATGCTGAACATCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGC ] [+] EMBL CNS09I51 [ GAGGACAAAGCAACCTGGAAGTCCAACTATTTCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAGCGCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAG ] [+] EMBL CNS08EIS [ ACGAATACCCGAGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCAAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCT CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGTTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTG ] [+] EMBL CNS08EK9 [ AGATGTTTCATCGTCGGCGCTGACAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGTGCTGATGGGCGAGAACACCATGATGCGCAAG GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCT CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAACGTGGAGT ] [-] EMBL CNS09DLP [ GCCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTAAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACCAAAGGGCGAT CTGGCCGAGATCCGCGAAAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG AAACTTCCGCTCGAGGTTGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCT CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACAACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAGAAAAAAAACAAAAAAAC ] [-] EMBL CNS08EKA [ CCATTCGCGGGCATCTGGAGAACAACCAGAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT CTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCG AAACTTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCT CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATACAGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGA ] [-] EMBL CNS08EIT [ CTCAACCACATCAAGGGCAACGTGGGCTTCGTGTTCACC AAGGGCGAT TTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTGCCGGTGCGAATCG TCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCT CGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGTTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACAACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGCAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAA ] [+] EMBL CNS08FTW [ GGTGCGTG CCCGGCCCGTGCCGGTGCG ATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACATCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGG CAACGACTGCTTCCGCTGCCGCCCCAGCTGCCAAGGCTGAGGAGAAGAAGGTGGAGTCCGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACA CAAG ACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTGTGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTCAAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATACGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGGTGAGTCAGAATCGCAAGAGGAAACAATCCGGAAACAAAAAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCCAGCCGCC] [-] EMBL CNS09I52 [ CACCGGTCTCGGTCCGGAGAAGACCTCCTTCTTCCAGGCCCTGTCGATCCCGACCAAGATTTCCAAGGGTACGATTGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGCGCTTCCGAGGCCAC GCTGCTCAACATGCTGAACTTCTCGCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGGCTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGAACAGCATTGCCAACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCGAAACGGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGACAACAACTGATTCCGCTGCCGC ] consensusID : consensus_9033#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 956 fasta sequence [TTGTTTTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGACAAAGAAGTAGTGGTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGCGGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCGATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTCGAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCTCATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTACGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAACGTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCT] [+] EMBL CNS093TA [TTGTTTTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGACAAAGAAGTAGTGGTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGCGGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCGATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTCGAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCTCATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTACGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAACGTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAACAGTGCTCGAGGAATTCCGCAGCT] [+] EMBL CNS09KSE [ ATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAACAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAGTGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCACAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGACAAAGAAGTAGTGGTTCAACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATTCCCTGTTGATCTTTTTAATTTCATGCTAGTGGATAATACGTCGACGTATCGGCGGCGGCAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCGATCATTGCACAGTGGCAGCTCTTCCTGGACCTGCTGGAAGTACAGATGGCTGGCAAGGTCGAGCAGGAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCATCCAAACATTCGCTCATCCTTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCCATAGACTGCGGTAACGTACGGCCGTAGAAATTATTCGCAAGCGACACCAGCTGCGATGAGCCTTGATTTTCGAGATTCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCACCTGTGCTGGAAGCGCGTTAAACGTCGTAACAAATCCAGTGGCGCAGAAATTTTCACCACTCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTCTCGCAGGTAGCTGAGTGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGAGCGACCGTTACCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAACAG ] consensusID : consensus_9033#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 708 fasta sequence [GACCTCACCAGAAGCACAAAACCACGAGCTCTCGAGAGTGGGAGCGCCAAAAAAAATGCATTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTCGCGCGCGGCTGTGATGTACCGCTGGCGCACTACAAAACGATGCACTGCCAGCCGGTCGGCAACCGTCCGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTGTCCCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCGTGCACGTGGACTGTGCGGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCCGCAGAGCTGCTGCTCGACCGGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTTTTTCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAACGGATATTTTTGTGAAGGGCACCGGTAGTAAGCCGGCCACTGAACCGAAGCTACAGTGCAAGT] [+] EMBL CNS08NCT [GACCTCACCAGAAGCACAAAACCACGAGCTCTCGAGAGTGGGAGCGCCAAAAAAAATGCATTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTCGCGCGCGGCTGTGATGTACCGCTGGCGCACTACAAAACGATGCACTGCCAGCCGGTCGGCAACCGTCCGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTGTCCCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCGTGCACGTGGACTGTGCGGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCCGCAGAGCTGCTGCTCGACCGGGACGGTTGCCCGGAAAGGTACGACTGCCCCTCGATAACGGCGCACGACAGCAGCAAGTGTTACTTTAATGGCAAAACGTACGACATCGATCAGCCCGTGCCGGACGCGGAGGTTTTTCAGTTTTGCTCTGCCGCCTGCTACTGCCGATCCGCTAATCCGATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAACGGATATTTTTGTGAAGGGCACCGGTAGTAAGCCGGCCACTGAACCGAAGCTACAGTGCAAGT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9033#1 ------------------------------------------------------------ consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 TTCGCTCCGCATACGCTAATCTGTCAATAGCGACCGCTTTGTTCTTAAATTTCTTTACGA 60 consensus_9033#1 -------------------------------------------------------TTGTT 5 consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 GTCCCTATTATCACATCAAGATGGGTAGGGAGGACAAAGCAACCTGGAAGTCCAACTATT 120 consensus_9033#1 TTGCGACCACCTGCTTTGATTTTGGTTTTTATTTAATTTGTTACAGAACGGTTACGAAAA 65 consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 TCCTAAAAGTCGTGCAACTGCTCGACGAATACCCGAGATGTTTCA--TCGTCGGCGCTGA 178 consensus_9033#1 CAATTGGGCTAATGGAAGAATCTATAATGCGGCCAAACAGGTGGAATCGTTGGTGGATAG 125 consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 CAATGTCGGCTCCCGTCAGATGCAAACCATCCGTATGTCGCTCCGCGGTTCGGCCATCGT 238 consensus_9033#1 TGAGATACAGCACAACTTCAATGCGTGTGTAGCGCAGAACGGGTACTTCCTGAACTATCA 185 consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 GCTGATGGGCAAGAACACCATGATGCGCAAGGCCATTCGCGGGCATCTGGAGAACAACCA 298 consensus_9033#1 CAACATTCAGGAGATGTGCATCTACAGCAAGAAACGAACGCGCTATCGTAATCGGTGGAC 245 consensus_9033#2 ------------GACCT-CACCAGAAGCACAAAACCA-CGAGCTCTCGAGAGTGGGAGCG 46 consensus_9033#0 GAACCTGGAGAAGCTGCTCAACCACATCAAGGGCAACGTGGGCT-TCGTGTTCACCAAGG 357 * ** * * ** * *** *** consensus_9033#1 AAAGAAGTAGTG-GTTCGACAGTGCCCCATTCAATAAAGTTATGCCTTGCGTATGCTATT 304 consensus_9033#2 CCAAAAAAAATGCATTTCTTAACAGTTTTCACCCTGACGCTGTGCGGTGCGCTGACCGTC 106 consensus_9033#0 GCGATCTGGCCGAGATCCGCGACAAGCTGACCGAGAGCAAGGTGCGTGCCCCGGCCCGTG 417 * * * *** * * * consensus_9033#1 CCCTGTTGATCTTTTTAATTTC--ATGCTAGTGGATAATACGTCGACGTATCGGCGGCGG 362 consensus_9033#2 GCGCGCGG----CTGTGATGTA--CCGCTGGCGCACTACAAAACGATGCACTGCCAGCCG 160 consensus_9033#0 CCGGTGCGATCGCTCCGCTCGAGGTCGTCATCCCGGCCCAGAACACCGGTCTCGGTCCGG 477 * * * * * * * * * * consensus_9033#1 --CAGACATGATCCGACAAGATTCACGGAGTCCAGCGTTTCGAACGAACTGCAATACGCG 420 consensus_9033#2 GTCGGCAACCGTCCGGACGGTTGCCCGGAA-----AGGTACGACTGCCCCTCGATAACGG 215 consensus_9033#0 AGAAGACCTCCTTCTTCCAGGCCCTGTCGATCC--CGACCAAGATTTCCAAGGGTACGAT 535 * * * * * * * ** consensus_9033#1 ATCATTGCACAGTGGCA-GCTCTTCCTGGACC--TGCTGGAAGTACAGATGGCTGGCAAG 477 consensus_9033#2 CGCAC--GACAGCAGCA-AGTGTTACTTTAAT--GGCAAAACGTACGAC--ATCGATCAG 268 consensus_9033#0 TGAAATCATCAACGACGTGCCCATCCTGAAGCCGGGCGACAAGGTCGGC--GCTTCCGAG 593 * ** * * ** * ** * * * ** consensus_9033#1 GTCGAGCAG--------GAAGAACTTATCCCTGAAGTCAATGGTAGCAACGATATCA--T 527 consensus_9033#2 CCCGTGCCG--------GACGCGGAGGTGTCCCAGTTTTGCTCTGCCGCCTGCTACT--G 318 consensus_9033#0 GCCACGCTGCTCAACATGCTGAACATCTCGCCAAGTTCCAGGCTGGAGTCGCCAACCTGG 653 * ** * * * * * * * * * * consensus_9033#1 CCAAACATTCGCTC---ATCC--TTTCGAACGGTTGCTGGAAGCAGATATTCAATCGCCC 582 consensus_9033#2 CCG---ATCCGCTA---ATCCGATTGCTAAATTCCGCTGCGTGCACGTG---GACTGTGC 369 consensus_9033#0 CTGCCGTGTCGCTCCAGATCGGATACCCGACGCTGGCTTCGGTGCCGCACAGCATTGCCA 713 * **** *** * * * *** * * consensus_9033#1 ATAGACTGCGGTAACGTACGGCCGTAGAAATTA--TTCGCAAGCGACACCAGCTGCGATG 640 consensus_9033#2 GGAGTTTTTCAAGCGGTTCGATTACGACAACTGCGTGCGCCAGTACAGCCCGCAGAGCTG 429 consensus_9033#0 ACGGTTTCCGCAACCTGCTGGCCATTGCCGCCGTCACCGAGGTTGAGTTCAAGGAGGCCG 773 * * * ** * * * consensus_9033#1 AGCCTTGATTTTCGAGAT--TCGTCTGCTCGGTTAGGCATGCCGCTACACGTGAAGTCAC 698 consensus_9033#2 CTGCTCGAC---CGGGA----CGGTTGCCCGGAAAGGTACG--ACTGCCCCTCGA--TAA 478 consensus_9033#0 AAAC--GGTCAAGGAGTTCATCAAGGATCCGAGCAAGTTCGCCGCTGCCACGGCAA-CGA 830 * * * * * ** * * * ** * * consensus_9033#1 CTGTGCTGGAAGC-GCGTTAAACGTCGTAACAAATCCAGTTGCGCAGAAATTTTCACCAC 757 consensus_9033#2 CGGCGCACGACA--GCAGCAAGTGTTAC------TTTAATGGCAAAACGTACGACATCGA 530 consensus_9033#0 CTGCTTCCGCTGCCGCCCCAGCTGCCAA------GGCTGAGGAGAAGAAGGTGGAGTC-- 882 * * * ** * * * * * consensus_9033#1 TCAGTACGTCCAGCATGACGCGCGTTTACAGATCGGTTTCTTC--TCGCAGGTAGCTGAG 815 consensus_9033#2 TCAGCCCGTGCCGGACGCGGAGGTTTTTCAGTTTTGCTC--TG--CCGCCTGCTACTGC- 585 consensus_9033#0 CGAGTCCGAGGATGAGGATGAGGATATGGGCTTCGGTCTGTTCGATTAAATGCGACAGC- 941 ** ** * * * * * * * * * * * * consensus_9033#1 TGGGTTATTGCCCTCTTTGAACAGGGCACTCGTCCGCTCGAGATTCTGA-GCGACCGTTA 874 consensus_9033#2 CGATCCGCTAATCCGATTGCTAAATTCCGCTGCCCGCGGGAGTGGCGAATGCAAAACAAA 645 consensus_9033#0 AAGACGACGACCCACGCCGACCGCATGCGCCAGCAGCAGGTCGGTTGTTCCCAGACGGTG 1001 * * * ** * * consensus_9033#1 CCGTTCGCTGCAGCAAGTTCCCCGTCAAATGATCGATCGAATGATTCCAGTAGGCCAA-C 933 consensus_9033#2 CGGATATTTTTGTGAAGGGCACCGGTAGTAAGCCGGCC-----ACTGAACCGAAGCTA-C 699 consensus_9033#0 TGGTTCCCTGAGCTATATCTACTTTGGCACGGACGTTGTAGCTGCGAGCGTATACTCGTC 1061 * * * * * ** * consensus_9033#1 AGTGCTCGAGGAATTCCGCAGCT------------------------------------- 956 consensus_9033#2 AGTGCAAGT--------------------------------------------------- 708 consensus_9033#0 AAGGCTGGGGACGGCCCAATGGCGACACGCTGGCCATTCTTCTTGTTACGTACCAAAATA 1121 * ** * consensus_9033#1 ------------------------------------------------------------ consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 CGTATTTTTCTGTGAAACCAACTAAAGAGCAAAGCACATTAAAAGTAACACAAAAGCCGG 1181 consensus_9033#1 ------------------------------------------------------------ consensus_9033#2 ------------------------------------------------------------ consensus_9033#0 TGAGTCAGAATCGCAAGAGGAAACAATCCGGAAAGAAAAAAAACAAAAAAACAAAAAGGC 1241 consensus_9033#1 ------------------- consensus_9033#2 ------------------- consensus_9033#0 CACATGTGCCCCAGCCGCC 1260 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||