Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9036 cluster # 9036       Sequences # 13       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9036#0 length = 1357 sequences # 9  
consensus_9036#1 length = 659 sequences # 1  
consensus_9036#2 length = 500 sequences # 3  

consensusID : consensus_9036#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1357
fasta sequence
                              [AAGCTGTTGTTTTGCGGCAAACGTTTCGTGTTGGCGGTCGCGTCGCGCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAG-AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA-CCTCCGACCTGGAGGGTAACGACGAGGACGATGACG-TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACGACGAGGAGAACGCTTGGTACTGCACGATCTG-TCGCAGCAAACAGACGGTCGCCAAGCTGGCAACTCCAGCGGTGGTGCCCACACCGCCCATATCCGTCGCAACATCGCCGTCGCCAACAATTGGCAGCTCGTCGTCAAAGTCATCGTCCCATTCGAAGAGTGGTAGCAGCAGCAAGTCTGCCGAATCGTCATCCAGCTCTAGCTCGTCCAGCAGTAGCAAGCACAAATCATCCAAGAGTGGCAACAAATCGTCCGATTCTTCGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAGCGGGACCGTGATCGCGATCGTGACCG-CGACCGTGATCGCGAAAGAGAT-CGCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGCACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCAAAAAAGAAAAAAAAAAAAAAAA]

[+] EMBL CNS08G0H             [AAGCTGTTGTTTTGCGGCAAACGTTTCGTGTTGGCGGTCGCGTCGCGCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAG AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA CCTCCGACCTGGAGGGTAACGACGAGGACGATGACG TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGAATTCGGAAGCGGACGCCAACGACGAGGAGAATTCTTGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CNS098DC             [   cttcccTTTTGCGGCAAACGTTTCGTGTTGGCGGTCGCGTCGCGCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAG AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGTAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA CCTCCGACCTGGAGGGTAACGACGAGGACGATGACG TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAATACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACGACGAGGAGAACGCTTGGTACTGCACGATCTG TCGCAGCAAACAGACGGTCGCCAAGCTGGCAACTCCAGCGGTGGTGCCCACACCGCCCATATCCGTCGCAACATCGCCGTCGCCAACAATTGGCAGCTCGTCGTCAAAGTCATCGTCCCATTCGAAGAGTGGTAGCAGCAGCAAGTCTGCCGAATCGTCATCCAGCTCTAGCTCGTCCAGCAGTAGCAAGCACAAATCATCCAAGAGTGGCAACAAATCGTCCGATTCTTCGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCCCGATCCCGATC CGAGCGGGACCG                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CNS08VIW             [                            TGTTGGCGGTCGCGTCGCGCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAG AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA CCTCCGACCTGGAGGGTAACGACGAGGACGATGACG TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACGACGAGGAGAACGCTTGGTACTGCACGATCTG TCGCAGCAAACAGACGGTCGCCAAGCTGGCAACTCCAGCGGTGGTGCCCACACCGCCCATATCCGTCGCAACATCGCCGTCGCCAACAATTGGCAGCTCGTCGTCAAAGTCATCGTCCCATTCGAAGAGTGGTAGCAGCAGCAAGTCTGCCGAATCGTCATCCAGCTCTAGCTCGTCCAGCAGTAGCAAGCACAAATCATCCAAGAGTGGCAACAAATCGTCCGATTCTTCGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAGCGGGACCGTGATCGCGAT                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX604284             [                             GTTGGCGGTCGCGTCGCGCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAG AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA CCTCCGACCTGGAGGGTAACGACGAGGACGATGACG TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS098D3             [                                                                                 CATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAA CAG AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGTAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTATCCTCCGACCTGGAGGGTAACGACGAGGACGATGACG TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAATACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CNS09BTF             [                                                                                                                                    ACTCG CCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAA CAG AAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA CCTCCGACCTGGAGGGTAACGACGAGGACGATGACGCTCATCATGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACGACGAGGAGAACGCTTGGTACTGCACGATCTGTTCGCAGCAAACAGACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS094EH             [                                                                                                                                                                                                                                                                                     ATACGTGCGCAAGCAGAAAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAATGCATAGTGAGCGCACCGGTTTCACTGACCATGCCGCCGCTGTCGTCTGGTTCGATACTGATCTCTA CCTCCGACCTGGAGGGTAACGACGAGGACGATGACG TCATCATGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS098DD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACGACGAGGAGAACGCTTGGTACTGCACGATCTG TCGCAGCAAACAGACGGTCGCCAAGCTGGCAACTCCAGCGGT GTGCCCACACCGCCCATATCCGTCGCAACATCGCCGTCGCCAACAATTGGCAGCTCGTCGTCAAAGTCATCGTCCCATTCGAAGAGTGGTAGCAGCAGCAAGTCTGCCGAATCGTCATCCAGCTCTAGCTCGTCCAGCAGTAGCAAGCACAAATCATCCAAGAGTGGCAACAAATCGTCCGATTCTTCGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAACGGGACCGTGATCGCGATCGTGACCG CGACCGTGATCGCGAAAGAGAT CGCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGCACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCAAAAAAGAAAAAAAAAAAAAAAA]
[-] EMBL CNS094EI             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAAGAGTGGCAAAAAATCGTCCGATTCTTCGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATGGCGAGCGGGACCGTGATCGCGATCGTGCCCGCCGCCCGTGATCGCGAAAGGGATGCGCGATA                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_9036#0 AAGCTGTTGTTTTGCGGCAAACGTTTCGTGTTGGCGGTCGCGTCGCGCGCTCTAATTTAC AGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCAC TTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACG AACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGC ACCTTGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAGAAAGTAA TCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCG GTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGTCTG GTTCGATACTGATCTCTACCTCCGACCTGGAGGGTAACGACGAGGACGATGACGTCATCA TGGAGGAAGATAAGCTGAAAGAACTGGAAGACTTGATGTGTGTCGTTTGCCGCTTGATGG ACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGG AATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACGACGAGGAGAACGCTTGGTACT GCACGATCTGTCGCAGCAAACAGACGGTCGCCAAGCTGGCAACTCCAGCGGTGGTGCCCA CACCGCCCATATCCGTCGCAACATCGCCGTCGCCAACAATTGGCAGCTCGTCGTCAAAGT CATCGTCCCATTCGAAGAGTGGTAGCAGCAGCAAGTCTGCCGAATCGTCATCCAGCTCTA GCTCGTCCAGCAGTAGCAAGCACAAATCATCCAAGAGTGGCAACAAATCGTCCGATTCTT CGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAGC GGGACCGTGATCGCGATCGTGACCGCGACCGTGATCGCGAAAGAGATCGCGATAGGTCGT CCAAATCTTCTTCTAGCGGTGGTGGCACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGA ATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAG ATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGC ACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGG ATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGT AATGATTGCAAAGCAAAAAAGAAAAAAAAAAAAAAAA



consensusID : consensus_9036#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 659
fasta sequence
                              [CCCCGCGGTTATNCGTTTCGTGTTGGCGGCGCGTCGTNCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTTGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAGAAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCGCTGTCGTCTGGTTCGATACTGATCTCTACCTCTGACCTGGAGGGTAACGACGAGGACGATGACGTCATCATGGACGGAAGATAAGCTGAAAGAACTGGAAGACTTGACTGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACCGACGAGGAGAACGCTTGGTACTGAACG]

[+] EMBL AL692956             [CCCCGCGGTTATNCGTTTCGTGTTGGCGGCGCGTCGTNCGCTCTAATTTACAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTCTCCACTTGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAGAAAGTAATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATCGAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCGCTGTCGTCTGGTTCGATACTGATCTCTACCTCTGACCTGGAGGGTAACGACGAGGACGATGACGTCATCATGGACGGAAGATAAGCTGAAAGAACTGGAAGACTTGACTGTGTGTCGTTTGCCGCTTGATGGACGTTAGCTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACCGACGAGGAGAACGCTTGGTACTGAACG]


>consensus_9036#1 CCCCGCGGTTATNCGTTTCGTGTTGGCGGCGCGTCGTNCGCTCTAATTTACAGTTTTTAC TCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCACTTAAGCTTC TCCACTTGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGACGAACTCATCA AGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAGCACCTTGGCC GAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAGAAAGTAATCGAACCG AAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAACCGGTACGATC GAGTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCGCTGTCGTCTGGTTCGATAC TGATCTCTACCTCTGACCTGGAGGGTAACGACGAGGACGATGACGTCATCATGGACGGAA GATAAGCTGAAAGAACTGGAAGACTTGACTGTGTGTCGTTTGCCGCTTGATGGACGTTAG CTCCCGTAACCGGCTGGTCGAATGTGCCGACTGTCACGCACTGTACCATCAGGAATGCCA CAAACCCGTGATTTCGGAAGCGGACGCCAACCGACGAGGAGAACGCTTGGTACTGAACG



consensusID : consensus_9036#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 500
fasta sequence
                              [GGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAGCGGGACCGTGATCGCGATCGTGACCGCGACCGTGATCGCGAAAGAGAT-CGCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGAACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCATAATGTTGAGCTCGGATGAGAGATACAGAGCGTGAGGAGACAGACACACACACAA-TTTGCAAATTTAATAGAACAAATAT]

[-] EMBL CNS09BTG             [GGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAGCGGGACCGTGATCGCGATCGTGACCGCGACCGTGATCGCGAAAGAGAT CGCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGAACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCATAATGTTGAGCTCGGATGAGAGATACAGAGCGTGAGGAGACAGACACACACACAA TTTGCAAATTTAATAGAACA     ]
[-] EMBL CNS08G0I             [       TGACCGTGACCGAGGCGAG GGGATCGCGATCGCGAGCGGGACCGTGATCGCGATCGTGACCGCGACCGTGATCGCGAAAGAGATACGCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGCACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCATAATGTTGAGCTCGGATGAGAGATACAGAGCGTGAGGAGACAGACACACACACAATTTTGCAAATTTAATAGAACAAATAT]
[-] EMBL CNS098D4             [                                   GATCGCGAACGGGACCGTGATCGCGATCGTGACCGCGACCGTGATCGCGAAAGAGAT CGCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGAACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGC                                                                                                                                                                                                                                                                                                                                ]


>consensus_9036#2 GGGATCGTGACCGTGACCGAGGCGAGCGCGATCGCGATCGCGAGCGGGACCGTGATCGCG ATCGTGACCGCGACCGTGATCGCGAAAGAGATCGCGATAGGTCGTCCAAATCTTCTTCTA GCGGTGGTGGAACTGGCTCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTG CTGGAAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGATAAACGATTGCAAA TGATGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAA ATGAGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTT TATGTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCA TAATGTTGAGCTCGGATGAGAGATACAGAGCGTGAGGAGACAGACACACACACAATTTGC AAATTTAATAGAACAAATAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9036#0      AAGCTGTTGTTTTGCGGCAA-ACGTTTCGTGTTGGCGGTCGCGTCGCGCGCTCTAATTTA 59
consensus_9036#1      ---------CCCCGCGGTTATNCGTTTCGTGTTGGCGG-CGCGTCGTNCGCTCTAATTTA 50
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      CAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCA 119
consensus_9036#1      CAGTTTTTACTCTCGAAAATGGCATCAGCGCTAGATATTGATCCAACGTTCAAACATGCA 110
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      CTTAAGCTTCTCCACTCGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGAC 179
consensus_9036#1      CTTAAGCTTCTCCACTTGCCCCACTCGGATGCGACAGAAAAGATACGTAATCTGCTGGAC 170
consensus_9036#2      ---------------------------------------GGGAT-CGTGACCG--TGACC 18
                                                               *** *** * *   **  *

consensus_9036#0      GAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAG 239
consensus_9036#1      GAACTCATCAAGCAACGGTATGGCAGTGGGAAAACGCTAATTAACACCTTGAGCAAGAAG 230
consensus_9036#2      GAGGCGAGCGCG-ATCGCGATCGCGAGCGGGA--CCGTGATCGCGATCGTGACCGCGA-- 73
                      **    * *  * * **  ** **    ** *  *  * **    * * *** *  **  

consensus_9036#0      CACCTTG-CCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAGAAAGT 298
consensus_9036#1      CACCTTGGCCGAGGAGCCGCTTGCGGGTGGAAGCAATCTATACGTGCGCAAGCAGAAAGT 290
consensus_9036#2      --CCGTGATCGCGAAAGAGATCGCGAT---AGGTCGTCCAAATCTTCTT---CTAGCGGT 125
                        ** **  ** * *   * * ***     * *   ** * *  * *     *     **

consensus_9036#0      AATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAAC 358
consensus_9036#1      AATCGAACCGAAGCCCATCCCGGTGATAAATCTCGATCCGGATCCGGAACCGATCGCAAC 350
consensus_9036#2      GGTGGAACTGGC-TCCTCGTCGTCGTCCAGTGGGGCTGCGAATGCTGGCTCCAGTGCTGG 184
                        * **** *    **    **  *   * *   * * ** ** * *   * *  **   

consensus_9036#0      CGGTACGATCGA-GTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGCCGCTGTCGT 417
consensus_9036#1      CGGTACGATCGA-GTGCATAGTGAGCGCACCGGAAGCACTGACCATGCCGC-GCTGTCGT 408
consensus_9036#2      AAATTCGGTTGGCACACCGAACATTAACATCATCAGCGCAGAT-AAACGATTGCAAATGA 243
                         * ** * *     *  *       ** *   *** * **  *  *    **    * 

consensus_9036#0      CTGGTTCGATACTGATCTCTACCTCCGACCTGGAGGGTAACGACGAGGACGAT-GACGTC 476
consensus_9036#1      CTGGTTCGATACTGATCTCTACCTCTGACCTGGAGGGTAACGACGAGGACGAT-GACGTC 467
consensus_9036#2      TGAAGAAAAAGGCTGCCAAAATGCAAGATAGCAAAAGGAAGCACAAGTAGACTTGAAATG 303
                              *       *   *     **     *  * **  ** ** *   * **  * 

consensus_9036#0      ATCATGGA-GGAAGATAAGCTG-AAAGAACTGGAAGACTTGA-TGTGTGTCGTTTGCCGC 533
consensus_9036#1      ATCATGGACGGAAGATAAGCTG-AAAGAACTGGAAGACTTGACTGTGTGTCGTTTGCCGC 526
consensus_9036#2      AGCGTTATTGCACTATATGTTGCGAAAAAAAAGGATAAATGGATGTATGTCATTTTTTAT 363
                      * * *    * *  *** * **  ** **   * * *  **  *** **** ***     

consensus_9036#0      TTGATGG--ACGTTAGCTCCCGTA-ACCGGCTGGTCGAATGTGCCGACTGTCACGCACTG 590
consensus_9036#1      TTGATGG--ACGTTAGCTCCCGTA-ACCGGCTGGTCGAATGTGCCGACTGTCACGCACTG 583
consensus_9036#2      GTAATTGCTACATTTTTAGAAATATAATTATGGAAAGAATGTAATGATTGCAAAGCATAA 423
                       * ** *  ** **        ** *      *   ******   ** **  * ***   

consensus_9036#0      TACC-ATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAAC-GACGAGGAGA 648
consensus_9036#1      TACC-ATCAGGAATGCCACAAACCCGTGATTTCGGAAGCGGACGCCAACCGACGAGGAGA 642
consensus_9036#2      TGTTGAGCTCGGATGAGAGATACA-GAGCGTGAGGAGACAGACACACAC--ACAATTTGC 480
                      *    * *  * ***  * * **  * *  *  ***  * *** *  **  ** *   * 

consensus_9036#0      ACGCTTGGTACTGCACGATCTGTCGCAGCAAACAGACGGTCGCCAAGCTGGCAACTCCAG 708
consensus_9036#1      ACGCTTGGTACTGAACG------------------------------------------- 659
consensus_9036#2      AAATTTAATA--GAACAAATAT-------------------------------------- 500
                      *   **  **  * **                                            

consensus_9036#0      CGGTGGTGCCCACACCGCCCATATCCGTCGCAACATCGCCGTCGCCAACAATTGGCAGCT 768
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      CGTCGTCAAAGTCATCGTCCCATTCGAAGAGTGGTAGCAGCAGCAAGTCTGCCGAATCGT 828
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      CATCCAGCTCTAGCTCGTCCAGCAGTAGCAAGCACAAATCATCCAAGAGTGGCAACAAAT 888
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      CGTCCGATTCTTCGCACGAACGTGATAGGGATCGTGACCGTGACCGAGGCGAGCGCGATC 948
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      GCGATCGCGAGCGGGACCGTGATCGCGATCGTGACCGCGACCGTGATCGCGAAAGAGATC 1008
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      GCGATAGGTCGTCCAAATCTTCTTCTAGCGGTGGTGGCACTGGCTCCTCGTCGTCGTCCA 1068
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      GTGGGGCTGCGAATGCTGGCTCCAGTGCTGGAAATTCGGTTGGCACACCGAACATTAACA 1128
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      TCATCAGCGCAGATAAACGATTGCAAATGATGAAGAAAAAGGCTGCCAAAATGCAAGATA 1188
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      GCAAAAGGAAGCACAAGTAGACTTGAAATGAGCGTTATTGCACTATATGTTGCGAAAAAA 1248
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      AAGGATAAATGGATGTATGTCATTTTTTATGTAATTGCTACATTTTTAGAAATATAATTA 1308
consensus_9036#1      ------------------------------------------------------------
consensus_9036#2      ------------------------------------------------------------
                                                                                  

consensus_9036#0      TGGAAAGAATGTAATGATTGCAAAGCAAAAAAGAAAAAAAAAAAAAAAA 1357
consensus_9036#1      -------------------------------------------------
consensus_9036#2      -------------------------------------------------
                                                                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)