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Anopheles gambiae
cluster # 9049 cluster # 9049       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9049#0 length = 1149 sequences # 8  
consensus_9049#1 length = 1059 sequences # 5  
consensus_9049#2 length = 472 sequences # 1  

consensusID : consensus_9049#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1149
fasta sequence
                              [GAATNGCCCGAGGTTAACGGCATGCGGTCGCCATCCTGACCGACGCGGAGAAGCGACGCTCGTACGATCTGTACGGCTCGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAGCGCGCTACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGGAGCTGTTCAACATGTTCTTCGGGGCCGAAATTAACACCCAGCACGTGTACACGCGCCAGAGACGGTTTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTATTAACCTGCTGCCAATCATACTGCTTATCGCATTGTCGATGATGTCGTCGTTCTTCATTTCGGATCCCATCTACAGCCTTACGCCGAGCCAAAAATTCTCCGTCGCACGCAAAACGAACCAGCTGAAGATACCGTACTACGTGAAGGATAACTTTCACTCCGAGTACCAGGGGTCGGTCGGCCGGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGT------GTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCGGCGTTTTTCTACAGTGACGCAGTAGTTTGTTCTATGTTTCTCCCCTCTCCCCCTTTTTTATCGATGATTGCATTGGTTCAGCACGAAAGACATACACAGACACACACACACACGCACGCACGTGCCTGACCGTGCTTAGATTGTGCTTAAAGACTCCTCTCCTCGTCCCAGTTTTTAGGTACGGCATTTCTTCATCACGACGATAATGCCGGCTACAACCGGCAGCTTAGATAATTCATTGTAGAAAGGCGCGTGGCGCAAGTGGGGCTTTTAGGATGAAAATGGTGAGTGATAGGCAAATTTGTTGTTTTCATTTTTGT]

[+] EMBL AL933251             [GAATNGCCCGAGGTTAACGGCATGCGGTCGCCATCCTGACCGACGCGGAGAAGCGACGCTCGTACGATCTGTACGGCTCGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAGCGCGCTACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGGAGCTGTTCAACATGTTCTTCGGGGCCGAAATTAACACCCAGCACGTGTACACGCGCCAGAGACGGTTTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTATTAACCTGCTGCCAATCATACTGCTTATCGCATTGTCGATGATGTCGTCGTTCTTCATTTCGGATCCCATCTACAGCCTTACGCCGAGCCAAAAATTCTCCGTCGCACGCAAAACGAACCAGCTGAAGATACCGTACTACGTGAAGGATAACTTTCACTCCGAGTACCAGGGGTCGGTCGGCCGGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX602369             [                                                                                                                                                                                                                                                                                                      TTATTAACCTGCTGCCAATCATACTGCTTATCGCATTGTCGATGATGTCGTCGTTCTTCATTTCGGATCCCATCTACAGCCTTACGCCGAGCCAAAAATTCTCCGTCGCACGCAAAACGAACCAGCTGAAGATACCGTACTACGTGAAGGATAACTTTCACTCCGAGTACCAGGGGTCGGTCGGCCGGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGT      GTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGGAAGAGCGTCCGTGCGTGTGTGTGTGTGTTCCTGCAGTGGCGGCGTTTTTCTACAGTGACGCAGTAGTTTGTTCTATGTTTCTCCCCTCTC                                                                                                                                                                                                                                                                               ]
[+] EMBL BX615967             [                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTGAAGGATAACTTTCACTCCGAGTACCAGGGGTCGGTCGGCCGGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGT      GTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGG                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BX618044             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TCGGCCGGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGT      GTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCGGCGTTTTTCTACAGTGACGCAGTAGTTTGTTCTATGTTTCTCCCCTCTCCCCCTTTTTTATCGATGATTGCATTGGTTCAGCACGAAAGACATACACAGACACACACACACACGCACGCACGTGCCTGACCGTGCTTAGATTGTGCTTAAAGACTCCTCTCCT                                                                                                                                                             ]
[+] EMBL BX627592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTTTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGT      GTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCGGCGTTTTTCTACAGTGACGCAGTAGTTTGTTCTATGTTTCTCCCCTCTCCCCCTTTTTTATCGATGATTGCATTGGTTCAGCACGAAAGACATACACAGACACACACACACACGCACGCACGTGCCTGACCGTGCTTAGATTGTGCTTAAAGACTCCTCTC                                                                                                                                                               ]
[+] EMBL BM600842             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             cCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGTGTGTGGGTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGAAAGAGTGGCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCGGCGTTTTTCTACGGTGACGCAGTAGTTTGTTCTATGTTTCCCCCCTCCCCCCCTTTTTTATCGATGATTGCATTGGTTCAGCAGGAAAGACATACACAGACACACACACACACGCACGCACGTGCCTGACCGTGCTTAGATTGTGCTTAAAGACTCCTCTCCTCGTCCCAGTTTTTAGGTACGGCATTTCTTCATCACGACGATAATGCCGGCTACAACCGGCAGCTTAGATAATTCATTGTAGAAAGGCGCGTGGCGCAAGTGGGGCTTTTAGGATGAAAATGGTGAGTGATAGGCAAATTTGTTGTTTTCA       ]
[+] EMBL BX609700             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TTGGCGACCGAGAGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCAATGTACGTGTGTGT      GTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAGCACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCGGCGTTTTTCT                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08UJT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCATCACGACGATAATGCCGGCTACAACCGGCAGCTTAGATAATTCATTGCAGAAAGGCGCGTGGCGCAAGTGGGGCTTTTAGGATGAAAATGGTGAGTGATAGGCAAATTTGTTGTTTTCATTTTTGT]


>consensus_9049#0 GAATNGCCCGAGGTTAACGGCATGCGGTCGCCATCCTGACCGACGCGGAGAAGCGACGCT CGTACGATCTGTACGGCTCGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAGCGCGCT ACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGGAGCTGT TCAACATGTTCTTCGGGGCCGAAATTAACACCCAGCACGTGTACACGCGCCAGAGACGGT TTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTATTA ACCTGCTGCCAATCATACTGCTTATCGCATTGTCGATGATGTCGTCGTTCTTCATTTCGG ATCCCATCTACAGCCTTACGCCGAGCCAAAAATTCTCCGTCGCACGCAAAACGAACCAGC TGAAGATACCGTACTACGTGAAGGATAACTTTCACTCCGAGTACCAGGGGTCGGTCGGCC GGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCTACCGAG AGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAGAGCTTT ACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTACACAACT AGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACAGCTGAGCAATGTACGTGTGCA ATGTACGTGTGTGTGTGTGTGCATACGGGCGGACCACCATCCCTTTTTCTAATTCTGCAG CACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCGGCGTTTTTCTA CAGTGACGCAGTAGTTTGTTCTATGTTTCTCCCCTCTCCCCCTTTTTTATCGATGATTGC ATTGGTTCAGCACGAAAGACATACACAGACACACACACACACGCACGCACGTGCCTGACC GTGCTTAGATTGTGCTTAAAGACTCCTCTCCTCGTCCCAGTTTTTAGGTACGGCATTTCT TCATCACGACGATAATGCCGGCTACAACCGGCAGCTTAGATAATTCATTGTAGAAAGGCG CGTGGCGCAAGTGGGGCTTTTAGGATGAAAATGGTGAGTGATAGGCAAATTTGTTGTTTT CATTTTTGT



consensusID : consensus_9049#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1059
fasta sequence
                              [CCGCAGCAACTAGGATACACGGTGGAAGGCCCACGAATTTGCCTGCCAAAAAAGAAGAACAAGAAAAAGACAACAGTGGCAAGATAATGACACGGTTTGTGAACTGTGTCGATTAGATTTGAGCTGATTTCCACCTTTTTTCTCCGCCACCGCCGTCGCCGTCGTGTGTATTGCCGCTTCGTTGCGTAGACACCTCCTTCGCCGTTCCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATAAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAAAACTACTAAACAAATCGATTACTCTGCATCGGACGGAACGGGCCGAAGAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGGCGTAGCGAAGGATGCGACCGATTCGGACATCAAGAAAGCGTACAAGAAGCTGGCGCTGCAGCTCCACCCGGACAAAAACCATGCGCCCGGCGCGGTGGGAAGCATTTAAAGCGATCGGCAATGCGGTCGCCATCCTGACCGACGCGGACAAGCGACGCTCGTACGATCTGTACGGCTCGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAGCGCGCTACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGGAGCTGTTCAACATGTTCTTCGGGGCCGAAATTAACACCCAGCACGTGTACACGCGCCAGAGACGGTTTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTATTAACCTGCTGCCAATCATACTGCTTATCGCATTGT]

[+] EMBL BM609937             [CCGCAGCAACTAGGATACACGGTGGAAGGCCCACGAATTTGCCTGCCAAAAAAGAAGAACAAGAAAAAGACAACAGTGGCAAGATAATGACACGGTTTGTGAACTGTGTCGATTAGATTTGAGCTGATTTCCACCTTTTTTCTCCGCCACCGCCGTCGCCGTCGTGTGTATTGCCGCTTCGTTGCGTAGACACCTCCTTCGCCGTTCCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATAAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAAAACTACTAAACAAATCGATTACTCTGCATCGGACGGAACGGGCCGAAGAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACCGCCAAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM619977             [                                                           ccgGAAAAAGACAACAGTGGCAAGATAATGACACGGTTTGTGAACTGTGTCGATTAGATTTGAGCTGATTTCCACCTTTTTTCTCCGCCACCGCCGTCGCCGTCGTGTGTATTGCCGCTTCGTTGCGTAGACACCTCCTTCGCCGTTCCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATAAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAAAACTACTAAACAAATCGATTACTCTGCATCGGACGGAACGGGCCGAAGAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGGCGTAGCGAAGGATGCGACCGATTCGGACATCAAGAAAGCGTACAAGAAGCTGGCGCTGCAGCTCCACCCGGACAAAAACCATGCGCCCGGCGCGGTGGGAAGCATTTAAAGCGATCGGCAATGCGGTCGCCATC                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM622507             [                                                                   ccgCAACAGTGGCAAGATAATGACACGGTTTGTGAACTGTGTCGATTAGATTTGAGCTGATTTCCACCTTTTTTCTCCGCCACCGCCGTCGC   CGTGTGTATTGCCGCTTCGTTGCGTAGACACCTCCTTCGCCGTTCCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATAAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAAAACTACTAAACAAATCGATTACTCTGCATCGGACGGAACGGGCCGAAGAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGGCGTAGCGAAGGATGC                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM592284             [                                                                                                                                                                                                                                                                                                                          CCG GGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAAAACTACTAAACAAATCGATTACTCTGCATCGGACGGAACGGGCCGAAGAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM624575             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         cgacccACGCGTCCG CGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGGCGTAGCGAAGGATGCGACCGATTCGGACATCAAGAAAGCGTACAAGAAGCTGGCGCTGCAGCTCCACCCGGACAAAAACCATGCGCCCGGCGCGGT GGAAGCATTTAAAGCGATCGGCAATGCGGTCGCCATCCTGACCGACGCGGACAAGCGACGCTCGTACGATCTGTACGGCTCGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAGCGCGCTACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGGAGCTGTTCAACATGTTCTTCGGGGCCGAAATTAACACCCAGCACGTGTACACGCGCCAGAGACGGTTTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTATTAACCTGCTGCCAATCATACTGCTTATCGCATTGT]


>consensus_9049#1 CCGCAGCAACTAGGATACACGGTGGAAGGCCCACGAATTTGCCTGCCAAAAAAGAAGAAC AAGAAAAAGACAACAGTGGCAAGATAATGACACGGTTTGTGAACTGTGTCGATTAGATTT GAGCTGATTTCCACCTTTTTTCTCCGCCACCGCCGTCGCCGTCGTGTGTATTGCCGCTTC GTTGCGTAGACACCTCCTTCGCCGTTCCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGG CATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATAAAAATAAACCAT GAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAA AATCGAGAAAGCGGAAAAACTACTAAACAAATCGATTACTCTGCATCGGACGGAACGGGC CGAAGAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAA CACGTCGGACGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCGAAGGCGGA AAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAA GTGCAAAGATTACTACGAGGTGCTGGGCGTAGCGAAGGATGCGACCGATTCGGACATCAA GAAAGCGTACAAGAAGCTGGCGCTGCAGCTCCACCCGGACAAAAACCATGCGCCCGGCGC GGTGGGAAGCATTTAAAGCGATCGGCAATGCGGTCGCCATCCTGACCGACGCGGACAAGC GACGCTCGTACGATCTGTACGGCTCGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAG CGCGCTACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGG AGCTGTTCAACATGTTCTTCGGGGCCGAAATTAACACCCAGCACGTGTACACGCGCCAGA GACGGTTTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCT TTATTAACCTGCTGCCAATCATACTGCTTATCGCATTGT



consensusID : consensus_9049#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 472
fasta sequence
                              [AATCGCCCGAGGTNTATTCGTTGCGTAACACCTCCTATCGCCGTTACCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATANAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAATAACTACTAAACAAATCGATTACTCTGCATCGTGACGGAACGGGCCGAAGTAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCTGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGG]

[+] EMBL AL934490             [AATCGCCCGAGGTNTATTCGTTGCGTAACACCTCCTATCGCCGTTACCCCGTCTGCAGCCGTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGATTGTGGATANAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAATAACTACTAAACAAATCGATTACTCTGCATCGTGACGGAACGGGCCGAAGTAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACGGCCAAGGGAGCAGCACCTGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGCTGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGG]


>consensus_9049#2 AATCGCCCGAGGTNTATTCGTTGCGTAACACCTCCTATCGCCGTTACCCCGTCTGCAGCC GTCGTGTCGTCGTAACAGGGCATCTTTTCTGTGCGGGGTGGTTCGGGATAGCACCCGGAT TGTGGATANAAAATAAACCATGAACAAGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGT GAAGTACCTGGCCGAGGGGAAAATCGAGAAAGCGGAAATAACTACTAAACAAATCGATTA CTCTGCATCGTGACGGAACGGGCCGAAGTAGCTGCTAAATAAAATCAAATGTGGAGCGTA CGCGGAAAGTGCCACCTCCGGCAACACGTCGGACGACGGCGTGCGGCAGCGGACCACGGC CAAGGGAGCAGCACCTGAAGGCGGAAAGTGGCAACGAGGCGGAATACACACCGGAACAGC TGGAGGCGGTGAAGCGGATTAAGAAGTGCAAAGATTACTACGAGGTGCTGGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9049#1      ----------------------------------CCGCAGCAACTAGGATACACGGTGGA 26
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      GAATNGCCCGAGGTTAACGGCATGCGGTCGCCATCCTGACCGACGCGGAGAAGCGACGCT 60
                                                                                  

consensus_9049#1      AGGCCCACGAATTTGCCTGCCAAAAAAGAAGAACAAGAAAAAGACAACAGTGGCAAGATA 86
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      CGTACGATCTGTACGGCT--CGGAGGAGCACCATCAGCCGGCGACGGCGCGCAAAGCGCG 118
                                                                                  

consensus_9049#1      ATGACACGGTTTGTGAACTGTGTCGATTAGATTTGAGCTG--ATTTCCACCTTTTTTCTC 144
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      CTACCACCACGACTACGCGTACTCGCGTGGGTTCGAGACGGAATTTACGGCGGAGGAGCT 178
                                                                                  

consensus_9049#1      CGCCACCGCCGTCGCCGTCGTGTGTATTGCCGCTTCGTTGCGTAGACAC-CTCCT-TCGC 202
consensus_9049#2      ---------------AATCGCCCGAGGTNTA--TTCGTTGCGTA-ACAC-CTCCTATCGC 41
consensus_9049#0      GTTCAACATGTTCTTCGGGGCCGAAATTAACA-CCCAGCACGTGTACACGCGCCAGAGAC 237
                                         *       *       *    ***  **** * **     *

consensus_9049#1      CGTT-CCCCGT------CTGCAGCCGT-CGTGTCGTCGTAA-CAGGGCATCTTTTCTGTG 253
consensus_9049#2      CGTTACCCCGT------CTGCAGCCGT-CGTGTCGTCGTAA-CAGGGCATCTTTTCTGTG 93
consensus_9049#0      GGTTTCACCGGGCGGAACAGCAGCAGTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTA 297
                       *** * ***       * ***** ** *  *  * *  *  *****  *     ** * 

consensus_9049#1      CGGGGTGGTTCGGGATAGCACC------CGGATTGTGGATAAAAA--TAAACCATGAACA 305
consensus_9049#2      CGGGGTGGTTCGGGATAGCACC------CGGATTGTGGATANAAAA-TAAACCATGAACA 146
consensus_9049#0      TTAACCTGCTGCCAATCATACTGCTTATCGCATTGTCGATGATGTCGTCGTTCTTCATTT 357
                             * *    **   **       ** ***** ***       *    * * *   

consensus_9049#1      AGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCG 365
consensus_9049#2      AGGAAGCAGCCGAGGACTGTGTGGAGCGAGCGGTGAAGTACCTGGCCGAGGGGAAAATCG 206
consensus_9049#0      CGGATCCCATCTACAGCCTTACGC--CGAGCCA-AAAATTCTCCGTCGCACGCAAAACGA 414
                       ***  *   * *   *  *  *   *****    ** * *   * **   * ****   

consensus_9049#1      AGAAAGCGGAAA-A----ACTACTAAACAAATCGATTACTCT----GCATCG------GA 410
consensus_9049#2      AGAAAGCGGAAATA----ACTACTAAACAAATCGATTACTCT----GCATCGT-----GA 253
consensus_9049#0      ACCAGCTGAAGATACCGTACTACGTGAAGGATAACTTTCACTCCGAGTACCAGGGGTCGG 474
                      *  *   * * * *    *****   *   **   ** * **    * * *       * 

consensus_9049#1      CGGAACGGGCCGAAG-AGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCC 469
consensus_9049#2      CGGAACGGGCCGAAGTAGCTGCTAAATAAAATCAAATGTGGAGCGTACGCGGAAAGTGCC 313
consensus_9049#0      TCGGCCGGCTGGAAGCATCGGTGGAGGAGGAATATTTGAACAATCTAAAGCATTCCTGCT 534
                        *  ***   **** * * *   *  *  *  *  **   *   **         *** 

consensus_9049#1      ACCTCCGGCAACACGTCGGACG-ACGGCGT-----GCGGCAGCGGACCACGGCCAA-GGG 522
consensus_9049#2      ACCTCCGGCAACACGTCGGACG-ACGGCGT-----GCGGCAGCGGACCACGGCCAA-GGG 366
consensus_9049#0      ACCGAGAGCGGAACTACAAAGACACGATGCTAATGAAGGCACGGAACTTTGGCGACCGAG 594
                      ***    **   **  *  *   ***  *        ****  * **   *** *  * *

consensus_9049#1      AGCAGCACC-GAAGGCGGAAAGTGGCAACGAGGCGG-----AATACACACCGGAACAGCT 576
consensus_9049#2      AGCAGCACCTGAAGGCGGAAAGTGGCAACGAGGCGG-----AATACACACCGGAACAGCT 421
consensus_9049#0      AGCTTTACCATAAGGCGCAAAGCATCAACACACCGTCTTGTGATAAATTACAAAGTTTAC 654
                      ***   ***  ****** ****   ****    **       *** *   *  *      

consensus_9049#1      GGAGGCGGTGAAGCGGA-TTAAGAAGTGCAAAGATTACTACGAGGTGCTGGGCGTAGCGA 635
consensus_9049#2      GGAGGCGGTGAAGCGGA-TTAAGAAGTGCAAAGATTACTACGAGGTGCTGGG-------- 472
consensus_9049#0      ACAACTAGTCAAATGCAGCCAAATCGTGGTTTTTCGACCACGACA-GCTGAGCAATGT-A 712
                        *    ** **  * *   **   ***        ** ****   **** *        

consensus_9049#1      AGGATGCGACCGATTCGGACATCAAGAAAGCGTACAAGAAGCTGGCGCTGCAGCTCCACC 695
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      CGTGTGCAATGTACGTGTGTGT---GTGTGTGCATACGGGCGGACCACCATCCCTTTTTC 769
                                                                                  

consensus_9049#1      CGGACAAAAACCATGCGCCCGGCGCGGTGGGAAGCATTTAAAGCGATCGGCAATGCGGTC 755
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      TAATTCTGCAGCACGTGGGAAGAGCGTCGGTGCGTGTGTGTGTGTGTTCGTGCAGTGGCG 829
                                                                                  

consensus_9049#1      GCCATCCTGACCGACGCGGACAAGCGACGCTCGTACGATCTGTACGGCTCGGAGGAGCAC 815
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      GCGTTTTTCTACAGTGACG-CAGTAGTTTGTTCTATGTTTCTCCCCTCTCCCCCTT-TTT 887
                                                                                  

consensus_9049#1      CATCAGCCGGCGACGGCGCGCAAAGCGCGCTACCACCACGACTACGCGTACTCGCGTGGG 875
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      TATCGATGATTGCATTGGTTCAGCACGAAAGACATACACAGACACACACACACACGCACG 947
                                                                                  

consensus_9049#1      TTCGAGACGGAATTTACGGCGGAGGAGCTGTTCAACATGTTCTTCGGGGCCGAAATTAAC 935
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      CACGTGCCTGACCGTGCTTAGATTGTGCTTAAAGACTCCTCTCCTCGTCCCAGTTTTTAG 1007
                                                                                  

consensus_9049#1      ACCCAGCACGTGTACAC----GCGCCAGAGACGGTTTCACCGGGCGGAACAGCAG---CA 988
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      GTACGGCATTTCTTCATCACGACGATAATGCCGGCTACAACCGGCAGCTTAGATAATTCA 1067
                                                                                  

consensus_9049#1      GTACAGGGAGCCCCAGTCAGGGATTGCCGCCTTTATTAACCTGCTGCCAATCATACTGCT 1048
consensus_9049#2      ------------------------------------------------------------
consensus_9049#0      TTGTAGAAAGGCGCGTGGCGCAAGTGGGGCTTTTAGGATGAAAATGGTGAGTGATAGGCA 1127
                                                                                  

consensus_9049#1      TATCGCATTGT----------- 1059
consensus_9049#2      ----------------------
consensus_9049#0      AATTTGTTGTTTTCATTTTTGT 1149
                                            




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)