Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Anopheles gambiae
cluster # 9052 cluster # 9052       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9052#0 length = 1202 sequences # 2  
consensus_9052#1 length = 1137 sequences # 6  
consensus_9052#2 length = 1058 sequences # 6  

consensusID : consensus_9052#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1202
fasta sequence
                              [GTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTTCGCGTTTGCGGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTCTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACATCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGACGGAGCAACCGTGCGTGATCTATCGCTAACGTCGGTCGGTCAGCTGGTTGCGTAACAATTTGCGCACGGCAAGGAACCAGCTGGGCAGCGGCAGTAGCAACAGCAACCCAATTCCAATGTACAGTGGAAGTAGCAATCGTAGCGTACTGGAGAGCTTGGGCATGGTCCAGCGTGCTAACGGCAACAAGGTGCCGAAACACCCGATCGGCTTGCTGGTGGAGGAAGCGCGCACGAACCAGCTGGTCAGCCTAGGCGATGGTTTTGCGCTGCAGCTGCCAGAAACTCTCGAGCTGCACACGACCTATTTGCTGCCGCCAGCAATGGGCAGCCAGTTCCTCTACCAGCTGCAGCGACAGCGCAAAATCTGGTGGATGCGTTGGTCCGTCGATCCGGGCCGGTATTTCATCTCCGACATGAGGCGCGACGAAGCAGACCAGGGGCCGGACGACGGCCGTATCGATCTGTGCCCGGGTTTCTGGACCGGTCCGAGCACGCGCAGATGGTCGAGCTGGG]

[+] EMBL BX621157             [GTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTTCGCGTTTGCGGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTCTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACATCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGACGGAGCAACCGTGCGTGATCTATCGCTAACGTCGGTCGGTCAGCTGGTTGCGTAACAATTTGCGCACGGCAAGGAACCAGCTGGGCAGCGGCAGTAGCAACAG                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX624417             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       CGAGCGTAAGTCTTCGTCGCACACACACACATCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGACGGAGCAACCGTGCGTGATCTATCGCTAACGTCGGTCGGTCAGCT GTTGCGTAACAATTTGCGCACGGCAAGGAACCTCCTGGGCAGCGGCAGTAGCAACAGCAACCCAATTCCAATGTACAGTGGAAGTAGCAATCGTAGCGTACTGGAGAGCTTGGGCATGGTCCAGCGTGCTAACGGCAACAAGGTGCCGAAACACCCGATCGGCTTGCTGGTGGAGGAAGCGCGCACGAACCAGCTGGTCAGCCTAGGCGATGGTTTTGCGCTGCAGCTGCCAGAAACTCTCGAGCTGCACACGACCTATTTGCTGCCGCCAGCAATGGGCAGCCAGTTCCTCTACCAGCTGCAGCGACAGCGCAAAATCTGGTGGATGCGTTGGTCCGTCGATCCGGGCCGGTATTTCATCTCCGACATGAGGCGCGACGAAGCAGACCAGGGGCCGGACGACGGCCGTATCGATCTGTGCCCGGGTTTCTGGACCGGTCCGAGCACGCGCAGATGGTCGAGCTGGG]


>consensus_9052#0 GTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTT CGCGTTTGCGGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTC TCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGG TCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGAG CCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTG CTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGAC TCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTAC AGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGC CAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCG GGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACATC AGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGG CAGAGTAGCTTTGTCGATTTTCGGCTGGACGGAGCAACCGTGCGTGATCTATCGCTAACG TCGGTCGGTCAGCTGGTTGCGTAACAATTTGCGCACGGCAAGGAACCAGCTGGGCAGCGG CAGTAGCAACAGCAACCCAATTCCAATGTACAGTGGAAGTAGCAATCGTAGCGTACTGGA GAGCTTGGGCATGGTCCAGCGTGCTAACGGCAACAAGGTGCCGAAACACCCGATCGGCTT GCTGGTGGAGGAAGCGCGCACGAACCAGCTGGTCAGCCTAGGCGATGGTTTTGCGCTGCA GCTGCCAGAAACTCTCGAGCTGCACACGACCTATTTGCTGCCGCCAGCAATGGGCAGCCA GTTCCTCTACCAGCTGCAGCGACAGCGCAAAATCTGGTGGATGCGTTGGTCCGTCGATCC GGGCCGGTATTTCATCTCCGACATGAGGCGCGACGAAGCAGACCAGGGGCCGGACGACGG CCGTATCGATCTGTGCCCGGGTTTCTGGACCGGTCCGAGCACGCGCAGATGGTCGAGCTG GG



consensusID : consensus_9052#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1137
fasta sequence
                              [GCGACGCGGCTATTCAAA-AACGACCATCACACAACGCTGTCCCTTGGCAGGGGAA-ATCCAGCTAGTCAAACAAACGAAAAGAAAAAAAATCATTCAAGTGTTAATTAATGTCTTTTCACTAACTGTCCGCTCAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGCTACCCTGCCGGGACGGGTACGTGCGCCA-CTGTACCGCTACTACCGCAAGGGCGATCAGTTTCCGCCCGCCCTCTACATCTATGGCCAATCATCGACCGGGAAAGGTGCGATCTTGCGCGAAGTGTTCCGGTGCCGGTCGGCCGCGGACGAATCGCTGCGGTGCGCCCAGCTGAGCGCGATCAGCTGCTACACCAACAAGATACTGTTCGAAACGATCGTCCGCCAGCT-GGAGGGCGCAGAGCTG-TCGCAGTCCAACCACTACAGCATCGACTGCAAGCTCGAGTACGCAAAGGACTTCC-TTGCCGCGCTGCGCCAGCGGCTCGATCCAGCCCGCTCGTACGTGATCGTGGTGCGCC-ATGCGGAGCGGCTGCGCGACATGGCCCACAACCTGCTGCCACTGTTTCTGCAGCTGCCGGAAGCGACCGGGCTGAACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGTTCGAAAAGTTCTACACCAAAGCGGGAC-TGCCGCC-GGTGGTGAAGCTGTT-CGTGGCGGAGTACACTCGCGCCGACATGCA-GCGCATTCTGATGAACGATTACGCGCCGCACGTGCAGGGACTTGGCGGGCAACGGTCCGCCCCCGACCAGCTCTGGCTAGCCGCGATCACGGAGGAGTTCCATCGCAACTACGTTAGTCTGTTTCTCGGCACCTTCTGGAAGGTGTGCCGCGACGTGAAGGAGTTCGCCTGGTGGCGGCCGAATGTTTCCCCGCCTACTGTGAGCCGGTGCGGGACGGCACCATACCGGCGCACGATTCGATGAAGCTGTGGCGCAGCACGTAGGTTAGATGCTTCGAGAGGTCAATCAAGTCATTCCGCACGTTAGCAACTGTCGGTGGAGGAGGAGAGAAAAGAGATAATTTAAATTT-GAGACTACGT-TACTTCTACGCAGTGCTGCAAAATGTCACTGTCACTGTGTAATGTCAAAATGTCACTGTGTAATA]

[+] EMBL CNS08SJ4             [GCGACGCGGCTATTCAAA AACGACCATCACACAACGCTGTCCCTTGGCAGGGGAA ATCCAGCTAGTCAAACAAACGAAAAGAAAAAAAATCATTCAAGTGTTAATTAATGTCTTTTCACTAACTGTCCGCTCAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGCTGCCCTGCCGGGACGGGTACGTGCGCCA CTGTACCGCTACTACCGCAAGGGCGATCAGTTTCCGCCCGCCCTCTACATCTATGGCCAATCATCGACCGGGAAAGGTGCGATCTTGCGCGAAGTGTTCCGGTGCCGGTCGGCCGCGGACGAATCGCTGCGGTGCGCCCAGCTGAGCGCGATCAGCTGCTACACCAACAAGATACTGTTCGAAACGATCGTCCGCCAGCTGGGAGGGCGCAGAGCTGCTCGCAGTCCAACCACTACAGCATCGACTGCAAGCTCGAGTACGCAAAGGACTTCC TTGCCGCGCTGCGCCAGCGGCTCGATCCAGCCCGCTCGTACGTGATCGTGGTGCGCC ATGCGGAGGGGCTGCGCGACATGGCCCACAACCTGCTGCCACTGTTTCTGCAGCTGCCGGAAGCGACCGGGCTGAACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGTTCGAAAAGTTCTACACCAAAGCGGGACTTGTTGCC GGTGGTGAAGCTGTT CGTGGCGGAGTACACTCGCGCCGACATGCA GCGCATTCTGATGAACGATTACGCGCCGCACGTGCAGGGACTTGGCGGGCAACGGTCCGCCCCCGACCAGCTCTGGCTAGCCGCGATCACGGAGGAGTTCCATCGCAACTACGTTAGTCTGTTTCTCGGCACCTTCTGGAAGG                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS08HXT             [         CTATTCAAACAACGACCATCACACAACGCTGTCCCTTGGCAGGGGAATATCCAGCTAGTCAAACAAACGAAAAGAAAAAAAATCATTCAAGTGTTAATTAATGTCTTTTCACTAACTGTCCGCTCAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGCTACCCTGCCGGGACGGGTACGTGCGCCA CTGTACCGCTACTACCGCAAGGGCGATCAGTTTCCGCCCGCCCTCTACATCTATGGCCAATCATCGACCGGGAAAGGTGCGATCTTGCGCGAAGTGTTCCGGTGCCGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BX623517             [                                                                                             ATTCAAGTGTTAATTAATGTCCTTTCACTAACTGTCCGCTCAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGCTACCCTGCCGGGACGGGTACGTGCGCCAGCTGTACCGCTACTACCGCAAGGGCGATCAGTTTCCGCCCGCCCTCTACATCTATGGCCAATCATCGACCGGGAAAGGTGCGATCTTGCGCGAAGTGTTCCGGTGCCGGTCGGCCGCGGACGAATCGCTGCGGTGCGCCCAGCTGAGCGCGATCAGCTGCTACACCAACAAGATACTGTTCGAAACGATCGTCCGCCAGCT GGAGGGCGCAGAGCTG TCGCAGTCCAACCACTACAGCATCGACTGCAAGCTCGAGTACGCAAAGGACTTCC TTGCTGCGCTGCGCCAGCGGCTCGATCCAGCCCGCTCGTACGTGATCGTGGTGCGCC ATGCGGAGCGGCTGCGCGACATGGCCCACAACCTGCTGCCACTGTTTCTGCAGCTGCCGGAAGCGACCGGGCTGAACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGTTCGAAAAGTTCTACACCAAAGCGGGAC TGCCGCC GGTGGTGAAGCTGTT CGTGGCGGAGTACACTCGCGCCGACATGCA GCGCATTCTGATGAACGATTACGCGCCGCACGTGCAGGGACTTGGCGGGCAACGGTCCGCCCCCGACCAGCTCTGGCTAGCCGCGATCACGGANGAGTTCCATCGCAACTACGTTAGTCTGNTTCTCNGCAC                                                                                                                                                                                                                                                                                                       ]
[+] EMBL BM618360             [                                                                                                                                  ccgCAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGCTACCCTGCCGGGACGGGTACGTGCGCCAGCTGTACCGCTACTACCGCAAGGGCGATCAGTTTCCGCCCGCCCTCTACATCTATGGCCAATCATCGACCGGGAAAGGTGCGATCTTGCGCGAAGTGTTCCGGTGCCGGTCGGCCGCGGACGAATCGCTGCGGTGCGCCCAGCTGAGCGCGATCAGCTGCTACACCAACAAGATACTGTTCGAAACGATCGTCCGCCAGCT GGAGGGCGCAGAGCTG TCGCAGTCCAACCACTACAGCATCGACTGCAAGCTCGAGTACGCAAAGGACTTCC TTGCCGCGCTGCGCCAGCGGCTCGATCCAGCCCGCTCGTACGTGATCGTGGTGCGCCAATGCGGAGCGGCTGCGCGACATGGCCCACAACC  CTGCCACTGTTTCTGCAGCTGCCGGAAGCGACCGGGCTGAACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGTTCGAAAAGTTCTACACCAAAGCGGGAC TGCCGCCGGGGGGTGAAGCTGTTCCGTGGCGGAGTACACTCGCGCCGACATGCA GCGCATTCTGATGAACGATTACGCGCCGCACGTGCA                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS08SJ5             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                     gaaaaaaaaAAAGGACTTCCTTTGCCGCG TGCGCCAGCGGCTCGATCCAGCCCGCTCGTACGTGATCGTGGTGCGCC ATGCGGAGCGG TGCGCGACATGGCCCACAACCTGCTGCCACTGTTTCTGCAGCTGCCGGAAGCGACCGGGCTGAACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGTTCGAAAAGTTCTACACCAAAGCGGGAC TGCCGCC GGTGGTGAAGCTGTT CGTGGCGGAGTAAACTCGCGCCGACATGCACGCGCATTCTGATGAACGATTACGCGCCGCACGTGCAGGGACTTGGCTGGCAACGGTCCGCCCCCGACCAGCTCTGGCTAGCCGCGATCACGGAGGAGTTCCATCGCAACTACGTTAGTCTGTTTCTCGGCACCTTCTGGAAGGTGTGCCGCGACGTGAAGGAGTTCGCCTGGTGGCGGCCGAATGTTTCCCCGCCTACTGTGAGCCGGTGCGGGACGGCACCATACCGGCGCACGATTCGATGAAGCTGTGGCGCAGCACGTAGGTTAGATGCTTCGAGAGGTCAATCAAGTCATTCCGCACGTTAGCAACTGTCGGTGGAGGAGGAGAGAAAAGAGATAATTTAAATTT GAGACTACGT TACTTCTACGCAGTGCTGCAAAATGTCACTGTCACTGTGTAATGTCAAAATGTCACTGTGTAATA]
[-] EMBL CNS08HXU             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GCACGATTCGATGAAGCTGTGGCGCAGCACGTAGGTTAGATGCTTCGAGAGGTCAATCAAGTCATTCCGCACGTTAGCAACTGTCGGTGGAGGAGGAGAGAAAAGAGATAATTTAAATTTAGAGACTACGTATACT                                                             ]


>consensus_9052#1 GCGACGCGGCTATTCAAAAACGACCATCACACAACGCTGTCCCTTGGCAGGGGAAATCCA GCTAGTCAAACAAACGAAAAGAAAAAAAATCATTCAAGTGTTAATTAATGTCTTTTCACT AACTGTCCGCTCAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGCTACCCTGCCGG GACGGGTACGTGCGCCACTGTACCGCTACTACCGCAAGGGCGATCAGTTTCCGCCCGCCC TCTACATCTATGGCCAATCATCGACCGGGAAAGGTGCGATCTTGCGCGAAGTGTTCCGGT GCCGGTCGGCCGCGGACGAATCGCTGCGGTGCGCCCAGCTGAGCGCGATCAGCTGCTACA CCAACAAGATACTGTTCGAAACGATCGTCCGCCAGCTGGAGGGCGCAGAGCTGTCGCAGT CCAACCACTACAGCATCGACTGCAAGCTCGAGTACGCAAAGGACTTCCTTGCCGCGCTGC GCCAGCGGCTCGATCCAGCCCGCTCGTACGTGATCGTGGTGCGCCATGCGGAGCGGCTGC GCGACATGGCCCACAACCTGCTGCCACTGTTTCTGCAGCTGCCGGAAGCGACCGGGCTGA ACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGTTCGAAAAGTTCTACACCAAAGCGGGAC TGCCGCCGGTGGTGAAGCTGTTCGTGGCGGAGTACACTCGCGCCGACATGCAGCGCATTC TGATGAACGATTACGCGCCGCACGTGCAGGGACTTGGCGGGCAACGGTCCGCCCCCGACC AGCTCTGGCTAGCCGCGATCACGGAGGAGTTCCATCGCAACTACGTTAGTCTGTTTCTCG GCACCTTCTGGAAGGTGTGCCGCGACGTGAAGGAGTTCGCCTGGTGGCGGCCGAATGTTT CCCCGCCTACTGTGAGCCGGTGCGGGACGGCACCATACCGGCGCACGATTCGATGAAGCT GTGGCGCAGCACGTAGGTTAGATGCTTCGAGAGGTCAATCAAGTCATTCCGCACGTTAGC AACTGTCGGTGGAGGAGGAGAGAAAAGAGATAATTTAAATTTGAGACTACGTTACTTCTA CGCAGTGCTGCAAAATGTCACTGTCACTGTGTAATGTCAAAATGTCACTGTGTAATA



consensusID : consensus_9052#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1058
fasta sequence
                              [CAAAGCACGCATGGAGCAGTCACCTTAGTTTCCGATTCGAATCTCTGCCGTACGATACTGAGTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTTCGCGTTTGC-GGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTCTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACATCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGAACGGTTGGAGCTG-TCCGAGGGCGAGCGGGTGGGCGAGCGGCAGGCAGCAATAGTGCGCGTGAAGATTCACCGCAAAATAGCTCCATATAAGTGCGGTATCGTCTGTGCGGGGGAAGATGCTACAGTTGCTAACGTGCGGAATGACTTGATTGACCTCTCGAAGCATCTAACCTACGTGCTGCGCGCCGCCAACCTTCCTGTCCACGAAAGCTTCTCCTTC-GAAACAGTTCGCC-GGCGCTGGATCGGCTGGATCAAATCGGCGTACCGTACGTCCTGCTCCTAGGGGCCGG-AACTGCGCACCGGCCTGC]

[+] EMBL CNS09MHS             [CAAAGCACGCATGGAGCAGTCACCTTAGTTTCCGATTCGAATCTCTGCCGTACGATACTGAGTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTTCGCGTTTGC GGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTCTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAGCCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGCTATCGTTCGTAGATTTGGACAGCCAGGGAGCCCTCGGCACGCTGCAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACATCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGAACGGTTGGAGCTG TCCGAGGGCGAGCGGGTGGGCGAGCGGCAGGCAGCAATAGTGCGCGTGAAGATTCACCGCAAAATAGCTCCATATAAGTGCGGTATCGTCTGTGCGGGGGAAGATGCTACAGTTGCTAACGTGCGGAATGACTTGATTGACCTCTCGAAGCATCTAACCTACGTGCTGCGCGCCGCCAACCTTCCTGTCCACG                                                                                                         ]
[+] EMBL CNS095IM             [             GAG AGTCA CTTAGTTTCCGATTCGAATCTCTGCCGTACGATACTGAGTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTTCGCGTTTGCGGGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTCTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGCTATCGCT GTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGACTCGATTGACTTTGCGTCGCGCATTCTGCCCATCGGCAGGGGGGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CNS0993O             [                         TAGTTTCCGATTCGAATCTCTGCCGTACGATACTGAGTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGTTCGCGTTTGC GGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTTCTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGCTATTGC GGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACTTCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGC                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CNS09MHT             [                                                                                                                                                                                         taACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTGGTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGAAAACGCACCGGTCAACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCTTCAGCCACCAAACAGTGCGCCTGCTCGAGCGG TATCGCTCGTAGATTTGGACAGCCAGGGAGCCCTCGGCACGCTGCAGAACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGAACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGAAAAAACAAACATCAGTAGCAGAAGTTTGGAACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGAACGGTTGGAGCTGAACCGAGGGCGAGCGGGTGGGCGAGCGGCAGGCAGCAATAGTGCGCGTGAAGATTCACCGCAAAATAGCTCCATATAAGTGCGGTATCGTCTGTGCGGGGGAAGATGCTACAGTTGCTAACGTGCGGAATGACTTGATTGACCTCTCGAAGCATCTAACCTACGT CTGCGCGCCGCCAACCTTCCTGTCCACGAAAGCTTCTCCTTCGGAAACAGTTCGCC GGCGCTGGATCGGCTGGATCAAATCGGCGTACCGTACGTCCTGCTCCTAGGGGCCGG AACTGCGCACCGGCCTGC]
[-] EMBL CNS0993P             [                                                                                                                                                                                                                                                                                                              CCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCTGCTCGAGCGGGTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCCCGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACATCAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGAACGGTTGGAGCCC GCCCA GGCCAGCGGGTGGGCGAGCGGCAGGCAGCAAT                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS095IN             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGGAACGGTTGGAGCTG TCCCAGGGCGAGCGGGTGGGCGAGCGGCAGGCAGCAATAGTGCGCGTGAAGATTCACCGCAAAATAGCTCCATATAAGTGCGGTATCGTCTGTGCGGGGGAAGATGCTACAGTTGCTAACGTGCGGAATGACTTGATTGACCTCTCGAAGCATCTAACCTACGTG TGCGCGCCGCCAACCTTCCTGTCCACGAAAGCTTCTCCTTC GAATCAGTTCGCCGGGCGCTGGATCGGCTGGATCAAATCGGCGTACCGTACGTCCTGCTCCTAGGGGCCGGAAACTGCGCACCGG     ]


>consensus_9052#2 CAAAGCACGCATGGAGCAGTCACCTTAGTTTCCGATTCGAATCTCTGCCGTACGATACTG AGTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGGT TCGCGTTTGCGGCATGCTGCGTTGCTTTGTGGTCGCGCGAAGGTTGTCACCGAGAAGCTT CTCCTCACTGCAGCCAACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTACCTG GTCGGAGCGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCAACCGA GCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTGCGCCT GCTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTGCAGGA CTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCGGCACGGACGGCGTGGAACCGCTCTA CAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGACGGTGACCG CCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGTAGCGCCGCC GGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGCACACACACACAT CAGTAGCAGAAGTATGGCACGGGCGGGTAAAACCTTTATCGAGCTATTGCAAACCTGTCG GCAGAGTAGCTTTGTCGATTTTCGGCTGGAACGGTTGGAGCTGTCCGAGGGCGAGCGGGT GGGCGAGCGGCAGGCAGCAATAGTGCGCGTGAAGATTCACCGCAAAATAGCTCCATATAA GTGCGGTATCGTCTGTGCGGGGGAAGATGCTACAGTTGCTAACGTGCGGAATGACTTGAT TGACCTCTCGAAGCATCTAACCTACGTGCTGCGCGCCGCCAACCTTCCTGTCCACGAAAG CTTCTCCTTCGAAACAGTTCGCCGGCGCTGGATCGGCTGGATCAAATCGGCGTACCGTAC GTCCTGCTCCTAGGGGCCGGAACTGCGCACCGGCCTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9052#0      ------------------------------------------------------------
consensus_9052#2      -CAAAGCACGCATGGAGCAGTCACCTTAGTTTCCGATTCGAATCTCTGCCGTACGATACT 59
consensus_9052#1      GCGACGCGGCTATTCAAAAACGACCATCACA-CAACGCTGTCCCTTGGCAGGGGAAATCC 59
                                                                                  

consensus_9052#0      --GTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGG 58
consensus_9052#2      GAGTGGTCCAATTGATAATTAGAAGCGTAACCCAGCGCAGTTGAATGTTTGTCAGTACGG 119
consensus_9052#1      AGCTAGTCAAACAAACGAAAAGAAAAAAAATC------ATTCAAGTGTTAATTAATGTC- 112
                         * *** **   *  *  ****    ** *      * *  * ****  * * *    

consensus_9052#0      TTCGCGTTTGCGGCATGCTGCGTTGCTTTGTGGT-CGCGCGAAGGTTGTCACCGAGAAGC 117
consensus_9052#2      TTCGCGTTTGCGGCATGCTGCGTTGCTTTGTGGT-CGCGCGAAGGTTGTCACCGAGAAGC 178
consensus_9052#1      TTTTCACTAACTGTCCGCT---CAGCATGGAGGCATTTGTGAAGCAGATCGCCGGGGTGC 169
                      **  *  *  * *   ***     ** * * **     * ****    ** *** *  **

consensus_9052#0      TTCTCC-TCACTGCAGCCA-ACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTA 175
consensus_9052#2      TTCTCC-TCACTGCAGCCA-ACGCCCGAGTCGTCCGCTGTTACCGGTTCCGCCAACCGTA 236
consensus_9052#1      TACCCTGCCGGGACGGGTACGTGCGCCACTGTACCGCTACTACCGCAAGGGCGATCAGTT 229
                      * * *   *    * *  *   ** * * *   *****  *****     ** * * ** 

consensus_9052#0      CCTGGTCGGAG-CGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCA 234
consensus_9052#2      CCTGGTCGGAG-CGGCGCCTCGAGCATCGTACCAAGGTTCCGCAGCAAACGCACCGGTCA 295
consensus_9052#1      TCCGCCCGCCCTCTACATCTATGGCCAATCATCGA----CCGGGAAAGGTGCGATCTTGC 285
                       * *  **    *  *  **   **     * * *    ***    *   **     *  

consensus_9052#0      ACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTG 294
consensus_9052#2      ACCGAGCCGGCCGACGGCAATCAACAATCAGCGCCCGTCGTCATCAGCCACCAAACAGTG 355
consensus_9052#1      GCGAAGTGTTCCGGTGCCGGTCGGCCGCGGACG--AATCGCTGCGGTGCGCCCAGCTGAG 343
                       *  **    ***  * *  **  *      **    ***        * ** * * * *

consensus_9052#0      CGCCTGCTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTG 354
consensus_9052#2      CGCCTGCTCGAGCGGCTATCGCTCGTAGATTTGGACAGCCAGGAAGCCCTCGGCACGCTG 415
consensus_9052#1      CGC--GATC-AGCTGCTACACCAACAAGATACTGTTCG--AAACGATCGTCCGCCAGCTG 398
                      ***  * ** *** ****   *    ****   *   *  *      * ** **  ****

consensus_9052#0      CAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCG---GCACGGACGGCGTGGAA 411
consensus_9052#2      CAGGACTCGATTGAGTTTGCGTCGCGCATTCTGCCCATCG---GCACGGACGGCGTGGAA 472
consensus_9052#1      GAGGGCGCAGAGCTGTCGCAGTCCAACCACTACAGCATCGACTGCAAGCTCGAGTACGCA 458
                       *** * *      **    ***   *        *****   *** *  **     * *

consensus_9052#0      CCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGAC 471
consensus_9052#2      CCGCTCTACAGTGTGCTGGAGCGCGAGAAGCTTGCCCTCCGGCCCGATACAGTGGATGAC 532
consensus_9052#1      AAGGACTTCCTTGCCGCGCTGCGCCAGCGGCTCG--ATCCAGCCCGCTC--GTACGTGAT 514
                        *  ** *  **    *  **** **  *** *   *** ***** *   **   *** 

consensus_9052#0      GGTGAC-CGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGT 530
consensus_9052#2      GGTGAC-CGCCAGACGGAGGTGCTGCAGAACGCAACCATCACCGAGGAGGAGTACTTCGT 591
consensus_9052#1      CGTGGTGCGCCATGCGGAGCGGCTGCGCGACATGGCCCACAACCTGCTGCCACTGTTTCT 574
                       ***   *****  *****  *****   **    **  ** *  *  *      **  *

consensus_9052#0      AGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGC-AC 589
consensus_9052#2      AGCGCCGCCGGGCAACATTCCGCTCGAGCAGGGCGAACGAGCGTAAGTCTTCGTCGC-AC 650
consensus_9052#1      GCAGCTGCCGGA-AGCGACCGGGCTGAACGTGTCGGTGGTGCTGGTGTCGTCGCTGCCGT 633
                         ** *****  * *   * *   ** *  * **   * **    *** ***  **   

consensus_9052#0      ACACACACATCAGTAGCAGAAGTATGGCACGGGCGG--GTAAAACCTTTATCGAGCTATT 647
consensus_9052#2      ACACACACATCAGTAGCAGAAGTATGGCACGGGCGG--GTAAAACCTTTATCGAGCTATT 708
consensus_9052#1      TCGAAAAGTTCTACACCAAAGCGGGACTGCCGCCGGTGGTGAAGCTGTTCGTGGCGGAGT 693
                       *  * *  **   * ** *         * * ***  ** ** *  **   *    * *

consensus_9052#0      GCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGACGGAGCAACCGTGCGTGA 707
consensus_9052#2      GCAAACCTGTCGGCAGAGTAGCTTTGTCGATTTTCGGCTGGA----ACGGTTGGAGCTGT 764
consensus_9052#1      ACACTCGCGCCGACATGCAGCGCATTCTGATGAACGATTACGCGCCGCACGTGCAGGGAC 753
                       **  *  * ** **         *   ***   **  *        *    *       

consensus_9052#0      TCTATCGCTAACGTCGGTCGGTCAGCTGGTTGCGTAACAATT-TGCGCACGGCAAGGAAC 766
consensus_9052#2      CCGAGGGCGAGCG--GGTGGGCGAGC--GGCAGGCAGCAATAGTGCGCGTGAAGATTCAC 820
consensus_9052#1      TTGGCGGGCAACGGTCCGCCCCCGACCAGCTCTG-GCTAGCCGCGATCACGGAGGAGTTC 812
                            *  * **            *  *    *    *     *  *  *        *

consensus_9052#0      CAGCTGGGCAGCGGCAGTAGCAACAGCAACCCAATTCCAATGTACAGTGGAAGTAGCAAT 826
consensus_9052#2      C-GCAAAATAGCTCCAT--ATAAGTGCGGTATCGTCTGTGCG-GGGGAAGATGCTACAGT 876
consensus_9052#1      CATCGCAACTACGTTAGTCTGTTTCTCGGCACCTTCTGGAAG------GTGTGCCGCGAC 866
                      *  *       *   *          *       *      *          *   *   

consensus_9052#0      CG-TAGCGTACTGGAGAGCTTGGGCATGGTCCAGCGTGCTAACGGCAACAAGGTGCCGAA 885
consensus_9052#2      TGCTAACGTGCGGAATGACTTGA--TTGACCTCTCGAAGCATCTA-ACCTACGTGCTGCG 933
consensus_9052#1      -----GTGAAGGAGTTCGCCTGGTGGCGGCCGAATGTTTCCCCGCCTACTGTGAGCCG-G 920
                             *          * **     *  *    *      *     *   * ** *  

consensus_9052#0      -ACACCCGATCGGCTTGCTGGTGGAGGAAGCGCGCACGAACCAGCTGGTCAGCCTAGGCG 944
consensus_9052#2      CGCCGCCAACCTTCCTGTCCACGAAAGCTTCTCCTTCGAAACAGTTCGCC------GGCG 987
consensus_9052#1      TGCGGGACGGCACCATACCGGCGCACGATTCG---ATGAAGCTGTGGCGCAGC----ACG 973
                        *       *  * *      * * *   *      *** * *     *        **

consensus_9052#0      ATGGTTTTGCGCTGCAGCTGCCAGAAACTCTCGAGCTGCACACGACCTATTTGCTGCCGC 1004
consensus_9052#2      CTGGAT--------CGGCTGGATCAAATCGGCGTACCGTACGT--CCTGCTCCTAGGGGC 1037
consensus_9052#1      TAGGTTAGATGCTTCGAGAGGTCAATCAAGTCATTCCGCACGTTAGCAACT-GTCGGTGG 1032
                        ** *        *    *    *      *   * * **     *   *    *  * 

consensus_9052#0      CAGCAATGGGCAGCCAGTTCCTCTACCAGCTGCAGCGACAGCGCAAAATCTGGTGGATGC 1064
consensus_9052#2      CGGAACTGCGCACCGGCCTGC--------------------------------------- 1058
consensus_9052#1      AGGAGGAGAGAAAAGAGATAATTTAA-ATTTGAGACTACGTTACTTCTACGCAGTGCTGC 1091
                        *    * * *      *                                         

consensus_9052#0      GTTGGTCCGTCGATCCGGGCCGGTATTTCATCTCCGACATGAGGCGCGACGAAGCAGACC 1124
consensus_9052#2      ------------------------------------------------------------
consensus_9052#1      AAAATGTCACTGTCACTGTGTAATGTCAAAATGTCACTGTGTAATA-------------- 1137
                                                                                  

consensus_9052#0      AGGGGCCGGACGACGGCCGTATCGATCTGTGCCCGGGTTTCTGGACCGGTCCGAGCACGC 1184
consensus_9052#2      ------------------------------------------------------------
consensus_9052#1      ------------------------------------------------------------
                                                                                  

consensus_9052#0      GCAGATGGTCGAGCTGGG 1202
consensus_9052#2      ------------------
consensus_9052#1      ------------------
                                        




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)