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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9055#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 9 consensus length = 1419 fasta sequence
[CCGCGGACGCGTGGGTCGGCCGCGTCAGGGTGCACACACGAATAGTGACTCCGTCATCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAATT-CCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGCTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCCGGCGTGCGTCAGAAGGAGGGCGAAAGCCGA-CTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTAT-CCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACTCGTCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACACCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCCGAAATTAACCC-AAGCATCGGTA-CCGATGCCGATACAGAAAAGTGGGGTGATCTGCATCATCAAGTTGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTAGCTTCCCTAGCGTCTGCTATTTTGCGGAACACTTACAACGTCCATGCCGTTTCGACGCTGGTTAAGGGTGAGCACGGAATTGATGACGAAGTCTATCTATCGCTGCCATGCGTGCTGGGCCGTAACGGCGTTAGCCACGTGGTGAAGCAAATTCTTACGCCAGAAGAAACAAAGAAGCTGCAGG-ATCCGCCACCCTGATGGCGCAAGTTC-AGTCTGGAATCAAATTCTAAG-CACTTCTATTGCCATAGCTAAGGCTAAAAATGTTATTTAT-TGTC-AAAACCAAAACGTACGTTAAGCTAGCTACAAACA-AGCACAGAAGCATCTGGTCCCTTCTCTGTCCGGTGCCAGATCTTTA-AGCCCCCGCACCACGCGTTAGGAAATAATTCAATTGCACGATCCATAAATGTCCCTTTGCCTCCCAAGAACAAATGATATACAACAAATAAAATGATAGAAAT-ATTGCAGAGTGCATTTCATTCACTCAT]
[+] EMBL BM604244 [CCGCGGACGCGTGGGTCGGCCGCGTCAGGGTGCACACACGAATAGTGACTCCGTCATCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAACTCCTACGGTGAATTACACCTACGTTTAAATT CCCCTTTCTACAACACAGTTTTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGCTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGACTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCCGGCGTGCGTCAGAAGGAGGGCGAAAGCCGA CTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTAT CCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTACCCCAGAACCGTGTCATTGGTTCCGGCACCAACCTTG ]
[+] EMBL CNS094FO [ ataatGAATAGTGACTCCGTCATCGGTGGCAAATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAATT CCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCGTTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGCTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTACTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCCGGCGTGCGTCAGAAGGAGGGCGAAAG CGATCTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTAT CCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACTCGTCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACACCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCCGAAATTAACCC AAGCATCGGTA CCGATGCCGATACAGAAAAGTGGGGTGATCTGCATCATCAAGTTGTTAACAGCGCGTACG AGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTA CTTCCCTAGCGTCTGCTATTTTGCGGAACACTTACAACGTCCATGCCGTTTCGACGCTGGTTAAGGGT ]
[+] EMBL CNS09H1V [ CGTCATCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAATT CCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGCTCTGCCTTCATGAAGAACGCTCACGTCAGT CAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCCGGCGTGCGTTAGAAGGAGGGCGAAAGCCGA CTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTAT CCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACTCGTCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACACCAGCGTGCCAGTTTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCCGAAATTAACCC AAGCATCGGTA CCGATGCCGATACAGAAAAGTGGGGTGATCTGCATCATCAAGTTGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTA CTTCC ]
[+] EMBL BX626962 [ GTAGTTTCCNTCAGTTAGCAATTAAAACTCCTACGGTGAATTACACCTACGTTTAACTT CCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCCGGCGTGCGTCAGAAGGAGGGCGAAAGCCGA CTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTAT CCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTTGCATGGAAATTGAGTGGACTGCCCAAGAATCGTGTCATTGGTTCCGGCACCAACCTTGACTCGTCCCGCTTCCGCTTCCTGA ]
[+] EMBL BX602340 [ TAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAATTCCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGTCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGCTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCCGGCGTGCGTCAGAAGGAGGGCGAAAGCCGA CTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTAT CCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTG ]
[-] EMBL CNS094FP [ GAAAGCCGA CTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTATCCCCCAAGCTGGTCGCCCAAAGCCCGAACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACTCGTCCCGC TCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACACCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCCGAAATTAACCCAAAGCATCGGTA CCGATGCCGATACAGAAAAGTGGGGTGATCTGCATCATCAAGTTGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTAGCTTCCCTAGCGTCTGCTATTTTGCGGAACACTTACAACGTCCATGCCGTTTCGACGCTGGTTAAGGGTGAGCACGGAATTGATGACGAAGTCTATCTATCGCTGCCATGCGTGCTGGGCCGTAACGGCGTTAGCCACGTGGTGAAGCAAATTCTTACGCCAGAAGAAACAAAGAAGCTGCAGG ATCCGCCACCCTGATGGCGCAAGTTC AGTCTGGAATCAAATTCTAAG CACTTCTATTGCCATAGCTAAGGCTAAAAATGTTATTTAT TGTC AAAACCAAAACGTACGTTAAGCTAGCTACAAACA AGCACAGAAGCATCTGGTCCCTTCTCTGTCCGGTGCCAGATCTTTA AGCCCCCGCACCACGCGTTAGGAAATAATTCAATTGCACGATCCATAAATGTCCCTTTGCCTCCCAAGAACAAATGATATACAACAAATAAAATGATAGAAATAATTGCAGAGTGCATTTCATTCACTCAT]
[-] EMBL CNS09H1W [ AAAAACCGAACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGAACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTAACTCGTCCCG TTCCGCTTCCTGGTGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACACCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCCGAAATTAACCC AAGCATCGGTACCCGATGCCGATACAGAAAAGTGGGGTGATCTGCATCATCAAGTTGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTAGCTTCCCTAGCGTCTGCTATTTTGCGGAAAACTTACAACGTCCATGCCGTTTCGACGCTGGTTAAGGGTGAGCACGGAATTGATGACGAAGTCTATCTATCGCTGCCATGCGTGCTGGGCCGTAACGGCGTTAGCCACGTGGTGAAGCAAATTCTTACGCCAGAAGAAAAAAAGAAGCTGCAGGCATCCGCCACCCTGATGGCGCAAGTTC AGTCTGGAATCAAATTCTAAG CACTTCTATTGCCATAGCTAAGGCTAAAAATGTTATTTAT TGTC AAAACCAAAACGTACGTTAAGCTAGCTACAAACA AGCACAGAAGCATCTGGTCCCTTCTCTGTCCGGTGCCAGATCTTTA AGCCCCCGCACCACGCGTTAGGAAATAATTCAATTGCACGATCCATAAATGTCCCTTTGCCTCCCAAGAACAAATGATATACAACAAATAAAATGATAGAAAT ATTGCAGAGTGCATTT ]
[-] EMBL AGA281690 [ gCAGCGTGCCAGTGT GTCCGGTGTGAACGTGGCC GTGTTAGTTTGGCCGAAATTAACCC AAGCATCGGTA CCGATGCCGATACAGAAAAGT GGGTGATCTGCATCATCAAG TGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTAGCTTCCCTAGCGTCTGCTATTTTGCGGAACACTTACAACGTCCATGCCGTTTCGACGCT GTTAAGGGTGAGCACGGAATTGATGACGAAGTCTATCTATCGCTGCCATGCGTGCTGGGCCGTAACGGCGTTAGCCACGTGGTGAAGCAAATTCTTACGCCAGAAGAAACGAAGAAGCTGCAGGCATCCGCCACCCTGATGGCGCAAGTTCGAGTCTGGAATCAAATTCTAAGCCACTTCGATTGCCATAGCTTAGGCTAAAAATGTTATTTATGTGTCAAAAACCAAAACGTACGTTAAGCTAGCTACAAACAGAGCACTGAAGCATCTGGTCCCTTCTCTGTCCGGTGCCAGATCTTTAGAGCCCCCGCACCACGCGTTAGGAAATAATTCAATTGCACGATCCATAAATGTCCCTTTGCCTCCCAAGAACAAATGATATACAACAAATAAAATGATAGAAAT ATTGaaaaaaaaa ]
[-] EMBL AGA284170 [ TGATCTGCATCATCAAGTTGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCTATACATCCTGGGCTATTGGGCTTAGCGTAGCTTCCCTAGCGTCTGCTATTTTGCGGAACACTTACAACGTCCATGCCGTTTCGACGCTGGTTAAGGGTGAGCACGGAATTGATGACGAAGTCTATCTATCGCTGCCATGCGTGCTGGGCCGTAACGGCGTTAGCCACGTGGTGAAGCAAATTCTTACGCCAGAAGAAACGAAGAAGCTGCAGGCATCCGCCACCCTGATGGCGCAAGTTC AGTCTGGAATCAAATTCTAAG CACTTCGATTGCCATAGCTTAGGCTAAAAATGTTATTTAT TGTC AAAACCAAAACGTACGTTAAGCTAGCTACAAACA AGCACTGAAGCATCTGGTCCCTTCTCTGTCCGGTGCCAGATCTTTA AGCCCCCGCAaaaaaaa ]
consensusID : consensus_9055#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 700 fasta sequence
[CATCAGTTAGCAATTAAAGCTCCTACCGTGAATTACACCTACGTTTAAATTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACTTCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACAGCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCC]
[+] EMBL BX615422 [CATCAGTTAGCAATTAAAGCTCCTACCGTGAATTACACCTACGTTTAAATTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATATCCTTACCTACGTCGCATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACTTCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACGGTTGGATCATCGGCGAGCACGGTGACAGCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGGCCGGTGTTCGTTTGGCC]
[+] EMBL AGA285466 [ GACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCCGGACTGCAT ]
consensusID : consensus_9055#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence
[AAGAATCGGCCGAGGCTNNTAAGGTCAGTACAAATATTCCATCGTCGGCCGCGTCAGGGTGCACACACGAATAGTGACTCCGTCATCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAGATTCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCGTGGCGTCTCGTTTGATCGTNCAGTTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACGTAGACCTCGTCCAGCGTAATACCGAGCATCCTGAAGGGTATNATCCCCAAGCTGGTCGCCCAAAAGCCCCGGGACTGCAGTTCTGTTGGTCGTCTCCAAGCCCCGGTCGAGTATCCTTACCTACGGTACGCATGGA]
[+] EMBL BX468611 [AAGAATCGGCCGAGGCTNNTAAGGTCAGTACAAATATTCCATCGTCGGCCGCGTCAGGGTGCACACACGAATAGTGACTCCGTCATCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAGATTCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCGTGGCGTCTCGTTTGATCGTNCAGTTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACGTAGACCTCGTCCAGCGTAATACCGAGCATCCTGAAGGGTATNATCCCCAAGCTGGTCGCCCAAAAGCCCCGGGACTGCAGTTCTGTTGGTCGTCTCCAAGCCCCGGTCGAGTATCCTTACCTACGGTACGCATGGA]
consensusID : consensus_9055#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 563 fasta sequence
[CCGCCCACGCGTCCGGTTTAAAGTGAGTTGATTTGACCAGTGCAATATTTATCATTATGTGCCGTTTGTTCCGTTAATGTGTTAATTGTGTCCATCATTAGTTCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTTTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATAT]
[+] EMBL BM582455 [CCGCCCACGCGTCCGGTTTAAAGTGAGTTGATTTGACCAGTGCAATATTTATCATTATGTGCCGTTTGTTCCGTTAATGTGTTAATTGTGTCCATCATTAGTTCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTTTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCCGGACTGCATTCTGTTGGTCGTCTCCAACCCGGTCGATAT]
consensusID : consensus_9055#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 559 fasta sequence
[CCGCGGACGCGTGGGCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAAGTGAGTTGATTTGACCAGTGCAATATTTATCATTTGTGCCGTTTGTTCCGTTAATGTGTTAATTGTGTCCATCATTAGTTCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGT]
[+] EMBL BM626782 [CCGCGGACGCGTGGGCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTCCTACGGTGAATTACACCTACGTTTAAAGTGAGTTGATTTGACCAGTGCAATATTTATCATTTGTGCCGTTTGTTCCGTTAATGTGTTAATTGTGTCCATCATTAGTTCCCCTTTCTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCAGATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGTCGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCATTGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTTCATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCTGGCTCTCGTTTGATCGTCATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACTAGACCTCGTCCAGCGTAATACCGACATCCTGAAGGGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 CCGCGGACGCGTGGGCGGTGCTACATTCCGGTAGTTTCCATCAGTTAGCAATTAAAGCTC 60
consensus_9055#2 ----------AAGAATCGGCCGAGGCTNNTAAGGTCAGTACAAATATTCCATCGTCGGCC 50
consensus_9055#0 ----------------------------------------CCGCGGACGCGTGGGTCGGC 20
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------CCGCCCACGCGTCCGGTTTAAAGTGA--GTTGATTTGACCAGTGCAATATTTAT 52
consensus_9055#4 CTACGGTGAATTACACCTACG-TTTAAAGTGA--GTTGATTTGACCAGTGCAATATTTAT 117
consensus_9055#2 GCGTCAGGGTGCACACACGAATAGTGACTCCGTCATCGGTGCTAC-ATTCCGGTAGTTTC 109
consensus_9055#0 CGCGTCAGGGTGCACACACGAATAGTGACTCCGTCATCGGTGCTACATTCCGGTAGTTTC 80
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 CATTATGTGCCGTTTGTTCCGTTAATGTGTTAATTGTGTCCATCATTAG--TTCCCCTTT 110
consensus_9055#4 CATT-TGTGCCGTTTGTTCCGTTAATGTGTTAATTGTGTCCATCATTAG--TTCCCCTTT 174
consensus_9055#2 CATCAGTTAGCAATTAAAGCTCCTACG-GTGAATTACACCTACGTTTAAGATTCCCCTTT 168
consensus_9055#0 CATCAGTTAGCAATTAAAGCTCCTACG-GTGAATTACACCTACGTTTAA-ATTCCCCTTT 138
consensus_9055#1 CATCAGTTAGCAATTAAAGCTCCTACC-GTGAATTACACCTACGTTTAA-ATTC------ 52
*** * * ** * * ** **** * * *** ***
consensus_9055#3 CTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCA 170
consensus_9055#4 CTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCA 234
consensus_9055#2 CTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCA 228
consensus_9055#0 CTACAACACAGTTCTACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCA 198
consensus_9055#1 --------------TACAGTTCGTCAAAATGTCTGAAGTGAAAGCTAAGCTGCTTACCCA 98
**********************************************
consensus_9055#3 GATTGCCGAACCGATGACCTCGTTTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGT 230
consensus_9055#4 GATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGT 294
consensus_9055#2 GATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGT 288
consensus_9055#0 GATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGT 258
consensus_9055#1 GATTGCCGAACCGATGACCTCGTCTGGCAACAAGGTCACCGTTGTCGGTATTGGCCAAGT 158
*********************** ************************************
consensus_9055#3 CGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCAT 290
consensus_9055#4 CGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCAT 354
consensus_9055#2 CGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCAT 348
consensus_9055#0 CGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCAT 318
consensus_9055#1 CGGCATGGCCTGTGCATTCAGTATTCTAACCCAGAATGTGTCCAGTGAGGTTGCTCTCAT 218
************************************************************
consensus_9055#3 TGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTT 350
consensus_9055#4 TGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTT 414
consensus_9055#2 TGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTT 408
consensus_9055#0 TGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGCTCTGCCTT 378
consensus_9055#1 TGATGTCAACGCAGACAAACTGCAGGGTGAAATGATGGATCTGCAGCATGGTTCTGCCTT 278
*************************************************** ********
consensus_9055#3 CATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGC-TGGC-TCTCGT 408
consensus_9055#4 CATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGC-TGGC-TCTCGT 472
consensus_9055#2 CATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGCGTGGCGTCTCGT 468
consensus_9055#0 CATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGC-TGGC-TCTCGT 436
consensus_9055#1 CATGAAGAACGCTCACGTCAGTGCAGGCACCGATTTTTCTGTCTCTGC-TGGC-TCTCGT 336
************************************************ **** ******
consensus_9055#3 TTGATCGTC--ATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGAC-TAGACCTC 465
consensus_9055#4 TTGATCGTC--ATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGAC-TAGACCTC 529
consensus_9055#2 TTGATCGTNCAGTTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGACGTAGACCTC 528
consensus_9055#0 TTGATCGTC--ATTACGGCCGGCGTGCGTCAGAAGGAGGGCGAAAGCCGAC-TAGACCTC 493
consensus_9055#1 TTGATCGTC--ATTACGGCTGGCGTGCGTCAGAAGGAGGGCGAAAGCCGAC-TAGACCTC 393
******** ******* ******************************* ********
consensus_9055#3 GTCCAGCGTAATACCGA-CATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCC 524
consensus_9055#4 GTCCAGCGTAATACCGA-CATCCTGAAGGGT----------------------------- 559
consensus_9055#2 GTCCAGCGTAATACCGAGCATCCTGAAGGGTATNATCCCCAAGCTGGTCGCCCAAAAGCC 588
consensus_9055#0 GTCCAGCGTAATACCGA-CATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCC 552
consensus_9055#1 GTCCAGCGTAATACCGA-CATCCTGAAGGGTATTATCCCCAAGCTGGTCGCCCAAAGCCC 452
***************** *************
consensus_9055#3 ---GGACTGCA-TTCTGTTGGTCGTCTCCAA--CCCGGTCGATAT--------------- 563
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 CCGGGACTGCAGTTCTGTTGGTCGTCTCCAAGCCCCGGTCGAGTATCCTTACCTACGGTA 648
consensus_9055#0 ---GGACTGCA-TTCTGTTGGTCGTCTCCAA--CCCGGTCGATAT-CCTTACCTACGTCG 605
consensus_9055#1 ---GGACTGCA-TTCTGTTGGTCGTCTCCAA--CCCGGTCGATAT-CCTTACCTACGTCG 505
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 CGCATGGA---------------------------------------------------- 656
consensus_9055#0 CATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACT 665
consensus_9055#1 CATGGAAATTGAGTGGACTGCCCAAGAACCGTGTCATTGGTTCCGGCACCAACCTTGACT 565
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 CGTCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACG 725
consensus_9055#1 --TCCCGCTTCCGCTTCCTGATGTCGCAAAAGCTGGGCGTCGCTCCCACCTCGTGCCACG 623
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 GTTGGATCATCGGCGAGCACGGTGACACCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGG 785
consensus_9055#1 GTTGGATCATCGGCGAGCACGGTGACAGCAGCGTGCCAGTGTGGTCCGGTGTGAACGTGG 683
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 CCGGTGTTCGTTTGGCCGAAATTAACCCAAGCATCGGTACCGATGCCGATACAGAAAAGT 845
consensus_9055#1 CCGGTGTTCGTTTGGCC------------------------------------------- 700
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 GGGGTGATCTGCATCATCAAGTTGTTAACAGCGCGTACGAAGTCATTCGTCTGAAGGGCT 905
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 ATACATCCTGGGCTATTGGGCTTAGCGTAGCTTCCCTAGCGTCTGCTATTTTGCGGAACA 965
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 CTTACAACGTCCATGCCGTTTCGACGCTGGTTAAGGGTGAGCACGGAATTGATGACGAAG 1025
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 TCTATCTATCGCTGCCATGCGTGCTGGGCCGTAACGGCGTTAGCCACGTGGTGAAGCAAA 1085
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 TTCTTACGCCAGAAGAAACAAAGAAGCTGCAGGATCCGCCACCCTGATGGCGCAAGTTCA 1145
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 GTCTGGAATCAAATTCTAAGCACTTCTATTGCCATAGCTAAGGCTAAAAATGTTATTTAT 1205
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 TGTCAAAACCAAAACGTACGTTAAGCTAGCTACAAACAAGCACAGAAGCATCTGGTCCCT 1265
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 TCTCTGTCCGGTGCCAGATCTTTAAGCCCCCGCACCACGCGTTAGGAAATAATTCAATTG 1325
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ------------------------------------------------------------
consensus_9055#4 ------------------------------------------------------------
consensus_9055#2 ------------------------------------------------------------
consensus_9055#0 CACGATCCATAAATGTCCCTTTGCCTCCCAAGAACAAATGATATACAACAAATAAAATGA 1385
consensus_9055#1 ------------------------------------------------------------
consensus_9055#3 ----------------------------------
consensus_9055#4 ----------------------------------
consensus_9055#2 ----------------------------------
consensus_9055#0 TAGAAATATTGCAGAGTGCATTTCATTCACTCAT 1419
consensus_9055#1 ----------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||