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Anopheles gambiae
cluster # 9080 cluster # 9080       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9080#0 length = 1078 sequences # 13  
consensus_9080#1 length = 207 sequences # 1  

consensusID : consensus_9080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1078
fasta sequence
                              [AGTCTTTATTTTTCCCCAAGAAGGATGGTGTCCTGCCATGGCCTGCCTGTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTCCCTGCGCTGCACCT--ACAGCTCCTTCCAGCCGTATTTATTCTTGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCGTG-CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC-AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGACGGCTTCCGCCGCGATGATGGCATCCCGCAGGTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGTTCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTG-AAAAATGGGACTGATTTGC-GTC-ACTGCG--------TTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGTTTCAAGATTCACTGACGTGGCCAACGGCCGTACTTAGCGGTTGTCGTTC]

[-] EMBL BX611825             [AGTCTTTATTTTTCCCCAAGAAGGATGGTATCCTGCCATGGCCTGCCTGTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTTCCTGCGCTGCACCTTCACAGCTCCTTCCAGCCGTACTTATTCTTGTCCTTTCCCTTGTCCCGGGAGTCCTTGCCGTAATCCTTTGACCCTTTCGAGTCTGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTAAGATTTGCAGCCGAGCGTGAGCGTG CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATAGAGGCAGCGTTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCGGATATCGTGCGCCTTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTTATTTTCCTCCCCAAGGAGCCGCACCCGTCCGACT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CNS099P1             [            TCCCAAAGAAGGATGGTAACCTGCCATGGCCTGCCTGTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTTTCTGCGCTGCACCTTCACAGCTCCTTCCAGCCGTACTTATTCTTGTCCTTTCCCTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCATACTTTCCCTGCTCCTGTCTG   GGTGGTGGTGGTGGTGGTGATCCTTCCGTCTTTTCAGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTTAGTGTG CCGGTAAACAGCATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGAAATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAATACGGCTTCCGCCGCGATGATGGCATCCCGCAGTTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGT                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS09CZ9             [               CCAAGAAGGATGGTGTCCTGCCATGGCCTGCCTGTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTCCCTGCGCTGCACCT  ACAGCTCCTTCCAGCCGTATTTATTCTTGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCTGG CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGACGGCTTCCGCCGCGATGATGGCATCCCGCAGTTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGTTCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTG AAAAATGGGACTTATTTGC GTC ACTGCG        TTTGTCGTTAACGGTGGG                                                                                      ]
[+] EMBL CNS09941             [               CCAAGAAGGATGGTGT CTGCCATGGCCTGCCTGTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTCCCTGCGCTGCACCT  ACAGCTCCTTCCAGCCGTATTTATTCTTGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTTTAGGTACGATTTGCAGCCGAGCGTGA CTTGACCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGACATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGACGGCTTCCGCCGCGATGATGGCA                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09A91             [               CCAAGAAGGATGGTGT CTGCCATGGCCTGCCTGTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTCCCTGCGCTGCACCT  ACAGCTCCTTCCAGCCGTATTTATTCTTGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTAAGCtaaccgtt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS09D6F             [                         TGGTGTCCTGCCATGGCCTGCCTTTCTGCTCTACACGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTCCCTGCGCTGCACCT  ACAGCTCCTTCCAGCCGTATTTATTCTTGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGGGTCGGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGTGGC CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS09CZ8             [                                                                                                  CACAGTACAGTAAATTATGTTCTTTTCCATCTGTAGTTCTCCCTGCGCTGCACCT  ACAGCTCCTTCCAGCCGTATTTATTCTTGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCATACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCGGTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCGTG CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAA ACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGAC GCTTCCGCCGCGATGATGGCATCCCGCAGGTTCGCTATCATGTTCGAA CGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGTTCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTG AAAAATGGGACTGATTTGC GAC ACTGCG        TTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGTT                                                ]
[-] EMBL CNS09940             [                                                                                                                                                                                                                                                                                                                           GCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCGTG CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCCAAAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAAC CTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGAC GCTTCCGCCGCGATGATGGCATCCCGCAGGTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGTTCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTG AAAAATGGGACTGATTTGCAGTCTACTGCG        TTTGTCGTTAA                                                                                             ]
[-] EMBL CNS097AC             [                                                                                                                                                                                                                                                                                                                                 TTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCGTG CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAA ACTGGGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACG                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CNS099P0             [                                                                                                                                                                                                                                                                                                                                                                      AGTGTG CCGGTAAACAGCATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAA ACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAATAC GCTTCCGCCGCGATGATGGCATCCCGCAGGTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGTTCTTAGGTTGTTGGAGAACTTCCAGTATCGTCGTCGGTCTTGGCTGAAAAAATGGGACTGATTTGC GTT ACTGCG        TTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCGGTTCCGTTTCAAGATTCACTGACGTGGCCAACGGCCGTACTTAGCGGTTGTCGTTC]
[+] EMBL CNS097AD             [                                                                                                                                                                                                                                                                                                                                                                             CCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCACGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCC AAATCGCACAGCTCCTTATCGCTGTTGCACGTGTCGTAGCAGAAATCGTGCGCATTGCAGCACTGCTCCATCTCGACGGCCGGCAGAAATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTAATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACAGGGAGCACATTCTTCATCACGTCCCCGAAGACGGtt                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL BX615885             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTACAGCACTGCTCCATCTCGACGGCCGGCAGATATTCCGTGCTTATTTTCATCCCCAACGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGACGGCTTCCGCCGCGATGATGGCATCCCGCAGGTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGAGGGCTTTGCTTCCGTTCTTAGGTAG CCTCCAACTTCCAGTATCGTCGTCGGTCTTGGCTGAAAAAATGGGACTGATTTGC GTC ACTGCGTTTGTCGTTTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGTTTCAAGA TCACTGACGTGGCCAACGGCCGTACTTAGCGGT        ]
[-] EMBL CNS09D6E             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TAATTTTCATCCCCAGCGAGCCGCACCCGTCCGACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACACAGTTTTCCTCCACCGCCGCATCAAAAACTTCGTGCACGACTTTGAACTTTTTCGCCACATGGAGCACATTCTTCATCACGTCCCCGAAGGAGG TTCCGCCGCGGTGATGGCATCCCGCAGGTTCGCTATCATGTTCGAA CGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAATAGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGTTCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTG AAAAATGGGACTGATTTGC GCC ACTGCG        TTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGT                                                 ]


>consensus_9080#0 AGTCTTTATTTTTCCCCAAGAAGGATGGTGTCCTGCCATGGCCTGCCTGTCTGCTCTACA CGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTC TTTTCCATCTGTAGTTCTCCCTGCGCTGCACCTACAGCTCCTTCCAGCCGTATTTATTCT TGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCAT ACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCG GTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCG TGCCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCA CGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCCAAATCGCACA GCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCA TCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCG ACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACAC AGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACAT GGAGCACATTCTTCATCACGTCCCCGAAGACGGCTTCCGCCGCGATGATGGCATCCCGCA GGTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAAT AGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGT TCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTGAAAAATGGGACTGA TTTGCGTCACTGCGTTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTT CCGTTCCGTTTCAAGATTCACTGACGTGGCCAACGGCCGTACTTAGCGGTTGTCGTTC



consensusID : consensus_9080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 207
fasta sequence
                              [AGCACCTTCTTCATCACGTCCCCGAAGACGGCTTCCGTTCTTAGGTAGCCTCCAACTTCCAGTATCGTCGTCGGTCTTGGCTGAAAAAATGGGACTGATTTGCGTCCCTGCGTTTGTCGTTTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGTTTCAAGATCACTGACGTGGCCCCCGGCCGTAC]

[-] EMBL BX618180             [AGCACCTTCTTCATCACGTCCCCGAAGACGGCTTCCGTTCTTAGGTAGCCTCCAACTTCCAGTATCGTCGTCGGTCTTGGCTGAAAAAATGGGACTGATTTGCGTCCCTGCGTTTGTCGTTTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGTTTCAAGATCACTGACGTGGCCCCCGGCCGTAC]


>consensus_9080#1 AGCACCTTCTTCATCACGTCCCCGAAGACGGCTTCCGTTCTTAGGTAGCCTCCAACTTCC AGTATCGTCGTCGGTCTTGGCTGAAAAAATGGGACTGATTTGCGTCCCTGCGTTTGTCGT TTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGCAGGTGTGTTCCGTTCCGTTTCAA GATCACTGACGTGGCCCCCGGCCGTAC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9080#0      AGTCTTTATTTTTCCCCAAGAAGGATGGTGTCCTGCCATGGCCTGCCTGTCTGCTCTACA 60
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      CGGGAAGTGTGTAGATACGAAAGCTTCACTATTCTAATCACAGTACAGTAAATTATGTTC 120
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      TTTTCCATCTGTAGTTCTCCCTGCGCTGCACCTACAGCTCCTTCCAGCCGTATTTATTCT 180
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      TGTCCTTTCCTTTGTCCCGGGAGTCCTTGCCGTAATCCTTCGATCCTTTCGAGTCGGCAT 240
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      ACTTTCCCTGCTCCTGTCTGGGCGGTGGTGGTGATGGCGGTGATCCTTCCGTCTTCTCCG 300
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      GTGGACAGTAACAGCACCGTTGCTGCGAGTCTAGGTACGATTTGCAGCCGAGCGTGAGCG 360
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      TGCCGGTAAACAACATCTTGGCGGCCGCTTTACAACCCTTCACTACGATATCGCCCACCA 420
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      CGTTCTTCTCGTAATCGTCGCAGTACCGATACAGGCAGCGCTTAAAATCCAAATCGCACA 480
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      GCTCCTTATCGCTGTTGCACGTGTCGTAGCAGATATCGTGCGCATTGCAGCACTGCTCCA 540
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      TCTCGACGGCCGGCAGATATTCCGTGCTAATTTTCATCCCCAGCGAGCCGCACCCGTCCG 600
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      ACTGGGGGACGTAGAATTTATTGCGCGTGGGTGTTATGTCGCCGGGACATTTGTACACAC 660
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      AGTTTTCCTCCACCGCCGCATCAAACACTTCGTGCACGACTTTGAACTTTTTCGCCACAT 720
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      GGAGCACATTCTTCATCACGTCCCCGAAGACGGCTTCCGCCGCGATGATGGCATCCCGCA 780
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      GGTTCGCTATCATGTTCGAACCGTAGCCGGTGTACGCGTACGTCAGGAAGGTCAGCGAAT 840
consensus_9080#1      ------------------------------------------------------------
                                                                                  

consensus_9080#0      AGATCGCCACCTTCATGTAGGGGATTTGCATTTTGTCCGGCGGGTGGGCTTTGCTTCCGT 900
consensus_9080#1      --------------------AGCACCTTC--TTCATCACGTCCCCGAAGACGGCTTCCGT 38
                                           * *  * *  **  **  *     *      ********

consensus_9080#0      TCTTAGGTTGTTGGAGAACTTCCACTATCGTCGCCGGTCTTGGCTGAAAAA-TGGGACTG 959
consensus_9080#1      TCTTAGGTAGCCTCC-AACTTCCAGTATCGTCGTCGGTCTTGGCTGAAAAAATGGGACTG 97
                      ******** *      ******** ******** ***************** ********

consensus_9080#0      ATTTGCGTCACTGCGTTTGTCGTT--------AACGGTGGGTCGTTCTCCCTTCCGCCGC 1011
consensus_9080#1      ATTTGCGTCCCTGCGTTTGTCGTTTTGTCGTTAACGGTGGGTCGTTCTCCCTTCCGCCGC 157
                      ********* **************        ****************************

consensus_9080#0      AGGTGTGTTCCGTTCCGTTTCAAGATTCACTGACGTGGCCAACGGCCGTACTTAGCGGTT 1071
consensus_9080#1      AGGTGTGTTCCGTTCCGTTTCAAGAT-CACTGACGTGGCCCCCGGCCGTAC--------- 207
                      ************************** *************  *********         

consensus_9080#0      GTCGTTC 1078
consensus_9080#1      -------
                             




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)