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Anopheles gambiae
cluster # 9084 cluster # 9084       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9084#0 length = 2007 sequences # 12  
consensus_9084#1 length = 662 sequences # 1  
consensus_9084#2 length = 644 sequences # 1  

consensusID : consensus_9084#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 2007
fasta sequence
                              [GCATTTGGTGATGCAGCGGCTAATGAGGCCGCGCGAAAGCAAGGTGGTTATTCTGCGCAATATGGTCGGACCGGAGGACGTCGATGAGACGCTGCAGGAGGAGATTCAAGATGAGTGTAGCAAGTACGGTGCCGTGGACCGGGTTATTGTCTACAAGGAGCGCCAATCGGAGGGCAACTTTGCCGAGGACGACAACACCGACATGATCGTAAAGATCTTCGTCGAGTTCTCGCAGGCCACCGAAGCAGATAGAGCCCGTGAGTCACTGAACGGTCGCTACTTTGGCGGCCGCCTGGTCAAGGCGGAGTCTTACGATCAGGCTCTCTTTGACCACGGCGATCTGTCTGGCTAAATCGAGGGCGCGTGAGCACGTGTGTGTGTTTGGGGACGTGTGGGAAGCGCTCCGCATCCTACACTTTCTTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTATATGTGTGTGTTTGTGTGTGTGAAGTACTCTTACTCTCTCTCTCACACACACACACACCCTTAGATGGGCAGGAAGAATTGGATGGATCGAAAAAAAACACGATCGTTGGTAATGGTTCATAATTTGTTCACTTGGAAATGAAAATTGTGTCCAGTTCTTTGACCCTGCCCATCGCAAAGAGAAAACCCGCCAGTATCGATTGGCCAGAAAGATTGTACCGAACACAGTTGTTTGTTTATAAGCTCTCAAGCATCATATTACCACCAATGCTATCGGCCCACTCAACTTGAATCCCTTTTGAAATAGTAAATAATGCGTGGACGACGAACCCTTTTCACTGAACCAGCATTAATGTGGTTCATTTAGACTAAAAAAAGTAAGATTAAAAACCTAATAACACAACCATAAGATCACACCCAGGATTAATAGAAACCTACCTTTAAACTACACAACACGCACTTCATGCAACAAGCACCTTGATGGACTTTTGGAGTTTCGAAAAGAGGACAACTTTTGTTGCACTAGCAGTGTCCCCCGTGTGTGTTACTACGATGCAATCCATCAGACCAAGCTGTGCATACAACAGAGAGTGAATGGCATTACGATGCACACATACACCATTTCTCATTCATGTGTTAGACATAAACATAGGCATAAAGTCAAAATAATCCTGCATCGTAAAGGACGAGCTGTGTGTATTGAAGGCGCAATACCTAGGAATTCACACGGACCTAATTAAATCCACCATAAATTTCGAGCGTCGCTCAACGCTGCTCTTGCTCTAATATATTATAATTTAACTGTATATACAAACTCGGGAAGCGCGTAACGGCCATTTGTTCGTTTTGCTGCTTTTCCGGTGCTACATGATCAA-GGAAATATAGGACTAACGTCACC-AAAATC-ATTGACCCCGTGCGGTATATTTTTTTCTTCTCTTTTTGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTC-GTCGTACTGAGGGAACGAACCCA-TTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGA-CGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGGTGCGGTAGGCCAACAG]

[+] EMBL BX605226             [GCATTTGGTGATGCAGCGGCTAATGAGGCCGCGCGAAAGCAAGGTGGTTATTCTGCGCAATATGGTCGGACCGGAGGACGTCGATGAGACGCTGCAGGAGGAGATTCAAGATGAGTGTAGCAAGTACGGTGCCGTGGACCGGGTTATTATCTACAAGGAGCGCCAATCGGAGGGCAACTTTGCCGAGGACGACAACACCGACATGATCGTAAAGATCTTCGTCGAGTTCTCGCAGGCCACCGAAGCAGATAGAGCCCGTGAGTCACTGAACGGTCGCTACTTTGGCGGCCGCCTGGTCAAGGCGGAGTCTTACGATCAGGCTCTCTTTGACCACGGCGATCTGTCTGGCTAAATCGAGGGCGCGTGAGCACGTGTGTGTGTTTGGGGACGTGTGGGAAGCGCTCCGCATCCTACACTTTCTTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTATATGTGTGTGTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL BX616788             [                                                TATTCTGCGCAATATGGTCGGACCGTAGGACGTCGATGAGACGCTGCAGGAGGAGATTCAAGATGAGTGTAGCAAGTACGGTGCCGTGGACCGGGTTATTGTCTACAAGGAGCGCCAATCGGAGGGCAACTTTGCCGAGGACGACAACACCGACATGATCGTAAAGATCTTCGTCGAGTTCTCGCAGGCCACCGAAGCAGATAGAGCCCGTGAGTCACTGAACGGTCGCTACTTTGGCGGCCGCCTGGTCAAGGCGGAGTCTTACGATCAGGCTCTCTTTGACCACGGCGATCTGTCTGGCTAAATCGAGGGCGCGTGAGCACGTGTGTGTGTTTGGGGACGTGTGGGAAGCGCTCCGCATCCTACACTTTCTTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTATATGTGTGTGTTTGTGTGTGTGAAGTACTCTTACTCTCTCTCTCACACACACACACACCCTTAGATGGGCAGGAAGAATTGGATGGATCGAAAAAAAACACGATCGTTGGTAATGGTTCATAATTTGTTCACTTGGAAATGAAAATTGTGTCCAGTTCTTTGACCCTGCCCATCGCAAAGAGAAAACCCGCCAGTATCGATTAGCCAGAAAGATTGTACCGAACACAGTT TTTGTTTATAAGCTCTCAAGCATCATATTACCACCAATGCTATCGGCCCACTCAACTTGAATCCCTTTTTGAATAGTAAATAATGCGTGGACGACGAACCCTTTTCACTGAACCAGCATTAATGTGGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX615988             [                                                                                                                       GCAAGTACGGTGCCGTGGACCGGGTTATTGTCTACAAGGAGCGCCAATCGGAGGGCAACTTTGCCGAGGACGACAACACCGACATGATCGTAAAGATCTTCGTCGAGTTCTCGCAGGCCACCGAAGCAGATAGAGCCCGTGAGTCACTGAACGGTCGCTACTTTGGCGGCCGCCTGGTCAAGGCGGAGTCTTACGATCAGGCTCTCTTTGACCACGGCGATCTGTCTGGCTAAATCGAGGGCGCGTGAGCACGTGTGTGTGTTTGGGGACGTGTGGGAAGCGCTCCGCATCCTACACTTTCTTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTATATGTGTGTGTTTGTGTGTGTGAAGTACTCTTACTCTCTCTCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM630527             [                                                                                                                                                                                                                                                                                                                                                                                                                  ccgGCATCCTACACTTTCTTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTATATGTGTGTGTTTGTGTGTGTGAAGTACTCTTACTCTCTCTCTCACACACACACACACCCTTAGATGGGCAGGAAGAATTGGATGGATCGAAAAAAAACACGATCGTTGGTAATGGTTCATAATTTGTTCACTTGGAAATGAAAATTGTGTCCAGTTCTTTGACCCTGCCCATCGCAAAGAGAAAACCCGCCAGTATCGATTGGCCAGAAAGATTGTACCGAACACAGTTGTTTGTTTATAAGCTCTCAAGCATCATATTACCACCAATGCTATCGGCCCACTCAACTTGAATCCCTTTTGAAATAGTAAATAATGCGTGGACGACGAACCCTTTTCACTGAACCAGCATTAATGTGGTTCATTTAGACTAAAAAAAGTAAGATTAAAAACCTAATAACACAACCATAAGATCACACCCAGGATTAATAGAAACCTACCTTTAAACTACACAACACGCACTTCATGCAACAAGCACCTTGATGGACTTTTGGAGTTTCGAAAAGAGGACAACTTTTGTTGCACTAGCAGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX618757             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TCACTTGGAAATGAAAATTGTGTCCAGTTCTTTGACCCTGCCCATCGCAAAGAGAAAACCCGCCAGTATCGATTGGCCAGAAAGAAGGTACCGAACACAGTTGTTTGTTTATAAGCTCTCAAGCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL BM581895             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GCATCATATTACCACCAATGCTATCGGCCCACTCAACTTGAATCCCTTTTGAAATAGTAAATAATGCGTGGACGACGAACCCTTTTCACTGAACCAGCATTAATGTGGTTCATTTAGACTAAAAAAAGTAAGATTAAAACCCTAATAACACAACCATAAGATCACACCCAGGATTAATAGAAACCTACCTTTAAACTACACAACACGCACTTCATGCAACAAGCACCTTGATGGACTTTTGGAGTTTCGAAAAGAGGACAACTTTTGTTGCACTAGCAGTGTCCCCCGTGTGTGTTACTACGATGCAATCCATCAGACCAAGCTGTGCATACAACAGAGAGTGAATGGCATTACGATGCACACATACACCATTTCTCATTCATGTGTTAGACATAAACATAGGCATAAAGTCAAAATAATCCTGCATCGTAAAGGACGAGCTGTGTGTATTGAAGGCGCAATACCTAGGAATTCACACGGACCTAATTAAATCCACCATAAATTTCGAGCGTCGCTCAACGCTGCTCTTGCTCTAATATATTATAATTTAACTGTATATACAAACTCGGGAAGCGCGTAACGGCCATTTGTTCGTTTTGCTGCTTTTCCGGTGCTACATGATCAA GGAAATATAGGACTAACGTCACC A                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BM607845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CACAACATGCACTTCATGCAGCAAGCACCTTGATGGACTTTTGGAGTTTCGAAAAGAGGACAACTTTTGTTGCACTAGCAGTGTCCCCCGTGTGTGTTACTACGATGCAATCCATCAGACCAAGCTGTGCATACAACAGAGAGTGAATGGCATTACGATGCACACATACACCATTTTTCATTCATGTGTTAGACATAAACATAGGCATAAAGTCAAAATAATCCTGCATCGTAAAGGACGAGCTGTGTGTATTGAAGGCGCAATACCTAGGAATTCACACGGACCTAATTAAATCCACCATAAATTTCGAGCGTCGCTCAACGCTGCTCTTGCTTTAATATATTATAATTTAACTGTATATACAAACTCGGGAAGCGCGTAACGGCCATTTGTTCGTTTTGCTGCTTTTCCGGTGCTACATGATCAA GGAAATATAGGACTAACGTCACC AAAATC ATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL BX627924             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGAGCGTCGCTCAACGCTGCTCTTGCTCTAATATATTATAATTTAACTGTATATACAAACTCGGGAAGCGCGTAACGGCCATTTGTTCGTTTTGCTGCTTTTCCGGTGCTACATGATCAA GGAAATATAGGACTAACGTCACC AAAATC ATTGACCCCGTGCGGTATATTTTTTTCTTCTCTTTTTGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTC GTCGTACTGAGGGAACGAACCCA TTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGA CGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGT                                                                                    ]
[-] EMBL BM618136             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TGCTTTTCCGGTGCTACATGATCAA GGAAATATAGGACTAACGTCACC AAAATC ATTGACCCCGTGCGGTATATTTTTTTCTTTTCTTTTTGCCTTTCAAATGTCTTCCAACCAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTC GTCGTACTGAGGGAACGAACCCA TTCCCGTTTTATGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCAAGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGA C                                                                                                                                                                                                                                                                        ]
[-] EMBL BM608905             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     TTTTCCGGTGCTACATGATCAAGGGAAATATAGGACTAACGTCACCAAAAATCAATTGACCCCGTGCGGTATATTTTTTTCTTCTCTTTTTGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTCGGTCGTACTGAGGGAACGAACCCATTTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACCGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGGTGCGG           ]
[+] EMBL CNS08WSD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ttgtTAACGTCACC AAAAAC ATTGACCCCGTGCGGTATATTTTTTTCTTCTCTTTTTGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTC GTCGTACTGAGGGAACGAACCCA TTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTCCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGA CGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCCCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGGTCCAGTAGGCCAACAG]
[-] EMBL BX623007             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTC GTCGTACTGAGGGAACGAACCCA TTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGA CGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACa                  ]


>consensus_9084#0 GCATTTGGTGATGCAGCGGCTAATGAGGCCGCGCGAAAGCAAGGTGGTTATTCTGCGCAA TATGGTCGGACCGGAGGACGTCGATGAGACGCTGCAGGAGGAGATTCAAGATGAGTGTAG CAAGTACGGTGCCGTGGACCGGGTTATTGTCTACAAGGAGCGCCAATCGGAGGGCAACTT TGCCGAGGACGACAACACCGACATGATCGTAAAGATCTTCGTCGAGTTCTCGCAGGCCAC CGAAGCAGATAGAGCCCGTGAGTCACTGAACGGTCGCTACTTTGGCGGCCGCCTGGTCAA GGCGGAGTCTTACGATCAGGCTCTCTTTGACCACGGCGATCTGTCTGGCTAAATCGAGGG CGCGTGAGCACGTGTGTGTGTTTGGGGACGTGTGGGAAGCGCTCCGCATCCTACACTTTC TTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTA TATGTGTGTGTTTGTGTGTGTGAAGTACTCTTACTCTCTCTCTCACACACACACACACCC TTAGATGGGCAGGAAGAATTGGATGGATCGAAAAAAAACACGATCGTTGGTAATGGTTCA TAATTTGTTCACTTGGAAATGAAAATTGTGTCCAGTTCTTTGACCCTGCCCATCGCAAAG AGAAAACCCGCCAGTATCGATTGGCCAGAAAGATTGTACCGAACACAGTTGTTTGTTTAT AAGCTCTCAAGCATCATATTACCACCAATGCTATCGGCCCACTCAACTTGAATCCCTTTT GAAATAGTAAATAATGCGTGGACGACGAACCCTTTTCACTGAACCAGCATTAATGTGGTT CATTTAGACTAAAAAAAGTAAGATTAAAAACCTAATAACACAACCATAAGATCACACCCA GGATTAATAGAAACCTACCTTTAAACTACACAACACGCACTTCATGCAACAAGCACCTTG ATGGACTTTTGGAGTTTCGAAAAGAGGACAACTTTTGTTGCACTAGCAGTGTCCCCCGTG TGTGTTACTACGATGCAATCCATCAGACCAAGCTGTGCATACAACAGAGAGTGAATGGCA TTACGATGCACACATACACCATTTCTCATTCATGTGTTAGACATAAACATAGGCATAAAG TCAAAATAATCCTGCATCGTAAAGGACGAGCTGTGTGTATTGAAGGCGCAATACCTAGGA ATTCACACGGACCTAATTAAATCCACCATAAATTTCGAGCGTCGCTCAACGCTGCTCTTG CTCTAATATATTATAATTTAACTGTATATACAAACTCGGGAAGCGCGTAACGGCCATTTG TTCGTTTTGCTGCTTTTCCGGTGCTACATGATCAAGGAAATATAGGACTAACGTCACCAA AATCATTGACCCCGTGCGGTATATTTTTTTCTTCTCTTTTTGCCTTTCAAATGTCTTCCA AACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTCG TCGTACTGAGGGAACGAACCCATTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTT GGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCC AGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCT TCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGA GACGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAA TAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTG TCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATG AGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCAC TTGTGCACCGGTGCGGTAGGCCAACAG



consensusID : consensus_9084#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 662
fasta sequence
                              [ATGATCAAGGAAAATATAGGACTAACGTCCCCCAAAATCATTGACCCCCGTGCGGTATATTTTTTTCTTTTCCTTTTGGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTCGTCGTACTGAGGGAACGAACCCATTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTAGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGCCCACGCGTCCGCGG]

[-] EMBL BM587417             [ATGATCAAGGAAAATATAGGACTAACGTCCCCCAAAATCATTGACCCCCGTGCGGTATATTTTTTTCTTTTCCTTTTGGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTCGTCGTACTGAGGGAACGAACCCATTCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTAGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGCCCACGCGTCCGCGG]


>consensus_9084#1 ATGATCAAGGAAAATATAGGACTAACGTCCCCCAAAATCATTGACCCCCGTGCGGTATAT TTTTTTCTTTTCCTTTTGGCCTTTCAAATGTCTTCCAAACAGCAAAAGTTCGCTCTATTT TTCGTGCTTTCCTTTGCCAGGCATAACTTCGTACTCGTCGTACTGAGGGAACGAACCCAT TCCCGTTTTCTGCTGCTCCAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAG TTCGGCTGCATTGCGCTCTTTCATCTTCATAATGGCCAGATTTTTCAGCAGTTCCTGCTC CGTCGGCGGTTCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTG ATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGA TGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTAGCC CTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTT GCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAG AGTTTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGCCCACGCGTCCGC GG



consensusID : consensus_9084#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 644
fasta sequence
                              [GTGAAAAATAATAATGATGCGCACAAGATAAAATTGTTTTGTTGACTGTTTTTGATAGCTGTCAAATGTACCTTCAAAATGACATAGACAGTATATAAAGTTCGAGTTTTTCACCTTATTTGTTACTACGGACATCTAGCATCAAATTCCGGTTATTGAGTTGTACACCCAATAATAAATCGAGATTTAATCCCAAAATAATAAATATCCCGAATATCAAGAATTGCACGAATCGGCAAGTGATTAGAGCCCTAAGTGATATTCAACTTGTGGTCAGCAGTGTTTCCTACCTTCCGTAGGAAGCACAGGCCGATTCTTGGACCTTACCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCCTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGTCCGAGAGGGAATAGTTTACTATTATTATATAAACACGG]

[-] EMBL BM598849             [GTGAAAAATAATAATGATGCGCACAAGATAAAATTGTTTTGTTGACTGTTTTTGATAGCTGTCAAATGTACCTTCAAAATGACATAGACAGTATATAAAGTTCGAGTTTTTCACCTTATTTGTTACTACGGACATCTAGCATCAAATTCCGGTTATTGAGTTGTACACCCAATAATAAATCGAGATTTAATCCCAAAATAATAAATATCCCGAATATCAAGAATTGCACGAATCGGCAAGTGATTAGAGCCCTAAGTGATATTCAACTTGTGGTCAGCAGTGTTTCCTACCTTCCGTAGGAAGCACAGGCCGATTCTTGGACCTTACCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCCTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGTCCGAGAGGGAATAGTTTACTATTATTATATAAACACGG]


>consensus_9084#2 GTGAAAAATAATAATGATGCGCACAAGATAAAATTGTTTTGTTGACTGTTTTTGATAGCT GTCAAATGTACCTTCAAAATGACATAGACAGTATATAAAGTTCGAGTTTTTCACCTTATT TGTTACTACGGACATCTAGCATCAAATTCCGGTTATTGAGTTGTACACCCAATAATAAAT CGAGATTTAATCCCAAAATAATAAATATCCCGAATATCAAGAATTGCACGAATCGGCAAG TGATTAGAGCCCTAAGTGATATTCAACTTGTGGTCAGCAGTGTTTCCTACCTTCCGTAGG AAGCACAGGCCGATTCTTGGACCTTACCTTCTTCCACGTAGCCACGCTTCCCATTCGGCG GTAATCTCCTGATCGTACGCCTCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGC CGACCGACGGATGGATCAGCAGGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCA ACGTAGTTGCCCTTCATTTGGCGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATG CGCATTAGGTTGCGCGTTGGTGGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGT ACAAGTCCGAGAGGGAATAGTTTACTATTATTATATAAACACGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9084#0      GCATTTGGTGATGCAGCGGCTAATGAGGCCGCGCGAAAGCAAGGTGGTTATTCTGCGCAA 60
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TATGGTCGGACCGGAGGACGTCGATGAGACGCTGCAGGAGGAGATTCAAGATGAGTGTAG 120
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      CAAGTACGGTGCCGTGGACCGGGTTATTGTCTACAAGGAGCGCCAATCGGAGGGCAACTT 180
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TGCCGAGGACGACAACACCGACATGATCGTAAAGATCTTCGTCGAGTTCTCGCAGGCCAC 240
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      CGAAGCAGATAGAGCCCGTGAGTCACTGAACGGTCGCTACTTTGGCGGCCGCCTGGTCAA 300
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      GGCGGAGTCTTACGATCAGGCTCTCTTTGACCACGGCGATCTGTCTGGCTAAATCGAGGG 360
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      CGCGTGAGCACGTGTGTGTGTTTGGGGACGTGTGGGAAGCGCTCCGCATCCTACACTTTC 420
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TTACCTCTCGAGCAATGGTCCTAGCTGATCAATTTTCGACACAAACATTGGGAGCGCTTA 480
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TATGTGTGTGTTTGTGTGTGTGAAGTACTCTTACTCTCTCTCTCACACACACACACACCC 540
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TTAGATGGGCAGGAAGAATTGGATGGATCGAAAAAAAACACGATCGTTGGTAATGGTTCA 600
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TAATTTGTTCACTTGGAAATGAAAATTGTGTCCAGTTCTTTGACCCTGCCCATCGCAAAG 660
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      AGAAAACCCGCCAGTATCGATTGGCCAGAAAGATTGTACCGAACACAGTTGTTTGTTTAT 720
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      AAGCTCTCAAGCATCATATTACCACCAATGCTATCGGCCCACTCAACTTGAATCCCTTTT 780
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      GAAATAGTAAATAATGCGTGGACGACGAACCCTTTTCACTGAACCAGCATTAATGTGGTT 840
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      CATTTAGACTAAAAAAAGTAAGATTAAAAACCTAATAACACAACCATAAGATCACACCCA 900
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      GGATTAATAGAAACCTACCTTTAAACTACACAACACGCACTTCATGCAACAAGCACCTTG 960
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      ATGGACTTTTGGAGTTTCGAAAAGAGGACAACTTTTGTTGCACTAGCAGTGTCCCCCGTG 1020
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TGTGTTACTACGATGCAATCCATCAGACCAAGCTGTGCATACAACAGAGAGTGAATGGCA 1080
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TTACGATGCACACATACACCATTTCTCATTCATGTGTTAGACATAAACATAGGCATAAAG 1140
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TCAAAATAATCCTGCATCGTAAAGGACGAGCTGTGTGTATTGAAGGCGCAATACCTAGGA 1200
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      ATTCACACGGACCTAATTAAATCCACCATAAATTTCGAGCGTCGCTCAACGCTGCTCTTG 1260
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      CTCTAATATATTATAATTTAACTGTATATACAAACTCGGGAAGCGCGTAACGGCCATTTG 1320
consensus_9084#1      ------------------------------------------------------------
consensus_9084#2      ------------------------------------------------------------
                                                                                  

consensus_9084#0      TTCGTTTTGCTGCTTTTCCGGTGCTACATGATCAAGGAAA-TATAGGACTAACGTCACC- 1378
consensus_9084#1      ---------------------------ATGATCAAGGAAAATATAGGACTAACGTCCCCC 33
consensus_9084#2      -----------------------------------GTGAAAAATAATAATGATGCGCAC- 24
                                                         *  **  ***  * * * *    * 

consensus_9084#0      AAAATCATTGACCCC-GTGCGGTATATTTTTTTCTTCTCTTTTTG-CCTTTCAAATGTCT 1436
consensus_9084#1      AAAATCATTGACCCCCGTGCGGTATATTTTTTTCTTTTCCTTTTGGCCTTTCAAATGTCT 93
consensus_9084#2      AAGATAAAATTGTTTTGTTGACTGTTTTTGATAGCTGTCAAATGTACCTTCAAAATGACA 84
                      ** ** *         **    * * ***  *   * **   *   ****  ***** * 

consensus_9084#0      TCCAAACAGCA---AAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAG-GCATAACTT 1492
consensus_9084#1      TCCAAACAGCA---AAAGTTCGCTCTATTTTTCGTGCTTTCCTTTGCCAG-GCATAACTT 149
consensus_9084#2      T--AGACAGTATATAAAGTTCGAGTTTTTCACCTTATTTGTTACTACGGACATCTAGCAT 142
                      *  * **** *   ********   * **   * *  **     * *       ** * *

consensus_9084#0      CGTACTCGTCGTACTGAG-----------GGAACGAACCCATTCCCGTTTTCTGCTGCTC 1541
consensus_9084#1      CGTACTCGTCGTACTGAG-----------GGAACGAACCCATTCCCGTTTTCTGCTGCTC 198
consensus_9084#2      CAAATTCCGGTTATTGAGTTGTACACCCAATAATAAATCGAGATTTAATCCCAAAATAAT 202
                      *  * **    ** ****             **  ** * *       *  *        

consensus_9084#0      CAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTC 1601
consensus_9084#1      CAGTGCCGCCGCATCCTTTGGTTTGCTGTACTTGGCCTCCAGTTCGGCTGCATTGCGCTC 258
consensus_9084#2      AAATATC-CCGAATATCAAGAATTGCACGAATCGGCAAGTGATTAGAGCCCTAAGTGATA 261
                       * *  * *** **     *  ****   * * ***      ** *    *   * * * 

consensus_9084#0      TTTCATCT----TCA----TAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGT 1653
consensus_9084#1      TTTCATCT----TCA----TAATGGCCAGATTTTTCAGCAGTTCCTGCTCCGTCGGCGGT 310
consensus_9084#2      TTCAACTTGTGGTCAGCAGTGTTTCCTACCTTCCGTAGGAAGCACAGGCCGATTCTTGGA 321
                      **  *  *    ***    *  *  * *  **    ** *    * *  *  *    ** 

consensus_9084#0      TCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCC 1713
consensus_9084#1      TCCTTCCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCTTGATCGTACGCC 370
consensus_9084#2      CCTTACCTTCTTCCACGTAGCCACGCTTCCCATTCGGCGGTAATCTCCTGATCGTACGCC 381
                       * * ****************************************** ************

consensus_9084#0      TCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCA 1773
consensus_9084#1      TCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCA 430
consensus_9084#2      TCCTTGGCGGTAGGTTCGAACCACCGAGACGCACGGCGCCGACCGACGGATGGATCAGCA 441
                      ************************************************************

consensus_9084#0      GGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGG 1833
consensus_9084#1      GGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTAGCCCTTCATTTGG 490
consensus_9084#2      GGAATTTCATAATATTTGTTACCGAAATAATCCTCCCCAACGTAGTTGCCCTTCATTTGG 501
                      ********************************************** *************

consensus_9084#0      CGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGT 1893
consensus_9084#1      CGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGT 550
consensus_9084#2      CGCGGTCGAAACGATTTGAGAAAGTTGTCCAGCACGATGCGCATTAGGTTGCGCGTTGGT 561
                      ************************************************************

consensus_9084#0      GGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAG-------T 1946
consensus_9084#1      GGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGCCCGAGAG-------T 603
consensus_9084#2      GGACCGTTGGCCATCGTTGTTTGTATGAGTTGAACTAGTACAAGTCCGAGAGGGAATAGT 621
                      ******************************************** *******       *

consensus_9084#0      TTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGGTGCGGTAGGCCAACA 2006
consensus_9084#1      TTACTATTATTATATAAACAGTAGGTTCCAGCACTTGTGCACCGC--CCACGCGTCCGCG 661
consensus_9084#2      TTACTATTATTATATAAACACGG------------------------------------- 644
                      ********************                                        

consensus_9084#0      G 2007
consensus_9084#1      G 662
consensus_9084#2      -
                       




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)