These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9087#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1164 fasta sequence [CCCGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTG-AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC-GTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGCCGACT-GGTA-TAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGACACCCAAGCCGAAGCCTGCCAACAGGCCGTCGAAGGTTTCCCGCCGACGTCCGTCCAAGCGACCGAAGCAACCGGTTGATGATTCGGAACAGGCAGGCCCACATCCGTGTGACTCGTCCAGCTTTTAGTTTAGTCACATTGCATTGCCAACGGGCATGTTCTTTCTTGTTTGGGGAGGGCTAATAATTGTTAACTCCACCAAGCTGGAGTTGGATGAAGTAGAGCCAGGGGAAAAATACTCGCGTGTCTTTGTGTGTATGTATGT] [+] EMBL BM622766 [CCGGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTA ] [+] EMBL BM606100 [ CCGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGGCCGAAGGTGAAACGAAACCGAGGGAGCta ] [+] EMBL BM655081 [ ccGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTG AACGAAACCGAGGGAGCTACgc ] [+] EMBL BX622136 [ TGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGTCAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCTAAGGTG AACGAAACCGANGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCA ] [+] EMBL BX624497 [ GTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGT ] [+] EMBL BX622542 [ GTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAACCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCTAAGGTG AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC GTTCGACGATGTGGGCAAGCACTGCGAGT ] [+] EMBL BX615902 [ CACGGCCCAGACGCAGCTCCGAAGGCAGCATGAGCTAAACCGGCGAACACCGGGCAGGGGCCCCGCGGTACGCAACCGTGAGCCGGCCGCGTCCGACGCACCAGTCCGCAGCCCAGGGCGTCAGCAGGGCCCGGGACAGGCGTCCGCCTCGGACGAGATGGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGAAGCGGAGCAGTGCGAT ] [+] EMBL BM650393 [ ccgCACCGGGTAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACTAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAACAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGATTGTCAGTTCTTCTACGTGT ] [+] EMBL BM640375 [ ccgCCGACGCACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAACAGTGTGACAAGTACTACCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAAAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGATTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGCGGTTCGACGATGTGGCCAAGCACTGCGAATGGGCCCGAAAGGTGCCAGATTGTGCCGACTGGGTATTAAGGAT ] [+] EMBL BM649859 [ ccgCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGATTGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAACAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGG ] [+] EMBL BM628024 [ ccgCTTTGCAGATGCGGAACAGTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGGTATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGACTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGTCCCCGCCAGAACGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGTA AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGATTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC GTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGCCGACT GGTA TAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGACACCCAAGCCGAAGCCTGCCAACAGGCC ] [+] EMBL BX616120 [ TACTGCGTAGACGGTATGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCACCTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCTAAGGTT AACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTGTCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGGACAGGC GTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGCCGACT GGTA TAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGACACCCAAGCCGAAGCCTGCCAACAGCCCGTCGAAGGTTTCCCGCCGACGTCCGTCCAAGCGACCGAAGCAACCGGTTGATGATTCGGAACAGGCAGGCCCACATCCGTGTGACTCGTCCAGCTTTTAGTTTAGTCACATTGCATTGCCAACGGGCATGTTCTTTCTTGTTTGGGGAGGGCTAATAATTGTTAACTCCACCAAGCTGGAGTTGGATGAAGTAGAGCCAGGGGAAAAATACTCGCGTGTCTTTGTGTGTATGTATGT] [+] EMBL BX614859 [ TGTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGTATCTGCACCGGGCCGGACGAGGCCCAAAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTGCCCGAAGGGG AACGAAACCGAGGGAGCGACCCATCCACGCTAT ] consensusID : consensus_9087#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 187 fasta sequence [AAGTCCTACTACGGCGGGGACGGGATGCGCAACATGATCACCGGCCCGGAAGGGTGGGTGTGAAACCCACGCACCGGTATCTGCACCGGGCCGGACGAGGCCCAAAAGAAGGGCGGCTCGTCGGAGGACGTGTGCAAGTCAACCGGCCCGAAGGGGAACGAAACCGAGGGAGCGACCCATCCACGCT] [+] EMBL BX612118 [AAGTCCTACTACGGCGGGGACGGGATGCGCAACATGATCACCGGCCCGGAAGGGTGGGTGTGAAACCCACGCACCGGTATCTGCACCGGGCCGGACGAGGCCCAAAAGAAGGGCGGCTCGTCGGAGGACGTGTGCAAGTCAACCGGCCCGAAGGGGAACGAAACCGAGGGAGCGACCCATCCACGCT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9087#0 CCCGGCGACCGTCAAGATGAAAGCAGTGGCCAAGTTCAGTCTCAGTTTCCTAGTGCTCGT 60 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 CAGTGTGATCTTCGGACTCTCCACTGCCCAGACGCAGCTCCGAAGGCAGTATGAGCTAAA 120 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 CCGGCGAACACCGGGCAGTGGCCCCGCGGTACGCAACCGTGAGCCTGCCGCGTCCGACGC 180 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 ACCAGTCCGCAGCCCAGTGCGTCAGCAGGGCCCGGTACAGGCGTCCGCCTCGGACGAGAT 240 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 TGATCCGGAGCTGTCGGAGAACTGTCCCGAGCCGAACGGATACTTTGCAGATGCGGAGCA 300 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 GTGCGATAAGTACTATCAGTGCCGCGATGGACAGATTACGGAGAAACTGTGCCCGGACGG 360 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 TATGGTGTTCAACGATTACGACTCCGATCAGGAGAAGTGCGATCTGCCCTTCAACATTGA 420 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 CTGCAGCAAACGCCCAAAGCTCCAGACACCCATAGCGTCCCTGCACTGCCCCCGCCAGAA 480 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 CGGTTACTTTGCCAGCGAGACTGGTGCGTGCGATAAGTTCTACTACTGCGTGGACGGTAT 540 consensus_9087#1 ----------------------------------AAGTCCTACTACGGCGGGGACGGGAT 26 **** ******* *** ****** ** consensus_9087#0 GTTCAACATGATCACCTGCCCGGAAGGGTTGGTGTTTAATCCACGCACCGGCATCTGCAC 600 consensus_9087#1 GCGCAACATGATCACCGGCCCGGAAGGGTGGGTGTGAAACCCACGCACCGGTATCTGCAC 86 * ************* ************ ***** ** *********** ******** consensus_9087#0 CTGGCCGGACGAGGCCCAGAAGAAGGGCTGCTCGTCGGAGGACGTGTTCAAGTTTACCTG 660 consensus_9087#1 CGGGCCGGACGAGGCCCAAAAGAAGGGCGGCTCGTCGGAGGACGTGTGCAAGTCAACCGG 146 * **************** ********* ****************** ***** *** * consensus_9087#0 CCCGAAGGTGAACGAAACCGAGGGAGCGACCCATCCACGCTATGCCGATCCGGACGACTG 720 consensus_9087#1 CCCGAAGGGGAACGAAACCGAGGGAGCGACCCATCCACGCT------------------- 187 ******** ******************************** consensus_9087#0 TCAGTTCTTCTACGTGTGCATCAACGGTGAAACACCGCGCCGCAACGGGTGCAAACTCGG 780 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 ACAGGCGTTCGACGATGTGGCCAAGCACTGCGAGTGGGCCCGAAAGGTGCCAGATTGTGC 840 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 CGACTGGTATAAGGATCGTCTTACCGACAAGCAACTCGAGGAGCTGGAAAATCCACCGAC 900 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 ACCCAAGCCGAAGCCTGCCAACAGGCCGTCGAAGGTTTCCCGCCGACGTCCGTCCAAGCG 960 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 ACCGAAGCAACCGGTTGATGATTCGGAACAGGCAGGCCCACATCCGTGTGACTCGTCCAG 1020 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 CTTTTAGTTTAGTCACATTGCATTGCCAACGGGCATGTTCTTTCTTGTTTGGGGAGGGCT 1080 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 AATAATTGTTAACTCCACCAAGCTGGAGTTGGATGAAGTAGAGCCAGGGGAAAAATACTC 1140 consensus_9087#1 ------------------------------------------------------------ consensus_9087#0 GCGTGTCTTTGTGTGTATGTATGT 1164 consensus_9087#1 ------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||