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Anopheles gambiae
cluster # 9090 cluster # 9090       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9090#0 length = 1391 sequences # 3  
consensus_9090#1 length = 814 sequences # 6  
consensus_9090#2 length = 627 sequences # 5  

consensusID : consensus_9090#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1391
fasta sequence
                              [CCGCCCACGCGTCCGCAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACCAATCTCTCGCCTACGGCCACGTCCTTTTCGGTGCAATAAGGTTTGTGTGTCCTTGTATTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAGTCATCGCTCTAGCTAATGTGTATGCTACTATATGGTAATGTTTCCGAAAACACAATCCTGCTTGCTCCCGTCTAGAAGTTGCTCTTGTACTTCTTCACTTCGATCATTATCACATGAATATTAACCAGCTGTGCCCGCGCATTCGGTGTCAGCGGTTTGTAGAACTTGTGATAGTATTGCACGAGCTGGGCCAGCGCAAGCTGCAGCAGCTGCGACCCGGTCAACAGCGATGGGAATGATAGAAAAACCTCACGGTTAAGCTCCTCGAGCGACTTCTTCCAGTTGGCACTAAAGTTTGCCACCAGCTGTAACGAACGGCGCTCCTGGCGCTTCAGCTCCTCCGTCTGCTCCTTATCGCGCATCTGCTCACAGTCCTTCACGAACTGTATGATGCCGCCCAGATGAGGTGCTAGAATTTCCTCCACATACTCGGCACTCCGCGTGCTCAGCAATTCGCGGAACGCTTCCGCCTCCTTCGAGTTGTCTCGCGTGCGTTCCATCAGCACGCCGAGCACCAGATCGTAGTTGTTAATTAGATAAATCAGCTGTTCCTTGCGCGTGGTGAAAATGGCCGCCATACGCAGCATGAAACACTTTACCTCTTCCTGCAGTTCGAGCAGCATGTGGCTAACCAGCTCGTTCG]

[+] EMBL BM597746             [CCGCCCACGCGTCCGCAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACCAATCTCTCGCCTACGGCCACGTCCTTTTCGGTGCAATAAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL BM584516             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   CGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACCAATCTCTCGCCTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTGTATTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAGTCATCGCTCTAGCTAATGTGTATGCTACTATATGGTAATGTTTCCGAAAACACAATCCTGCTTGCTCCCGTCTAGAAGTTGCTCTTGTACTTCTTCACTTCGATCATTATCACATGAATATTAACCAGCTGTGCCCGCGCATTCGGTGTCAGCGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL BX612312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TCCCGTCTAGAAGTTGCTCTTGTACTTCTTCACTTCGATCATTATCACATGAATATTAACCAGCTGTGCCCGCGCATTCGGTGTCAGCAGTTTGTAGAACTTGTGATAGTATTGCACGAGCTGGGCCAGCGCAAGCTGCAGCAGCTGCGACCCGGTCAACAGCGATGGGAATGATAGAAAAACCTCACGGTTAAGCTCCTCGAGCGACTTCTTCCAGTTGGCACTAAAGTTTGCCACCAGCTGTAACGAACGGCGCTCCTGGCGCTTCAGCTCCTCCGTCTGCTCCTTATCGCGCATCTGCTCACAGTCCTTCACGAACTGTATGATGCCGCCCAGATGAGGTGCTAGAATTTCCTCCACATACTCGGCACTCCGCGTGCTCAGCAATTCGCGGAACGCTTCCGCCTCCTTCGAGTTGTCTCGCGTGCGTTCCATCAGCACGCCGAGCACCAGATCGTAGTTGTTAATTAGATAAATCAGCTGTTCCTTGCGCGTGGTGAAAATGGCCGCCATACGCAGCATGAAACACTTTACCTCTTCCTGCAGTTCGAGCAGCATGTGGCTAACCAGCTCGTTCG]


>consensus_9090#0 CCGCCCACGCGTCCGCAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAA GCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCGTTTCCCCTAGTGAAT GCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGA GGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTT CACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACC TGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAAT CGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCT GGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTG TGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAG AGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAA ATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACCAATCTCTCGCCTACGGCCACGTCC TTTTCGGTGCAATAAGGTTTGTGTGTCCTTGTATTTTTTTATTCCACCATACAACCAATA ATAAATAAAACAAAATGAAGTACGTAAGTCATCGCTCTAGCTAATGTGTATGCTACTATA TGGTAATGTTTCCGAAAACACAATCCTGCTTGCTCCCGTCTAGAAGTTGCTCTTGTACTT CTTCACTTCGATCATTATCACATGAATATTAACCAGCTGTGCCCGCGCATTCGGTGTCAG CGGTTTGTAGAACTTGTGATAGTATTGCACGAGCTGGGCCAGCGCAAGCTGCAGCAGCTG CGACCCGGTCAACAGCGATGGGAATGATAGAAAAACCTCACGGTTAAGCTCCTCGAGCGA CTTCTTCCAGTTGGCACTAAAGTTTGCCACCAGCTGTAACGAACGGCGCTCCTGGCGCTT CAGCTCCTCCGTCTGCTCCTTATCGCGCATCTGCTCACAGTCCTTCACGAACTGTATGAT GCCGCCCAGATGAGGTGCTAGAATTTCCTCCACATACTCGGCACTCCGCGTGCTCAGCAA TTCGCGGAACGCTTCCGCCTCCTTCGAGTTGTCTCGCGTGCGTTCCATCAGCACGCCGAG CACCAGATCGTAGTTGTTAATTAGATAAATCAGCTGTTCCTTGCGCGTGGTGAAAATGGC CGCCATACGCAGCATGAAACACTTTACCTCTTCCTGCAGTTCGAGCAGCATGTGGCTAAC CAGCTCGTTCG



consensusID : consensus_9090#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 814
fasta sequence
                              [CCGCGGACGCGTGGGTCC-CAGCAGTGTGTTGCGGTTGCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCG-TTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAG-TAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCGACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGACACAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACCAATCT-CTCGCCTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTGTA-TTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCCACCTGCCGG]

[+] EMBL BM616826             [CCGCGGACGCGTGGGTCC CAGCAGTGTGTTGCGGTTGCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCG TTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAG TAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGGCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGA                                                                                                                                                                                                                                                                                                                                                                                        ]
[-] EMBL CNS08U4E             [        ctGTTGGCCCACTGGAGTGTGTTGCGGTTGAACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCGTTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGATAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAG ACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCCCCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATAACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCTTCTGGTGTTTCTGCCTAAGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACAAATATACTTCCGTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTGTA TTTTTTTATTCCACCATACAACCAATAATAAATAAA                                                          ]
[+] EMBL BX628489             [                                 GGTTGCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCGAAAGTGTCTTCGCATCAATATCCCATTCCG TTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAG TAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTAGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCAGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCGACGCTGCTGCGATGGCGATCGCCCCAGCGCCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGACAGAGAGAGAGAGCGAGACGACCATGTT                                                                                                                                                                                                                                  ]
[+] EMBL BX624839             [                                   TTGCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCG TTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAG TAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACTGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGCTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCGACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAC    AGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCCGCTGCAGCGTGACCAATCT CTCGCCTTCGGNCACGTCCTTTT                                                                                                                            ]
[+] EMBL CNS08U4D             [                                     GCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCG TTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAG TAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAA GATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCAGCAGCGTGACCAATCT CTCGCCTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTGTA TTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAAAAAAAAAAAAAAAAAGGCCACATGTGCCCCACCTGCCGG]
[+] EMBL BX617115             [                                                                                                              CTTCGCATCAATATCCCATTCCG TTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAG TAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTAGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCAGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCGACGCTGCTGCGATGGCGATCGCCCCAGCGCCTGGACGGTTCCTAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGACAGAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTGACCAATCT CTCGACTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTGTATTTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAG                                               ]


>consensus_9090#1 CCGCGGACGCGTGGGTCCCAGCAGTGTGTTGCGGTTGCACAACAAAAGGAGTGTTCCCTG TGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAA TATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGT AGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAG CACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTG GTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGA AAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCC GTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCGACGCTGCTGCGATGGCGATC GCCCCAGCGGCTGGACGGTTCCCAGTGTGCCAACGCTGATCTGGTTGATATGTTGTTCCA GGATGAAGACTAGAGAGAGAGACACAGAGAGAGAGCGAGACGACCATGTTCGGGAATGTG TAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCGTG ACCAATCTCTCGCCTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTGTA TTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAAAAAAA AAAAAAAAAAGGCCACATGTGCCCCACCTGCCGG



consensusID : consensus_9090#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 627
fasta sequence
                              [AATCGCCACGAGGTGNCAGTGTGTTGCGGTTGCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCC--CGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGNTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTNCGGGAATGTGTAAAGTACAAGGAGTTTATTACGAAAATCAT]

[+] EMBL BX466122             [AATCGCCACGAGGTGNCAGTGTGTTGCGGTTGCACAACAAAAGGAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCC  CGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGGCTGGACGGTTCCCAGTGNTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTNCGGGAATGTGTAAAGTACAAGGAGTTTATTACGAAAATCAT]
[+] EMBL BM630251             [                      ccgGCGGTTGCACAACAAAAGCAGTGTTCCCTGTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCGAAAGTGTCTTCGCATCAATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGCTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCC  CGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCCAGCGG                                                                                                                                              ]
[+] EMBL CNS08ZHC             [                                                                          AAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCCCATTCCG TTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAA                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX617932             [                                                                                                                                                                                                           GAGTTCACGAAGCTAGCCGAAAGTGTGGAAAGCACGGGCGAACAGGTGCACATTCTGTGCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTCCGTACTGTGTGAAG                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS08ZHD             [                                                                                                                                                                                                                                                         TGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAGGCTGGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAGAGATCTGTACTGCCCGCGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATG                                                                                                                                                              ]


>consensus_9090#2 AATCGCCACGAGGTGNCAGTGTGTTGCGGTTGCACAACAAAAGGAGTGTTCCCTGTGTAT CCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCAATATCC CATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGGTAGTAA AGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAAGCACCG GCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCTGGTGTC CGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGGAAAAGA GCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCCCGTACC GTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGATCGCCCC AGCGGCTGGACGGTTCCCAGTGNTGCCAACGCTGATCTGGTTGATATGTTGTTCCAGGAT GAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTNCGGGAATGTGTAAA GTACAAGGAGTTTATTACGAAAATCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9090#1      CCGCGGACGCGTGGGTCCCAGCAGTGTGTTGCGGTTGCA-CAACAAAAGGAGTGTTCCCT 59
consensus_9090#2      -AATCGCCACGAGG----TGNCAGTGTGTTGCGGTTGCA-CAACAAAAGGAGTGTTCCCT 54
consensus_9090#0      ----------------------------CCGCCCACGCGTCCGCAAAAGGAGTGTTCCCT 32
                                                    **    **  *  *****************

consensus_9090#1      GTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCA 119
consensus_9090#2      GTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCA 114
consensus_9090#0      GTGTATCCTGCGATAGGGATAAATATAAGCTAAAAAGTGTTCAAAAGTGCCTTCGCATCA 92
                      ************************************************************

consensus_9090#1      ATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGG 179
consensus_9090#2      ATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGG 174
consensus_9090#0      ATATCCCATTCCGTTTCCCCTAGTGAATGCGTGCTAGTCTTGTGCGGTTTGCAAAGATGG 152
                      ************************************************************

consensus_9090#1      TAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAA 239
consensus_9090#2      TAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAA 234
consensus_9090#0      TAGTAAAGCATAAGGTGACCGGGTACGAGGAGTTCACGAAGCTGGCCGAAAGTTTGGAAA 212
                      ************************************************************

consensus_9090#1      GCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCT 299
consensus_9090#2      GCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCT 294
consensus_9090#0      GCACCGGCGAACCGGTGCACATTCTGTTCACCGGCAGCAAGGATGAGAACGGGGAAAGCT 272
                      ************************************************************

consensus_9090#1      GGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGG 359
consensus_9090#2      GGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGG 354
consensus_9090#0      GGTGTCCGTACTGTGTGAAGGCCGCACCTGTCGTCACGAAGGCGTTGGAATCTGCGCCGG 332
                      ************************************************************

consensus_9090#1      AAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCC 419
consensus_9090#2      AAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCC 414
consensus_9090#0      AAAAGAGCCACTTCATCACGGTAGAAATCGAGCGTCCATTCTGGAAAGATCTGAACTGCC 392
                      ************************************************************

consensus_9090#1      CGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCGACGCTGCTGCGATGGCGAT 479
consensus_9090#2      CGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGAT 474
consensus_9090#0      CGTACCGTAAGGATCCACGGACCCATCTGGTGTTTCTGCCTACGCTGCTGCGATGGCGAT 452
                      **************************************** *******************

consensus_9090#1      CGCCCCAGCGGCTGGACGGTTCCCAGTGT-GCCAACGCTGATCTGGTTGATATGTTGTTC 538
consensus_9090#2      CGCCCCAGCGGCTGGACGGTTCCCAGTGNTGCCAACGCTGATCTGGTTGATATGTTGTTC 534
consensus_9090#0      CGCCCCAGCGGCTGGACGGTTCCCAGTGT-GCCAACGCTGATCTGGTTGATATGTTGTTC 511
                      ****************************  ******************************

consensus_9090#1      CAGGATGAAGACTAGAGAGAGAGACACAGAGAGAGAGCGAGACGACCATGTTCGGGAATG 598
consensus_9090#2      CAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTNCGGGAATG 594
consensus_9090#0      CAGGATGAAGACTAGAGAGAGAGAGACAGAGAGAGAGCGAGACGACCATGTTCGGGAATG 571
                      ************************ ************************** ********

consensus_9090#1      TGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCG 658
consensus_9090#2      TGTAAAGT-ACAAGGAGTTTATTACGAAAATCAT-------------------------- 627
consensus_9090#0      TGTAAAGTTACAAGGAGTTTATTACGAAAATCATTTTTGAAACTCGTTGCTGCTGCAGCG 631
                      ******** *************************                          

consensus_9090#1      TGACCAATCTCTCGCCTACGGCCACGTCCTTTTCGGTGCAATAGGTTTTGTGTGTCCTTG 718
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      TGACCAATCTCTCGCCTACGGCCACGTCCTTTTCGGTGCAATAAGGTTTGTGTGTCCTTG 691
                                                                                  

consensus_9090#1      TATTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAAAAA 778
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      TATTTTTTTATTCCACCATACAACCAATAATAAATAAAACAAAATGAAGTACGTAAGTCA 751
                                                                                  

consensus_9090#1      -------AAAAAAAAAAAAGGCCAC-ATGTGCCCCACCTGCCGG---------------- 814
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      TCGCTCTAGCTAATGTGTATGCTACTATATGGTAATGTTTCCGAAAACACAATCCTGCTT 811
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      GCTCCCGTCTAGAAGTTGCTCTTGTACTTCTTCACTTCGATCATTATCACATGAATATTA 871
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      ACCAGCTGTGCCCGCGCATTCGGTGTCAGCGGTTTGTAGAACTTGTGATAGTATTGCACG 931
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      AGCTGGGCCAGCGCAAGCTGCAGCAGCTGCGACCCGGTCAACAGCGATGGGAATGATAGA 991
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      AAAACCTCACGGTTAAGCTCCTCGAGCGACTTCTTCCAGTTGGCACTAAAGTTTGCCACC 1051
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      AGCTGTAACGAACGGCGCTCCTGGCGCTTCAGCTCCTCCGTCTGCTCCTTATCGCGCATC 1111
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      TGCTCACAGTCCTTCACGAACTGTATGATGCCGCCCAGATGAGGTGCTAGAATTTCCTCC 1171
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      ACATACTCGGCACTCCGCGTGCTCAGCAATTCGCGGAACGCTTCCGCCTCCTTCGAGTTG 1231
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      TCTCGCGTGCGTTCCATCAGCACGCCGAGCACCAGATCGTAGTTGTTAATTAGATAAATC 1291
                                                                                  

consensus_9090#1      ------------------------------------------------------------
consensus_9090#2      ------------------------------------------------------------
consensus_9090#0      AGCTGTTCCTTGCGCGTGGTGAAAATGGCCGCCATACGCAGCATGAAACACTTTACCTCT 1351
                                                                                  

consensus_9090#1      ----------------------------------------
consensus_9090#2      ----------------------------------------
consensus_9090#0      TCCTGCAGTTCGAGCAGCATGTGGCTAACCAGCTCGTTCG 1391
                                                              




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)