These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9116#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 7 consensus length = 1488 fasta sequence [CCGCCCACGCGTCCGGGAGCCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG-AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG-GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT-GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA-GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTTTTCGTACC-CTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGCCGTGACAGGGACCGATGGAAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTTTTTTGTTTCTATAACTGTTGTGTGCTGTGCTGCAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAACTAATTACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTTACAACTTAACTAGTAATTATTAAATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG] [+] EMBL BM587460 [CCGCCCACGCGTCCGGGAGAAACAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCGAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCT ] [+] EMBL BM638848 [ CCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGGAAAGCATACACACGAAGAACATTGTGTCGATCTTG ] [+] EMBL BM587921 [ CCG AAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCG GTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGT ] [+] EMBL BX623773 [ CCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAG AAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGNGGTGCAGC ] [+] EMBL CNS08DLD [ CGTCCAATATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGTAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGTTTTTGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCAGCAGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGCGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGAGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCAAAAGCCAGCGGTTCCAGGGGGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCT ] [+] EMBL BX609102 [ GATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCTGAATGCG GTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGT GGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTTTTCGTACC CTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTG ] [-] EMBL CNS08DLE [ ACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGAGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCA GGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTTTTTTATGCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGAAAAAAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGCCGTGACAGGGACCGATGGAAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTTTTTTGTTTCTATAACTGTTGTGTGCTGTGCTGCAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAACTAATTACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTTACAACTTAACTAGTAATTATTAAATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG] consensusID : consensus_9116#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 970 fasta sequence [GAAAAAAAAACAAACCAGGCAAAGTGCACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGAAAAATCTGTACGACGGCCAGGTGCTGCAG-AAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAA-GCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGAAAGAGTATAGAGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAA-ATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAACAAAACGTT] [+] EMBL CNS098U7 [GAAAAAAAAACAAACCAGGCAAAGTGCACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGAAAAATCTGTACGACGGCCAGGTGCTGCAG AAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAA GCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGAAAGAGTATAGAGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAA ATCCATAACAATCGATGTTTGCTAACGTTTGCTGGTGAAACAAAACGTT] [-] EMBL CNS098U8 [ GAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAAAAGCGCATAAAGGAAGTGAAAGAAATCCAGGAGGGGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTCCCTCGCTGCAGATGCCAAAGGTGAAGGGGCTGCTGCAGGTGCTGATCAACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTACCGCTGCACGATTTCCCCCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGTGGCGTTCGCGTTCGAGCTGATGATGGACCAGGGCCTGAGACCGAAGGCAAGGCCGGAGGATATCGTTAATATGGATTTGAAGTCCACGCTCCGGGTGCTGTACACACTGTTCACGAAGTACCGCAACAATCCGTGAACGCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTACTCGACAGCTAATCCCAATGTGCCTTCCGTGTTTTGTTTATGTAACTGTTGCGTGCTGTGCTACAACACGTGTGGTACGAGTATAGAGAGTATTAACATAGGAAAACTAATTATATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTGTGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAATATCCATAACAATCGATGTTTGCTAA ] consensusID : consensus_9116#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 906 fasta sequence [CCGCCCACGCGTCCG-CCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTATTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGCTGGGTGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGGGGGGGTCGCGTTCGAGCTGATG] [+] EMBL BM649253 [CCGCCCACGCGTCCG CCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAAGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGT ] [+] EMBL BM628669 [ CCGACCCAGGCAAAGTGCAACCAAAACCCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGCCGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAAGGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAATGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCATTCAGCCTGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACTGGATCAACGACGAGCTGGTGGAGGAGCGAATCATCGTCACCAACATCGAGGAGGATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCAGCAGAAGGCCAGCGCCAGAAGCTATCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGGCCCGATC ] [+] EMBL CNS08IHU [ ccccGCTGTCCAACAACAAGCTGAACGTGCCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCCGTCGTGCTGAATGCGGTGAATCATACGCTCGGCTACCATCACAACACCCCAAAGTGGACGGTGGAAAGCATACACACGAAGAACATTGTATCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTACCGTGCCCCGATCCGGCTGCCCGACAACGTATTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCTGCTGGGTGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGATCAGATGACGCACAACGGGGGGGTCGCGTTCGAGCTGATG] consensusID : consensus_9116#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 861 fasta sequence [GCAGAATCCGAGGTTTAAAGTCACCAGCCAGCGGTTCCAGGAGCNGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGTCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTATCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACACGGACTTTAAGGACGGTGTGTATCTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCTCTCCGTACCGCTGCACGATTTCCACCTCACTGCCAAAGGACGCCGATCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGANGCTGATGATGGANACAGGGGCCTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGTCTACAACTATGGATTCTGAAAGTCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAGTACCGCCAACAATACCGTGAACCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATGCACGCGTATCTAGCGCCCGCNTACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGATAGACGCCCCTTATCCCCCGNGCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGTTACAACCCATGGGCTGACTGGTCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAACAACCAACCNCGTAGTCCNTGACGGATAAACCACGAACGGATCTTACATCCNAACGCAAGCGCTACATTATANAACAACCCACATATCAACGGACNACAACACACCTATANACAATCTAACATACGTATNCTAACNAACCCC] [+] EMBL AL692349 [GCAGAATCCGAGGTTTAAAGTCACCAGCCAGCGGTTCCAGGAGCNGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGTCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATCTCGTATCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACACGGACTTTAAGGACGGTGTGTATCTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCTCTCCGTACCGCTGCACGATTTCCACCTCACTGCCAAAGGACGCCGATCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGANGCTGATGATGGANACAGGGGCCTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGTCTACAACTATGGATTCTGAAAGTCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAGTACCGCCAACAATACCGTGAACCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATGCACGCGTATCTAGCGCCCGCNTACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGATAGACGCCCCTTATCCCCCGNGCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGTTACAACCCATGGGCTGACTGGTCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAACAACCAACCNCGTAGTCCNTGACGGATAAACCACGAACGGATCTTACATCCNAACGCAAGCGCTACATTATANAACAACCCACATATCAACGGACNACAACACACCTATANACAATCTAACATACGTATNCTAACNAACCCC] consensusID : consensus_9116#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 490 fasta sequence [GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACAACAAGCTGAACGTACCGGAAGGGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGGGCTGAATGCGGGGAAACATACGCTCGGTGACCATCACAACACCCCAAAGTGGACGGGGGAAAGCATACACACGAAGAACATGGTGTCGATCTTGCATTGGCTCGTGGCGCTGGGGCGCCATTACCGGGCCCCGATCCGGCGGCCCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCCAGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGGACGCGTCCGAAACGCTGTGCGACCATGCGCCGGACAAGCCGAAGGGGGGGCAGCGTCCGCGGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGAGGCGGCCGACCGGAACACGGACCTAAA] [+] EMBL BX610418 [GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACAACAAGCTGAACGTACCGGAAGGGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGGGCTGAATGCGGGGAAACATACGCTCGGTGACCATCACAACACCCCAAAGTGGACGGGGGAAAGCATACACACGAAGAACATGGTGTCGATCTTGCATTGGCTCGTGGCGCTGGGGCGCCATTACCGGGCCCCGATCCGGCGGCCCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCCAGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGGACGCGTCCGAAACGCTGTGCGACCATGCGCCGGACAAGCCGAAGGGGGGGCAGCGTCCGCGGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGAGGCGGCCGACCGGAACACGGACCTAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9116#0 CCGCCCACGCGTCCGGGAGCCGCAAAAAAACAACAAACCCAGGCAAAGTGCAACCAAAAC 60 consensus_9116#1 -----------------------GAAAAAAAAACAAACC-AGGCAAAGTGCA-CCAAAAC 35 consensus_9116#2 ----------------------CCGCCCACGCGTCCGCCCAGGCAAAGTGCAACCAAAAC 38 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC 120 consensus_9116#1 CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC 95 consensus_9116#2 CCTCGGAATGTCCACCCTAACGCGTCCAAAATCCCCCCGAACTCCCACTTCCGGGCGGGC 98 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA 180 consensus_9116#1 CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA 155 consensus_9116#2 CGATAAGGAGGAAAGCATCTGGGACAAAATTGGAACGCTGGGAAGGAAGAAGCGCATAAA 158 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 GGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAA 240 consensus_9116#1 GGAAGTGCAAGAAATCCAGGAGGAGGGTAAGATTGCGATCGACTCCCCCGGCAGCCCGAA 215 consensus_9116#2 GGAAGTGCAAGAAATCCAGGAGGAGGGCAAGATTGCGATCGACTCCCCCGGCAGCCCGAA 218 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 -------------------GCAGAATCCGAGGTTTAAAGTCAC-CAGCCAGCGGTTCCAG 40 consensus_9116#0 TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT 300 consensus_9116#1 TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT 275 consensus_9116#2 TGCACCGATCATCCCGCCGGAGGACTACAACCTGGAGGACAATGAATCTCGCTCGATCAT 278 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 -GAGCNGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAACCGGACGCGTTCGA 99 consensus_9116#0 TCAGCC-TGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACT 359 consensus_9116#1 TCAGCC-TGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACT 334 consensus_9116#2 TCAGCC-TGCCTCGCTGCAGATGCCAAAGGTGAAGGAGCTGCTGCAGGTGCTGATCGACT 337 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 TACGCTGTTCGACCATGTCGCCGGACAAGCTGAAGGTGGTGCAGCGTTCGCTGATC--TC 157 consensus_9116#0 GGATCAACGACGAGCTGGTGGAGGAGCGAATCATCG-------TCACCAACATCGAGGAG 412 consensus_9116#1 GGATCAACGACGAGCTGGTGGAGGAGCGAATCATCG-------TCACCAACATCGAGAAA 387 consensus_9116#2 GGATCAACGACGAGCTGGTGGAGGAGCGAATCATCG-------TCACCAACATCGAGGAA 390 consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 GTATCGTGAACAAGCACCTGAACAAGCTGAACTTCGAGTGCTGNGCCTGACCTGTAACAC 217 consensus_9116#0 GATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACA-ACAAGCT 471 consensus_9116#1 AATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACA-ACAAGCT 446 consensus_9116#2 GATCTGTACGACGGCCAGGTGCTGCAGAAGCTGTGGGAAAAGCTGTCCAACA-ACAAGCT 449 consensus_9116#4 -------------------GGCCGCAGAAGCTGGGGGAAAAGCTGGCCAACA-ACAAGCT 40 consensus_9116#3 GGACTTTAAGGACGGTGTGTATCTCTGTGTCTGCTGATGGGGCTGCTGGGTGGATTATCT 277 * * *** * **** * * ** consensus_9116#0 GAACGTACCGGAAGTGACCCAGTCGGCGGAAGGCCAGCGCCAGAAGCTGTCTGTCGTGCT 531 consensus_9116#1 GAACGTACCG-------------------------------------------------- 456 consensus_9116#2 GAACGTGCCG-------------------------------------------------- 459 consensus_9116#4 GAACGTACCG-------------------------------------------------- 50 consensus_9116#3 CTCCGTACCG-------------------------------------------------- 287 *** *** consensus_9116#0 GAATGCGGTGAATCATACGCTCGGTTACCATCACAACACCCCAAAGTGGACGGTGGAAAG 591 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 CATACACACGAAGAACATTGTGTCGATCTTGCATTTGCTCGTTGCGCTGGTGCGCCATTA 651 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 CCGTGCCCCGATCCGGCTGCCCGACAACGTGTTCGTGACGGTCGTGATGGTGCAGAAGCT 711 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 GAACGGAAAGCTCACCAGCCAGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGT 771 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 TGGCATGCGGTGCGAACCGGACGCGTTCGATACGCTGTTCGACCATGCGCCGGACAAGCT 831 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 GAAGGTGGTGCAGCGTTCGCTGATCTCGTTCGTGAACAAGCACCTGAACAAGCTGAACTT 891 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 CGAGGCGGCCGACCTGAACACGGACTTTAAGGACGGTGTGTTTCTGTGTCTGCTGATGGG 951 consensus_9116#1 ------------------------------------------------------------ consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 ------------------------------------------------------------ consensus_9116#0 GCTGCTGGGTGGATTTTTCGTACCCTGCACGATTTCCACCTCAC-GCCAAAGGACGCCGA 1010 consensus_9116#1 ------------------------CTGCACGATTTCCACCTCAC-GCCAAAGGACGCCGA 491 consensus_9116#2 ---------------------------GAAGTGACCCAGTCGGC-G--GAAGGCCAGCG- 488 consensus_9116#4 ---------------------------GAAGGGACCCAGTCGGC-G--GAAGGCCAGCG- 79 consensus_9116#3 ------------------------CTGCACGATTTCCACCTCACTGCCAAAGGACGCCGA 323 * * *** * * **** * ** consensus_9116#0 TCAGATGACGCACAAC---GTGGCGTTCGCGTT--CGAGCTGATGATGG---ACCAGGGC 1062 consensus_9116#1 TCAGATGACGCACAAC---GTGGCGTTCGCGTT--CGAGCTGATGATGG---ACCAGGGC 543 consensus_9116#2 CCAGAAGCTGTCCGTC---GTGCTGAATGCGGT--GAATCATACGCTCGGCTACCATCAC 543 consensus_9116#4 CCAGAAGCTGTCTGTC---GGGCTGAATGCGGG--GAAACATACGCTCGGTGACCATCAC 134 consensus_9116#3 TCAGATGACGCACAACTGTGTGCCGTTCGCGCTACGANGCTGATGATGGAN-ACAGGGGC 382 **** * * * * * * *** * * * * * ** * consensus_9116#0 CTGAG--ACCGAAGGCAAGGCCGGAGGATATCGTT--------AATATGGATTT--GAAG 1110 consensus_9116#1 CTGAG--ACCGAAG-CAAGGCCGGAGGATATCGTT--------AATATGGATTT--GAAG 590 consensus_9116#2 AACAC--CCCAAAGTGGACGGTGGAAAGCATACAC--------ACGAAGAACAT--TGTG 591 consensus_9116#4 AACAC--CCCAAAGTGGACGGGGGAAAGCATACAC--------ACGAAGAACAT--GGTG 182 consensus_9116#3 CTGAGGACCGAAGGCANAGGCCGGGCAGGACTATCGGTCTACAACTATGGATTCTGAAAG 442 * * * * * * ** * * * * * * consensus_9116#0 TCCACGCTCCGGGTGCTGTAC-ACACTGTT-CACGAAGTACCG--CAACAATCCGTGAAC 1166 consensus_9116#1 TCCACGCTCCGGGTGCTGTAC-ACACTGTT-CACGAAGTACCG--CAACAATCCGTGAAC 646 consensus_9116#2 TCGATCTTGCATTTGCTCGTT-GCGCTGGT-GCGCCATTACCGTGCCCCGATCCGGCTGC 649 consensus_9116#4 TCGATCTTGCATTGGCTCGTG-GCGCTGGG-GCGCCATTACCGGGCCCCGATCCGGCGGC 240 consensus_9116#3 TCCACGCTCCGGGTGCTGTACCACACTGTTTCACGAAGTACCGC-CAACAATACCGTGAA 501 ** * * * *** * *** * ***** * * ** * consensus_9116#0 GCGCCGTGACAGGGACCGATGGAAAGATGAAGCGTTTAGCGCCCGTTA--CTCGACAGCT 1224 consensus_9116#1 GCGACGTGGCGAGGACAGATCGCAAGATGAAGCGTTTAGCGCCCGTTA--CTCGACAGCT 704 consensus_9116#2 CCGACAACGTATTCGTGACGGTCGTGATGGTGCAGAAGCTGAACGGAAAGCTCACCAGCC 709 consensus_9116#4 CCGACAACGTTTTCGTGACGGTCGTGATGGTGCAGAAGCCGAACGGAAAGCTCACCAGCC 300 consensus_9116#3 CCGCNGCACGCTGGCNAGAGNACACGATCGCANACGATGCACGCGTATCTAGCGCCCGCN 561 ** *** ** * * ** consensus_9116#0 AATCCCAATGTGCCTTCCGTTTTTTGTT-TCTATAACTGTTG-TGTGCTGTGCTG-CAAC 1281 consensus_9116#1 AATCCCAATGTGCCTTCCGTGTTTTGTT-TATGTAACTGTTG-CGTGCTGTGCTA-CAAC 761 consensus_9116#2 AGCGGTTCCAGGAGCAGATTACCCAATCGTACGATGACGTTGGCATGCGGTGCGAGCCGG 769 consensus_9116#4 AGCGGTGCCAGGAGCAGAATACCCAATCGTACGAAGACGTTGGCAGGCGGGGCGAACCGG 360 consensus_9116#3 TACATTCCGAACAACGGCGTNAATTCCCCAAATAGGGGATAGACGCCCCTTATCCCCCGN 621 * * * * * consensus_9116#0 AC-GTGTGGTA-------CGAGTATAGAGAGTATTAACATAGGA-----AAACTAATTA- 1327 consensus_9116#1 AC-GTGTGGAA-------AGAGTATAGAGAGTATTAACATAGGA-----AAACTAATTAT 808 consensus_9116#2 AC-GCGTTCGA-------TACGCTGTTCGACCATGCGC-CGGAC-----AAGCTGCTGGG 815 consensus_9116#4 AC-GCGTCCGA-------AACGCTGTGCGACCATGCGC-CGGAC-----AAGCCGAAGGG 406 consensus_9116#3 GCAGGGTNTAACCATATCNGGGTACAACAACTATTGGGTTACAACCCATGGGCTGACTGG 681 * * ** * * * ** * consensus_9116#0 -------CCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGAAGAGAATATGTG 1380 consensus_9116#1 ATTTATACCCGATCAATGTCCCGACGAGAAGTGCTAAAAGAGAGAGGGAGAGAATATGTG 868 consensus_9116#2 TGGATTTTTCGTACCGCTGCACGATTTCCACCTCACGCCAAAGGACGCCGA--TCAGATG 873 consensus_9116#4 GGGGCAGCGTCCGC-GGAACCCGGCCGGGAACAAGCACCGGAACAAGCGGAACTCCGA-G 464 consensus_9116#3 TCGACGGCTAGCCNATGGATCTGACAGCTAAAACAAAACAACCAACCNCGTAGTCCNTGA 741 * * * * consensus_9116#0 TGTTTGTGCCTTCAGTCAGTGTTTTTT--TACAACTTAACTAGTAATTATTAAATCCATA 1438 consensus_9116#1 TGTTTGTGCCTTCAGTCAGTGTTTTTTATTACAACTTAACTAGTGATTATTAAATCCATA 928 consensus_9116#2 -------ACGCACAACGGGGGGGTCGCGTTCGAGCTGATG-------------------- 906 consensus_9116#4 -------GCGGCCGACCGGAACACGGACCTAAA--------------------------- 490 consensus_9116#3 CGGATAAACCACGAACGGATCTTACATCCNAACGCAAGCGCTACATTATANAACAACCCA 801 * consensus_9116#0 ACAATCGATGTTTGCTAACGTTTGCTGGTGAAATAAAACGTTAACGCGGG---------- 1488 consensus_9116#1 ACAATCGATGTTTGCTAACGTTTGCTGGTGAAACAAAACGTT------------------ 970 consensus_9116#2 ------------------------------------------------------------ consensus_9116#4 ------------------------------------------------------------ consensus_9116#3 CATATCAACGGACNACAACACACCTATANACAATCTAACATACGTATNCTAACNAACCCC 861 |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||