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Anopheles gambiae
cluster # 9123 cluster # 9123       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9123#0 length = 1086 sequences # 12  
consensus_9123#1 length = 648 sequences # 1  
consensus_9123#2 length = 558 sequences # 1  

consensusID : consensus_9123#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 12
consensus length = 1086
fasta sequence
                              [CCGCCCACGCGTCCGCGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCA-TTTTGCA----AAGCCCTGTTGGTGTGGCAGT-AAAACAGTAGCCCTGAAGCAG----T-TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC-GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC-GGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGAAGATCCCGAGGACGTTCCCGGATGCGAGGACTATTACGGTGACCAGGACATCAAGGCGCTCCAGAAGAAAGGATATTAATCGTAGTCACTAGTGTAAGCACAATTGAGTGTAAGTTATTTCCGCGAGCCGTGAACAATCTT]

[+] EMBL BM622407             [CCGCCCACGCGTCCGCGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCA TTTTGCA    AAGCCCTGTTGGTGTGGCAGT AAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTA                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AG50473              [        gtgcgaaCGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGA GACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGGTTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTTGCA    AAGCCCTGTTGGTGTGGCAGTAAAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX608393             [                        AGTTTTGCAAAGCGAACTGAACTTTGGCTAGTCTCCTGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCA TTTTGCA    AAGCCCTGTTGGTGTGGCAGT AAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCTAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGA                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM631198             [                      ccgGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCCTG  ACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGCAGAAAGATAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTGTTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCA TTTTGCAAAGCAAGCCCTGTTGGTGTGGCAGT AAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCTTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTT                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BM657630             [                                                                                                                                    ccgAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTTAACTCCTCCAGTGTTTCACGGAGTG  TTGGTTGGTGCGGTTTGTGACACGTCGTGGTGGTTGTTCTGTGTGCA TTTTGCAAAGTAAGCCCTGTTGGTGTGGCAGT AAAACAGTAGCCCTGAAGCGGAACTTGTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCCGGGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGGCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCCGGGAGATCTGC                                                                                                                                                                                                                                                  ]
[+] EMBL BX617042             [                                                                                                                                                                                     CTCCTCCTTTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGTTGGTTGTTCTGTGTGCA TTTTGCA    AAGCCCTGTTGGTGTGGCAGT AAAACATTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC GGAGGACTGCCGCAAGTACTACA                                                                                                                                                                                                                                     ]
[+] EMBL BX608179             [                                                                                                                                                                                                                                                                              CTGTTGGTGTGGCAGT AAAACAGTAGCCCTGAAGCAG    T TCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC GGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGG                                                                                                                                                            ]
[+] EMBL BX613393             [                                                                                                                                                                                                                                                                                                                              TCAGTGAAAATGAAGTATAGCATTTTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC GGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGAAGATCCCGAGGACGTTCCCGGATGCGAGGACTATTACGGTGACCAGGACATCAAGGCGCTCCAGAAGAAAGGATATTAATCGTAGTCACTAGTGTAAGCACAATTGAGTGTAAGTTATTTCCGCGAGCCGTGAACAATCTT]
[+] EMBL BM650022             [                                                                                                                                                                                                                                                                                                                                                ccgATAGTGTTCGTGGTTGCACTCTTTGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCTTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACAT                                                                                                                                                                                                                                                                     ]
[+] EMBL BM634006             [                                                                                                                                                                                                                                                                                                                                                                                    ccgGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGTTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC GGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGAAGATCCCGAAGACGTTCCCGGATGCGAGGACTATTACGGT                                                                                                     ]
[+] EMBL BX609459             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAACGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC GGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGAAGATCCCGAGGACGTTCCCGGATGCGAGGACTATTACGGTGACCAGGACATCAAGGCGCTCCAGAAGAAAGGATATTAATCGTAGTCACTAGTGTAAGCACAATTGAGTGTAAGTTATTTCCGCGAGCCGTGAACAA    ]
[+] EMBL BM652434             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ccgCCACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGGTGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCC GGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCC GGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGAAGATCCCGAGGACGTTCCCGGATGCGAGGACTATTACGGTGACCAGGACATCAAGGCGCTCCAGAAGAAAGGATATTAATCGTAGTCACTAGTGTAAGCACAATTGAGTGTAAGTTATTTCCGCGAGCCGTGAACA     ]


>consensus_9123#0 CCGCCCACGCGTCCGCGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCC TGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAA GTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGA ACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGT TGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGC AGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGC TGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTC CTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGG TCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCACAA CGTCGACTGTGGCGACCGCACCCAGCTAGAACCACCGATCTCCACTCCCCACTGCGAGCG TCTGTACGGTATCTTTGCGGATGCGGCCAAGTGCGATGTGTTCTGGAACTGCTGGAACGG TGAGGCCTCGCGCTACCAGTGCTCGCCCGGACTGGCCTACGATCGTGAGGCGCGCGTCTG CATGTGGGCCGACCAGGTGCCGGAATGCAAGAACGAAGAAGTAGCGAATGGATTCGCCTG CCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACATGCACACCCGGAGGA CTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTACGGCTGCCCGATCGG AACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGAAGATCCCGAGGACGT TCCCGGATGCGAGGACTATTACGGTGACCAGGACATCAAGGCGCTCCAGAAGAAAGGATA TTAATCGTAGTCACTAGTGTAAGCACAATTGAGTGTAAGTTATTTCCGCGAGCCGTGAAC AATCTT



consensusID : consensus_9123#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 648
fasta sequence
                              [AGAATCGGCCGAGGANATAAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCAGCAACGTCGACTGTGGCGACCGGACCCAGCTAGAACCACCGATCTCCGACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAACGTGCGATGTGTTCTGGGAACTGCATGGAACGGTGAGGCCTCGGCGCNTAGCAGTGCTCGCCCGGACATGGCTAGCGATTCGTCGAGGCGCGCGTCTGCANTGTGGNGGCGAGC]

[+] EMBL BX466344             [AGAATCGGCCGAGGANATAAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCGGTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGCAGTAAAACAGTAGCCCTGAAGCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGCAGCAACGTCGACTGTGGCGACCGGACCCAGCTAGAACCACCGATCTCCGACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAACGTGCGATGTGTTCTGGGAACTGCATGGAACGGTGAGGCCTCGGCGCNTAGCAGTGCTCGCCCGGACATGGCTAGCGATTCGTCGAGGCGCGCGTCTGCANTGTGGNGGCGAGC]


>consensus_9123#1 AGAATCGGCCGAGGANATAAAAGTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGG GACGAATTTGTGAACGAATTGAACTCCTCCAGTGTTTCACGGAGTGTATTGGTTGGTGCG GTTTGTGACACGGCGTGGTGGTTGTTCTGTGTGCATTTTGCAAAGCCCTGTTGGTGTGGC AGTAAAACAGTAGCCCTGAAGCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCG TGGTTGCACTCTTCGGAGCCGCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCG GCTTCTACCCGCATCACAGCTCCTGCGACAAGTACTGGAAGTGTGACAACAACGTGGCCG AGCTGAAGACCTGCGGCAACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCG AGAACTGTGACTACCTGCAGCAACGTCGACTGTGGCGACCGGACCCAGCTAGAACCACCG ATCTCCGACTCCCCACTGCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAACGTGCG ATGTGTTCTGGGAACTGCATGGAACGGTGAGGCCTCGGCGCNTAGCAGTGCTCGCCCGGA CATGGCTAGCGATTCGTCGAGGCGCGCGTCTGCANTGTGGNGGCGAGC



consensusID : consensus_9123#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 558
fasta sequence
                              [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGGATGCACTAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCATTGTAAGGCGATATAGGAGGTGCAGCATAGGTGGGAGGGCTTCCTCGTGGAGCTCGCCTCTGAGATGCGTGGACGCCGCGACCCCAACAAGCAGAAGAGACCGCGTTCCCGAACGCTCACCGCCGTGTACGATGCCATCCTGGAGGATCTGGTATTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCCCAGCTGATCAAGGTGCACCTGGATAAGAACCAGCAGACCACCATCGAACACAAAGTTGACACTTTCGCGTCGGTGTACAAGAAGCTGACTGGCCGTGACGTTACGTTCGAATTCCCAGAGAACTACCTGTAAAATATAAGGGTTGCGTGCTAGTGGATAGCCGAAGTTTGCAGCAGCTACAGCACTTGATTATTGGAGTGTTTGTGC]

[+] EMBL CNS0959W             [CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGGATGCACTAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCTGGCATTGTAAGGCGATATAGGAGGTGCAGCATAGGTGGGAGGGCTTCCTCGTGGAGCTCGCCTCTGAGATGCGTGGACGCCGCGACCCCAACAAGCAGAAGAGACCGCGTTCCCGAACGCTCACCGCCGTGTACGATGCCATCCTGGAGGATCTGGTATTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCCCAGCTGATCAAGGTGCACCTGGATAAGAACCAGCAGACCACCATCGAACACAAAGTTGACACTTTCGCGTCGGTGTACAAGAAGCTGACTGGCCGTGACGTTACGTTCGAATTCCCAGAGAACTACCTGTAAAATATAAGGGTTGCGTGCTAGTGGATAGCCGAAGTTTGCAGCAGCTACAGCACTTGATTATTGGAGTGTTTGTGC]


>consensus_9123#2 CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCTCTGTCCCTATCTAC TATCTAGCGAAACCACAGCCAAGGGAACGGGCTTGGATGCACTAGCGGGGAAAGAAGACC CTGTTGAGCTTGACTCTAGTCTGGCATTGTAAGGCGATATAGGAGGTGCAGCATAGGTGG GAGGGCTTCCTCGTGGAGCTCGCCTCTGAGATGCGTGGACGCCGCGACCCCAACAAGCAG AAGAGACCGCGTTCCCGAACGCTCACCGCCGTGTACGATGCCATCCTGGAGGATCTGGTA TTCCCGGCGGAGGTGGTCGGCAAGCGTATCCGCGTCAAGCTCGACGGATCCCAGCTGATC AAGGTGCACCTGGATAAGAACCAGCAGACCACCATCGAACACAAAGTTGACACTTTCGCG TCGGTGTACAAGAAGCTGACTGGCCGTGACGTTACGTTCGAATTCCCAGAGAACTACCTG TAAAATATAAGGGTTGCGTGCTAGTGGATAGCCGAAGTTTGCAGCAGCTACAGCACTTGA TTATTGGAGTGTTTGTGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9123#0      CCGCCCACGCGTCCGCGAACACAAAGTTTTGCAAAGCGAACTGAAGTTTGGCTAGTCTCC 60
consensus_9123#1      ------------------------------------------------------------
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      TGACACACACACACACCCGGGTGTTCAAATTCGTGGTGCAAGAAGACGTAGAAAGATAAA 120
consensus_9123#1      -------------------------------------AGAATCGGCCGAGGANATA-AAA 22
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      GTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGA 180
consensus_9123#1      GTGCCGGAGGACAACAGCAAACGGAACGACAAAAAAGGGACGAATTTGTGAACGAATTGA 82
consensus_9123#2      ---------------------CGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAG 39
                                           **  *    *  *  *   ** **   ** *  **    

consensus_9123#0      ACTCCTCCAGTGTTTCACGGAGTGTATTG-GTTGGTGCGGTTTGTGACACGGCGTGGTGG 239
consensus_9123#1      ACTCCTCCAGTGTTTCACGGAGTGTATTG-GTTGGTGCGGTTTGTGACACGGCGTGGTGG 141
consensus_9123#2      ATTCCCTCTGT-CCCTATCTACTATCTAGCGAAACCACAGCCAAGGGAACGGGCT--TGG 96
                      * ***  * **     *   * * * * * *      * *     *  ****  *  ***

consensus_9123#0      TTGTTCTGTGTGCATTTTGCAAAGCCCTGTTG-GTGTGGCAGTAAAACAGTAGCCCTGAA 298
consensus_9123#1      TTGTTCTGTGTGCATTTTGCAAAGCCCTGTTG-GTGTGGCAGTAAAACAGTAGCCCTGAA 200
consensus_9123#2      ATGCACTA-GCGGGGAAAG-AAGACCCTGTTGAGCTTGACTCTAGTCTGGCA-TTGTAAG 153
                       **  **  * *      * **  ******** *  ** *  **     * *    * * 

consensus_9123#0      GCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCC 358
consensus_9123#1      GCAGTTCAGTCAGTGAAAATGAAGTATAGCATAGTGTTCGTGGTTGCACTCTTCGGAGCC 260
consensus_9123#2      GCGATATAGGAGGTGCAGCATAGGTGGGAGGGCTTCCTCGTGGA-GCTCGCCTCTGAGAT 212
                      **  *  **   *** *    * **         *  ******  ** * * ** ***  

consensus_9123#0      GCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGC 418
consensus_9123#1      GCTGTCGCTCAGGAGAGCTTCAAGTGTCCGGACGATTTCGGCTTCTACCCGCATCACAGC 320
consensus_9123#2      GC-GTGGACGCCGCGA-CCCCAACAAGCAGAAGAGACCGCGTTCCCGAACGCTCACCGCC 270
                      ** ** *     * ** *  ***    * * *        * * *    ***    *  *

consensus_9123#0      TCCTGCGACAA-GTACTGGAAG-TGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCA 476
consensus_9123#1      TCCTGCGACAA-GTACTGGAAG-TGTGACAACAACGTGGCCGAGCTGAAGACCTGCGGCA 378
consensus_9123#2      GTGTACGATGCCATCCTGGAGGATCTGGTATT--CCCGGCGGAGGTG---GTCGGCA--A 323
                         * ***     * ***** * * **  *    *  *** *** **     * **   *

consensus_9123#0      ACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGC 536
consensus_9123#1      ACGGTCTCGCCTTCGACGCGACAGACTCCAAATACCTGACCGAGAACTGTGACTACCTGC 438
consensus_9123#2      GCGTATCCGCGTCAAGCTCGACGGATCCCAG----CTGATCAAG----GTG--CACCTGG 373
                       **    *** *    * **** **  ***     **** * **    ***   ***** 

consensus_9123#0      A-CAACGTCGACTG-TGGCGACCGCACCCAGCTAGAACCACCGATCTCC-ACTCCCCACT 593
consensus_9123#1      AGCAACGTCGACTG-TGGCGACCGGACCCAGCTAGAACCACCGATCTCCGACTCCCCACT 497
consensus_9123#2      ATAAGAACCAGCAGACCACCATCGAACACA----AAGTTGACACTTTC--GCGTCGGTGT 427
                      *  *    *  * *    * * ** ** **     *     *  * **   *  *    *

consensus_9123#0      GCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAA-GTGCGATGTGTTCTGG-AACTG 651
consensus_9123#1      GCGAGCGTCTGTACGGTATCTTTGCGGATGCGGCCAACGTGCGATGTGTTCTGGGAACTG 557
consensus_9123#2      ACAAGAAGCTGACTGG---CCGTGACGTTACGTTCGA--------ATTCCCAGAGAACTA 476
                       * **   ***   **   *  **  * * **  * *         *   * *  **** 

consensus_9123#0      C-TGGAACGGTGAGGCCTCG-CGCT-ACCAGTGCTCGCCCGGAC-TGGCCTACGAT-CGT 706
consensus_9123#1      CATGGAACGGTGAGGCCTCGGCGCNTAGCAGTGCTCGCCCGGACATGGCTAGCGATTCGT 617
consensus_9123#2      CCTGTAAAATATAAGGGTTG---CGTGCTAGTGGATAGCCGAA----GTTTGCAGC-AGC 528
                      * ** **     * *  * *   *     ****     *** *    *    *     * 

consensus_9123#0      -GAGGCGCGCGTCTGCATGTGGGCCGACCAGGTGCCGGAATGCAAGAACGAAGAAGTAGC 765
consensus_9123#1      CGAGGCGCGCGTCTGCAN-TGTGGNGGCGAGC---------------------------- 648
consensus_9123#2      TACAGCACTTGATTATTGGAGTGTTTGTGC------------------------------ 558
                          ** *  *  *      * *                                     

consensus_9123#0      GAATGGATTCGCCTGCCCGGCCGCCGGTGAGATCTCCAATGCTGGATCCTTCTCGCGACA 825
consensus_9123#1      ------------------------------------------------------------
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      TGCACACCCGGAGGACTGCCGCAAGTACTACATCTGTCTGGAGGGAGTCGCCCGCGAGTA 885
consensus_9123#1      ------------------------------------------------------------
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      CGGCTGCCCGATCGGAACCGTCTTCAAGATCGGCGATGCTGACGGCACTGGCAACTGCGA 945
consensus_9123#1      ------------------------------------------------------------
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      AGATCCCGAGGACGTTCCCGGATGCGAGGACTATTACGGTGACCAGGACATCAAGGCGCT 1005
consensus_9123#1      ------------------------------------------------------------
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      CCAGAAGAAAGGATATTAATCGTAGTCACTAGTGTAAGCACAATTGAGTGTAAGTTATTT 1065
consensus_9123#1      ------------------------------------------------------------
consensus_9123#2      ------------------------------------------------------------
                                                                                  

consensus_9123#0      CCGCGAGCCGTGAACAATCTT 1086
consensus_9123#1      ---------------------
consensus_9123#2      ---------------------
                                           




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)