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Anopheles gambiae
cluster # 9125 cluster # 9125       Sequences # 14       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9125#0 length = 1531 sequences # 13  
consensus_9125#1 length = 539 sequences # 1  

consensusID : consensus_9125#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 13
consensus length = 1531
fasta sequence
                              [GAGCATTTTCCGGCAGAAAATGCGTGGCAACAAAACGAAACCATTGCAAAAACTGTATAAGCCATCACGCAGGCGATCATCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATACAGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAACGATGATGATGGCAGGAGAACGAGACAGCTGTCCAGAAGACTGTCGTTGAACGATGCCGGCAAGCAGCGGTCGA-CCAGCGAAAGCAGCAGTGAAATACTACCACGGAAACGGGCGATCGCGCCCCGACCGAGACTTGACTCTTCCTCCGAACAGTCGGAAAAGCAAGCAGCCG-TCCCAGACGAAACCACCAGCAGCAAGGCACCGCGTAG-AAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCCACCAAGT-ACGCCACCG-TCGCTTGCCTC-GGAAACG-ACGTCGCAACAATCGGACGCCGGCAGTACCACCGGCGGCG-CGAGCGCCAGCGAAGATCTGAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGAT-GGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG-AACGCGTAGCGCGAC-GGATCCACCAAAGCGAAGCAG-AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA-CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC----C---GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG-CCATCGTTG-CCCCCATTGCATTT-CTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATGTTATTGTTCTAGCTTATCTATTCTAGTATTAG-TTTTTTTTCTCTGTACAACCGAAACATGTTTTGATGCGATTTGGTTTTTAATTGACCCTCTTTTCTGCATTAATTGCACATTGTACATTTTAACAAAAGCCCCATCGCTCTAATGACTT--GC----C-TGACTGACTGGCTTTAGCGTGTTACAAGTGAAATAAAACTATTTTTGAAAATATGCGCGCGCG]

[+] EMBL CNS08PYC             [GAGCATTTTCCGGCAGAAAATGCGTGGCAACAAAACGAAACCATTGCAAAAACTGTATAAGCCATCACGCAGGCGATCATCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATACAGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAACGATGATGATGGCAGGAGAACGAGACAGCTGTCCAGAAGACTGTCGTTGAACGATGCCGGCAAGCAGCGGTCGACCCAGCGAAAGCAGCAGTGAAATACTACCACGGAAACGGGCGATCGCGCCCCGACCGAGACTTGACTCTTCCTCCGAACAGTCGGAAAAGCAAGCAGCCG TCCCAGACGAAACCACCAGCAGCAAGGCACCGCGTAG AAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCCACCAAGT ACGCCACCG TCGCTTGCCTC GGAAACG ACGTCGCAACAATCGGACGCCGGCAGTACCACCGGCGGCG CGA CGCCAGCGAAGATCTGAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGATGGGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTAGCG AAC GGATCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CNS08S89             [              AGAAAATGCGTGGCAACAAAACGAAACCATTGCAAAAACTGTATAAGCCATCACGCAGGCGATCATCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATACAGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAACGATGATGATGGCAGGAGAACGAGACAGCTGTCCAGAAGACTGTCGTTGAACGATGCCGGCAAGCAGCGGTCGA CCAGCGAAAGCAGCAGTGAAATACTACCACGGAAACGGGCGATCGCGCCCCGACCGAGACTTGACTCTTCCTCCGAACAGTCGGAAAAGCAAGCAGCCGCTCCCAGACGAAACCACCAGCAGCAAGGCACCGCGTAG AAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCCACCAAGTCCCGCCACCG TCGCTTGCCTC GGAAACG ACGTCGCAACAATCGGACGCCGGCAGTACCACCGGCGGCGCCGAGCGCCAGCGAAGATCTGAAACA TTTACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGAT GGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGAACGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTAGCG AAC GGATCCACCAAAGCGAAGAGG AACGACCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08OOW             [                                                            GCCATCACGCAGGCGATCATCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATACAGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAACGATGATGATGGCAGGAGAACGAGACAGCTGTCCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM600675             [                                                                               TCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATACAGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAACGATGATGATGGCAGGAGAACGAGACAGCTGTCCAGAAGACTGTCGTTGAACGATGCCGGCAAGCAGCGGTCGA CCAGCGAAAGCAGCAGTGAAATACTACCACGGAAACGGGCGATCGCGCGCCGACCGAGACTTGACTCTTCCTCCGAACAGTCGGAAAAGCAAGCAGCCG TCCCAGACGAAACCACCAGCAGCAAGGCACCGCGTAGCAAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCCACCAAGT ACGCCACCG TCGCTTGCCTCGGGAAACG ACGTCGCAACAATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CNS08SAS             [                                                                                                                                                                                                                                                                                                                                                                                                                                      GCGGCACAGGCCGCGTATCATCAGCCCACCAAGT ACGCCACCGCTCGCTTGCCTC GGAAACGCACGTCGCAACAATCGGACGCCGGCAGTACCACCGGCGGCG CGAACGCCAGCGAAGATCTGAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCCTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGAT GGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGAGCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTGCCGC ACGGGATCCACCAAAGCGAA CAGCAACGACCACGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08PYD             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGAT GGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTAGCGCGAC GGATCCACCAAAGCGAAGCAG AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTGCCCCCCATTGCATTT TTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACA                                                                                                                                                                                                                                                                           ]
[+] EMBL BM584935             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      cCGCGCAAAACAACCCCGGCGAGCAGGAGCGAT GGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTAGCGCGAC GGATCCACCAAAGCGAAGCAG AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAAC                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08OOX             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GACCCTGGCAAGGCGGAAAGCGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTAGCGCGAC GGATCCACCAAAGCGAAGCAG AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTG CCCCCcatg                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CNS08S8A             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CGGCACCAAAAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACGAAACGCGTAGCGCGAC GGATGGGGCAAAGCGAAGCAG AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTGCCCCCCATTGCATTT CTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATGTTAGTGTTCTAGCTTAaa                                                                                                                                                                                                               ]
[-] EMBL CNS08SAT             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACG AACGCGTAGCGCGAC GGATCCACCAAAGCGAAGCAG AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCAAACTGCAGGCGCCAGGCGGGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATAGCTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTGCCCATCGTTG CCCCCATTGCATTTGCTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATG                                                                                                                                                                                                                                 ]
[+] EMBL BX622447             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCAATAGCGGTCAAACG AACGCGTAGCGCGAC GGATCCACCAAAGCGAAGCAG AACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTG CCCCCATTGCATTT CTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATGTTATTGTTCTAGCTTATCTATTCTAGTATTAG TTTTTTTTCTCTGTACAACCGAAACATGTTTTGATGCGATTTGGTTTTTAATTGACCCTCTTTTCTGCATTAATT                                                                                                                     ]
[+] EMBL BX616173             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ACGACCACGGAGGACACCGATGGCAAACAGCTGAACGACAGCAACGGCACACTGCAGGGGCCAACAACGAGTAAAGCGACCGCCGCAAACAAAGCAAAGAAGGACAAGGCACAGAACAATATA CTGAACTATTTTAATCGCTGCTGAGTTGAATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGCATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTCGGAGCAAAGGAGGGAGAGCGGTGTTTAGGAAGAAATGTTGGCCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTG CCCCCATTGCATTT C TTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACATTTACCTACTGTATAACCTTGTGTACTGGATAGTGAATAATGTTATTGTTCTAGCTTATCTATTCTAGTATTAGTTTTTTTTTCTCTGTACAACCGAAACATGTTTTGATGCGATTTGGTTTTTAATTGACCCTCTTTTCTGCATTAATTGCACATTGTACATTTTAACAAAAGCCCCATCGCTCTAATGACTTCAGCGTGTCTTGACTGACTGGCTTTAGCGTGTTACAAGTGAAATAAAACTATTTTTGAAAATATGCGCGCGCG]
[+] EMBL BM584928             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ccgACAGTTTTATCTTAGCTAATGAACGATACTGATTC    C   GGAGGGAGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTG CCCCCATTGCATTT CTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGGCATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATGTTATTGTTCTAGCTTATCTATTCTAGTATTAG TTTTTTTTCTCTGTACAACCGAAACATGTTTTGATGCGATTTGGTTTTTAATTGACCCTCTTTTCTGCATTAATTGCACATTGTACATTTTAACAAAAGCCCCATCGCTCCAATGACTT  GC    C GGACCGGCCGGCTTTAGCGTGTTACAAGTGAA                               ]


>consensus_9125#0 GAGCATTTTCCGGCAGAAAATGCGTGGCAACAAAACGAAACCATTGCAAAAACTGTATAA GCCATCACGCAGGCGATCATCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATAC AGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAA CGATGATGATGGCAGGAGAACGAGACAGCTGTCCAGAAGACTGTCGTTGAACGATGCCGG CAAGCAGCGGTCGACCAGCGAAAGCAGCAGTGAAATACTACCACGGAAACGGGCGATCGC GCCCCGACCGAGACTTGACTCTTCCTCCGAACAGTCGGAAAAGCAAGCAGCCGTCCCAGA CGAAACCACCAGCAGCAAGGCACCGCGTAGAAACGGCGCCGCCTTTCTCGCGAGCAGCAG CGGCACAGGCCGCGTATCATCAGCCCACCAAGTACGCCACCGTCGCTTGCCTCGGAAACG ACGTCGCAACAATCGGACGCCGGCAGTACCACCGGCGGCGCGAGCGCCAGCGAAGATCTG AAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGT ACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGC AAAACAACCCCGGCGAGCAGGAGCGATGGGTCGACGGAGGAGACAATTTCACCGCCCCGA ATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAAA AAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACGAACGCGTAGC GCGACGGATCCACCAAAGCGAAGCAGAACGACCACGGAGGACACCGATGGCAAACAGCTG AACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAAA GCAAAGAAGGACAAGGCACAGAACAATATACTGAACTATTTTAATCGCTGCTGAGTTGAA TCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGGC ATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTCCGGAGGGA GAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGTG CCATCGTTGCCCCCATTGCATTTCTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTGG CATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATGTTATTG TTCTAGCTTATCTATTCTAGTATTAGTTTTTTTTCTCTGTACAACCGAAACATGTTTTGA TGCGATTTGGTTTTTAATTGACCCTCTTTTCTGCATTAATTGCACATTGTACATTTTAAC AAAAGCCCCATCGCTCTAATGACTTGCCTGACTGACTGGCTTTAGCGTGTTACAAGTGAA ATAAAACTATTTTTGAAAATATGCGCGCGCG



consensusID : consensus_9125#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 539
fasta sequence
                              [CGAACAGTCGGAAAAGCAAGCAGCCGTCCCAGACGAAACCACCAGCAGCAAGGCACCGCGTAGCAAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCCACCAAGTACGCCACCGTCGCTTGCCTCGGAAACGACGTCGCAACAATCGGACACCGGCAGTACCACCGGTGGCGCCGACGCCAGCGAAGATCTGAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGATGGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAACCGGCACCAAAAAACAGGGTAGCCCAGCAGAAGGCGGTAAACGTGCAATAGCGTGTTACAAGTGAAATAAAACTATTTTGAAAATATGCCGCGCGC]

[+] EMBL BX617955             [CGAACAGTCGGAAAAGCAAGCAGCCGTCCCAGACGAAACCACCAGCAGCAAGGCACCGCGTAGCAAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCCACCAAGTACGCCACCGTCGCTTGCCTCGGAAACGACGTCGCAACAATCGGACACCGGCAGTACCACCGGTGGCGCCGACGCCAGCGAAGATCTGAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGATGGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAACCGGCACCAAAAAACAGGGTAGCCCAGCAGAAGGCGGTAAACGTGCAATAGCGTGTTACAAGTGAAATAAAACTATTTTGAAAATATGCCGCGCGC]


>consensus_9125#1 CGAACAGTCGGAAAAGCAAGCAGCCGTCCCAGACGAAACCACCAGCAGCAAGGCACCGCG TAGCAAACGGCGCCGCCTTTCTCGCGAGCAGCAGCGGCACAGGCCGCGTATCATCAGCCC ACCAAGTACGCCACCGTCGCTTGCCTCGGAAACGACGTCGCAACAATCGGACACCGGCAG TACCACCGGTGGCGCCGACGCCAGCGAAGATCTGAAACACACCACCACCCCCACCTCGTC CTCCTCCCACCCCACTCCCGCTTCGGTCGGGAGTACACCGAACCGGCAGCAGCACCAGCA GTCGATCCTAAAGTTTGTCAACTGTTCGGCGCGCAAAACAACCCCGGCGAGCAGGAGCGA TGGGTCGACGGAGGAGACAATTTCACCGCCCCGAATGAAGCAGACCGGGGGAAGTGGGAG CAGTGACCCTGGCAAGGCGGAAACCGGCACCAAAAAACAGGGTAGCCCAGCAGAAGGCGG TAAACGTGCAATAGCGTGTTACAAGTGAAATAAAACTATTTTGAAAATATGCCGCGCGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9125#0      GAGCATTTTCCGGCAGAAAATGCGTGGCAACAAAACGAAACCATTGCAAAAACTGTATAA 60
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      GCCATCACGCAGGCGATCATCACTAGGACCGGAGCGCACCACAAAGCTATCGGTCGATAC 120
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      AGGCTGCAACAAACCGGAAGACGCTAAACACACCAACCACTCAAATGCATCATCCAATAA 180
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      CGATGATGATGGCAGGAGAACGAGACAGCTGTCCAGAAGACTGTCGTTGAACGATGCCGG 240
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      CAAGCAGCGGTCGACCAGCGAAAGCAGCAGTGAAATACTACCACGGAAACGGGCGATCGC 300
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      GCCCCGACCGAGACTTGACTCTTCCTCCGAACAGTCGGAAAAGCAAGCAGCCGTCCCAGA 360
consensus_9125#1      ---------------------------CGAACAGTCGGAAAAGCAAGCAGCCGTCCCAGA 33
                                                 *********************************

consensus_9125#0      CGAAACCACCAGCAGCAAGGCACCGCGTAG-AAACGGCGCCGCCTTTCTCGCGAGCAGCA 419
consensus_9125#1      CGAAACCACCAGCAGCAAGGCACCGCGTAGCAAACGGCGCCGCCTTTCTCGCGAGCAGCA 93
                      ****************************** *****************************

consensus_9125#0      GCGGCACAGGCCGCGTATCATCAGCCCACCAAGTACGCCACCGTCGCTTGCCTCGGAAAC 479
consensus_9125#1      GCGGCACAGGCCGCGTATCATCAGCCCACCAAGTACGCCACCGTCGCTTGCCTCGGAAAC 153
                      ************************************************************

consensus_9125#0      GACGTCGCAACAATCGGACGCCGGCAGTACCACCGGCGGCGCGAGCGCCAGCGAAGATCT 539
consensus_9125#1      GACGTCGCAACAATCGGACACCGGCAGTACCACCGGTGGCGCCGACGCCAGCGAAGATCT 213
                      ******************* **************** *****   ***************

consensus_9125#0      GAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAG 599
consensus_9125#1      GAAACACACCACCACCCCCACCTCGTCCTCCTCCCACCCCACTCCCGCTTCGGTCGGGAG 273
                      ************************************************************

consensus_9125#0      TACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCG 659
consensus_9125#1      TACACCGAACCGGCAGCAGCACCAGCAGTCGATCCTAAAGTTTGTCAACTGTTCGGCGCG 333
                      ************************************************************

consensus_9125#0      CAAAACAACCCCGGCGAGCAGGAGCGATGGGTCGACGGAGGAGACAATTTCACCGCCCCG 719
consensus_9125#1      CAAAACAACCCCGGCGAGCAGGAGCGATGGGTCGACGGAGGAGACAATTTCACCGCCCCG 393
                      ************************************************************

consensus_9125#0      AATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAAGCGGCACCAA 779
consensus_9125#1      AATGAAGCAGACCGGGGGAAGTGGGAGCAGTGACCCTGGCAAGGCGGAAACCGGCACCAA 453
                      ************************************************** *********

consensus_9125#0      AAAACAGGGTAGCCCAGCAGATGGCGGTAAACGTGCAATAGCGGTCAAACGAACGCGTAG 839
consensus_9125#1      AAAACAGGGTAGCCCAGCAGAAGGCGGTAAACGTGCAATAGCG-TGTTACAA--GTGAAA 510
                      ********************* ********************* *   ** *  * * * 

consensus_9125#0      CGCGACGGATCCACCAAAGCGAAGCAGAACGACCACGGAGGACACCGATGGCAAACAGCT 899
consensus_9125#1      TAAAACTATTTTGAAAATATGCCGCGCGC------------------------------- 539
                          **   *     **   *  **                                   

consensus_9125#0      GAACGACAGCAACGGCACACTGCAGGCGCCAACAACGAGTAAAGCGACCGCCGCAAACAA 959
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      AGCAAAGAAGGACAAGGCACAGAACAATATACTGAACTATTTTAATCGCTGCTGAGTTGA 1019
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      ATCTGTGGATGCTCAGCAGGACAACCGATGCTGGCGTGCTGCTACTGTTGGTTCGTCCGG 1079
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      CATTTAGGTGACTTTTGAACAGTTTTATCTTAGCTAATGAACGATACTGATTCCGGAGGG 1139
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      AGAGCGGTGTGTAGCAAGAAATGTTGGTCGCAACAGATTGCCAGCAGCTATGACATGGGT 1199
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      GCCATCGTTGCCCCCATTGCATTTCTTTTTTTTTATTTTCCTGCTTTTCGGATCGTCCTG 1259
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      GCATTTACGAACATTTACCTACTGTATAACGTTGTGTACTGGATGGTGAATAATGTTATT 1319
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      GTTCTAGCTTATCTATTCTAGTATTAGTTTTTTTTCTCTGTACAACCGAAACATGTTTTG 1379
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      ATGCGATTTGGTTTTTAATTGACCCTCTTTTCTGCATTAATTGCACATTGTACATTTTAA 1439
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      CAAAAGCCCCATCGCTCTAATGACTTGCCTGACTGACTGGCTTTAGCGTGTTACAAGTGA 1499
consensus_9125#1      ------------------------------------------------------------
                                                                                  

consensus_9125#0      AATAAAACTATTTTTGAAAATATGCGCGCGCG 1531
consensus_9125#1      --------------------------------
                                                      




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)