These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9127#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 2584 fasta sequence [CGACCCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACGACGGTGATGGCCATCAACCATCAACCAATAGTATCATGCATGCCAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACAT--ACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCATATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTCTTTCGTAGTTAAATGCATCTGACACGGGGGAGTGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCACATTCACATATACTTCTCTTTCTCTTATCTATGACACGCACGCACTCACACCATATCCCGTCCAATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACAGGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTTATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTATTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTACAGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGTAAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAACTATGTACATAAAAAAGCGGGGAAATTAAAGCAGATTAGATTGAGGCTGCCCAAACCGCGATCTCTTTTTCAATTCATCGCTGTTTAACGTGAGAACGTAGGGAACGGGGTAGGATTGGGAGTGTGGGGGGGTGTGGTTATCTTCTCCCAGTTTTATCACACGCATGGTTTTGTGGCTCCCCACATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAA-CCTTCCTCTGTGTGAAACACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTACCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACCGTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCATCCCGGTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGCCATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGACGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGGTGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCACCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACTGGCCACCGGGCATCCACTGTCGCGGTTGTTGTTGTTGTTGTTCTTGCAATCATCGTCCGCATCGCCCTCCATAGGGGTGTCCGGCTCCTCGGCCGTGATCCCGTCCTGCGTG] [-] EMBL BM645000 [CGACCCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACGACGGTGATGGCCATCAACCATCAACCAATAGTATCATGCATGCCAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGcgg ] [-] EMBL BX620260 [ CACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAACCAGCGACATCAACATAAAAACTGCACATCATGCTACGACGGTGATGGCCATCAACCATCAACCAATAGTAACATGCATGCTAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACATCCTCCNCNCCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACAT ACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTTAATTGGTTCGATCC ] [-] EMBL BX622770 [ TAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACAACGGTGATGGCCATCAACCATCAACCAATAGAATCATGCATGCCAAAAACATCCTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCATATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCT ] [-] EMBL BX627286 [ GGTGATGNCCATCANCCATCAACCAATAGTATCATGCATGCCAAAAACATCNTATTACTATGACCCCGCCCGTCAGCAGCATCCATCATCATCACCACCACCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGA TTTTTTTACATCTATCTTACAAGAATAGTAGTAAACAACAGAGACTGAAAAAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACAT ACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTG TTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTCTTTCGTAGTT ] [-] EMBL BM640167 [ TTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCACCATTATTGTACTGCTTCTTTCGTAGTTAAATGCATCTGACACGGGGGAGTGGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCACATTCACATATACTTCTCTTTCTCTTATCTATGACACGCACGCACTCACACCATATCCCGTCCAATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACAGGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTTATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTATTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTACAGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGTAAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATcgg ] [-] EMBL BM637111 [ CTCACATTCACATATACTTCTCTTTCTCTTAGTTATGACACGCACGCACTCACACCATAT CCGTCCAATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACAGGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTTATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTATTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTACAGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGTAAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAACTATGTACATAAAAAAGCGG ] [-] EMBL BM638231 [ ATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATGGCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGGAGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAACTATGTACATAAAAAAGTAAGGAAATTAAAGCAGATTAGATTGAGGCTGCCCAAACCGCGATCTCTTTTTCAATTCATCGCTGTTTAACGTGAGAACGTAGGGAACGGGGTAGGATTGGGAGTGTGGGGGGGTGTGGTTATCTTCTCCCAGTTTTATCACACGCATGGTTTTGTGGCTCCCCACATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCATACAAAACTAAACCCTTCCTCTGTGTG CACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTACCATTCTCcgg ] [+] EMBL AGA285271 [ ATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAA CCTTCCTCTGTGTGAAACACTGCTGTGTACACTGTATTTACAGGATGTTGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCAAAAGAAGGCCGGTTGTGCACATTTACCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACCGTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCATCCCGGTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGC ] [-] EMBL BM649257 [ taAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAC CCTTCCTCTGTGTAAAACACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGCAAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTACCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACCGTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCATCCCGCTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGCCATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGACGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGGTGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCACCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACTGGCCACCGG ] [-] EMBL AGA283975 [ TGCGGTACGCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATATGGCAAGTGTGGGCGATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGACGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGGTGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCACCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACTGGCCACACTGCATCCACTGTCGCGGTTGTTGTTGTTGTTGTTCTTGCAATCATCGTCCGCATCGCCCTCCATAGGGGTGTCCGGCTCCTCGGCCGTGATCCCGTCCTGCGTG] consensusID : consensus_9127#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 797 fasta sequence [CCGGCGNNGGGTGGCCGTTGTGCANCCGCAGTGGGGGTTGNNGCCGGCCGAAGCCAGGGGGTCCGGGATTGGAGGTAGTGGGGGGNTTGGGGTGTGGGGAGTGTTGNGTGTGGTGTGTAAGCGAGTNGNGTGNTGCNGGTGTNGAGCGTAGGNTANTAGGGTTAAGGTTGAGGCCGGNGCCAGGGTAGGACTTGGNGGTGNGCCTGGCCAAGCCCCNACATCACCAAGTTGCCAGTGGGTGGGCATTCTGCATTCTGTTCGACGACCGCTNCCACACGTGAAGCCGCAGGTGATTGGTTGCAGAGTTTGGACCAAGGATCACACACACATACTACTACAGCTACTATATTAAACATCGTGTAAGCTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTNNGTTGCTTGTCGTGTTCAGATAGTGTTAAACTCTCGTTAGTGTTTTCAAATCCATGTGAAAATCTAATTTAAGGTACGCGCATTTTATATTACAAGTGTAATGTGAACGTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTGTGGTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTAAANCTCGGGGGGATTCT] [-] EMBL AL694946 [CCGGCGNNGGGTGGCCGTTGTGCANCCGCAGTGGGGGTTGNNGCCGGCCGAAGCCAGGGGGTCCGGGATTGGAGGTAGTGGGGGGNTTGGGGTGTGGGGAGTGTTGNGTGTGGTGTGTAAGCGAGTNGNGTGNTGCNGGTGTNGAGCGTAGGNTANTAGGGTTAAGGTTGAGGCCGGNGCCAGGGTAGGACTTGGNGGTGNGCCTGGCCAAGCCCCNACATCACCAAGTTGCCAGTGGGTGGGCATTCTGCATTCTGTTCGACGACCGCTNCCACACGTGAAGCCGCAGGTGATTGGTTGCAGAGTTTGGACCAAGGATCACACACACATACTACTACAGCTACTATATTAAACATCGTGTAAGCTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTNNGTTGCTTGTCGTGTTCAGATAGTGTTAAACTCTCGTTAGTGTTTTCAAATCCATGTGAAAATCTAATTTAAGGTACGCGCATTTTATATTACAAGTGTAATGTGAACGTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTGTGGTTGCACATTTCAATTCCCTACCCTACCCTACACATACAAGCTATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGCTGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTGCAACATTATTGTACTGCTTAAANCTCGGGGGGATTCT] consensusID : consensus_9127#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 645 fasta sequence [ACCATCATATCCATAGTATCATGCATGCCCATTAACATCCTATTACTTATGACCCCGCCCTGTCAGCAGCATCCATCATCATCACCTACCTANCCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTACATCTATCTTACAAGAATAGTAGTACACAACAGAGACTGAANNNAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACCCTACACATACAAGCTATCTATGTCGTCCNANCGTGCNGATTCTTGGCC] [-] EMBL BX467173 [ACCATCATATCCATAGTATCATGCATGCCCATTAACATCCTATTACTTATGACCCCGCCCTGTCAGCAGCATCCATCATCATCACCTACCTANCCACACCACCTGTGCTTTCACCATGGTTACGACGATCAGGTCGATTATATGGGCTGGTGGGATTTTTTTACATCTATCTTACAAGAATAGTAGTACACAACAGAGACTGAANNNAAACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTATTGTGTTGCTGTTTTTTGCACATTTCAATTCCCTACCCTACCCTACCCTACACATACAAGCTATCTATGTCGTCCNANCGTGCNGATTCTTGGCC] consensusID : consensus_9127#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 432 fasta sequence [TATGGCCCTGGTGGGATTTTTTTACATCTATCTTGACAAGAATAGTAGTAAACAACAGAGACTGAANNGANAGACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTCCTCGTGCGCGATTCTGCC] [-] EMBL BX467509 [TATGGCCCTGGTGGGATTTTTTTACATCTATCTTGACAAGAATAGTAGTAAACAACAGAGACTGAANNGANAGACTGCACCCCACACACAATCATGTTGCATCTGCATTCTGTTCAACACCCTCCACACCTAAGCCGCAGGTATTGTTGCAGATTTTGACAAGGATCACACACACATACACACACACATATTAAACATCTTAACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCCATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTTTTCAGATATTTAAACTCTCGTTAGTGTTTTCAAATCCATTTAAAATCTAATTTAAGGTACGCGCATTTATATTACAAGTTTAATTTAACTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGTCCTCGTGCGCGATTCTGCC] consensusID : consensus_9127#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 415 fasta sequence [TAAAGTGTGCGCAAAAGATGACAAAAAACAAAACCGTTCTTATATTGCTTGTGTATCTGACACCTGTGTGGTATGTCTGTGGCAAAAAAGAAGGTTTGTTTTTCTCTTCTTGTGATAGCAGCAGCACGAGGCGCACGTACGCCGTGCGAACCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATGAACATAAAAACTGCATCATGCTANCGACGGTGATGGCCATCAACCANCCTCGTGCCGAT] [-] EMBL BX619187 [TAAAGTGTGCGCAAAAGATGACAAAAAACAAAACCGTTCTTATATTGCTTGTGTATCTGACACCTGTGTGGTATGTCTGTGGCAAAAAAGAAGGTTTGTTTTTCTCTTCTTGTGATAGCAGCAGCACGAGGCGCACGTACGCCGTGCGAACCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATGTTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATGAACATAAAAACTGCATCATGCTANCGACGGTGATGGCCATCAACCANCCTCGTGCCGAT] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CGACCCCACACACATACACACACACACTTACCCACACGGGGTTACCTTCTATATTTTATG 60 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TTCCTGCTCTTTGCTACGCCTGATTATTGTTGCTCACAATCGTTTCGCAAGGGTCACTTC 120 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TCTGTAGCGTTTATCTTATCGTTCTTGACGTTATATTTTGTTTCTGTCGTTTGCTTCAAA 180 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TGTTAGAAAGATAGGAAAATCAGCGACATCAACATAAAAACTGCACATCATGCTACGACG 240 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 -------------ACCATCATATCCATAGTATCATGCATGCCCATTAACATCCTATTACT 47 consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 --------------CCGGCGNNGGGTGGCCGTTGTGCANCCGCAGTGGGGGTTGNNGCCG 46 consensus_9127#0 GTGATGGCCATCAACCATCAACCAATAG-TATCATGCATGC-CAAAAACATCCTATTACT 298 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 TATGACCCCGCCCTGTCAGCAGCATCCATCATCATCACCTACCTANCCACACCACCTGTG 107 consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 GCCGAAGCCAGGGGGTCCGGGATTGGAGGTAGTGGGGGGNTTGGGGTGTGGGGAGTGTTG 106 consensus_9127#0 AT--GACCCCGCCCGTCAGCAGCATCCATCATCATCACCACC---ACCACACCACCTGTG 353 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 CTTTCACCATGGTTACGACGATCAGGTCGATTATATGG-GC-TG-GTGGGATTTTTTTAC 164 consensus_9127#3 ---------------------------------TATGG-CCCTG-GTGGGATTTTTTTAC 25 consensus_9127#1 NGTGTGGTGTGTAAGCGAGTNGNGTGNTGCNGGTGTNGAGCGTA-GGNTANTAGGGTTAA 165 consensus_9127#0 CTTTCACCATGGTTACGACGATCAGGTCGATTATATGG-GCTGG-TGGGATTTTTTTTAC 411 consensus_9127#4 -----------------------------------TAAAGTGTGCGCAAAAGATGACAAA 25 * * consensus_9127#2 ATCTATCTT-ACAAGAATAGTAGT-ACACAACAGAGA-CTGAANNNAAA--CTGCACCCC 219 consensus_9127#3 ATCTATCTTGACAAGAATAGTAGT-AAACAACAGAGA-CTGAANNGANAGACTGCACCCC 83 consensus_9127#1 GGTTGAGGCCGGNGCCAGGGTAGG-ACTTGGNGGTGNGCCTGGCCAAGCCCCNACATCAC 224 consensus_9127#0 ATCTATCTT-ACAAGAATAGTAGT-AAACAACAGAGA-CTGAAAAAAA---CTGCACCCC 465 consensus_9127#4 AAACAAAACCGTTCTTATATTGCTTGTGTATCTGACACCTGTGTGGTATGTCTGTGGCAA 85 * * * * * * consensus_9127#2 ACA--CACAATCATGTTG-CAT-CTGCATTCTGTTCAACACCC---TCCACACCT-AAGC 271 consensus_9127#3 ACA--CACAATCATGTTG-CAT-CTGCATTCTGTTCAACACCC---TCCACACCT-AAGC 135 consensus_9127#1 CAAGTTGCCAGTGGGTGGGCATTCTGCATTCTGTTCGACGACCGCTNCCACACGTGAAGC 284 consensus_9127#0 ACA--CACAATCATGTTG-CAT-CTGCATTCTGTTCAACACCC---TCCACACCT-AAGC 517 consensus_9127#4 AAA------AGAAGGTTT--GTTTTTCTCTTCTTGTGATAGCA---GCAGCACG---AGG 131 * * ** * * * * * * * * *** ** consensus_9127#2 CGCAGGTATT--GTTGCAGATTTTGA--CAAGGATCACACACACATACACACACA----- 322 consensus_9127#3 CGCAGGTATT--GTTGCAGATTTTGA--CAAGGATCACACACACATACACACACA----- 186 consensus_9127#1 CGCAGGTGATTGGTTGCAGAGTTTGGACCAAGGATCACACACACATACTACTACAGCTAC 344 consensus_9127#0 CGCAGGTATT--GTTGCAGATTTTGA--CAAGGATCACACACACATACACACACA----- 568 consensus_9127#4 CGCACGTACGCCGT-GCGAACCCACACACATACA-CACACACACTTACCCACACGGG-GT 188 **** ** ** ** * ** * ********* *** ** consensus_9127#2 CATATTAAACATCTT---AACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 379 consensus_9127#3 CATATTAAACATCTT---AACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 243 consensus_9127#1 TATATTAAACATCGTGTAAGCTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 404 consensus_9127#0 CATATTAAACATCTT---AACTGTACTATCCTCGCTTTTAGTGCTAAATTGGTTCGATCC 625 consensus_9127#4 TACCTTCTATATTTT-----ATGTTCC-TGCTCTTTGCTA-CGCCTGATTATTGTTGCTC 241 * ** * ** * *** * * *** * ** ** *** * * consensus_9127#2 ATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTT-TTCAGATATT----TAAAC 434 consensus_9127#3 ATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTT-TTCAGATATT----TAAAC 298 consensus_9127#1 ATCTTCCTGTCCTACCTGCCACATCTNNGTTGCTTGTCGTGTTCAGATAGTGT--TAAAC 462 consensus_9127#0 ATCTTCCTGTCCTACCTGCCACATCTTTGTTTGCTTTCTT-TTCAGATATT----TAAAC 680 consensus_9127#4 ACAATCGTTTCGCAAGGGTCACTTCTCTGTAGCGTTTATCTTATCGTTCTTGACGTTATA 301 * ** * ** * * *** *** ** * * * * * * * * consensus_9127#2 TCTCGTTAGTGTTTTCAAATCCATTT--AAAATCTAATTTAAGGTACGCGCATTT-ATAT 491 consensus_9127#3 TCTCGTTAGTGTTTTCAAATCCATTT--AAAATCTAATTTAAGGTACGCGCATTT-ATAT 355 consensus_9127#1 TCTCGTTAGTGTTTTCAAATCCATGTG-AAAATCTAATTTAAGGTACGCGCATTTTATAT 521 consensus_9127#0 TCTCGTTAGTGTTTTCAAATCCATTT--AAAATCTAATTTAAGGTACGCGCATTT-ATAT 737 consensus_9127#4 TTTTGTTTCTGTCGTTTGCTTCAAATGTTAGAAAGATAGGAAAATCAGCGACATGAACAT 361 * * *** *** * * ** * * * * ** * *** * * ** consensus_9127#2 TACAAGTTTAATTTAAC--TACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGT 549 consensus_9127#3 TACAAGTTTAATTTAAC--TACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGT 413 consensus_9127#1 TACAAGTGTAATGTGAACGTACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCGT 581 consensus_9127#0 TACAAGTTTAATTTAAC--TACATTCGTGCGTGCATGCATGCATGCGTGCGTGCGTGCAT 795 consensus_9127#4 AAAAACTGCATCATGCT--ANCGACGGTGATGGCCATCAACCANCCTCGTGCCGAT---- 415 * ** * * * * *** ** ** ** * * * * consensus_9127#2 ATTGTGTTGCTGTTTT--TTGCACATTTCAATTCCCTACCCTACCCTACCCTACACATAC 607 consensus_9127#3 CCTCGTGCGCGATTCT--GCC--------------------------------------- 432 consensus_9127#1 ATTGTGTTGCTGTTGTGGTTGCACATTTCAATTCCCTACCCTACCCTACAC-ATACAAGC 640 consensus_9127#0 ATTGTGTTGCTGTTTT--TTGCACATTTCAATTCCCTACCCTACCCTACAC-ATACAAGC 852 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 AAGCTATCTATGTCGTCCNANCGTGCNGATTCTTGGCC---------------------- 645 consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 TATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGC 700 consensus_9127#0 TATCTATTGTCGATTCCGTCATATAGTTATCATTGCCATCTAATGCATTTCCTGTTGTGC 912 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 TGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTG 760 consensus_9127#0 TGGACCATGTTCGCGCGGATGATGCATTGTGTTGTTAGCCGAGTGTATGATCACTGTGTG 972 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 CAACATTATTGTACTGCTTAAANCTCGGGGGGATTCT----------------------- 797 consensus_9127#0 CAACATTATTGTACTGCTTCTTTCGTAGTTAAATGCATCTGACACGGGGGAGTGGCTCTC 1032 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCACAT 1092 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TCACATATACTTCTCTTTCTCTTATCTATGACACGCACGCACTCACACCATATCCCGTCC 1152 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 AATTTAAAGTAACGCTCCCCAAAATGTGGACCCACACAACTTTATATCTTCAGTATAACA 1212 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 GGAATCGTTTAACAGGTATGTGCACACTTAAGCGAGCTGACGTTTCGCCGCATACATTTT 1272 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 ATGATATGGCTTGTTTTTTTGTCCTTATTTGCCTTTTAACCGTGAGCTGCACTTGTGCTA 1332 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TTAGGTAAAAGCTGGCCCAAAACGCAAAGACTTTGCAACAGGATATGATTGGTCATTTAC 1392 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 AGATATGAAATTAGAGTGGAATACGGGAAGGATATTTTTCAAAAAAGAAGTTTAAGAAGT 1452 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 AAAAAAATGAATCCAAACATCCGAAATGATAAAACTCTGTTGTACTGATTTAAAGCAATG 1512 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 GCGCAATCAACTCTAGAGCAATGTAGGGCTTTCCATCCACTAATTATAAAGTACGGAGGG 1572 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 AGGATTTTGCTTATATAGAAAATAGAATTAGACACGACCGGACGAGATCGATCTGGGAAA 1632 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CTATGTACATAAAAAAGCGGGGAAATTAAAGCAGATTAGATTGAGGCTGCCCAAACCGCG 1692 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 ATCTCTTTTTCAATTCATCGCTGTTTAACGTGAGAACGTAGGGAACGGGGTAGGATTGGG 1752 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 AGTGTGGGGGGGTGTGGTTATCTTCTCCCAGTTTTATCACACGCATGGTTTTGTGGCTCC 1812 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CCACATAGTTCACCGTATTTAAAGCATTGTGTTATAGCAGCCGTACAAAACTAAACCTTC 1872 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CTCTGTGTGAAACACTGCTGTGTACACTGTATTTACAGGATGTCGAGAAGGACGAGAAGC 1932 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 AAATGATACACTGCTGGCAGCTGCTGCGGCTCCCCAAAGAAGGCCGGTTGTGCACATTTA 1992 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CCATTCTCACTATCTCCCGCGCTTGGACGCTTTACGCCGTTTCCGAGCCCATCAGGAACC 2052 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 GTTTGCGTTGCGATGATCATCCAGCGAATGGCAGGTGGTTGATGGGTTTGGCGTCGCGCA 2112 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TCCCGGTACCGTCGCCATCGGTGTCAGCCCTGTTGCCAGGCTCGATGGTCGGTGCGGTAC 2172 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 GCTAAAGGACGCTAACTTTCTAGCCCCCATCGTCAACGGTACGCCCATGGTCGGCGATAT 2232 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 GGCAAGTGTGGGCCATGGCGTGGACGACAGCGAGGACGTGGAGCAGCAGGACGACGACGA 2292 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CGACGCGGAAGACGAGGAGGACGCGGACAGCGGCGACGGGGACGAAGGAGGTGATGTCGG 2352 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 TGTCGTCGGTAGTTTCAGCGTTAACCGTGGTGGCACAAATCGACCTCCGTTGAATCCGCA 2412 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 CCGATAGCTGGCGGTCGACAGCGACGACGAGGAGCTGGACGAGGCAGATGAGGACGAACT 2472 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ------------------------------------------------------------ consensus_9127#3 ------------------------------------------------------------ consensus_9127#1 ------------------------------------------------------------ consensus_9127#0 GGCCACCGGGCATCCACTGTCGCGGTTGTTGTTGTTGTTGTTCTTGCAATCATCGTCCGC 2532 consensus_9127#4 ------------------------------------------------------------ consensus_9127#2 ---------------------------------------------------- consensus_9127#3 ---------------------------------------------------- consensus_9127#1 ---------------------------------------------------- consensus_9127#0 ATCGCCCTCCATAGGGGTGTCCGGCTCCTCGGCCGTGATCCCGTCCTGCGTG 2584 consensus_9127#4 ---------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||