cluster # 9137

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Anopheles gambiae
cluster # 9137 cluster # 9137 Sequences # 14 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9137#0 length = 1779 sequences # 9

consensus_9137#1 length = 935 sequences # 4
consensus_9137#2 length = 578 sequences # 1

consensusID : consensus_9137#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1779
fasta sequence

                              [CCGGACCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC-GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGC-TGAAGCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTG-CCGGTGGCTCATCCAACGGGCTGCTGATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACGTGGATCGCTTAGTAATAA-AAGTAAGAACTTTCTTTTGTA]

[+] EMBL BM640074             [CCGGAAAAGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL BM579119             [     CCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM616413             [     CCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAACAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGCGGGGCAGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CNS08U6B             [             GAGCGTG ATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCTGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGC TGAAGCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTG CCGGTGGCTCATCCAACGGGCTGCTGATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CNS08GQB             [                         TGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGC TGAAGCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM579880             [                                                                                                                                                                                       ccgGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGTGATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCCTACCGC GGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTTGAAGCCGCTGTTCCACAAGATGACGCGCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM592249             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTCATCCAACGGGCTGCTGATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CNS08U6C             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         GGCTGCTGATGGATGGGGAGGAGGAGGGGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACGTGGATCGCTTAGTAATAA AAGTAAGAACTTTCTTTTGTA]
[-] EMBL CNS08GQC             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGGGGGCGGTGGACACACAAACGGTGGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACGTGGATCGCTTAGTAATAACAAGTAAGAACTTTC       ]




>consensus_9137#0
CCGGACCGGCGCTGAGCGCGTATGTTGATGTTTTGCACTTTTCTTTGTCGCAGTCGCGCG
TGTATTTTACGGCAAGGTAAAAATTCCACTTTTATCACATCCCGCGTTATCTTCCCGGTG
CAAACGTTACATTAATCACGGGCAAACAGTTTGGTGACTCGATCGGTACCCGGCGGAAGC
TGTATAGTCCAAGTGAAATCGCACCGCAGTGCACCACCACGACGGGCATTGTTGTGTGTC
CGTGTCCCTTCTCGGCGTATTGCGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACA
GGTCCGGCAGCTCCCACCGGCAGTTCCTGGGTCCCGGGTGCTTTGCGTTTCCTGTCTTGT
GATCGTTGGAACTGACGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGA
CAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGA
GCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTT
CGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGT
CTTCCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGAC
GGTGGTGCTGCTGACCTGCTCCTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCAT
CAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAGCCGCTGTTCCA
CAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTG
GGACGATGCGCCGGCGAACGGGGGGGTGCCGGTGGCTCATCCAACGGGCTGCTGATGGAT
GGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGTGGCGGC
GACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCACCCGCAC
CATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGACGACAAC
AGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCGCTGGCG
ATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCCCTTGTT
CCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTTAGGGCT
AGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGTGAGAGA
AAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGACTTTCTT
GTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGCGCCTGA
AATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTTTCTTTG
GACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAACGTTCC
CCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGGGAGTGG
GAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAAGTAAAC
AAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAGGAAACG
TGGATCGCTTAGTAATAAAAGTAAGAACTTTCTTTTGTA

consensusID : consensus_9137#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 935
fasta sequence

                              [GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGTTTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTTTAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTTTGGTGACTCGATCGGTACAC-GGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTGCACCACCACGAC-GGGCATTGTTGTGTGT-CCGTGTCCCTTCACGGCGTATTGC-GCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGG-TCCGGCAGCTC-CTA-GCGG-CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG-AAAACTCCCCCAACCTCGG-GCGGTACGATGG-CAAAGGTGCAC-ATCACGAACGTGG-T-GGTGCTGGACAATCCCA-GC--AGCTTCCTGAACCCG-TTCCAGTTCGAGCTGACGTTCGAGTGCA-TCGA-GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAGCCCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTC]

[+] EMBL AL696591             [GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGTTTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTTTAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTTTGGTGACTCGATCGGTACACTGGCGGAAGCTGTGCAGCACAAGTGAAATCACA CACAGTGCACCA CA GACGGGGCATTGTTGTGTGTNCCGTGTCCCTTCACGGCGTATTGCGGCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGGTTCCGGCAG TCACTAGGCGGCCAGTTCCCGGGTACCAGGGGCTTTGCGTTACCTGTCGAGTCGTGATCGTGGCAAGTGACCGAAAAACTCCCCCAA CTCGGAGCGGTACGATGGCCAACGGTGCACNATCA GAACGTGGATCGGTGCTGGACAATCCCANGCAGAGCTTCCTGAACCCGTTTCCAGTNCGAGCTGACGTTCGAGTGCACTCGAGGGAGCTGAAGG                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BX604407             [                                                                                           TATTTTACGGCAAGGTAAAAACCCCACTTTAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTTTGGTGACTCGATCGGTACAC GGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTGCACCACCACGAC GGGCATTGTTGTGTGT CCGTGTCCCTTCACGGCGTATTGC GCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGG TCCGGCAGCTC CTA GCGG CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG AAAACTCCCCCAACCTCGG GCGGTACGATGG CAAAGGTGCAC ATCACGAACGTGG T GGTGCTGGACAATCCCA GC  AGCTTCCTGAACCCG TTCCAGTTCGAGCTGACGTTCGAGTGCA TCGA GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCG                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL BM598552             [                                                                                                                                                                                   ccgcgGACGCG TGGG  CAC GGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTGCACCACCACGAC GGGCATTGTTGTGTGT CCGTGTCCCTTCACGGCGTATTGC GCGTGTAGAGTGTGTGTGTGGATAATTCTAGAACACAGG TCCGGCAGCTC CTA GCGG CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG AAAACTCCCCCAACCTCGG GCGGTACGATGG CAAAGGTGCAC ATCACGAACGTGG T GGTGCTGGACAATCCCA GC  AGCTTCCTGAACCCG TTCCAGTTCGAGCTGACGTTCGAGTGCA TCGA GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAGCCCGCTGTTCCACAAGA                                                                                              ]
[+] EMBL BX606285             [                                                                                                                                                                                                                                                                                                                                            AGG TCCGGCAGCTC CTA GCGG CAGTTCCCGGGTCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCG AAAACTCCCCCAACCTCGG GCGGTACGATGG CAAAGGTGCAC ATCACGAACGTGG T GGTGCTGGACAATCCCA GC  AGCTTCCTGAACCCG TTCCAGTTCGAGCTGACGTTCGAGTGCA TCGA GGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAG CCGCTGTTCCACAAGATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTC]




>consensus_9137#1
GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGT
TTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTT
TAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTT
TGGTGACTCGATCGGTACACGGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTG
CACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCACGGCGTATTGCGCGTGTAG
AGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCTAGCGGCAGTTCCCGGG
TCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCGAAAACTCCCC
CAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATC
CCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGA
AGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACC
AGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCCACATCTTCGTCTTCC
AGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGG
TGCTGCTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACA
ACGAGTACGCCGATCCGGAGCTGCGCGAAAACCCACCGCTGAAGCCCGCTGTTCCACAAG
ATGACGCGCAACATACTGGCGTCGAAGCCGCGCGTCACCCGCTTCAAGATCAACTGGGAC
GATGCGCCGGCGAACGGGGGGGTGCCCGGTGGCTC

consensusID : consensus_9137#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 578
fasta sequence

                              [GGCCAAGAATCGGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCCCCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCGTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAAGCGAGTACGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCCACAAGATGACGCGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG]

[+] EMBL BX467899             [GGCCAAGAATCGGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCCCCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTTCCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCGTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAAGCGAGTACGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCCACAAGATGACGCGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAACTGGGACGATGCGCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG]




>consensus_9137#2
GGCCAAGAATCGGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCCCCAACCTCGGG
CGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAATCCCAGCAGCTT
CCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTGAAGGAGGACCT
GGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGACCAGGTGCTGGA
CACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTTCCAGGCGGATC
CGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGTGGTGCTGCGTG
ACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCAACAAGCGAGTA
CGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCCACAAGATGACG
CGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAACTGGGACGATGC
GCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9137#1      GTGATGCTCGAGCAGAATCGCCAGACGGNNTAAAAAGCGCTGAGCGCGTATGTCTGATGT 60
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      ----------------------------CCGGACCGGCGCTGAGCGCGTATGT-TGATGT 31
                                                                                  

consensus_9137#1      TTTGCACTTTTCTTTGTCGTAGTCGCGCGTGTATTTTACGGCAAGGTAAAAACCCCACTT 120
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      TTTGCACTTTTCTTTGTCGCAGTCGCGCGTGTATTTTACGGCAAGGTAAAAATTCCACTT 91
                                                                                  

consensus_9137#1      TAATCACATCCCGCGTTATCTTCCCGGTGCAAACTTTACGGTAATCACGGGCCAACAGTT 180
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      TTATCACATCCCGCGTTATCTTCCCGGTGCAAACGTTACATTAATCACGGGCAAACAGTT 151
                                                                                  

consensus_9137#1      TGGTGACTCGATCGGTACACGGCGGAAGCTGTGCAGCACAAGTGAAATCACACCACAGTG 240
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      TGGTGACTCGATCGGTACCCGGCGGAAGCTGTATAGTCCAAGTGAAATCGCACCGCAGTG 211
                                                                                  

consensus_9137#1      CACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCACGGCGTATTGCGCGTGTAG 300
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      CACCACCACGACGGGCATTGTTGTGTGTCCGTGTCCCTTCTCGGCGTATTGCGCGTGTAG 271
                                                                                  

consensus_9137#1      AGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCTAGCGGCAGTTCCCGGG 360
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      AGTGTGTGTGTGGATAATTCTAGAACACAGGTCCGGCAGCTCCCACCGGCAGTTCCTGGG 331
                                                                                  

consensus_9137#1      TCCCAGGGGCTTTGCGTTTCCTGTCGAGTCGTGATCGTGGCAAGTGACCGAAA-ACTCCC 419
consensus_9137#2      -------GGCCAAGAATC----GGCACGTGGAGATCGTGGCAAGTGACCGAAACACTCCC 49
consensus_9137#0      TCCCGGGTGCTTTGCGTTTCCTGTCTTGT---GATCGTTGGAACTGAC------------ 376
                              **   *  *     * *  **   ****** * ** ****            

consensus_9137#1      CCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAAT 479
consensus_9137#2      CCAACCTCGGGCGGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAAT 109
consensus_9137#0      ------------GGTACGATGGCAAAGGTGCACATCACGAACGTGGTGGTGCTGGACAAT 424
                                  ************************************************

consensus_9137#1      CCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTG 539
consensus_9137#2      CCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTG 169
consensus_9137#0      CCCAGCAGCTTCCTGAACCCGTTCCAGTTCGAGCTGACGTTCGAGTGCATCGAGGAGCTG 484
                      ************************************************************

consensus_9137#1      AAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGAC 599
consensus_9137#2      AAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGAC 229
consensus_9137#0      AAGGAGGACCTGGAGTGGAAGATGATCTACGTCGGGTCGGCCGAATCGGAAGCGTTCGAC 544
                      ************************************************************

consensus_9137#1      CAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGC-CACATCTTCGTCTT 658
consensus_9137#2      CAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGCGCACATCTTCGTCTT 289
consensus_9137#0      CAGGTGCTGGACACGATCTACGTCGGCCCGGTGCCGGAGGGCCGC-CACATCTTCGTCTT 603
                      ********************************************* **************

consensus_9137#1      CCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGT 718
consensus_9137#2      CCAGGCGGATCCGCCGAACGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGT 349
consensus_9137#0      CCAGGCGGATCCGCCGAATGTGAGCCGCATCCCGGAGCAGGACGCGGTCGGCGTGACGGT 663
                      ****************** *****************************************

consensus_9137#1      GGTGCTGC-TGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCA 777
consensus_9137#2      GGTGCTGCGTGACCTGCTCGTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCA 409
consensus_9137#0      GGTGCTGC-TGACCTGCTCCTACCGCGGGCAGGAGTTTGTGCGCGTCGGCTACTTCATCA 722
                      ******** ********** ****************************************

consensus_9137#1      ACAA-CGAGTACGCCGATCCGGAGCTGCGCGAA-AACCCACCGCTGAAGCCCGCTGTTCC 835
consensus_9137#2      ACAAGCGAGTACGCCGATCCGGAGCTGCGCGAAGAACCCACCGCTGAAGCCGCGTGTTCC 469
consensus_9137#0      ACAA-CGAGTACGCCGATCCGGAGCTGCGCGAA-AACCCACCGCTGAAGCCGC-TGTTCC 779
                      **** **************************** *****************   ******

consensus_9137#1      ACAAGATGACGCGCAACATACTGGCG-TCGAAGCCGCGCGTCACCCGCTTCAAGATCAAC 894
consensus_9137#2      ACAAGATGACGCGCAACATACTGGCGGTCGAAGCCGCGCGTCAACCGCTTCAAGATCAAC 529
consensus_9137#0      ACAAGATGACGCGCAACATACTGGCG-TCGAAGCCGCGCGTCACCCGCTTCAAGATCAAC 838
                      ************************** **************** ****************

consensus_9137#1      TGGGACGATGCGCCGGCGAAC--GGGGGGGTG-CCCGGTGGCTC---------------- 935
consensus_9137#2      TGGGACGATGCGCCGGCGAAACGGGGAGGGTGACCCGGTGGNTCCATCG----------- 578
consensus_9137#0      TGGGACGATGCGCCGGCGAAC--GGGGGGGTG--CCGGTGGCTCATCCAACGGGCTGCTG 894
                      ********************   *** *****  ******* **                

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      ATGGATGGGGAGGAGGAGGTGCAGCCGGACGAGATGGGAGACGGTGGACACACAAACGGT 954
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      GGCGGCGACGATCAGCAGATGGTGGACGGCGGATCGGACAGTGGCTCACAGCAGCAGCAC 1014
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      CCGCACCATCCGCATCATCTGCATCATCCGCCCGGCATGCTGGGGGCGGTGCACGATGAC 1074
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      GACAACAGTATCGCGATGCCCGCGACGGAAATGCCGGAATTCAACGAAAACTCCAACTCG 1134
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      CTGGCGATGGAATGCTGAGTGATGGCAGCGCTCGCGTTTGGGTTGCAAAGGGACGATGCC 1194
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      CTTGTTCCCACCTTCTCAAACAGACCTTGTCGTCGTCATCGTGGCAGTATCATCTGCTTT 1254
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      AGGGCTAGAATATAGAGTTATTATGTATAAGAGTTATTCAAAGCAACACAGAAAGAGAGT 1314
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      GAGAGAAAGAGAGCGGAGCGGCCTACTTTTGTCAACTGATGGCGTGCCGTTTGCGCCGAC 1374
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      TTTCTTGTCTCGCGAGCGGCCTCCTGCCGTATGTTTGTGTGAGGTTTGCGTGTGTGCCGC 1434
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      GCCTGAAATTGTCAGCGATTGCTTCGATTTCGATTCAACTCATTTGTGTGTCTTTCTTTT 1494
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      TCTTTGGACTCAAGTCTTGCTCGTACGAGCACAGAAGCGTTTTGTTCGGAGATCAATCAA 1554
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      CGTTCCCCCAGTTCAGCACCAAAAATTATCCCGTTCGGAGTTCATCGCGTTGAGCAGTGG 1614
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      GAGTGGGAAGCGAGAGTGGAAAACGGTGGAGAGAAGAAAAAAACTAAATTATGTAAATAA 1674
                                                                                  

consensus_9137#1      ------------------------------------------------------------
consensus_9137#2      ------------------------------------------------------------
consensus_9137#0      GTAAACAAACTCTTAAAGAAAAGCAACAAACAGAAAGTAGATAGAAGAACACTGTACGAG 1734
                                                                                  

consensus_9137#1      ---------------------------------------------
consensus_9137#2      ---------------------------------------------
consensus_9137#0      GAAACGTGGATCGCTTAGTAATAAAAGTAAGAACTTTCTTTTGTA 1779