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Anopheles gambiae
cluster # 9148 cluster # 9148       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9148#0 length = 1244 sequences # 8  
consensus_9148#1 length = 778 sequences # 4  
consensus_9148#2 length = 688 sequences # 2  

consensusID : consensus_9148#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1244
fasta sequence
                              [GGCAGAATCNGGCACGATNGCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTACCGGTACGCGAACGACGCGAACGTGCTGGCGGCCACGCACGAGCTGCACACGAAAGCGATCCGCTGCGTGGAG-TTCGTGCCCGATGGGAAGTCGCTCATCTCGACCGGGCGCGAGCGGTCGATCGTGGTGAT-GGATGCGGAGACGGGCAAATTCAAGCGCTTCTGGGAATCGGCCCACGACGAGCCGGTCTACTCGATGACGGTGCTCGGGGAGCATCTGTTTGCGACCGGGGACGACGATGGTGAGGTGAAGCTGTGGGATGTGCGTGAGCGGAATGCGGTGTTTTCGCTCCGTCCGGTGGAGGACTTTGTGTCGTCCCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAACCGTACGAGGAGGAGCTCAA-CTGCATGGGAATGTTCAAGCGCGAAA-GCAA--GCTGGT-GGTGG-GCACGTCCAAGGGCAATTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTACCGATCACGGAGCAGATTGCCGTCATGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGGGTGCTCGGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGGAGCGGCGAGCTGATCGCGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAACGTGAAGTACTTCGAGGACTTTGACGGCATCAAGTACAACAGCAAGCCGGACAAGCGTATGCTAAGGCACAATCTGCCGTCGTCGCAGCGCACCAATGCGAAGGATTTCTTCGCCGGGCTGGGCGACGATGAGTAGCGGCCACGCGGGGCAGACGTAGCGTGACAAGCACA-GGGAAGGCA-GGGGGAGAAAGTTCTTTATTTTACATTAAGGTAATATTTTGTGTAATAACGTTTTGCGTGCTAAAAGCCAGCCCGAAAGGGCCCGTGTTACGCGTTTGCGGATCGGAATTGTGGTACGGAATCAGGAGATAAAATGCGATAAAATTGTTAAGCGATGAAAATAAAAATGTATTTTACCTTCCTCCAC]

[+] EMBL BX467184             [GGCAGAATCNGGCACGATNGCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTACCGGTACGCGAACGACGCGAACGTGCTGGCGGCCACGCACGAGCTGCACACGAAAGCGATCCGCTGCGTGGAGCTTCGTGCCCGATGGGAAGTCGCTCATCTCGACCGGGCGCGAGCGGTCGATCGTGGTGATCGGATGCGGAGACGGGCAAATTCAAGCGCTTCTGGGAATCGGCCCACGACGAGCCGGTCTACTCGATGACGGTGCTCGGGGAGCATCTGTTTGCGACCGGGGACGACGATGGTGAGGTGAAGCTGTGGGATGTGCGTGAGCGGAATGCGGTGTTTTCGCTCCGTCCGGTGGAGGACTTTGTGTCGTCCCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGGGACGGTTTGCTCACGANCATTAACATTGCGCAACGCAAAATGTACGTGCAATCAGAACCGTACGAGGAGGAGCTCAAGCTGCATGGGAATGTCCAAGCGCGAAACGCAAAGGCTGGTCGGTGGAGCACGTCCAAGGGCAATTACTACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BX605143             [                                                                                                                                                       GCTGCACACGAAAGCGATCCGCTGCGTGGAG TTCGTGCCCGATGGGAAGTCACTCATCTCGACCGGACGCGAGCGGTCGATCGTGGTGAT GGATGCGGAGACGGGCAAATTCAAGCGCTTCTGGGAATCGGCCCACGACGAGCCGGTCTACTCGATGACGGTGCTCGGGGAGCATCTGTTTGCGACGGGGGATGACGATGGTGAGGTTAAGCTGTGGGATGTGCGTGAGCGGAATGCAGTGTTTTCGCTCCGTCCGGTGGAGGACTTTGTGTCGTCTCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAACCGTACGAGGAGGAGCTCAA CTGCATGGGAATGTTCAAGCGCGAAA GCAA  GCTGGT GGTGG GCACGTCCAAGGGCAATTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTACCGATCACGGAGCAGATTGCCGTCATGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGGGTGCTCGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL BX611787             [                                                                                                                                                                                                                                                AT GGATGCGGAGACGGGCAAATTCAAGCGCTTCTGGGAATCGGCCCACGACGAGCCGGTCTACTCGATGACGGTGCTCGGGGAGCATCTGTTTGCGACCGGGGACGACGATGGTGAGGTGAAGCTGTGGGATGTGCGTGAGCGGAATGCGGTGTTTTCGCTCCGTCCGGTGGAGGACTTTGTGTCGTCCCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAACCGTACGAGGAGGAGCTCAA CTGCATGGGAATGTTCAAGCGCGAAA GCAA  GCTGGT GGTGG GCACGTCCAAGGGCAACTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTGCCGATTACGGAGCAGATTGCCGTCACGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGCGTGCTCGGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGGAGCGGCGAGCTGATCGCGTCCAGC                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL BX626516             [                                                                                                                                                                                                                                                                                                                                     CATCTGTTTGCGACCGGGGACGACGATGGTGAGGTGAAGCTGTGGGATGTGCGTGAGCGGAATGCGGTGTTTTCGCTCCGTCCGGTGGAGGACTTTGTGTCGTCCCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTATGTCCAATCAGAACCGTACGAGGAGGAGCTCAA CTGCATGGGAATGTTCAAGCGCGAAA GCAA  GCTGGT GGTGG GCACGTCCAAGGGCAACTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTGCCGATTACGGAGCAGATTGCCGTCATGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGCGTGCTCGGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGGAGCGGCGAGCTGATCGCGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAACGTGAAGTACTTCGAGGACTTTGACGGCATCAAGTACAACAGCAAGCCGGACAAGCGTATGCTAANGNACAATCTGCCGTCGTCGCAGCGCA                                                                                                                                                                                                                                                                                     ]
[+] EMBL BM579221             [                                                                                                                                                                                                                                                                                                                                                                                                                           ccgGGACTTTGTGTCGTCTCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAACCGTACGAGGAGGAGCTCAA CTGCATGGGAATGTTCAAGCGCGAAA GCAA  GCTGGT GGTGG GCACGTCCAAGGGCAATTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTACCGATCACGGAGCAGATTGCCGTCATGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGGGTGCTCGGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGTGGGAGCGGCGAGCTGATCGCGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAATGTGAAGTACTTCGAGGACTTTGACGGCATCAAGTACAACAGCAAGCCGGACAAGCGCATGCTGAGGCACAATCTGCCCTCGTCGCAGCGCACCAATGCGAAGGATTTCTTCGCCGGGCTGGGCGACGATGAGTAGCGGCCACGCGGGGCAGACGTAGCGTGACAAGCACAGGGGAAGGCAGGGGGGAGAAAGTTCTTTATTT                                                                                                                                                                      ]
[-] EMBL CNS09CDO             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ACGAGTGGAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAACCGTACGAGGAGGAGCTCAA CTGCATGGGAATGTTCAAGCGCGAAA GCAA  GCTGGT GGTGG GCACGTCCAAGGGCAATTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTACCGATCACGGAGCAGATTGCCGTCATGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGGGTGCTCGGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGACGCGGCGAGCTGATCGCGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAATGTGAAGTACTTCGAGGACTTTGACGGCATCAAGTACAACAGCAAGCCGGACAAGCGCATGCTGAGGCACAATCTGCCCTCGTCGCAGCGCACCAATGCGAAGGATTTCTTCGCCGGGCTGGGCGACGATGAGTAGCGGCCACGCGGGGCAGACGTAGCGTGACAAGCACA GGGAAGGCA GGGGGAGAAAGTTCTTTATTTTACATTAAGGTAATATTTTGTGTAATAACGTTTTGCGTACTAAAAGCCAGCCCGAAAGGGCCCGTGTTACGCGTTTGCGGATCGGAATTGTGGTACGGAATCAGGAGATAAAATGCGATAAAAATG                                        ]
[+] EMBL BX623701             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 CGACGCATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTGCCGATTACGGAGCAGATTGCCGTCATGGCGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGCGTGCTCGGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGGAGCGGCGAGCTGATCGCGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAACGTGAAGTACTTCGAGGACTTTGACGGCATCAAGTACAACAGCAAGCCGGACAAGCGTATGCTAAGGCACAATCTGCCGTCGTCGCAGCGCACCAATGCGAAGGATTTCTTCGCCGGGCTGGGCGACGATGAGTAGCGGCCACGC GAGCAGCCGTAGCGTGACAAGCACA GGGAAGGCA GGGGGAGAAAGTTCTTTATTTTACATTAAGGTAATATTTTGTGTAATAACGTTTTGCGTGCTAAAAGCCAGCCCGAAAGGGCCCGTGTTACGCGTTTGCGGATCGGAATTGTGGTACGGAATCAGGAGATAAAATGCGATAAAATTGTTAAGCGATGAAAATAAAAATGTATTTTACCTTCCTCCAC]
[-] EMBL BX611786             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             GGGCGACGATGAGTAGCGGCCACGC GAGCAGCCGTAGCGTGACAAGCACA GGGAAGGCA GGGGGAGAAAGTTCTTTATTTTACATTAAGGTAATATTTTGTGTAATAACGTTTTGCGTGCTAAAAGCCAGCCCGAAAGGGCCCGTGTTACGCGTTTGCGGATCGGAATTGTGGTACGGAATCAGGAGATAAAATGCGATAAAATTGTTAAGCGATGAAAATAAAAATGTATTTTACC         ]


>consensus_9148#0 GGCAGAATCNGGCACGATNGCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGT GCGAGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTACCGGTACGCGA ACGACGCGAACGTGCTGGCGGCCACGCACGAGCTGCACACGAAAGCGATCCGCTGCGTGG AGTTCGTGCCCGATGGGAAGTCGCTCATCTCGACCGGGCGCGAGCGGTCGATCGTGGTGA TGGATGCGGAGACGGGCAAATTCAAGCGCTTCTGGGAATCGGCCCACGACGAGCCGGTCT ACTCGATGACGGTGCTCGGGGAGCATCTGTTTGCGACCGGGGACGACGATGGTGAGGTGA AGCTGTGGGATGTGCGTGAGCGGAATGCGGTGTTTTCGCTCCGTCCGGTGGAGGACTTTG TGTCGTCCCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTGGAGACG GTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAACCGTACG AGGAGGAGCTCAACTGCATGGGAATGTTCAAGCGCGAAAGCAAGCTGGTGGTGGGCACGT CCAAGGGCAATTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACGCATTTA CCGGGCCGTCGGCGAGCGCCAACCGCATGGTACCGATCACGGAGCAGATTGCCGTCATGG CGGGCGAGGACGGCATCCTCCGGGCGATGCACATGGTGCCGGGGCGGGTGCTCGGCATCG TCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGGAGCGGCGAGCTGATCG CGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAACGTGAAGTACTTCGAGGACTTTG ACGGCATCAAGTACAACAGCAAGCCGGACAAGCGTATGCTAAGGCACAATCTGCCGTCGT CGCAGCGCACCAATGCGAAGGATTTCTTCGCCGGGCTGGGCGACGATGAGTAGCGGCCAC GCGGGGCAGACGTAGCGTGACAAGCACAGGGAAGGCAGGGGGAGAAAGTTCTTTATTTTA CATTAAGGTAATATTTTGTGTAATAACGTTTTGCGTGCTAAAAGCCAGCCCGAAAGGGCC CGTGTTACGCGTTTGCGGATCGGAATTGTGGTACGGAATCAGGAGATAAAATGCGATAAA ATTGTTAAGCGATGAAAATAAAAATGTATTTTACCTTCCTCCAC



consensusID : consensus_9148#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 778
fasta sequence
                              [GTCATAACAAAAGTTTGCCTCCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTG-ATTCAG-ACGACAGCG-AAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGATGACAG-CCAGATGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGC-GGCAAAC-GGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACA-TCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTACCGGTACGCGAACGACGCGAACGTGCTGGCGGCCACGCA]

[+] EMBL CNS09CDN             [GTCATAACAAAAGTTTGCCTCCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAAAATGCGT  CAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTGCATTCAGCACGACAGCGCAAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCATTGACA CAATGACACGTACGAGGTGGAGGATGACAGCCCAGATGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGCGGGCAAACGGGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACA TCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTACCGGTACGCGAACGACGCGAACGTGCTGGCGGCCACGCA]
[+] EMBL BM623867             [                             ccGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTG ATTCAG ACGACAGCG AAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGATGACAG CCAGATGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGC GGCAAAC GGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACA TCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACATACTGGCGGTTG                                                                   ]
[+] EMBL BX623130             [                                                  ATAAAGAAAAACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGTGCAATCAAAAGCATTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTTGCAGTTGCCTAATTTTGTGTGTGCCTCCACTCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTG ATTCAG ACGACAGCG AAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGACGACAG CCAGATGTCCGACTCAAGCCTAGACTCCGACTCAGACGGGCAGGCGGAGGAAGATGC GGCGAAC GGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCGCGCTCGAAGCCGCCAGACATTCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGG                                                                                  ]
[+] EMBL BM618563             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccGGACATGGAGGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACA TCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACA                                                                               ]


>consensus_9148#1 GTCATAACAAAAGTTTGCCTCCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAA ACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAG TTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCAC GCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAGAAG AGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGC TGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGC CAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGATGACAGCCAGA TGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGCGGCAAACG GCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAG CGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGAGGACGAGGTGATAA AGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACATCCAGACGGAGG ACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGAGGACATACTGGCGGTTGGTACGTCGG TGGGCGATGTGCTGATGTACCGGTACGCGAACGACGCGAACGTGCTGGCGGCCACGCA



consensusID : consensus_9148#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 688
fasta sequence
                              [CCGCGGACGCGTGGGCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGATGACAGCCAGATGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGCGGCAAACGGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGA-GGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACATCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGA]

[+] EMBL BM643031             [CCGCGGACGCGTGGGCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGATGACAGCCAGATGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGCGGCAAACGGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGA GGAGGACGAGGTGATAAAGGCGATCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACATCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGTGCGA]
[+] EMBL BM575713             [            ccGCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAAAATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCCTTCAGTTTCTCCGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTGGAATGAGGAATTTTCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAGAAGAGGAAGAAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACGCCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGACGACAGCCAGATGTCCGACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGCGGCGAACGGCAACAAGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGGAGGACGAGGTGATAAAGGCGATCATTTCGGAGA                                                                            ]


>consensus_9148#2 CCGCGGACGCGTGGGCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAA AATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGCGCAATCAAAAGCATTCAGTTTCTC CGTGAATTCTCCGTTTTGTGTTTAGCAGTTGCCTAATTTTGTGTGTGCCTCCACGCGGTG GAATGAGGAATTTTCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAGAAGAGGAAG AAATCGATCTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCGAGGGGCTGGTAG AGTATCTGTCCGAGGGGGAAGACGTATCCGCGCCGGCCGAATCGTTCGACATGCCAAACG CCGACGAGAGCAGCGACAGCGATGACACGTACGAGGTGGAGGATGACAGCCAGATGTCCG ACTCAAGCCTAGACTCGGACTCGGACGGGCAGGCGGAGGAAGATGCGGCAAACGGCAACA AGCCCGGAGCGGCACAGGCGTCCACCTCGAACGGCGAGGGCACGGCGGAGGAAGCGCCCG CCCGCCGTGTGATTGACGATTACGACGAGGACATGGAGGAGGACGAGGTGATAAAGGCGA TCATCTCGGAGATCAAGAAACCACGCTCGAAGCCGCCAGACATCCAGACGGAGGACTTTG TGGTGGATCTGTCGTTCCATCCGTGCGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9148#1      ------------------------------------------------------GTCATA 6
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      GGCAGAATCNGGCACGATNGCAGACGGAGGACTTTGTGGTGGATCTGTCGTTCCATCCGT 60
                                                                                  

consensus_9148#1      ACAAAAGTTTGCCTCCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAA 66
consensus_9148#2      CCGCGGACGCGTGGGCGCGGAATGTGTGCCGCGCTTGCACGTTGATAAAGAAAAACAGAA 60
consensus_9148#0      GCGAGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTACCGGTACGCGA 120
                       *             **     *  **     *       * ****  *     **   *

consensus_9148#1      AATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGC-GCAATCAAAAGCATTCAGTTTCT 125
consensus_9148#2      AATGCGTAGCAGCCATTACGGGGGCTGTTATTGAGC-GCAATCAAAAGCATTCAGTTTCT 119
consensus_9148#0      A---CGACGCGAACGTGCTGGCGGCCACGCACGAGCTGCACACGAAAGCGATCCG---CT 174
                      *   **  **   * *   ** ***       **** ***  * *****  ** *   **

consensus_9148#1      CCGTGAATTCTCCGTTTTGTGTTTAGCAGTTG--CCTAATTTTGTGTGTGCCTCCA--CG 181
consensus_9148#2      CCGTGAATTCTCCGTTTTGTGTTTAGCAGTTG--CCTAATTTTGTGTGTGCCTCCA--CG 175
consensus_9148#0      GCGTGGAGTTCGTGCCCGATGGGAAGTCGCTCATCTCGACCGGGCGCGAGCGGTCGATCG 234
                       **** * *    *     **   **  * *   *   *    * * * **   *   **

consensus_9148#1      CGGTG--GAATGAGGAATTT--TCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAG 237
consensus_9148#2      CGGTG--GAATGAGGAATTT--TCAATCGCCCTACTTCCGTGATTCAGACGACAGCGAAG 231
consensus_9148#0      TGGTGATGGATGCGGAGACGGGCAAATTCAAGCGCTTCTGGGAATCGGCCCACGACGAGC 294
                       ****  * *** ***        ***       **** * ** ** * * **  ***  

consensus_9148#1      AAGAGGAAGAAAT--CGAT-CTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCG 294
consensus_9148#2      AAGAGGAAGAAAT--CGAT-CTCGCACCGTACATTTTGGCAGTGCGCCCCGACGAGCTCG 288
consensus_9148#0      CGGTCTACTCGATGACGGTGCTCGGGGAGCATCTGTTTGCGACCGGGGACGACGATGGTG 354
                        *   *    **  ** * ****    * *  * ** **     *   ******    *

consensus_9148#1      AGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAG--ACGTATCCGCGCCGGCCGA------ 346
consensus_9148#2      AGGGGCTGGTAGAGTATCTGTCCGAGGGGGAAG--ACGTATCCGCGCCGGCCGA------ 340
consensus_9148#0      AGGTGAAGCTGTGGGATGTGCGTGAGCGGAATGCGGTGTTTTCGCTCCGTCCGGTGGAGG 414
                      *** *  * *   * ** **   *** ** * *    ** * *** *** ***       

consensus_9148#1      ATCGTTCGACATGCCAAACGCCGA--CGAGAGCAGCGACAGCGATGACACGTACGAGGTG 404
consensus_9148#2      ATCGTTCGACATGCCAAACGCCGA--CGAGAGCAGCGACAGCGATGACACGTACGAGGTG 398
consensus_9148#0      ACTTTGTGTCGTCCCTGCTGGCGAACCAGCATCAGCAAAAGTACCTTCTGCTGACGAGTG 474
                      *   *  * * * **    * ***  *   * **** * **      *   *     ***

consensus_9148#1      GAGG----------ATGACAGCCAGA--TGTCCGACTCAAG-----CCTAGACTCGGACT 447
consensus_9148#2      GAGG----------ATGACAGCCAGA--TGTCCGACTCAAG-----CCTAGACTCGGACT 441
consensus_9148#0      GAGACGGTTTGCTCACGACAATTAACATTGCGCAACGCAAAATGTACGTCCAATCAGAAC 534
                      ***           * ****   *    **  * ** ***      * *  * ** **  

consensus_9148#1      CGGACGGGCAGGCGGAGGAAGATGCGGCAAACGGCAACAAGCCCGGAGCGGCACAGGCGT 507
consensus_9148#2      CGGACGGGCAGGCGGAGGAAGATGCGGCAAACGGCAACAAGCCCGGAGCGGCACAGGCGT 501
consensus_9148#0      CGTACGAGGAGGAGCTCAACTGCATGGGAATGTTCAAGCGCGAAAGCAAGCTGGTGGTGG 594
                      ** *** * *** *    *      ** **    ***        *   *     ** * 

consensus_9148#1      CCACCTCGAACGGCGAGGGC-ACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGAT 566
consensus_9148#2      CCACCTCGAACGGCGAGGGC-ACGGCGGAGGAAGCGCCCGCCCGCCGTGTGATTGACGAT 560
consensus_9148#0      GCACGTCCAAGGGCAATTACTACACCTACAACTGGGGCCAGTTTGCGTACCACTGCGACG 654
                       *** ** ** *** *   * **  *       * * **      ***   * **     

consensus_9148#1      TACG-ACGAGGACATGGAGGAGGACGAGGTG-ATAAAGGCGATCATCTCGGAGATCAA-G 623
consensus_9148#2      TACG-ACGAGGACATGGAGGAGGACGAGGTG-ATAAAGGCGATCATCTCGGAGATCAA-G 617
consensus_9148#0      CATTTACCGGGCCGTCGGCGAGCGCCAACCGCATGGTACCGATCACGGAGCAGATTGCCG 714
                       *   **  ** * * *  ***  * *   * **     ******    * ****    *

consensus_9148#1      AAACCACGCTCGAAGCCGCCAGACATCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTC 683
consensus_9148#2      AAACCACGCTCGAAGCCGCCAGACATCCAGACGGAGGACTTTGTGGTGGATCTGTCGTTC 677
consensus_9148#0      TCATGGCGGGCGAGGACGGCAT-CCTCCGGGCGATGCACATGGTGCCGGGGCGGGTGCTC 773
                        *   **  *** * ** **  * *** * **  * ** * ***  **  * *  * **

consensus_9148#1      --CATCCGTGCG-AGGACATACTGGCGGTTGGTACGTCGGTGGGCGATGTGCTGATGTAC 740
consensus_9148#2      --CATCCGTGCG-A---------------------------------------------- 688
consensus_9148#0      GGCATCGTCGGGCAGCACTCGATGGCGGTGGACACGCTGGACATTAGCGGGAGCGGCGAG 833
                        ****   * * *                                              

consensus_9148#1      CGGTACGCGAACGACGCGAACG-TGCTGGCGGCCACGCA--------------------- 778
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      CTGATCGCGTCCAGCTCGCACGACAACGATGTGCGCTTCTGGAACGTGAAGTACTTCGAG 893
                                                                                  

consensus_9148#1      ------------------------------------------------------------
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      GACTTTGACGGCATCAAGTACAACAGCAAGCCGGACAAGCGTATGCTAAGGCACAATCTG 953
                                                                                  

consensus_9148#1      ------------------------------------------------------------
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      CCGTCGTCGCAGCGCACCAATGCGAAGGATTTCTTCGCCGGGCTGGGCGACGATGAGTAG 1013
                                                                                  

consensus_9148#1      ------------------------------------------------------------
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      CGGCCACGCGGGGCAGACGTAGCGTGACAAGCACAGGGAAGGCAGGGGGAGAAAGTTCTT 1073
                                                                                  

consensus_9148#1      ------------------------------------------------------------
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      TATTTTACATTAAGGTAATATTTTGTGTAATAACGTTTTGCGTGCTAAAAGCCAGCCCGA 1133
                                                                                  

consensus_9148#1      ------------------------------------------------------------
consensus_9148#2      ------------------------------------------------------------
consensus_9148#0      AAGGGCCCGTGTTACGCGTTTGCGGATCGGAATTGTGGTACGGAATCAGGAGATAAAATG 1193
                                                                                  

consensus_9148#1      ---------------------------------------------------
consensus_9148#2      ---------------------------------------------------
consensus_9148#0      CGATAAAATTGTTAAGCGATGAAAATAAAAATGTATTTTACCTTCCTCCAC 1244
                                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)