These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9168#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1920 fasta sequence [GATGTACTGATAGAGCTG-GTGAACGACTCCATCTACGAGTGG-ACATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC----ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA---TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT--AAAAAAAATGCACATGT-GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT-GAACAGCAAAAAAAAAAAAAAATGTAAAATTGACTTTAGTGCAGCAAAATAGGGGTACAACTAGTTTAATGTCGACCACACGACGACATGTGGTCGAAATACTGATCGGTGATACAACACGCGTTGAGCAGGAATGTGGTATGAATGGAGCTCCATTGAATTGTTGTTCCTTCAATATTTTCATTCATAGCAAACCCGAAGATCGGTAGCAATGGTTCGTCCTTTTCTCTGAATGGACACAAAGGGGCAGGGGAAAAATTCAAAATGATTCAAAGCTTCTCCTCCCACTTCCGCCAACAATCATAAGCTGAGCTGCCGATCACACCAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGCTTTTCATTCTGATTTCTTTCTGTA] [+] EMBL CNS0944K [GATGTACTGATAGAGCTG GTGAACGACTCCATCTACGAGTGGAACATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCGTGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGT AACGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGA ] [+] EMBL CNS09FMP [ CTGTGTGAACGACTCCATCTACGAGTGG AAATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTG ] [+] EMBL CNS09I1J [ G GTGAACGACTCCATCTACGAGTGG ACATCCGCCTCATGTCGGTCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGGACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGCGTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGGAGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTTA CGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAA ] [+] EMBL BM615601 [ ccgGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGC ] [-] EMBL CNS09I1K [ TTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAAAACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT AAAAAAAATGCACATGT GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT ] [-] EMBL CNS0944L [ CAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTGCGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT AAAAAAAATGCACATGT GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT GAACAGCAAAAAA ] [+] EMBL BM592482 [ ccgGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCGAGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAAT TGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGAATGCGCGTGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCACAGAGAGAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAAT ] [-] EMBL CNS09FMQ [ GTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGTTGGTAGAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACCCACACAGCAGTGAAAGA TCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACT AAAAAAAATGCACATGT GCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACATGCAGAATATTAAAACACATCTT GGAAACCCAAAAAAAAAAAAAA ] [+] EMBL BM590459 [ ccgGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTCGGAAAGATCGTATGCGCGTGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTAGAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCAC ACAGAGAGAGAAACGCTTGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTGTTTGAGAATTCGTTTCAGAAAGAAGGATTTAGAAAAGGGAGAGAAAGA GAGTGTTAGTAGAGCACATTTTCAACCTTTTGTTCATATACTATCTACACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACA CACACAGCAGTGAAAGATCTTCTTCTTATCATAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAACAGTTCTGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACGTACAGAAT ] [+] EMBL BX612286 [ tcATAACACTTATGTTTATTCTTTGTACTGTAATTCCCTACCTGACTCTGCACTGAAGGTGTGAACTACGTGCAGAATATTAAAACACATCTTGGAACCGTACTAGAAGCTCATGTTGTAAAATTGACTTTAGTGCAGCAAAATAGGGGTACAACTAGTTTAATGTCGACCACACGACGACATGTGGTCGAAATACTGATCGGTGATACAACACGCGTTGAGCAGGAATGTGGTATGAATGGAGCTCCATTGAATTGTTGTTCCTTCAATATTTTCATTCATAGCAAACCCGAAGATCGGTAGCAATGGTTCGTCCTTTTCTCTGAATGGACACAAAGGGGCAGGGGAAAAATTCAAAATGATTCAAAGCTTCTCCTCCCACTTCCGCCAACAATCATAAGCTGAGCTGCCGATCACACCAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGCTTTTCATTCTGATTTCTTTCTGTA] consensusID : consensus_9168#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 665 fasta sequence [CCGGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCAGCAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTCTGGACGCTACACTGTAGCAAAGATCTTCATCGTACATCACCAGAGATCATCCATTCCCCAAACTCTCTCGCTCTCTCTCTCGTTCTTTGTCTTTGTTTGTGCCATCCGACGAATCGATCTCGCTACGATTACAGCGCATTCGATTATGGATTAAATACAAACGATGGCAGCGAGTTTAGAGATACATGCGAGCGTTTTCTTGTTGGAATGAATGCGAATGGTGATAGAGACCGGGAAATCGATCGAGGAACATAACAACAACCAAAAGGGTATTAGTGTGTGTGTCCCGGTCTTTTCCACTAGCAGCAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTT] [+] EMBL BM653685 [CCGGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGCTTAGCTAGAGCGCAGCAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGGATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAAGAGGGGAGGGCAAACGCCGTTCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTCTGGACGCTACACTGTAGCAAAGATCTTCATCGTACATCACCAGAGATCATCCATTCCCCAAACTCTCTCGCTCTCTCTCTCGTTCTTTGTCTTTGTTTGTGCCATCCGACGAATCGATCTCGCTACGATTACAGCGCATTCGATTATGGATTAAATACAAACGATGGCAGCGAGTTTAGAGATACATGCGAGCGTTTTCTTGTTGGAATGAATGCGAATGGTGATAGAGACCGGGAAATCGATCGAGGAACATAACAACAACCAAAAGGGTATTAGTGTGTGTGTCCCGGTCTTTTCCACTAGCAGCAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTCTTCTAACAATAATCGTTCGTT] consensusID : consensus_9168#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 565 fasta sequence [CAGAGCAGAATCGCACGAGGTGCGCACAATCATAAGCTGAGCTGCCGATCACACCAAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGGCTTTTCATTCTGTTTGCTTTCTGTAGACGAGCATATGAGAATGGAAACTAAAACACGAGCGCGCTCAACATCATCTGTCGATTCGTTAAATGGAAATACACAATTTGAATGGGATTCAATACGGTGTATGCTATGGTTTGTTAGTTTTTTCGCTCAAAACCCGAACCGAACAATGAAACACAAACACACTCACANAGCTCAACGTTNTAGAAACTCAAAATAGCNAGTCAAAGCAAAGTGCACTCTAGGAGAATAGCGATGATGCATGGCTCTGCATGCGTGCGTGCGTGCGTGCGTGC] [+] EMBL BX469766 [CAGAGCAGAATCGCACGAGGTGCGCACAATCATAAGCTGAGCTGCCGATCACACCAAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGGCTTTTCATTCTGTTTGCTTTCTGTAGACGAGCATATGAGAATGGAAACTAAAACACGAGCGCGCTCAACATCATCTGTCGATTCGTTAAATGGAAATACACAATTTGAATGGGATTCAATACGGTGTATGCTATGGTTTGTTAGTTTTTTCGCTCAAAACCCGAACCGAACAATGAAACACAAACACACTCACANAGCTCAACGTTNTAGAAACTCAAAATAGCNAGTCAAAGCAAAGTGCACTCTAGGAGAATAGCGATGATGCATGGCTCTGCATGCGTGCGTGCGTGCGTGCGTGC] consensusID : consensus_9168#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 378 fasta sequence [TAGAAAAGGGAGAGAAAGAGAGTGTTAGNATGAGCACATTTTCNACCTTTTGTTCATATACTATCTACACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACACAGCANGGAAAGATCTTCTTCTTATCATAANGTATATTTTAAACCANCATCTCCTATANTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAACNGNTCTGTTTATTCTTTGTACTGTNATTCCCTACCTGACTCTGCACTGAAGGNGTGAACTACGTACAGAATATTANAACACATCTTGGAACCGCA] [+] EMBL BX624939 [TAGAAAAGGGAGAGAAAGAGAGTGTTAGNATGAGCACATTTTCNACCTTTTGTTCATATACTATCTACACAACCAAACACCATTCAATATTCAGCACCGCCGTACACACAACAATCACAACACACACACACAGCANGGAAAGATCTTCTTCTTATCATAANGTATATTTTAAACCANCATCTCCTATANTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAACNGNTCTGTTTATTCTTTGTACTGTNATTCCCTACCTGACTCTGCACTGAAGGNGTGAACTACGTACAGAATATTANAACACATCTTGGAACCGCA] [+] EMBL BX603756 [ TACACACAACAATCACAACACACACACACAGCAGTGAAAGATCTTCTTCTTATCCTAAAGTATATTTTAAACCAGCATCTCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGGCGGAAGATACCGATCGGCACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATA ] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9168#0 GATGTACTGATAGAGCTGGTGAACGACTCCATCTACGAGTGGACATCCGCCTCATGTCGG 60 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TCGACCCGGACAGCCCGCTGCACAACGATCTGGTCCTGCTGAAGGAGCGCGAAGGCAAGG 120 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 ACAGCATACTGCTGAACATCATTTTCAAGGAGACGTACCCGTTCGAGCCACCGTTTGTGC 180 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 GTGTTGTGCATCCAATCATATCCGGTGGTTACGTACTGGTCGGTGGTGCCATCTGCATGG 240 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 AGCTGCTCACGAAGCAAGGCTGGAGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAA 300 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TAGCGGCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGT 360 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 ACAGCTTAGCTAGAGCGCACAAAGTTTCAAATCGCTCGTGCAAATCCACGAAAAGAACGG 420 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 ATGGTTTACACCCCCCAAGGAGGATGGTTAAGAGTTGGGAGAGGGGAGGGCAAACGCCGT 480 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TCCACGATGCTGTTGCAGCGCTTCGCTTCCGTGCTCTGTTGTTGATGCTGTAGTGTAGTA 540 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 GTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGGCATCGCGCTAGTTC 600 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TTCTAACAATAATCGTTCGTTCTTTAAGCTTTTAGGTTCCTAGACTTAAGTGTAGATGCG 660 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 AGTACGAATGGAGATGGGATGGTTCTGGAGCGATACGGATGAATGCGTCTATCAAAATTG 720 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 CGTGCGTGCGTGCGTGCGTGCGTGAGCGTGCTTGTGTTATGTTTGTGTGTAGAAAACTTC 780 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 GGAAAGATCGTATGCGCGAGAATGGGGTAAAAACACTCTCGAAAGCAAAAGGGATCGGTA 840 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 GAGTGGGCTAGTAACGTATGGGGGAAGTCGGGGGATAGCTGCAGAACTTCACACAGAGAG 900 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 AGAAACGCTGGAAGAAGCCACTTTAAATAAGCTTAGTAAATAGGAAATGGTGAGATACTG 960 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 -----------------------------CAGAGCAGAATCGCACGAGGTGCGCACAATC 31 consensus_9168#1 ----------------CCGGCTCGGCTTACACCGTGGAGGCGGTCATCATGCAAATAGCG 44 consensus_9168#0 TTTGAGAATTCGTTTCAGAAAGA-AGGATTTAGAAAAGGGAGAGAAAGAGAGCGGAGTGT 1019 consensus_9168#3 ------------------------------TAGAAAAGGGAGAGAAAGAGAG-----TGT 25 consensus_9168#2 ATAAGCTGAGCTGCCGATCACAC-CAAGTATAGACTGAAAGGAGGAAGTGTGCGCTTTGC 90 consensus_9168#1 GCCACACTAGTCAAGGGCAAGGCGCGAATACAGTTCGGACCCACCAAGGGCCAGTACAGC 104 ** * *** * * consensus_9168#0 TA---------GTA-GAGCACATTTTCAACCTTTTGTTCGTACACTATCTATACAACCAA 1069 consensus_9168#3 TA---------GNATGAGCACATTTTCNACCTTTTGTTCATATACTATCTACACAACCAA 76 consensus_9168#2 TGTGTTCTCCGGTGTGGTGGAACGTTACGTTTGCCGTGTACATGTGGAGCTCTTCAACGA 150 consensus_9168#1 TTAG--CTAGAGCGCAGCAAAGTTTCAAATCGCTCGTGCAAATCC--ACGAAAAGAACGG 160 * * * ** * * * consensus_9168#0 ACACCATTCAA-TATTCA----GCACCGCCGTACACACAACAAT---CACAACACACACA 1121 consensus_9168#3 ACACCATTCAA-TATTCA----GCACCGCCGTACACACAACAAT---CACAACACACACA 128 consensus_9168#2 ATATCTTCCATCTGTTTGCCGTGCGCAATCTCACGATCGATAAAG--CGAGTCAAGAGAA 208 consensus_9168#1 ATGGTTTACAC-CCCCCAAGGAGGATGGTTAAGAGTTGGGAAGAGGGGAGGGCAAACGCC 219 * * ** * * ** consensus_9168#0 CCCACACAGCAGTGAAAGATCTTCTT----ATCATAAAGTATATTTTAAACCAGC--ATC 1175 consensus_9168#3 ----CACAGCANGGAAAGATCTTCTTCT-TATCATAANGTATATTTTAAACCANC--ATC 181 consensus_9168#2 GTCTGTCGGCCGGATCAGACAGACCTAAATGCAACGAATTATAGTTTGTTTTACCTGGCT 268 consensus_9168#1 GTTCCACGATGCTGTTGCAGCG-CTTCGCTTCCGTGCTCTGTTGTTGATGCTGTCT-GGA 277 * * * * * * ** * consensus_9168#0 TCCTATAGTAGGGAAGTGAAATGGATAGGAATTCGGG--CGGAAGATACCGATCG---GC 1230 consensus_9168#3 TCCTATANTAGGGAAGTGAAATGGATAGGAATTCGGG--CGGAAGATACCGATCG---GC 236 consensus_9168#2 TTTCATTCTGTTTGCTTTCTGTAGACGAGCATATGAGAATGGAAACTAAAACACGAGCGC 328 consensus_9168#1 CGCTACACTGTAGCAAAGATCTTCATC-GTACATCACCAGAGATCATCCATTCCCCAAAC 336 * * * * * * ** * * * consensus_9168#0 ACTAAAAAAAA--TGCACATGTG-CATACAGACGGGCATTCTATAA--------CAGTTC 1279 consensus_9168#3 ACTAAAAAAAAAATGCGCATGTGGCATACAGACGGGCATTCTATAA--------CNGNTC 288 consensus_9168#2 GCTCAACATCATCTGTCGATTCGTTAAATGGAAATACACAATTTGAATGGGATTCAATAC 388 consensus_9168#1 TCTCTCGCTCTCTCTCTCGTTCTTTGTCTTTGTTTGTGCCATCCGAC---GAATCGATCT 393 ** * * * * consensus_9168#0 TGTTTATTCTTTGTACTGTAATTCCCTAC---CTGACTCTGCACTGAAGGTGTGAACT-A 1335 consensus_9168#3 TGTTTATTCTTTGTACTGTNATTCCCTAC---CTGACTCTGCACTGAAGGNGTGAACT-A 344 consensus_9168#2 GGTGTATGCTATGGTTTGTTAGTTTTTTCGCTCAAAACCCGAACCGAACAA-TGAAAC-A 446 consensus_9168#1 CGCTACGATTACAGCGCATTCGATTATGGA--TTAAATACAAACGATGGCAGCGAGTTTA 451 * * * * * ** ** * consensus_9168#0 CATGCAGAATATTAAAAC---ACATCTTG-AACAGCAAAAAAAAAAAAAAATGTAA-AAT 1390 consensus_9168#3 CGTACAGAATATTANAAC---ACATCTTGGAACCGCA----------------------- 378 consensus_9168#2 CAAACACACTCACANAGCTCAACGTTNTAGAAACTCAAAATAGCNAGTCAAAGCAA-AGT 505 consensus_9168#1 GAGATACATGCGAGCGTTTTCTTGTTGGAATGAATGCGAATGGTGATAGAGACCGGGAAA 511 * * * consensus_9168#0 TGACTTTAGTGCAGCAAAATAGGGGTACAACTAGTTTAATGTCGACCACACGACGACATG 1450 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 GCACTCTAGGAGAATAGCGATGATGCATGGCTCTGCATGCGTGCGTGCGTGCGTGCGTGC 565 consensus_9168#1 TCGATCGAGGAACATAACAACAAC-CAAAAGGGTATTAGTGTGTGTGTCCCGGTCTTTTC 570 consensus_9168#0 TGGTCGAAATACTGATCGGTGATACAACACGCGTTGAGCAGGAATGTGGTATGAATGGAG 1510 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 CACTAGCAGCAGTAGTAGTGTCAGCGTCTTATAACAGTGAAACACGACCGAAAGCAACGG 630 consensus_9168#0 CTCCATTGAATTGTTGTTCCTTCAATATTTTCATTCATAGCAAACCCGAAGATCGGTAGC 1570 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 CATCGCGCTAGTTCTTCTAACAATAATCGTTCGTT------------------------- 665 consensus_9168#0 AATGGTTCGTCCTTTTCTCTGAATGGACACAAAGGGGCAGGGGAAAAATTCAAAATGATT 1630 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 CAAAGCTTCTCCTCCCACTTCCGCCAACAATCATAAGCTGAGCTGCCGATCACACCAGTA 1690 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TAGACTGAAAGGAGGAAGTGTGCGCTTTGCTGTGTTCTCCGGTGTGGTGGAACGTTACGT 1750 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TTGCCGTGTACATGTGGAGCTCTTCAACGAATATCTTCCATCTGTTTGCCGTGCGCAATC 1810 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 TCACGATCGATAAAGCGAGTCAAGAGAAGTCTGTCGGCCGGATCAGACAGACCTAAATGC 1870 consensus_9168#3 ------------------------------------------------------------ consensus_9168#2 ------------------------------------------------------------ consensus_9168#1 ------------------------------------------------------------ consensus_9168#0 AACGAATTATAGTTTGTTTTACCTGCTTTTCATTCTGATTTCTTTCTGTA 1920 consensus_9168#3 -------------------------------------------------- consensus_9168#2 -------------------------------------------------- consensus_9168#1 -------------------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||