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Anopheles gambiae
cluster # 9175 cluster # 9175       Sequences # 14       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9175#0 length = 1692 sequences # 9  
consensus_9175#1 length = 952 sequences # 4  
consensus_9175#2 length = 540 sequences # 1  

consensusID : consensus_9175#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 9
consensus length = 1692
fasta sequence
                              [CCGGCGGTCGGTCGAACAAAGCCAAACCTTGGGGAAGTTAAAAAAAAAAACGCACACAAAAAGGCACTGCAGCGACGAACAACTGTTTCCTTCCATATGGCAATGCATTCACAGTCTTGTAATGCCTTTTGGGTGAATCATTTTCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTTTGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAGCACAGTGTTCAGTTCACTCCTGCGGCTAGTCGGGTAGAGGTCACAGTCGTCAAATCCAATTGTAGCGGCAGTGTGTCCAGTCCGTTTTTGTTTGTTACGTGTACACATCTCACCTCGCAAGCAGAAGACGCGCCATATTCATCCCCGCGGCAGCTCAATCGAGAAAGCAACAGAATTTAAAAAAAAGTAATCTCAAACCGGTAAGGGCATCATCTCGGTTCCTTTGTTCCCCGCGCGGCCAGCCAGTGTGTGCGTCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGGTGGAGAAGGCCTGGAAAATTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAAAGCCAATGCAATTGTGATCACCTGTGTGTGTGCGTGTTAGAAGCTTGGAAAGATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACCACAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCCAAGCAAGCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGAGAAGGCGAAGGCCGAGGAGAAGAAGGAAGACCCACCGAAGGAGATGCGCGCCGTCGTGCTGACCGGTTTCGGTGGTTTCAAGAACGTGAAGATCCTGAAAAAGCCCGAACCGTCGCCCCAGGCCGGCGAGGTGCTGATCCGCGTCAAGGCATGTGGACTGAACTTCCAGGATCTGATGGTACGACTCGGTGCGATCGATTCGCCGCCAAAAACTCCTACCATCCTCGGTTTCGAGTGTGCCGGCGAGATTGAAGCCGTCGGTGAAGAGGTCGAAGGATTCAAGGTTGGCGATCGTGTGGTGGCCCTGCCGGAATTCCGGGCCTGGTCCGAGCTGGTGGCCGTCCCGACCAAGTACGTCTATCACATTCCGGACGAGATGACATTCCAGGACGCGGCCGCCATCGTGATGAACTATCTGGTCGCCTACATTCTCATCTTCGATCTGGTGTCGCTGCGCGAGGGCAAGTCGATTCTGCTGCATTCCGTCGGCGGTGGTGTGGGTCAAGCCATCGTACAGCTGGCACGCACCGTGCCGAATGTAACCATTTTCGGTGTTTGCTCAAAGTCGAAGCACGAAGCGCTCGAGGC]

[+] EMBL BM578347             [CCGGCGGTCGGTCGAACAAAGCCAAACCTTGGGGAAGTTAAAAAAAAAAACGCACACAAAAAGGCACTGCAGCGACGAACAACTGTTTCCTTCCATATGGCAATGCATTCACAGTCTTGTAATGCCTTTTGGGTGAATCATTTTCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTTTGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAGCACAGTGTTCAGTTCACTCCTGCGGCTAGTCGGGTAGAGGTCACAGTCGTCAAATCCAATTGTAGCGGCAGTGTGTCCAGTCCGTTTTTGTTTGTTACGTGTACACATCTCACCTCGCAAGCAGAAGACGCGCCATATTCATCCCCGCGGCAGCTCAATCGAGAAAGCAACAGAATTTAAAAAAAAGTAATCTCAAACCGGTAAGGGCATCATCTCGGTTCCTTTGTTCCCCGCGCGGCCAGCCAGTGTGTGCGTCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGGTGGAGAAGGCCTGGAAAATTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAAAGCCAATGCAATTGTGATCACCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BM635096             [                                                                                                                                                          ccgGTCCGTGCGTCTCCGGCCATTTTTGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAGCACAGTGTTCAGTTCACTCCTGCGGCTAGTCGGGTAGAGGTCACAGTCGTCAAATCCAATTGTAGCGGCAGTGTGTCCAGTCCGTTTTTGTTTGTTACGTGTACACATCTCACCTCGCAAGCAGAAGACGCGCCATATTCATCCCCGCGGCAGCTCAATCGAGAAAGCAACAGAATTTAAAAAAAAGTAATCTCAAACCGGTAAGGG ATCATCTCGGTTCCTTTGTTCCCCGCGCGGCCAGCCAGTGTGTGCGTCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGGTGGAGAAGGCCTGGAAAATTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAAAGCCAATGCAATTGTGATCACCTGTGTGTGTGCGTGTTAGAAGCTTGGAAAGATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM657453             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CCGATGCAATTGTGATCACCTGTGTGTGTGCGTGTTAGAAGCTTGGAAAGATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACCACAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCCAAGCAAGCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCTGAGAACGGGCATGCCGAGGGTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGAGAAGGCGAAGGCCGAGGAGAAGAAGGAAGACCCACCGAAGGAGATGCGCGCCGTCGTGCTGACCGGTTTCGGTGGTTTCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AGA285024            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    CGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACCACAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCCAAGCAAGCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM616619             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgcccACGCGTCCGAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCCAAGCAAGCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL AGA281470            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CGAGAACGGGCATGCCGAGGGTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGAGAAGGCGAAGGCCGAGGAGAAGAAGGAAGACCCACCGAAGGAGATGCGCGCCGTCGTGCTGACCGGTTTCGGTGGTTTCAAGAACGTGAAGATCCTGAAAAAGCCCGAACCGTCGCCCCAGGCCGGCGAGGTGCTGATCCGCGTCAAGGCATGTGGACTGAACTTCCAGGATCTGATGGTACGACTCGGTGCGATCGATTCGCCGCCAAAAACTCCTACCATCCTCGGTTTCGAGTGTGCCGGCGAGATTGAAGCCGTCGGTGAAGAGGTCGAAGGATTCAAGGTTGGCGATCGTGTGGTGGCCCTGCCGGAATTCCGGGCCTGGTCCGAGCTGGTGGCCGTCCCGACCAAGTACGTCTATCACATTCCGGACGAGATGACATT                                                                                                                                                                                                            ]
[-] EMBL AGA280633            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               gtTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGGGAAGGCGAAGACCGAGGAGAAGAAGGAAGACCCACCGAAGGAGATGCGCGCCGTCGTGCTGACCGGTTTCGGTGGTTTCAAGAACGTGAGGATCCTGAAAAAGCCCGAACCGTCGCCCCAGGCCGGCGAGGTGCTGATCCGCGTCAAGGCATGTGGACTGAACTTCCAGGATCTGATGGTACGACTCGGTGCGATCGATTCGCCGCCAAAAACTCCTACCATCCTCGGTTTCGAGTGTGCCGGCGAGATTGAAGCCGTCGGTGAAGAGGTCGAAGGATTCAAGGTTGGCGATCGTGTGGTGGCCCTGCCGGAATTCCGGGCCTGGTCCGAGCTGGTGGCCGTCCCGACCAAGTACGTCTATCACATTCCGGACGAGATGACA                                                                                                                                                                                                              ]
[-] EMBL AGA283734            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGAGAAGGCGAAGGCCGAGGAGAAGAAGGAAGACCCACCGAAGGAGATGCGCGCCGTCGTGCTGACCGGTTTCGGTGGTTTCAAGAACGTGAAGATCCTGAAAAAGCCCGAACCGTCGCCCCAGGCCGGCGAGGTGCTGATCCGCGTCAAGGCATGTGGACTGAACTTCCAGGATCTGATGGTACGACTCGGTGCGATCGATTCGCCGCCAAAAACTCCTACCATCCTCGGTTTCGAGTGTGCCGGCGAGATTGAAGCCGTCGGTGAAGAGGTCGAAGGATTCAAGGTTGGCGATCGTGTGGTGGCCCTGCCGGAATTCCGGGCCTGGTCCGAGCTGGTGGCCGTCCCGACCAAGTACGTCTATCACATTCCGGACGAGATGACA                                                                                                                                                                                                              ]
[+] EMBL AL934527             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      gaatcgccCGAGG   TGATCCGCGTCACGGCATGTGGACTGAACTTCCAGGATCTGATGGTACGACTCGGTGCGATTGATTCGCCGCCAAAAACTCCTACCATTCTCGGTTTCGAGTGTGCCGGCGAGATTGAAGCCGTCGGTGAAGAGGTCGAAGGATTCAAGGTTGGCGATCGTGTGGTGGCCCTGCCGGAATTCCGGGCCTGGTCCGAGCTGGTGGCCGTCCCGACCAAGTACGTCTATCACATTCCGGACGAGATGACATTCCAGGACGCGGCCGCCATCGTGATGAACTATCTGGTCGCCTACATTCTCATCTTCGATCTGGTGTCGCTGCGCGAGGGCAAGTCGATTCTGCTGCATTCCGTCGGCGGTGGTGTGGGTCAAGCCATCGTACAGCTGGCACGCACCGTGCCGAATGTAACCATTTTCGGTGTTTGCTCAAAGTCGAAGCACGAAGCGCTCGAGGC]


>consensus_9175#0 CCGGCGGTCGGTCGAACAAAGCCAAACCTTGGGGAAGTTAAAAAAAAAAACGCACACAAA AAGGCACTGCAGCGACGAACAACTGTTTCCTTCCATATGGCAATGCATTCACAGTCTTGT AATGCCTTTTGGGTGAATCATTTTCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTT TGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAGCACAGTGTTCAGTTCACTCCTG CGGCTAGTCGGGTAGAGGTCACAGTCGTCAAATCCAATTGTAGCGGCAGTGTGTCCAGTC CGTTTTTGTTTGTTACGTGTACACATCTCACCTCGCAAGCAGAAGACGCGCCATATTCAT CCCCGCGGCAGCTCAATCGAGAAAGCAACAGAATTTAAAAAAAAGTAATCTCAAACCGGT AAGGGCATCATCTCGGTTCCTTTGTTCCCCGCGCGGCCAGCCAGTGTGTGCGTCACTCGA GAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGGTGGAGAAGGCCT GGAAAATTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAAAGCCAATGCAATT GTGATCACCTGTGTGTGTGCGTGTTAGAAGCTTGGAAAGATCCTCTCAACACATCAGTGT GCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTCCCCGTATC CGTAGTTCGGAGCGCAAAAAAAAAACGCACCACAAAACAGGAAGAAAAGCTGCACAAGTG TCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGC GCAGGATAAAAAAGAACAGCCAAGCAAGCCCCCCCGGCCCACGCGTGTACCTTTTCGCTA AGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGC ACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGC CGAGAACGGGCATGCCGAGGGTGGAGATGCCAAGACGGCAGTCGCCGGCGAAGAACAGAC CAACGGCGGTGCGACCCCGGACGAGAAGGCGAAGGCCGAGGAGAAGAAGGAAGACCCACC GAAGGAGATGCGCGCCGTCGTGCTGACCGGTTTCGGTGGTTTCAAGAACGTGAAGATCCT GAAAAAGCCCGAACCGTCGCCCCAGGCCGGCGAGGTGCTGATCCGCGTCAAGGCATGTGG ACTGAACTTCCAGGATCTGATGGTACGACTCGGTGCGATCGATTCGCCGCCAAAAACTCC TACCATCCTCGGTTTCGAGTGTGCCGGCGAGATTGAAGCCGTCGGTGAAGAGGTCGAAGG ATTCAAGGTTGGCGATCGTGTGGTGGCCCTGCCGGAATTCCGGGCCTGGTCCGAGCTGGT GGCCGTCCCGACCAAGTACGTCTATCACATTCCGGACGAGATGACATTCCAGGACGCGGC CGCCATCGTGATGAACTATCTGGTCGCCTACATTCTCATCTTCGATCTGGTGTCGCTGCG CGAGGGCAAGTCGATTCTGCTGCATTCCGTCGGCGGTGGTGTGGGTCAAGCCATCGTACA GCTGGCACGCACCGTGCCGAATGTAACCATTTTCGGTGTTTGCTCAAAGTCGAAGCACGA AGCGCTCGAGGC



consensusID : consensus_9175#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 952
fasta sequence
                              [CCGCCTTAGCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTTTGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAAAAGCCAGTGTTCAGTTCGCTCCTGCGGCTAGTCAGTAGAGGTCACAGTCAAATCGTAGCGGCAGTGTGTCCAATCCGTTCTTGTTTGTTACGTGTGTACACATCTCACCTCGCAAGCAGAAGCCGCGCCGTATTCATCCCCACGGCAAGCAAGCAACAGAATTAAAAAAAAATAATCCAAAACCGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGCTCGGCCAGCCAGTGTGTGCGTCACTCGACAGTGCGTGTTCTCGTTCTGTGTGCCCGCGTGTGTGTTTTAGTCTCCGGTGGAGAGGAAAGGCTGGAAAATTTGTAGTGCGAAGGAATTCAGCAAGCGAAACAGTGCTAAAAAGCTGTGCAATTGTGATCACCTGTGCGTGTGTGTGTGTGCGTGTTAGAAGCTTTGAAAGATCCTCTCAACACAGCAGTGTGCACGTGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTAGTTTCGGAGCACCAAAAAAAAACGCACCACAAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGTCTGTGGCCATCTTGCTCTGAAGGTATCCCCACCCGCTCCAGTGTGCGCAGGATAAAAAGAACAGCCAAGCAAGCCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGCTAAGACGGCAGCCGCCGCTACCAATGGCGATGCGACGGAGAGTGAGA]

[+] EMBL BM577699             [CCGCCTTAGCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTTTGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAAAAGCCAGTGTTCAGTTCGCTCCTGCGGCTAGTCAGTAGAGGTCACAGTCAAATCGTAGCGGCAGTGTGTCCAATCCGTTCTTGTTTGTTACGTGTGTACACATCTCACCTCGCAAGCAGAAGCCGCGCCGTATTCATCCCCACGGCAAGCAAGCAACAGAATTAAAAAAAAATAATCCAAAACCGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGCTCGGCCAGCCAGTGTGTGCGTCACTCGACAGTGCGTGTTCTCGTTCTGTGTGCCCGCGTGTGTGTTTTAGTCTCCGGTGGAGAGGAAAGGCTGGAAAATTTGTAGTGCGAAGGAATTCAGCAAGCGAAACAGTGCTAAAAAGCTGTGCAATTGTGATCACCTGTGCGTGTGTGTGTGTGCGTGTTAGAAGCTTTGAAAGATCCTCTCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BM602539             [                                                                                                           CGGCTAGTCAGTAGAGGTCACAGTCAAATCGTAGCGGCAGTGTGTCCAATCCGTTCTTGTTTGTTACGTGTGTACACATCTCACCTCGCAAGCAGAAGCCGCGCCGTATTCATCCCCACGGCAAGCAAGCAACAGAATTAAAAAAAAATAATCCAAAACCGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGCTCGGCCAGCCAGTGTGTGCGTCACTCGACAGTGCGTGTTCTCGTTCTGTGTGCCCGCGTGTGTGTTTTAGTCTCCGGTGGAGAGGAAAGGCTGGAAAATTTGTAGTGCGAAGGAATTCAGCAAGCGAAACAGTGCTAAAAAGCTGTGCAATTGTGATCACCTGTGCGTGTGTGTGTGTGCGTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM606880             [                                                                                                                                                                                                                                           ccgACAGAATTAAAAAAAAATAATCCAAAACCGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGCTCGGCCAGCCAGTGTGTGCGTCACTCGACAGTGCGTGTTCTCGTTCTGTGTGCCCGCGTGTGTGTTTTAGTCTCCGGTGGAGAGGAAAGGCTGGAAAATTTGTAGTGCGAAGGAATTCAGCAAGCGAAACAGTGCTAAAAAGCTGTGCAATTGTGATCACCTGTGCGTGTGTGTGTGTGCGTGTTAGAAGCTTTGAAAGATCCTCTCAACACAGCAGTGTGCACGTGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTAGTTTCGGAGCACCAAAAAAAAACGCACCACAAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGTCTGTGGCCATCTTGCTCTGAAGGTATCCCCACCCGCTCCAGTGTGCGCAGGATAAAAAGAACAGCCAAGCAAGCCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGC                                                                                                                                                     ]
[+] EMBL BM610225             [                                                                                                                                                                                                                                                                                                                                                                               ccgGTCTCCGGTGGAGAGGAAAGGCTGGAAAATTTGTAGTGCGAAGGAATTCAGCAAGCGAAACAGTGCTAAAAAGCTGTGCAATTGTGATCACCTGTGCGTGTGTGTGTGTGCGTGTTAGAAGCTTTGAAAGATCCTCTCAACACAGCAGTGTGCACGTGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTAGTTTCGGAGCACCAAAAAAAAACGCACCACAAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGTCTGTGGCCATCTTGCTCTGAAGGTATCCCCACCCGCTCCAGTGTGCGCAGGATAAAAAGAACAGCCAAGCAAGCCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGCAAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGCTAAGACGGCAGCCGCCGCTACCAATGGCGATGCGACGGAGAGTGAGA]


>consensus_9175#1 CCGCCTTAGCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTTTGTCCCAAGCAAGTA AGCCACACCAAGGCAAAGCAAAAAAGCCAGTGTTCAGTTCGCTCCTGCGGCTAGTCAGTA GAGGTCACAGTCAAATCGTAGCGGCAGTGTGTCCAATCCGTTCTTGTTTGTTACGTGTGT ACACATCTCACCTCGCAAGCAGAAGCCGCGCCGTATTCATCCCCACGGCAAGCAAGCAAC AGAATTAAAAAAAAATAATCCAAAACCGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCG CTCGGCCAGCCAGTGTGTGCGTCACTCGACAGTGCGTGTTCTCGTTCTGTGTGCCCGCGT GTGTGTTTTAGTCTCCGGTGGAGAGGAAAGGCTGGAAAATTTGTAGTGCGAAGGAATTCA GCAAGCGAAACAGTGCTAAAAAGCTGTGCAATTGTGATCACCTGTGCGTGTGTGTGTGTG CGTGTTAGAAGCTTTGAAAGATCCTCTCAACACAGCAGTGTGCACGTGTGTGTGTGTGTT TGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTAGTTTCGGAGCACCAAAAAAAAACGC ACCACAAAAACAGGAAGAAAAGCTGCACAAGTGTCCATCTTATTTTGGTCTGTGGCCATC TTGCTCTGAAGGTATCCCCACCCGCTCCAGTGTGCGCAGGATAAAAAGAACAGCCAAGCA AGCCCCCCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCAGC AAGATGACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCG TCGCCCACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGA GATGCTAAGACGGCAGCCGCCGCTACCAATGGCGATGCGACGGAGAGTGAGA



consensusID : consensus_9175#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 540
fasta sequence
                              [CCCGAGGTNACGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGTCGGCAGCCAGTGTGTGCTGTCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGGTGGAGAAGGNCTGGAAAATTTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAAAGCCAATGCAATTGTGATCACCTGTGTGTGTGCGTGTTAAAGCTTGGAAAGATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACACAAAACAGGAAGAAAAGCTGCGACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCAAGCAAGCCCCCCCGGGCCACGCGTGTACCTTTTCGNTAAGCTCGCTTTCAACGCATAATCACGCAAGATGACTGAAACCACAGAAGC]

[+] EMBL AL930471             [CCCGAGGTNACGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGTCGGCAGCCAGTGTGTGCTGTCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGGTGGAGAAGGNCTGGAAAATTTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAAAGCCAATGCAATTGTGATCACCTGTGTGTGTGCGTGTTAAAGCTTGGAAAGATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACACAAAACAGGAAGAAAAGCTGCGACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCAAGCAAGCCCCCCCGGGCCACGCGTGTACCTTTTCGNTAAGCTCGCTTTCAACGCATAATCACGCAAGATGACTGAAACCACAGAAGC]


>consensus_9175#2 CCCGAGGTNACGGTAAGGGATCATCTCGGTTCCTTTGTTCCCCGTCGGCAGCCAGTGTGT GCTGTCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTTAGTCTCCGG TGGAGAAGGNCTGGAAAATTTTGTAGTGCGAAGGAATTCAGCTTGGAAACAGTGCTAAAA AGCCAATGCAATTGTGATCACCTGTGTGTGTGCGTGTTAAAGCTTGGAAAGATCCTCTCA ACACATCAGTGTGCACGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAGGAAGAGTTCGCC CGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACACAAAACAGGAAGAAAAG CTGCGACAAGTGTCCATCTTATTTTGGACCTGGCCATCTTGCTCTGAAGGTATCCCACCC GCTCCCCTGTGCGCAGGATAAAAAAGAACAGCAAGCAAGCCCCCCCGGGCCACGCGTGTA CCTTTTCGNTAAGCTCGCTTTCAACGCATAATCACGCAAGATGACTGAAACCACAGAAGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9175#0      CCGGCGGTCGGTCGAACAAAGCCAAACCTTGGGGAAGTTAAAAAAAAAAACGCACACAAA 60
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      AAGGCACTGCAGCGACGAACAACTGTTTCCTTCCATATGGCAATGCATTCACAGTCTTGT 120
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      AATGCCTTTTGGGTGAATCATTTTCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTT 180
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ---------------CCGCCTTAGCGTTCGGTTGTGTGTCCGTGCGTCTCCGGCCATTTT 45
                                                                                  

consensus_9175#0      TGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAGCA--CAGTGTTCAGTTCACTCC 238
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      TGTCCCAAGCAAGTAAGCCACACCAAGGCAAAGCAAAAAAGCCAGTGTTCAGTTCGCTCC 105
                                                                                  

consensus_9175#0      TGCGGCTAGTCGGGTAGAGGTCACAGTCGTCAAATCCAATTGTAGCGGCAGTGTGTCCAG 298
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      TGCGGCTAGTCAG-TAGAGGTCACAGTCA--------AATCGTAGCGGCAGTGTGTCCAA 156
                                                                                  

consensus_9175#0      TCCGTTTTTGTTTGTTACGTGT--ACACATCTCACCTCGCAAGCAGAAGACGCGCCATAT 356
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      TCCGTTCTTGTTTGTTACGTGTGTACACATCTCACCTCGCAAGCAGAAGCCGCGCCGTAT 216
                                                                                  

consensus_9175#0      TCATCCCCGCGGCAGCTCAATCGAGAAAGCAACAGAATTTAAAAAAAAGTAATCTCAA-- 414
consensus_9175#2      -----------------------------------------------------CCCGAGG 7
consensus_9175#1      TCATCCCCACGGCA---------AGCAAGCAACAGAATT-AAAAAAAAATAATCCAAA-- 264
                                                                           *   *  

consensus_9175#0      -ACCGGTAAGGGCATCATCTCGGTTCCTTTGTTCCCCGCGCGGCCAGCCAGTGTGTGC-G 472
consensus_9175#2      TNACGGTAAGGG-ATCATCTCGGTTCCTTTGTTCCCCGT-CGGC-AGCCAGTGTGTGCTG 64
consensus_9175#1      -ACCGGTAAGGG-ATCATCTCGGTTCCTTTGTTCCCCGCTCGGCCAGCCAGTGTGTGC-G 321
                         ********* *************************  **** ************* *

consensus_9175#0      TCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTT-AGTCTCCGGTGG 531
consensus_9175#2      TCACTCGAGAGTGCGTGTTCTCGTTCTGTGTGCGCGTGTGTGTGTTT-AGTCTCCGGTGG 123
consensus_9175#1      TCACTCGACAGTGCGTGTTCTCGTTCTGTGTGCCCGCGTGTGTGTTTTAGTCTCCGGTGG 381
                      ******** ************************ ** ********** ************

consensus_9175#0      AGAAG---GCCTGGAAAATTT-GTAGTGCGAAGGAATTCAGCTTG-GAAACAGTGCTAAA 586
consensus_9175#2      AGAAG---GNCTGGAAAATTTTGTAGTGCGAAGGAATTCAGCTTG-GAAACAGTGCTAAA 179
consensus_9175#1      AGAGGAAAGGCTGGAAAATTT-GTAGTGCGAAGGAATTCAGCAAGCGAAACAGTGCTAAA 440
                      *** *   * *********** ********************  * **************

consensus_9175#0      AAGCCAATGCAATTGTGATCACCTGTG--------TGTGTGCGTGTTAGAAGCTTGGAAA 638
consensus_9175#2      AAGCCAATGCAATTGTGATCACCTGTG--------TGTGTGCGTGTTA-AAGCTTGGAAA 230
consensus_9175#1      AAGCTG-TGCAATTGTGATCACCTGTGCGTGTGTGTGTGTGCGTGTTAGAAGCTTTGAAA 499
                      ****   ********************        ************* ****** ****

consensus_9175#0      GATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGT--TTGTTTGAAGGTACTGAAAG 696
consensus_9175#2      GATCCTCTCAACACATCAGTGTGCACGTGTGTGTGTGT--TTGTTTGAAGGTACTGAAAG 288
consensus_9175#1      GATCCTCTCAACACAGCAGTGTGCACGTGTGTGTGTGTGTTTGTTTGAAGGTACTGAAAG 559
                      *************** **********************  ********************

consensus_9175#0      GAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCACCACAAA 756
consensus_9175#2      GAAGAGTTCGCCCGTCCCCGTATCCGTAGTTCGGAGCGCAAAAAAAAAACGCAC-ACAAA 347
consensus_9175#1      GAAGAGTTCGCCCGTA-----------GTTTCGGAGCACCAAAAAAAAACGCACCACAAA 608
                      ***************              ******** * ************** *****

consensus_9175#0      A-CAGGAAGAAAAGCTGC-ACAAGTGTCCATCTTATTTTGGACC-TGGCCATCTTGCTCT 813
consensus_9175#2      A-CAGGAAGAAAAGCTGCGACAAGTGTCCATCTTATTTTGGACC-TGGCCATCTTGCTCT 405
consensus_9175#1      AACAGGAAGAAAAGCTGC-ACAAGTGTCCATCTTATTTTGGTCTGTGGCCATCTTGCTCT 667
                      * **************** ********************** *  ***************

consensus_9175#0      GAAGGTATCCC-ACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGCCAAGCAAGCCCC 872
consensus_9175#2      GAAGGTATCCC-ACCCGCTCCCCTGTGCGCAGGATAAAAAAGAACAGC-AAGCAAGCCCC 463
consensus_9175#1      GAAGGTATCCCCACCCGCTCCAGTGTGCGCAGGATAAAAA-GAACAGCCAAGCAAGCCCC 726
                      *********** *********  ***************** ******* ***********

consensus_9175#0      CCC-GGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCA-GCAAGAT 930
consensus_9175#2      CCC-GGGCCACGCGTGTACCTTTTCGNTAAGCTCGCTTTCAACGCATAATCACGCAAGAT 522
consensus_9175#1      CCCCGGCCCACGCGTGTACCTTTTCGCTAAGCTCGCTTTCAACGCATAATCA-GCAAGAT 785
                      *** ** ******************* ************************* *******

consensus_9175#0      GACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCC 990
consensus_9175#2      GACTGAAACCACAGAAGC------------------------------------------ 540
consensus_9175#1      GACTGAAACCACAGAAGCACCAGTCGTTGCACAGACCGCCGAAACGAAGACCCCGTCGCC 845
                      ******************                                          

consensus_9175#0      CACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGC 1050
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      CACGAACGAGACGGCCGTCGTCACGCCGGCCGAGAACGGGCATGCCGAGGGTGGAGATGC 905
                                                                                  

consensus_9175#0      CAAGACGGCAGTCGCCGGCGAAGAACAGACCAACGGCGGTGCGACCCCGGACGAGAAGGC 1110
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      TAAGACGGCAGCCGCCGCT---------ACCAATGGCGATGCGACGGAGAGTGAGA---- 952
                                                                                  

consensus_9175#0      GAAGGCCGAGGAGAAGAAGGAAGACCCACCGAAGGAGATGCGCGCCGTCGTGCTGACCGG 1170
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      TTTCGGTGGTTTCAAGAACGTGAAGATCCTGAAAAAGCCCGAACCGTCGCCCCAGGCCGG 1230
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      CGAGGTGCTGATCCGCGTCAAGGCATGTGGACTGAACTTCCAGGATCTGATGGTACGACT 1290
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      CGGTGCGATCGATTCGCCGCCAAAAACTCCTACCATCCTCGGTTTCGAGTGTGCCGGCGA 1350
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      GATTGAAGCCGTCGGTGAAGAGGTCGAAGGATTCAAGGTTGGCGATCGTGTGGTGGCCCT 1410
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      GCCGGAATTCCGGGCCTGGTCCGAGCTGGTGGCCGTCCCGACCAAGTACGTCTATCACAT 1470
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      TCCGGACGAGATGACATTCCAGGACGCGGCCGCCATCGTGATGAACTATCTGGTCGCCTA 1530
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      CATTCTCATCTTCGATCTGGTGTCGCTGCGCGAGGGCAAGTCGATTCTGCTGCATTCCGT 1590
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      CGGCGGTGGTGTGGGTCAAGCCATCGTACAGCTGGCACGCACCGTGCCGAATGTAACCAT 1650
consensus_9175#2      ------------------------------------------------------------
consensus_9175#1      ------------------------------------------------------------
                                                                                  

consensus_9175#0      TTTCGGTGTTTGCTCAAAGTCGAAGCACGAAGCGCTCGAGGC 1692
consensus_9175#2      ------------------------------------------
consensus_9175#1      ------------------------------------------
                                                                




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)