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Anopheles gambiae
cluster # 9177 cluster # 9177       Sequences # 14       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9177#0 length = 1976 sequences # 11  
 consensus_9177#1 length = 603 sequences # 2  
consensus_9177#2 length = 154 sequences # 1  
consensusID : consensus_9177#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1976
fasta sequence 
                              [CCGCCCACGCGTCCGGTATATTTTGAGAAGGGTGTCGTAATGAACCGTCATCGTGCGTAGGGCCCCGAAAAGAAGCAAGCGCTAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGTGACTATTTTCTACACACACGCACACACCGCACCCCGGACTACGGTACGCCCACCCCGGAAAG-GAATCGTCGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCGAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCAGCAGCAGTGTGGGCCCTCCTTCCCCGA--GTGTGTGTGTGTACGTGC----GTGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAAC------CC--GATCCCGGAGTGTGCGGCGCAGTGCCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTGAATACACAACCAGCCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGTGGGGGAAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGTAGCCTCCGCAGCGACCAGCCAAATGCCAACCGAATCCGGCGAGGGGGAAAAGAGTGACACACCGCAGCAGAGCGGGTCGGAGGAATCGAAGGACAGCGCCAACGGCAAAGCGACCGCAGATCACGCGACATCCTCTTCCTCATCATCATCATCATCATCATCGTCATCTTCCAAAGGTGTTCCGCCGACGAGCAGAACGTTCGACAAAGTACCGATCTTTGTGGTGGAGGACCATCACGAAGTGCTCACGTTCCTTTATCGCTGCCTCGGCTCGAAGCATTTACCCCTGCAGGGCAACCGGATCGTGCACTTTGACTCGCACCCGGACATGTGCATCCCGAAGCACATGCCCGCCAACTACGTGTTCAACAAGGACGACCTGCTGGACAGCATCAGCATTGAGAACTGGCTGATGCCGACCGTGTTCGCTGGGCACGTGGAGCGCATCGTGTGGATTAAGCCGCCGTGGTCGGAGCAGATCCCGAAGGGCAAGTACGCGTTCCATGTGGGCGAGTTCGAGGGCTCGATCCGGACGGACTCGACGCTGGAGTACTTCGTGTCGGAGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGCAAGCGCCTCCAGCTGGAGGTGTGCTCGGTCGAGGAGTACCCGGTGGCGGAGGACACGGACCTGGCCCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTCCTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCGTCTCGCCCGAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGCGTGGCGCGCGACCGGGAGGAGAAGCTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAACACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCCGGGCTGCTGGAGAAAGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAGATCGACTGGTCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCGAGCCGGGAGGAGATCGAAACGATGGTCGGCCAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGC-CGGTCGTCATCACGGTGTCGCGATCGAGCGAAGACGACTACACACCGGCCGGGC-AGGTGGAGATGATACAGG-AGATGGTGCTGGCAGCGCTTACAAAGTGCCTGCGGGCGGAGCTCGACACCCCGATACTGTACTATAAGGATCAGGAACTTAATTTTTAAGGACAATAATAAAAGAAAACGACAACAAAAAAACACCACCACCATACACACCAATGCCCCCTTCTCCCTATTTAAGT]

[+] EMBL BM587979             [CCGCCCACGCGTCCGGTATATTTTGAGAAGGGTGTCGTAATGAACCGTCATCGTGCGTAGGGCCCCGAAAAGAAGCAAGCGCTAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGTGACTATTTTCTACACACACGCATACACCGCACCCCGGACTACGGTACGCCCACCCCGGAAAG GAATCGTCGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCGAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCAGCAGCAGTGTGGGCCCTCCTTCCCCGA  GTGTGTGTGTGTACGTGC    GTGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAAC      CC  GATCCCGGAGTGTGCGGCGCAGTGCCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTGAATACACAACCAGCCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGTGGGGGAAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGTAGCCTCCGCAGCGACCAGCCAAATGCCAACCGAATCCGGCGAGGGGGAAAAGAGTGACACACCGCAGCAGAGCGGGTCGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CNS09A96             [                                                                    AAAGAAG AAGCGCTAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGTGACTATTTTCTACACACACGCACACACCGCACCCCGGACTACGGTACGCCCACCCCGGAAAGAGAATCGTCGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCGAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCAGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTGTGTACGTGCGTGTGTGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGCAACGGGTTACCTTGATCCCGGAGTGTGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM644272             [                                                                                                                                              ccgatCGCACCCCGGACTACGGTACGCCCA CCCGGAAAG GAATCGTGGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCC GCAGCAGTGTGGGCCCTCCTTCCCCGA    GTGTGTGTGTACGTGC      GTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAACGGGTTACCTTGATCCCGGAGTGTGCGGCGCAGTGGCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTGAATACACAACCAACCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGCGGGGGAAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGCAGCCTCCGCAGCGACCAGCCAAATGCCAACCGAATCCGGCGCGGGGGAAAAGAGTGACACACCGCAGCCGAGCGGGTCGGAGGAATCGAAGGACAGCGCCAACGGCAAAGCGACCGCAGATCACGCGACATCCTCTTCCTCATCATCATCATCATCATCATCGTCATCTTCCAAAGGTGTTCCGCCGACGAGCAGAACGTTCGACAAAGTACCGATCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM619241             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ccgTACACAACCAGCCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGTGGGGGAAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGTAGCCTCCGCAGCGACCAGCCAAATGCCAACCGAATCCGGCGAGGGGGAAAAGAGTGACACACCGCAGCAGAGCGGGTCGGAGGAATCGAAGGACAGCGCCAACGGCAAAGCGACCGCAGATCACGCGACATCCTCTTCCTCATCATCATCATCATCATCATCGTCATCTTCCAAAGGTGTTCCGCCGACGAGCAGAACGTTCGACAAAGTACCGATCTTTGTGGTGGAGGACCATCACGAAGTGCTCACGTTCCTTTATCGCTGCCTCGGCTCGAAGCATTTACCCCTGCAGGGCAACCGGATCGTGCACTTTGACTCGCACCCGGACATGTGCATCCCGAAGCACATGCCCGCCAACTACGTGTTCAACAAGGACGACCTGCTGGACAGCATCAGCATTGAGAACTGGCTGATGCCGACCGTGTTCGCTGGGCACGTGGAGCGCATCGTGTGGATTAAGCCGCCGTGGTCGGAGCAGATCCCGAAGGGCAAGTACGCGTTCCATGTGGGCGAGTTCGAGGGCTCGATCCGGACGGACTCGACGCTGGAGTACTTCGTGTCGGAGGGTTGCTACCAGCCGGAGGACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL CNS08DF1             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TCGTGCACTTTGACTCGCACCCGGACATGTGCATCCCGAAGCACATGCCCGCCAACTACGTGTTCAACAAGGACGACCTGCTGGACAGCATCAGCATCGAGAACTGGCTGATGCCGACCGTGTTCGCTGGGCACGTGGAGCGCATCGTGTGGATTAAGCCGCCGTGGTCGGAGCAGATCCCGAA  GCAAGTACGCGTTCCATGTGGGCGAGTTCGAGGGCTCGATCCGGACGGACTCGACGCTGGAGTACTTCGTGTCGGAGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGCAAGCTCCTCCAGCTGGAGGTGTGCTCGGTCGAAGAGTACCCGGTGGCGGAGGACACGGACCTGGCCCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTCCTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCGTCTCGCCCGAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGCGTGGCGCGCGACCGGGAGGAGAAGCTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAACACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCCGGGCTGCTGGAGAAAGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTTCAAGGAGGAGGAGATCGACTGGTCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCGAGCCGGGAGGAGATCGAAACGATGGTCGGCCAGCTGGAGC                                                                                                                                                                                                                                                                            ]
[+] EMBL BX613945             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGGGCTCGATCCGGACGGACTCGACGCTGGAGTACTTCGTGTCGGAGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGCAAGCGCCTCCAGCTGGAGGTGTGCTCGGTCGAGGAGTATTCGGTGGCGGAGGACACGGACCTGGCCCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTCCTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCGTCTCGCCCGAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGCGTGGCGCGCGACCGGGAGGAGAAGCTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAACACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCGGGGCTGCTCGAGAAGGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAGATCGACTGGTCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCGAGCCGGGAGGAGATCGAAACGATGGTCGGCCAGCTGGAGCGCTTCCTGGA AAAGTGCCGTGCCCAC CGGTCGTCATCACGGTGTCGCGATCGAGCGAAGACG                                                                                                                                                                                                            ]
[+] EMBL BX626013             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGCAAGCGCCTCCAGCTGGAGGTGTGCTCGGTCGAGGAGTACCCGGTGGCGGAGGACACGGATCTGGCGCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTTCTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCGTTTCGCCCGAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGTGTGGCGCGCGACCGGGAGGAGAAGCTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAGCACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCGGGGCTGCTCGAGAAGGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAAATCGACTGGTCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGAT                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL BM635590             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ccGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGCAAGCGCCTCCAGCTGGAGGTGTGCTCGGTCGAGGAGTACCCGGTGGCGGAGGACACGGACCTGG  CAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTCCTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAAGACATCTTCGTCTCGCCCGAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGTGTGGCGCGCGACCGAGAGGAGAAGCTGGAATTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAGCACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCCGGGCTGCTGGAGAAAGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAGATCGACTGGTCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCGAGCCGGGAGGAGATCGAAACGATGGTCGGCCAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGC CGGTCGTCATCACGGTGTCGCGATCGAGCGAAGACGACTACACACCGGCCGGGCAAGGTGGAGATGATACAGGAAGATGGTGCTGGCAGCGCTTACAAAGTGCCTG                                                                                                                                      ]
[+] EMBL BX613946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGACAAGCTGGAGAACCGCAAGCGCCTCCAGCTGGAGGGGTGCTCGGTCGAGGAGTATCCGGTGGCGGAGGACACGGACCTGGCCCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAAGCCCTGCCTGAAGAACAACGACCGGGGGCAGCTGTACGAGAAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CNS08DF2             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GTGGCGGAGGACACGGACCTGGCCCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGAAAACAAAATCCCTTCCTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCTTCTCGCCCGAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAG GCGTGGCGCGCGACCGGGAGGAGAAGCTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAACACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCCGGGCTGCTGGAGAAAGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAGATCGACTGGTCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCGAGCCGGGAGGAGATCGAAACGATGGTCGGCCAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGC TGGTCGTCATCACGGTGTCGCGATCGAGCGAAGACGACTACACACCGGCCGGGC AGGTGGAGATGATACAGG AGATGGTGCTGGCAGCGCTTACAAAGTGCCTGCGGGCGGAGCTCGACACCCCGATACTGTACTATAAGGATCAGGAACTTAATTTTTAAGGACAATAATAAAAGAAAACGACAACAAAAAAACACCACCACCATACACACCAATGCCCCCTTCTCCCTATTTAAGT]
[-] EMBL CNS09A97             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           AGCGCTTCCTGGAGAAGGTGCCGTGCCCGCGCGGTCGTCATCACGGTGTCGCGATCGAGCGAAGACGACTACACACCGGCCGGGC AGGTGGAGATGATACAGG AGATGGTGCTGGCAGCGCTTACAAAGTG CTGCGGGCGGAGCTCGACACCCCGATACTGTACTATAAGGATCAGGAACTTAATTTGTAAGGACAATAATAAAAGAAAACGACAACAAAAAAACACCACCACCA                                 ]




>consensus_9177#0
CCGCCCACGCGTCCGGTATATTTTGAGAAGGGTGTCGTAATGAACCGTCATCGTGCGTAG
GGCCCCGAAAAGAAGCAAGCGCTAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGT
GACTATTTTCTACACACACGCACACACCGCACCCCGGACTACGGTACGCCCACCCCGGAA
AGGAATCGTCGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCG
ATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCGAGCAGGGGCTAATGAGTGA
AAATTGATTGGCAGCCAGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTGTACGT
GCGTGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAACCCGATCCCGGAGTGTGCGG
CGCAGTGCCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTG
AATACACAACCAGCCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGTGGGGG
AAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGTAGCCTCCGCA
GCGACCAGCCAAATGCCAACCGAATCCGGCGAGGGGGAAAAGAGTGACACACCGCAGCAG
AGCGGGTCGGAGGAATCGAAGGACAGCGCCAACGGCAAAGCGACCGCAGATCACGCGACA
TCCTCTTCCTCATCATCATCATCATCATCATCGTCATCTTCCAAAGGTGTTCCGCCGACG
AGCAGAACGTTCGACAAAGTACCGATCTTTGTGGTGGAGGACCATCACGAAGTGCTCACG
TTCCTTTATCGCTGCCTCGGCTCGAAGCATTTACCCCTGCAGGGCAACCGGATCGTGCAC
TTTGACTCGCACCCGGACATGTGCATCCCGAAGCACATGCCCGCCAACTACGTGTTCAAC
AAGGACGACCTGCTGGACAGCATCAGCATTGAGAACTGGCTGATGCCGACCGTGTTCGCT
GGGCACGTGGAGCGCATCGTGTGGATTAAGCCGCCGTGGTCGGAGCAGATCCCGAAGGGC
AAGTACGCGTTCCATGTGGGCGAGTTCGAGGGCTCGATCCGGACGGACTCGACGCTGGAG
TACTTCGTGTCGGAGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGCAAGCGCCTC
CAGCTGGAGGTGTGCTCGGTCGAGGAGTACCCGGTGGCGGAGGACACGGACCTGGCCCAG
GGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTCCTGAAGATC
TACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCGTCTCGCCCGAGCTGGCC
GACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGCGTGGCGCGCGACCGGGAGGAGAAG
CTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTGAAACACTTC
CTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCCGGGCTGCTGGAGAAAGTGACG
GTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAGATCGACTGGTCGATGATA
TACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCGAGCCGGGAG
GAGATCGAAACGATGGTCGGCCAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGCCG
GTCGTCATCACGGTGTCGCGATCGAGCGAAGACGACTACACACCGGCCGGGCAGGTGGAG
ATGATACAGGAGATGGTGCTGGCAGCGCTTACAAAGTGCCTGCGGGCGGAGCTCGACACC
CCGATACTGTACTATAAGGATCAGGAACTTAATTTTTAAGGACAATAATAAAAGAAAACG
ACAACAAAAAAACACCACCACCATACACACCAATGCCCCCTTCTCCCTATTTAAGT

consensusID : consensus_9177#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 603
fasta sequence 
                              [CCGCCCACGCGTCCGGAAAAGAAGCAAGCGCAAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGTGACTATTTTCTACACACACGCACACATCGCACCCCGGACTACGGTACGCCCACCCGGAAAGGAATCGTGGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTACGTGCGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAACGGGTTACCTTGATCCCGGAGTGTGCGGCGCAGTGGCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTGAATACACAACCAACCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGCGGGGGAAGTCCACGGAATGCGACGGGGAGAAGGTGGAAGAAACACCAACAAAAGCAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGCCGGTCGTCATCACGGTGTCGCGATCG]

[+] EMBL BM635372             [CCGCCCACGCGTCCGGAAAAGAAGCAAGCGCAAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGTGACTATTTTCTACACACACGCACACATCGCACCCCGGACTACGGTACGCCCACCCGGAAAGGAATCGTGGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTACGTGCGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAACGGGTTACCTTGATCCCGGAGTGTGCGGCGCAGTGGCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTGAATACACAACCAACCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGCGGGGGAAGTCCACGGAATGCGACGGGGAGAAGGTGGAAGAAACACCAACAAAAGCA                                                             ]
[+] EMBL BX628507             [                                       TGGAGCAGCTCCAGCGCGTATAAGTTTCGTGACTATTTTCTACACACACGCACACATCGCACCCCGGACTACGGTACGCCCACCCGGAAAGGAATCGTGGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTACGTGCGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAACGGGTTACCTTGATCCCGGAGTGTGCGGCGCAGTGGCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTGTACGATTGAATACACAACCAACCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCGAGCGGGGGAAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGCAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGCCGGTCGTCATCACGGTGTCGCGATCG]




>consensus_9177#1
CCGCCCACGCGTCCGGAAAAGAAGCAAGCGCAAGTTGTGTGGAGCAGCTCCAGCGCGTAT
AAGTTTCGTGACTATTTTCTACACACACGCACACATCGCACCCCGGACTACGGTACGCCC
ACCCGGAAAGGAATCGTGGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGG
ACGGCGCGATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCTAGCAGGGGCTA
ATGAGTGAAAATTGATTGGCAGCCGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTG
TACGTGCGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAACGGGTTACCTTGATCCC
GGAGTGTGCGGCGCAGTGGCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACT
CTGTACGATTGAATACACAACCAACCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTA
TCGAGCGGGGGAAGTCCACGGAATGCGACGGGGAGAAGGTGGAAGAAACACCAACAAAAG
CAGCTGGAGCGCTTCCTGGAGAAGGTGCCGTGCCCGCCGGTCGTCATCACGGTGTCGCGA
TCG

consensusID : consensus_9177#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 154
fasta sequence 
                              [CTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCAGCATCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTGTACGTGCGTGTGTGTGTGTGCGTCTGTATCTGGTAACGGGTTACCTTGATCCCGGAGTG]

[+] EMBL BM580730             [CTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCAGCATCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTGTACGTGCGTGTGTGTGTGTGCGTCTGTATCTGGTAACGGGTTACCTTGATCCCGGAGTG]




>consensus_9177#2
CTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGAAAATTGATTGGCAGCCAGCA
TCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTGTACGTGCGTGTGTGTGTGTGCGTCT
GTATCTGGTAACGGGTTACCTTGATCCCGGAGTG

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9177#1      --------------------------------------------------CCGCCCAC-G 9
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CCGCCCACGCGTCCGGTATATTTTGAGAAGGGTGTCGTAATGAACCGTCATCGTGCGTAG 60
                                                                                  

consensus_9177#1      CGTCCGGAAAAGAAGCAAGCGCAAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGT 69
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GGCCCCGAAAAGAAGCAAGCGCTAGTTGTGTGGAGCAGCTCCAGCGCGTATAAGTTTCGT 120
                                                                                  

consensus_9177#1      GACTATTTTCTACACACACGCACACATCGCACCCCGGACTACGGTACGCCCACCC-GGAA 128
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GACTATTTTCTACACACACGCACACACCGCACCCCGGACTACGGTACGCCCACCCCGGAA 180
                                                                                  

consensus_9177#1      AGGAATCGTGGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCG 188
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AGGAATCGTCGGCCAGCGGACGGACGCGCACCGATACAGGACGCCCTGGTGGACGGCGCG 240
                                                                                  

consensus_9177#1      ATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGA 248
consensus_9177#2      --------------------CTATCCGCTCGCGCTCGCTCTAGCAGGGGCTAATGAGTGA 40
consensus_9177#0      ATTGTCCCCGGGTAGTAGCAGTATCCGCTCGCGCTCGCTCGAGCAGGGGCTAATGAGTGA 300
                                           ******************* *******************

consensus_9177#1      AAATTGATTGGCAGCC-GCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGT--ACGT 305
consensus_9177#2      AAATTGATTGGCAGCCAGCATCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGT--GTAC 98
consensus_9177#0      AAATTGATTGGCAGCCAGCAGCAGTGTGGGCCCTCCTTCCCCGAGTGTGTGTGTGTACGT 360
                      **************** *** *********************************      

consensus_9177#1      GCGTGTGTGTGTG--CGTCTGTATGTCTGGCTGCTGGTAACGGGTTACCTTGATCCCGGA 363
consensus_9177#2      GTGCGTGTGTGTG--TGTGCGTCTGTAT-----CTGGTAACGGGTTACCTTGATCCCGGA 151
consensus_9177#0      GCGTGTGTGTGTGTGCGTCTGTATGTCTGGCTGCTGGTAAC--------CCGATCCCGGA 412
                      * * *********   **  ** *** *     ********          *********

consensus_9177#1      GTGTGCGGCGCAGTGGCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTG 423
consensus_9177#2      GTG--------------------------------------------------------- 154
consensus_9177#0      GTGTGCGGCGCAGTGCCGGTGTTGTGAAGTGGAATTATTTTCTTTACGGATTATACTCTG 472
                      ***                                                         

consensus_9177#1      TACGATTGAATACACAACCAACCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCG 483
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      TACGATTGAATACACAACCAGCCACGATGGAAGCTCCCCCGAGTGTGGATGACTCTATCG 532
                                                                                  

consensus_9177#1      AGCGGGGGAAGTCCACGGAATGCGACGGGGAGAAGGTGGAAGAAACACCAACAAAAGCAG 543
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AGTGGGGGAAGTCGACGGAATGCGACGGGGAGAAGGTGGAAGAAACACAAACAAAAGTAG 592
                                                                                  

consensus_9177#1      CTGGAGC-GCTTCCTGGAGAAGGT--GCCGTGCCCGCCGGTCGTCATCACGGTGTCGCGA 600
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CCTCCGCAGCGACCAGCCAAATGCCAACCGAATCCGGCGAGGGGGAAAAGAGTGACAC-A 651
                                                                                  

consensus_9177#1      TCG--------------------------------------------------------- 603
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CCGCAGCAGAGCGGGTCGGAGGAATCGAAGGACAGCGCCAACGGCAAAGCGACCGCAGAT 711
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CACGCGACATCCTCTTCCTCATCATCATCATCATCATCATCGTCATCTTCCAAAGGTGTT 771
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CCGCCGACGAGCAGAACGTTCGACAAAGTACCGATCTTTGTGGTGGAGGACCATCACGAA 831
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GTGCTCACGTTCCTTTATCGCTGCCTCGGCTCGAAGCATTTACCCCTGCAGGGCAACCGG 891
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      ATCGTGCACTTTGACTCGCACCCGGACATGTGCATCCCGAAGCACATGCCCGCCAACTAC 951
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GTGTTCAACAAGGACGACCTGCTGGACAGCATCAGCATTGAGAACTGGCTGATGCCGACC 1011
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GTGTTCGCTGGGCACGTGGAGCGCATCGTGTGGATTAAGCCGCCGTGGTCGGAGCAGATC 1071
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CCGAAGGGCAAGTACGCGTTCCATGTGGGCGAGTTCGAGGGCTCGATCCGGACGGACTCG 1131
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      ACGCTGGAGTACTTCGTGTCGGAGGGTTGCTACCAGCCGGAGGACAAGCTGGAGAACCGC 1191
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AAGCGCCTCCAGCTGGAGGTGTGCTCGGTCGAGGAGTACCCGGTGGCGGAGGACACGGAC 1251
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CTGGCCCAGGGCTACATCCTCGATATCGATCTGGACTACTTCAGCACACACAATCCCTTC 1311
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CTGAAGATCTACGACCGGGTGCAGCTGTACGAGAAGCTGAAGGACATCTTCGTCTCGCCC 1371
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GAGCTGGCCGACGACGCGGAGAACGATCTCGCCAAGCTGCAGCGCGTGGCGCGCGACCGG 1431
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      GAGGAGAAGCTGGAGTTTCTCGAGTCGATCTTCCTGTACCTGGAGGAGGTGGGCAACCTG 1491
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AAACACTTCCTGGTGGACTACCAGCAGGAGATCAGCGAGGAGTACGCCGGGCTGCTGGAG 1551
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AAAGTGACGGTCCTGGTGCGGACGCTGAAGCGCGAGTACAAGGAGGAGGAGATCGACTGG 1611
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      TCGATGATATACGATGCCGGGTGCACGTGCGACGTGACCGATCTGCCGCACCACGAGTCG 1671
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AGCCGGGAGGAGATCGAAACGATGGTCGGCCAGCTGGAGCGCTTCCTGGAGAAGGTGCCG 1731
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      TGCCCGCCGGTCGTCATCACGGTGTCGCGATCGAGCGAAGACGACTACACACCGGCCGGG 1791
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CAGGTGGAGATGATACAGGAGATGGTGCTGGCAGCGCTTACAAAGTGCCTGCGGGCGGAG 1851
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      CTCGACACCCCGATACTGTACTATAAGGATCAGGAACTTAATTTTTAAGGACAATAATAA 1911
                                                                                  

consensus_9177#1      ------------------------------------------------------------
consensus_9177#2      ------------------------------------------------------------
consensus_9177#0      AAGAAAACGACAACAAAAAAACACCACCACCATACACACCAATGCCCCCTTCTCCCTATT 1971
                                                                                  

consensus_9177#1      -----
consensus_9177#2      -----
consensus_9177#0      TAAGT 1976


Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)