cluster # 9179

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Anopheles gambiae
cluster # 9179 cluster # 9179 Sequences # 14 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9179#0 length = 1346 sequences # 11
consensus_9179#1 length = 799 sequences # 1

consensus_9179#2 length = 605 sequences # 1
consensus_9179#3 length = 397 sequences # 1

consensusID : consensus_9179#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 11
consensus length = 1346
fasta sequence

                              [CCGTTGGCAGATCGTTCGAGCTG-GACGAAAT-GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC-AAAACACGCGCGGCAAGATTCAGAACATCATCAAACCGGACCTGCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCC-TTCCCGACCAATG-CGACGGTCGAGCGGCCGTTCTTCACCGGCAGAATGCACACGGCGGGCCGGTACGGT-GGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAGC-GAATCTTCTACTACAAACATGCCGAGCGGTTGGGTGCCCAGTTTCTGCGCCTACCGTACGACTCTAACCAGCTGTCGATGATCGTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAGCTACTGTCCCGGCTTACGGCCGATGCGGTCCACGAAACGCTGGCCGACATGTCCGAGGAGGAGGTCGAAATCGAGCTGCCCCGCTTTACGATGACTTATTCGAGCTCGTTGCGCGAATGTCTGCAGCAGCTGGGCGTCTCGCGGGTCTTCACCGACCAGGCAGAGTTGCCGCTGATTTCGCGAGGTCGCACCACCCCGCTGAAGGTTAGCACGATACTGCAGAAGAGCTGCATTCTGGTCGACGAGCAGGGGACGGAAGCGTCGGCGGCGACCGAGGGCACGCTGGTGTTTACCATTCTCAACCAACCGGTCAAGTTCATTGCCAACCGGCCGTTCCTCTTCCTGATCTACGACGAAAGCAAGGGCAACTGGCTGTTTGCCGGCAAGGTGGAAGATCCACAAACGTAAGCGGGCGACAAACAGTGACCAAACAACAGAGCTTCTTGTATGAGCAGTATCAATAAAGAT]

[+] EMBL BM601562             [CCGTTGGCAGATCGTTCGAGCTG GACGAAAT GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCAGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTttca                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL BM615561             [    ccGCAGATCGTTCGAGCTG GACGAAAT GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAAGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCAGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAACATCATCAAACCGGACCTGCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCC TTCCCGACCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL BM597183             [      ccgGATCGTTCGAGCTG GACGAAAT GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCAGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTTACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCATTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAGCATCATCAAACCGGACCTGCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCCTGGTCCATCCCC TTCCCGACCAATG CGACGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL BM646361             [         ccgCGTTCGAGCTG GACGAAAT GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCAGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCAGCGGCCGAAATCAATGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAGCATCATCAAACCGGACCTCCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCTTGGTCCATCCCCTTTCCCAACCAATG CGACGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08MSO             [                 GAGCTGTGACGAAATGGGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAAGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACAACACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAACATTATCAAACCGGACCTGCTGCAAGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCC TTCCCGACCAATG CAACAGTCGAGCGGCCGTTTTTCACCGGCAGAATGCACACGGCGGGCCGGTACGGTGGGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAGCAGACTCTTCTACTACAAACATGCCGAGCGGTTGGGTGCCCAGTTTCTGCGCCTACCGTACGACTCTAACCAGCTGTCGATGATCGTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAGCTACTGTCCCGGCTTACGGCCGATGCGGTCCACGAAACGCTGGCCGACATGTCCGAGGAGGAGGTCGAAATCGAGCTGCCCCGCTTTACGATGACTTATTCGAGCTCGTTGCGCGAATGTCTGC                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL BM595003             [                ccgGCTG GACGAAAT GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCAGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTTACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAGCATCATCAAACCGGACCTGCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCCTGGTCCATCCCC TTCCCGACCAATG CGACGGTCGAGCGGCCGTTCTTCAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL BM632944             [                             AAT GGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCAGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTTACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGCTAAAACACGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL BX606263             [                                         TCCACGGTCGACGATGGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGACGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCTGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAATGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAGCATCATCAAACCGGACCTCCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCTTGGTCCATCCCC TTCCCAACCAATG CGACGGTCGAGCGGCCGTTCTTCACCGGCAGAATGCACACGGCGGGCCGGTACGGT GGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAGC GGATCTTCTACTACAAACATGCCGAGCAGTTGGGCGCCCAGTTTCTGCGCCTACCGTACGACTCCAACCAGCTGTCGATGATCGTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAGCTACTGTCCCGGCTTACGGCCGATGCGGTCCACGAAACGCTGGCCGACATGTCTGAGGAAGAGGTCGAAATCGA                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL BX627792             [                                                                                                                                                                                                                  GCCGGGCAATGCAGTGATTTCACCGCTCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAACATCATCAAACCGGACCTGCTGCAGGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCC TTCCCGACCAATG CAACGGTCGAGCGGCCGTTCTTCACCGGCAGAATGCACACGGCGGGCCGGTACGGT GGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAGC GAATCTTCTACTACAAACATGCCGAGCGGTTGGGTGCCCAGTTTCTGCGCCTACCGTACGACTCTAACCAGCTGTCGATGATCGTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CNS08MSP             [                                                                                                                                                                                                                                                                                                                                                                            CTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACAACACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGC AAAACACGCGCGGCAAGATTCAGAACATTATCAAACCGGACCTGCTGCAAGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCC TTCCCGACCAAAGCCAACAGTCGAGCGGCCGTTTTTCACCGGCAGAATGCACACGGCGGGCCGGTACGGT GGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAGC GAATCTTCTACTACAAACATGCCGAGCGGTTGGGTGCCCAGTTTCTGCGCCTACCGTACGACTCTAACCAGCTGTCGATGATCGTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAGCTACTGTCCCGGCTTACGGCCGATGCGGTCCACGAAACGCTGGCCGACATGTCCGAGGAGGAGGTCGAAATCGAGCTGCCCCGCTTTACGATGACTTATTCGAGCTCGTTGCGCGAATGTCTGCAGCAGCTGGGCGTCTCGCGGGTCTTCACCGACCAGGCAGAGTTGCCGCTGATTTCGCGAGGTCGCACCACCCCGCTGAAGGTTAGCACGATACTGCAGAAGAGCTGCATTCTGGTCGACGAGCAGGGGACGGAAGCGTCGGCGGCGACCGAGGGCACGCTGGTGTTTACCATTCTCAACCAACCGGTCAAGTTCATTGCCAACCGGCCGTTCCTCTTCCTGATCTACGACGAAAGCAAGGGCAACTGGCTGTTTGCCGGCAAGGTGGAAGATCCACAAACGTAAGCGGGCGACAAACAGTGACCAAACAACAGAGCTTCTTGTATGAGCAGTATCAATAAAGAT]
[-] EMBL CNS09GQ7             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTTCTGCAGCAGCTGGGCGTTTCGCGGGTCTTCACCGACCAGGCAGAGTTGCCGCTGTTTTCGCGAGGTCGCACCACCCCGCTGAAGGTTAGCACGAAACTGCAGAAGAGCTGCATTTTGGTCGACGAGCAGGGGACGGAAGCGTCGGCGGCGACCGAGGGCACGCTGGTGTTTACCATTCTCAACCAACCGGTCAAGTTCATTGCCAACCGGCCGTTCCTCTTCCTGATCTACGACGAAAGCAAGGGCAACTGGCTGTTTGCCGGCAAGGTGGAAGATCCACAAACGTAAGCGGGCGACAAACAGTG                                           ]




>consensus_9179#0
CCGTTGGCAGATCGTTCGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGATGGGCAG
CGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAA
ATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCGATTGGA
GCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCG
TTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGGAGCGTG
AACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATC
TGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACG
ACACCACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCA
CGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGA
TCGCGCAAAACACGCGCGGCAAGATTCAGAACATCATCAAACCGGACCTGCTGCAGGACG
CACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCCTTCCCGA
CCAATGCGACGGTCGAGCGGCCGTTCTTCACCGGCAGAATGCACACGGCGGGCCGGTACG
GTGGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAGCGAATCTTCTACTACAAACATG
CCGAGCGGTTGGGTGCCCAGTTTCTGCGCCTACCGTACGACTCTAACCAGCTGTCGATGA
TCGTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAGCTACTGTCCCGGCTTACGGCCG
ATGCGGTCCACGAAACGCTGGCCGACATGTCCGAGGAGGAGGTCGAAATCGAGCTGCCCC
GCTTTACGATGACTTATTCGAGCTCGTTGCGCGAATGTCTGCAGCAGCTGGGCGTCTCGC
GGGTCTTCACCGACCAGGCAGAGTTGCCGCTGATTTCGCGAGGTCGCACCACCCCGCTGA
AGGTTAGCACGATACTGCAGAAGAGCTGCATTCTGGTCGACGAGCAGGGGACGGAAGCGT
CGGCGGCGACCGAGGGCACGCTGGTGTTTACCATTCTCAACCAACCGGTCAAGTTCATTG
CCAACCGGCCGTTCCTCTTCCTGATCTACGACGAAAGCAAGGGCAACTGGCTGTTTGCCG
GCAAGGTGGAAGATCCACAAACGTAAGCGGGCGACAAACAGTGACCAAACAACAGAGCTT
CTTGTATGAGCAGTATCAATAAAGAT

consensusID : consensus_9179#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 799
fasta sequence

                              [AGGCAGAATCGGCACGTAGGTTCGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGACGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCTGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCCGGCGGCCGAAATCAATGCGTGGATCGCGCAAAACACGCGCGGCAAGATTCANGAGCATCATCAAACCGGACCTCCTGCAGGACGCACCTGACTGATGCTGATCAANCACGATCTTACTTTCAAAGGGGTTCTNTGGGTCCCAATCCCCTTTTGCCCAAGGCGAATGGCGACACGGGTTCGAAGCGGGGCCGGTTGNCTTTCACCCGGGCAGAATTGGCGCAACTGGCGGACCGGTACGGNGGGACCGAGGTCCCGTATCCTTTTCATGAAGGCAA]

[+] EMBL BX468418             [AGGCAGAATCGGCACGTAGGTTCGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGATGGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGACGTGGAATGATGATTTCGATTGGAGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGCTCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCTGAGACGGAGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAGACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCTTCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCCGGCGGCCGAAATCAATGCGTGGATCGCGCAAAACACGCGCGGCAAGATTCANGAGCATCATCAAACCGGACCTCCTGCAGGACGCACCTGACTGATGCTGATCAANCACGATCTTACTTTCAAAGGGGTTCTNTGGGTCCCAATCCCCTTTTGCCCAAGGCGAATGGCGACACGGGTTCGAAGCGGGGCCGGTTGNCTTTCACCCGGGCAGAATTGGCGCAACTGGCGGACCGGTACGGNGGGACCGAGGTCCCGTATCCTTTTCATGAAGGCAA]




>consensus_9179#1
AGGCAGAATCGGCACGTAGGTTCGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGAT
GGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTT
TACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGACGTGGAATGATGATTTCG
ATTGGAGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGC
TCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCTGAGACGG
AGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAG
ACGATCTGCTGCAGTACAAGCAACAGCAGCAACAAAACCTGCTCATTACCGATCGCATCT
TCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACA
ATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCCGGCGGCCGAAATCAAT
GCGTGGATCGCGCAAAACACGCGCGGCAAGATTCANGAGCATCATCAAACCGGACCTCCT
GCAGGACGCACCTGACTGATGCTGATCAANCACGATCTTACTTTCAAAGGGGTTCTNTGG
GTCCCAATCCCCTTTTGCCCAAGGCGAATGGCGACACGGGTTCGAAGCGGGGCCGGTTGN
CTTTCACCCGGGCAGAATTGGCGCAACTGGCGGACCGGTACGGNGGGACCGAGGTCCCGT
ATCCTTTTCATGAAGGCAA

consensusID : consensus_9179#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 605
fasta sequence

                              [AGAATCCCGAGGTATCTGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGATNGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGGACGTGGAATGATGATTTCGATTGGGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGTCTCCGTAAAGCCTGTGGGGCTACTGTACGAAGGTTCGGAGCCGATCTTGAGAGGAGCGTTAACATCCAAGNAAGCACGTCNCACGCGGGNAATATCCGAGTGCCCGGTCCCCAAGCTTGCGAGGAACGAATCTTGCGTTGCGAGGTACCAAAGCGAACCAAGAGGAGAGCAAACACAAAAAACCCTTCTTCATTAACCGANTTCGGCATTCTTTCCTTACCGAAGACACNACCAGTGGTTCAAAGCTACCCTCCCCAACNAAGGTAATTTACCAGGGNTCAATTTGGCGTGGGTNCNGCGTACAAATTGGCACCGCAAGCCAGANAATTGTTGGGNGCTTCACAGGACACAGCNACATACCANGCGAGAG]

[+] EMBL AL697351             [AGAATCCCGAGGTATCTGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGATNGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGGAGGTTTTTACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGGACGTGGAATGATGATTTCGATTGGGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGTCTCCGTAAAGCCTGTGGGGCTACTGTACGAAGGTTCGGAGCCGATCTTGAGAGGAGCGTTAACATCCAAGNAAGCACGTCNCACGCGGGNAATATCCGAGTGCCCGGTCCCCAAGCTTGCGAGGAACGAATCTTGCGTTGCGAGGTACCAAAGCGAACCAAGAGGAGAGCAAACACAAAAAACCCTTCTTCATTAACCGANTTCGGCATTCTTTCCTTACCGAAGACACNACCAGTGGTTCAAAGCTACCCTCCCCAACNAAGGTAATTTACCAGGGNTCAATTTGGCGTGGGTNCNGCGTACAAATTGGCACCGCAAGCCAGANAATTGTTGGGNGCTTCACAGGACACAGCNACATACCANGCGAGAG]




>consensus_9179#2
AGAATCCCGAGGTATCTGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGATNGGCAG
CGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGGAGGTTTTTACAA
AATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGGACGTGGAATGATGATTTCGATTG
GGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGTCTCCG
TAAAGCCTGTGGGGCTACTGTACGAAGGTTCGGAGCCGATCTTGAGAGGAGCGTTAACAT
CCAAGNAAGCACGTCNCACGCGGGNAATATCCGAGTGCCCGGTCCCCAAGCTTGCGAGGA
ACGAATCTTGCGTTGCGAGGTACCAAAGCGAACCAAGAGGAGAGCAAACACAAAAAACCC
TTCTTCATTAACCGANTTCGGCATTCTTTCCTTACCGAAGACACNACCAGTGGTTCAAAG
CTACCCTCCCCAACNAAGGTAATTTACCAGGGNTCAATTTGGCGTGGGTNCNGCGTACAA
ATTGGCACCGCAAGCCAGANAATTGTTGGGNGCTTCACAGGACACAGCNACATACCANGC
GAGAG

consensusID : consensus_9179#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 397
fasta sequence

                              [CAGTAACGTTGGCAGATCGTTCGAGCTGGACGAAATGGGCATCTTCTACGACAACACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGCAAAACACGCGCGGCAAGATTCAGAACATTATCAAACCGGACCTGCTGCAAGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCCTTCCCGACCAATGCAACAGTCGAGCGGCCGTTTTTCACCGGCAGAATGCACACGGCGGGCCGGTACGTGGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAACAAAATCTTC]

[+] EMBL CNS09GQ6             [CAGTAACGTTGGCAGATCGTTCGAGCTGGACGAAATGGGCATCTTCTACGACAACACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGCAAAACACGCGCGGCAAGATTCAGAACATTATCAAACCGGACCTGCTGCAAGACGCACTGATGATGCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCCTTCCCGACCAATGCAACAGTCGAGCGGCCGTTTTTCACCGGCAGAATGCACACGGCGGGCCGGTACGTGGACCGCGGTCCGTTCCTTTCATGAAGCAGCGCGAACAAAATCTTC]




>consensus_9179#3
CAGTAACGTTGGCAGATCGTTCGAGCTGGACGAAATGGGCATCTTCTACGACAACACGGT
GACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCGCTACAATGCCACGACGCAGAG
TGTGGACTTTCAGGACACGCAGTCGGCGGCGGCCGAAATCAACGCGTGGATCGCGCAAAA
CACGCGCGGCAAGATTCAGAACATTATCAAACCGGACCTGCTGCAAGACGCACTGATGAT
GCTGATCAACACGATCTACTTCAAGGGTTCATGGTCCATCCCCTTCCCGACCAATGCAAC
AGTCGAGCGGCCGTTTTTCACCGGCAGAATGCACACGGCGGGCCGGTACGTGGACCGCGG
TCCGTTCCTTTCATGAAGCAGCGCGAACAAAATCTTC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9179#0      ------CCGTTGGCAGATCGTTCGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGAT 54
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      AGGCAGAATCGGCACGTAGGTTCGAGCTGGACGAAATGGGCATCTTCCACGGTCGACGAT 60
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      GGGCAGCGGTGTTGTGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTT 114
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      GGGCAGCGGTGTTATGCTGTGTGTTTGCGCTGACGATCGCGGCAACTCCAAGGAGGTTTT 120
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      TACAAAATCGCTTCACCGTCGACTACGAACCATTCGCAGGGCCGTGGAATGATGATTTCG 174
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      TACAAAATCGCTTCACCGTCGACTACGAACCGTTCGCAGGGACGTGGAATGATGATTTCG 180
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      ATTGGAGCGTAATAAAGGAGGTACTCCACAAAGCGCCGGGCAATGCGGTGATTTCACCGC 234
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ATTGGAGCGTAATAAAGGAGGTACTTCACAAAGCGCCGGGCAATGCGGTGATTTCACCGC 240
consensus_9179#2      -----------------------------------------AGAATCCCGAGGTATCTGA 19
                                                                                  

consensus_9179#0      TCTCCGTTAAGGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCCGAGACGG 294
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      TCTCCGTTAAAGCCCTGCTGGCGCTACTGTACGAAGGTTCGGCGAGCCGATCTGAGACGG 300
consensus_9179#2      GCTGGACGAAATGGGCATCTTCCACGGTCGACGATNGGCAGCGGTGTTATGCTGTGTGTT 79
                                                                                  

consensus_9179#0      AGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAG 354
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      AGCGTGAACTCCAGCAAGCACTCAGCGGCGGTAATTCGCAGGCCGTTCCCAAGCTGCAAG 360
consensus_9179#2      TGCGCTGACGATCGCGGCAACTCCAAGGGAGGTTTTTACAAAATCGCTTCACCGTCGACT 139
                                                                                  

consensus_9179#0      ACGATCTGCTGCAGTACAAGCAACAGCAGCA-ACAAAACCTGCTCATTACCGATCGCATC 413
consensus_9179#3      -----------------CAGTAACGTTGGCAGATCGTTCGAGCTGGACGAAATGGGCATC 43
consensus_9179#1      ACGATCTGCTGCAGTACAAGCAACAGCAGCA-ACAAAACCTGCTCATTACCGATCGCATC 419
consensus_9179#2      ACGAACCGTT----CGCAGGGGACGTGGAATGATGATTTCGATTGGGCGTAATAAAGGAG 195
                                         *  **        *          *                

consensus_9179#0      TTCTACGACACCACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCG---- 469
consensus_9179#3      TTCTACGACAACACGGTGACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCG---- 99
consensus_9179#1      TTCTACGACACCACGGTCACGCTCCTCCAGAAGTATCACAGCATCATTGCGGCTCG---- 475
consensus_9179#2      GTACTTCACAAAGCGCCG--GGCAATGCGGTGATTTCACCGTCTCCGTAAAGCCTGTGGG 253
                       *     ***   **     *    * * *   * **** *  **  *   **  *    

consensus_9179#0      -CTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGC--GGCGGCCGA 526
consensus_9179#3      -CTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGC--GGCGGCCGA 156
consensus_9179#1      -CTACAATGCCACGACGCAGAGTGTGGACTTTCAGGACACGCAGTCGGCC-GGCGGCCGA 533
consensus_9179#2      GCTACTGTACGAAGGTTCGGAGC-CGATCTTGAGAGGAGCGTTAACATCCAAGNAAGCAC 312
                       ****  * * * *   * ***   *  ***    *   **    *  *   *    *  

consensus_9179#0      AATCAACGCGTGGATCGCGCAAA-ACACGCGCGGCAAGATTCAGAA-CATCA-TCAAACC 583
consensus_9179#3      AATCAACGCGTGGATCGCGCAAA-ACACGCGCGGCAAGATTCAGAA-CATTA-TCAAACC 213
consensus_9179#1      AATCAATGCGTGGATCGCGCAAA-ACACGCGCGGCAAGATTCANGAGCATCA-TCAAACC 591
consensus_9179#2      GTCNCACGCGGGNAATATCCGAGTGCCCGGTCCCCAAGCTTGCGAGGAACGAATCTTGCG 372
                           * *** * *     * *   * **  *  **** **       *  * **   * 

consensus_9179#0      GGACCTGCTGC-AGGACGCAC-TGA-TGATGCTGATCAAC-ACGATCT-ACTTC---AAG 635
consensus_9179#3      GGACCTGCTGC-AAGACGCAC-TGA-TGATGCTGATCAAC-ACGATCT-ACTTC---AAG 265
consensus_9179#1      GGACCTCCTGC-AGGACGCACCTGACTGATGCTGATCAANCACGATCTTACTTTCAAAGG 650
consensus_9179#2      TTGCGAGGTACCAAAGCGAACCAAGAGGAGAGCAAACACAAAAAACCCTTCTTCATTAAC 432
                         *    * * *   ** **      **     * **   *  * *   ***    *  

consensus_9179#0      GGTTC-ATGG--TCCATCCCCTTCCCGACCAATGCGACGGTCGAG--------------- 677
consensus_9179#3      GGTTC-ATGG--TCCATCCCCTTCCCGACCAATGCAACAGTCGAG--------------- 307
consensus_9179#1      GGTTCTNTGGGTCCCAATCCCCTTTTGCCCAAGGCGAATGGCGACACGGGTTCGAAGCGG 710
consensus_9179#2      CGANT-TCGGCATTC-TTTCCTTACCGAAGACACNACCAGTGGTTCAAAGCTACCCTCCC 490
                       *      **    *    ** *   *   *        *  *                 

consensus_9179#0      ---CGGCCGTTCTTCACC--GGCAGAAT----GCACACGGCGGGCCGGTACGGTGG-ACC 727
consensus_9179#3      ---CGGCCGTTTTTCACC--GGCAGAAT----GCACACGGCGGGCCGGTACG-TGG-ACC 356
consensus_9179#1      GGCCGGTTGNCTTTCACCCGGGCAGAATTGGCGCAACTGGCGGACCGGTACGGNGGGACC 770
consensus_9179#2      CAACNAAGGTAATTTACCAGGGNTCAATTTG-GCGTGGGTNCNGCGTACAAATTGGCACC 549
                         *    *   ** ***  **   ***    **    *     *    *    ** ***

consensus_9179#0      GCGGTCC---GTTCCTTTCATGAAG-CAGCGCGAGCGAA-TCTTCTACTACAAACATGCC 782
consensus_9179#3      GCGGTCC---GTTCCTTTCATGAAG-CAGCGCGAACAAAATCTTC--------------- 397
consensus_9179#1      GAGGTCCCGTATCCTTTTCATGAAGGCAA------------------------------- 799
consensus_9179#2      GCAAGCCAGANAATTGTTGGGNGCTTCACAGGACACAGCNACATACCANGCGAGAG---- 605
                      *    **         **        **                                

consensus_9179#0      GAGCGGTTGGGTGCCCAGTTTCTGCGCCTACCGTACGACTCTAACCAGCTGTCGATGATC 842
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      GTGGTGCTGCCGGATGAGCAGGTTTCGCTGGGGCAGCTACTGTCCCGGCTTACGGCCGAT 902
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      GCGGTCCACGAAACGCTGGCCGACATGTCCGAGGAGGAGGTCGAAATCGAGCTGCCCCGC 962
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      TTTACGATGACTTATTCGAGCTCGTTGCGCGAATGTCTGCAGCAGCTGGGCGTCTCGCGG 1022
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      GTCTTCACCGACCAGGCAGAGTTGCCGCTGATTTCGCGAGGTCGCACCACCCCGCTGAAG 1082
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      GTTAGCACGATACTGCAGAAGAGCTGCATTCTGGTCGACGAGCAGGGGACGGAAGCGTCG 1142
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      GCGGCGACCGAGGGCACGCTGGTGTTTACCATTCTCAACCAACCGGTCAAGTTCATTGCC 1202
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      AACCGGCCGTTCCTCTTCCTGATCTACGACGAAAGCAAGGGCAACTGGCTGTTTGCCGGC 1262
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      AAGGTGGAAGATCCACAAACGTAAGCGGGCGACAAACAGTGACCAAACAACAGAGCTTCT 1322
consensus_9179#3      ------------------------------------------------------------
consensus_9179#1      ------------------------------------------------------------
consensus_9179#2      ------------------------------------------------------------
                                                                                  

consensus_9179#0      TGTATGAGCAGTATCAATAAAGAT 1346
consensus_9179#3      ------------------------
consensus_9179#1      ------------------------
consensus_9179#2      ------------------------