|
These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9182#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1150 fasta sequence
[TTGAACGCATATGGCGCATCGGACGTTTAATCCCGACCGATGCACACATTCTTGAGTGCCTACTAATTACCAAAGTCTCATTTAGTTAACTACAGTGGCCGTCCGCGAAGGTGCCCGGGTCATCCGACGCACTGGGCGGTCGCTGTGCATAATGACGTGCTTGGTCCCCGTCTGCGGGTCCTCGGGCGTTGAAAGTGGACACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTGTTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCGTTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTATCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCGAATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGTCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCGCACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAACGTAATAAACATCTGATGAAAACATCTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCGGGGG]
[+] EMBL CNS09CHT [TTGAACGCATATGGCGCATCGGACGTTTAATCCCGACCGATGCACACATTCTTGAGTGCCTACTAATTACCAAAGTCTCATTTAGTTAACTACAGTGGCCGTCCGCGAAGGTGCCCGGGTCATCCGACGCACTGGGCGGTCGCTGTGCATAATGACGTGCTTGGTCCCCGTCTGCGGGTCCTCGGGCGTTGAAAGTGGACACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTGTTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCGTTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTATCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCGAATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGTCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAA CAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCA ]
[-] EMBL CNS09CHU [ GTCTGCGGGTCCTCGGGCGTTGAAAGTGAAAACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTGTTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCGTTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTATCTTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCG ATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGTCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCGCACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAACGTAATAAACATCTGATGAAA ]
[+] EMBL CNS08RWQ [ AGCAAATTGTCCACGAGGGTCTATCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAAGCAGAGCGATTGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCCCGGACAAGGCACGCCGTCTCGGATACAAGGCCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGTGGCCGCAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCGCACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAACGTAATAAACATCTGATGAAAACATCTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCAAATGTGCCCGAGCGGGGG]
[-] EMBL CNS08M8T [ CGGCAAGCCCAAGAGCCATGGTGTCAACCAGCTCAAGCCGTACCGCTCCCTGCAGTCCGTCGCTGAGGAACTTTTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGAACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTTTACTGGTTCTGTAACGCCGTGAACAAGCATCGTGAACTTCGTGTTCTAACTTCCGCTGGAAAGAGTTCGCGTGGTTTGGGCAAGGGCTACCACTACTCCCAGACCATTGGTGGATCCCGTCGCGCCTGCTGGCGTCGTCGT ]
consensusID : consensus_9182#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 736 fasta sequence
[CCGCCCACGCGTCCG-ACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGACCGCCCACGCGTCCG-------CCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG-CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCC]
[+] EMBL BM592026 [CCGCCCACGCGTCCG ACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCAAGACC CCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAA ]
[+] EMBL BM597632 [CCGCCCACGCGTCCGTACAGCCTGAAGACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGAGCATTTTCGAGACC CCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGTCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAAAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACGCCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCGAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGC ]
[+] EMBL BM603179 [ CCGCCCACGCGTCCG CCCAC GCGTCCGCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGATCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCCTCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTGAAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCC]
[+] EMBL BM576196 [ CCGCCCACGCGTCCGCGAGACCCCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTGGTTCAACGGATCCGCTGATGTGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCACCGGTTACCAGAAAAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAG CCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACGCCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGCTGACCGGCGTTGCTCTGCGCTTCCAGGCCGAGTACGACAAGGACTTCATCGACTACGCCTACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGATCGCCTCGGAGACCTACCACT ]
[+] EMBL BM610448 [ CCGCCCACGCGTCCGGACC CCCACTGGATACCCCGAGAACGATAACGACGACTTTATCCATATGCCCCGATGGTTCAACGGATCCGTTGATGAGAACATGGCCTACTCTCGCCTGGTTGATGCCAAGGTTGGCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAAAAGAAGTTCCAGGGATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGAACGTGCAGCCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGTACACCGGATACAAGGACATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCACATTCTGCACGATCGCGCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAG ]
consensusID : consensus_9182#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 607 fasta sequence
[GGTTAGTGGATTGCGTACACGGCAAAACCGACTACAGCCCCGCACGCCCGGCTGCGCCCCGTCCGTGCTGATTATGTTCATCAATATGATGCTGTTTAAAAACTCCGAACCCTTCCACGGCTGCGACGAGTTCATGTTCGAGGGCCAGAACGAGCTGCAGCGCACGTTCGTGTTCATTGCGCTGNTCTGCATTCCCTGGATTGCTGCTCGGCAAGCCGTTCTATTTGATGTTCAAGCGCAAGAACGNGTTCGCGAACCAATCCCGAACAATGGCGACGTACACCAGTGCGGTGACGCTGAACCAATTCCTACCAGCCGAAACACACGATTCGCACGACGATGAGCCGATTGGCGGNAATCTTCATCCATCAGGCATTCACACGATCGAGTACGTGCTCAGTACCGTGTCAGCACACTGGNGTCTAACTGCGGTACTGTGGGGCTCTGTCCCTTGCCATGNCCCAACTGTCCGAAGGTGCTGTGGAACATGGTGCTAGTCGATGGGGCTTGAAGCAAAACCTCCTTACAAAGGGTTGCCATCATTGCCTGTACTTATGTCTNTNTGGCGCCTGGTACCCTGTNTACGCTCGCCATTACTCGTCNCATG]
[+] EMBL AL696106 [GGTTAGTGGATTGCGTACACGGCAAAACCGACTACAGCCCCGCACGCCCGGCTGCGCCCCGTCCGTGCTGATTATGTTCATCAATATGATGCTGTTTAAAAACTCCGAACCCTTCCACGGCTGCGACGAGTTCATGTTCGAGGGCCAGAACGAGCTGCAGCGCACGTTCGTGTTCATTGCGCTGNTCTGCATTCCCTGGATTGCTGCTCGGCAAGCCGTTCTATTTGATGTTCAAGCGCAAGAACGNGTTCGCGAACCAATCCCGAACAATGGCGACGTACACCAGTGCGGTGACGCTGAACCAATTCCTACCAGCCGAAACACACGATTCGCACGACGATGAGCCGATTGGCGGNAATCTTCATCCATCAGGCATTCACACGATCGAGTACGTGCTCAGTACCGTGTCAGCACACTGGNGTCTAACTGCGGTACTGTGGGGCTCTGTCCCTTGCCATGNCCCAACTGTCCGAAGGTGCTGTGGAACATGGTGCTAGTCGATGGGGCTTGAAGCAAAACCTCCTTACAAAGGGTTGCCATCATTGCCTGTACTTATGTCTNTNTGGCGCCTGGTACCCTGTNTACGCTCGCCATTACTCGTCNCATG]
consensusID : consensus_9182#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 580 fasta sequence
[CGAGTAGAGTCGTTCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCAAAGAAGGCCCCATCCTCGGTCTTCGTTCTCTTCTCCCAGAAGCAGATCGCCGAATTCAAAGAGGCTTTCGCGCTAATCGACACCAACGGCAAGATCGATGGCGAGAAGTTCCGCTTCGCCCTGACCCACTGGGGCCAGGACAAGTTCACCGAGGACGAGGTTGACGATGCATTCGATCAGATGGTCATTGACGATAAGGGCTACATCGACACTGCTGCTCTGATCGGCATGCTCACCGGATCCGAGGAGGGAGAGGAAGAATAAATTTTATAATTAAAAGCCAAAAACAAAACCAAAAAACTAACCTAAAAAAAATCTAAACAATGAATTCTGTTTATTTTGTATAACTAAAAAAAAAAAAAGGCCACATGTGCCCGAGCGG]
[+] EMBL CNS08G00 [CGAGTAGAGTCGTTCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCAAAGAAGGCCCCATCCTCGGTCTTCGTTCTCTTCTCCCAGAAGCAGATCGCCGAATTCAAAGAGGCTTTCGCGCTAATCGACACCAACGGCAAGATCGATGGCGAGAAGTTCCGCTTCGCCCTGACCCACTGGGGCCAGGACAAGTTCACCGAGGACGAGGTTGACGATGCATTCGATCAGATGGTCATTGACGATAAGGGCTACATCGACACTGCTGCTCTGATCGGCATGCTCACCGGATCCGAGGAGGGAGAGGAAGAATAAATTTTATAATTAAAAGCCAAAAACAAAACCAAAAAACTAACCTAAAAAAAATCTAAACAATGAATTCTGTTTATTTTGTATAACTAAAAAAAAAAAAAGGCCACATGTGCCCGAGCGG]
consensusID : consensus_9182#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 526 fasta sequence
[CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGTTTGCAACTATTACTGCGCGACACACAGCAAGAGCCTGTGTAAAGAGGCGACTTTTAATTTAGAAGAAAAAAAAAACGCACAAACTTACACACTTAACCGCTCGCTCTCACCAATCCACCAAAACGGATCCGGTGCCGGTCACAGTGTGGCTGGCTGGCCGTGTGCTAAGCCGTACTTTCGCGTCATCGCGTCTAAACGCTCTTCACAGGCCAAGACGACGCGCGCAGCAAACAACGACAAACCCGGCGACAGCGGTGCTGTACTCTCTGCTGACAGTGGTTTACATCATAGTAGGTACTGCATCCTGCGGGACTGATTTTCGGCATGCATTAGTTCATCTAAAAGGCAAACAATTTGAAAAGAAAACAACAATAAGTTTAAACCCTTTCTGTGTGAACTTTGGAAATACGCACGGGGCTACGGAAAGCATGTGAAAGTGTGTTTTTGGAAGTGCTAAAGTTGTGTTGAAACCGAAATCTTTC]
[+] EMBL BM596879 [CCGCGGACGCGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGTTTGCAACTATTACTGCGCGACACACAGCAAGAGCCTGTGTAAAGAGGCGACTTTTAATTTAGAAGAAAAAAAAAACGCACAAACTTACACACTTAACCGCTCGCTCTCACCAATCCACCAAAACGGATCCGGTGCCGGTCACAGTGTGGCTGGCTGGCCGTGTGCTAAGCCGTACTTTCGCGTCATCGCGTCTAAACGCTCTTCACAGGCCAAGACGACGCGCGCAGCAAACAACGACAAACCCGGCGACAGCGGTGCTGTACTCTCTGCTGACAGTGGTTTACATCATAGTAGGTACTGCATCCTGCGGGACTGATTTTCGGCATGCATTAGTTCATCTAAAAGGCAAACAATTTGAAAAGAAAACAACAATAAGTTTAAACCCTTTCTGTGTGAACTTTGGAAATACGCACGGGGCTACGGAAAGCATGTGAAAGTGTGTTTTTGGAAGTGCTAAAGTTGTGTTGAAACCGAAATCTTTC]
consensusID : consensus_9182#5 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 478 fasta sequence
[CGACCCACGCGTCCGGATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGGGGCCGGACAAGGCACGCCGTCTCGGATACAAGGCCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGCGGCCGTAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGTCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCATAACGCTATCCGTCGTGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTT]
[+] EMBL BM654761 [CGACCCACGCGTCCGGATGTGATGCGCTACCTGCTGCGTATCCGCGTTTGGCAGTACCGCCAAATGACCAGATTCCACCGTGCACCGCGTCCGTCGGGGCCGGACAAGGCACGCCGTCTCGGATACAAGGCCAAGCAGGGCTTCTCCATCTTCCGTATTCGTGTCCGTCGTGGCGGCCGTAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGAGTCATGGTGTCAACCAGCTCAAGCCGTACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCCGGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGTACTTTGAGGTCATCATGGTCGATCCCGCCCATAACGCTATCCGTCGTGACCCGAACGTTAACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGAAAGAGTT]
consensusID : consensus_9182#6 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 387 fasta sequence
[ATCGGCACGAGGTNNTGATGGACACATTTCGTGAGGAATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGGCAGTGCAAGAAGGAGCTGAACGGGATNNAAGCCCTCCCGGGCGTGCGAGCGCCCGCGTATGAGGCCGGCGGCTGAAGANCGNTCAACCGTAACGGTTCNGTGGTGTCCTTGTGCCACCACTGTTCTNGCGTTAGCGCATTATCCGGGGCATTTCTGGATTCGAACGAAGGCAGAAAGGNCGTTGAAAGTGCTGGCGCTCAGN]
[+] EMBL BX469659 [ATCGGCACGAGGTNNTGATGGACACATTTCGTGAGGAATAATTCGCCAAAATGGTCCAGCGACTGACGCTTCGACGACGCTTGGTCGTACAACACCAAGTCTAACAAACGCCGTATTGTTCGCACACCAGTGGCCGTCTGGTTTACCAGTACGTGAAGAAACGCCGTACCCTCCCGAAATGCGGGCAGTGCAAGAAGGAGCTGAACGGGATNNAAGCCCTCCCGGGCGTGCGAGCGCCCGCGTATGAGGCCGGCGGCTGAAGANCGNTCAACCGTAACGGTTCNGTGGTGTCCTTGTGCCACCACTGTTCTNGCGTTAGCGCATTATCCGGGGCATTTCTGGATTCGAACGAAGGCAGAAAGGNCGTTGAAAGTGCTGGCGCTCAGN]
consensusID : consensus_9182#7 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 199 fasta sequence
[CCGCCCACGCGTCCGCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCA]
[+] EMBL BM624584 [CCGCCCACGCGTCCGCTAATCTAACCAGCTAAGCACCATGTCTGAGAAGGAGAAGAAGGTCAAGAAGAAGAAGGCGTCGTCCAAGGATGACACCCCAGCAGATACCCCTGGAGCAGACACCCCGGCGGCACCGACCCCCTCGGACTCTGCGGCCGGCTCGCAGCGCGGCTCGACCCGCGGCTCGTCGTCCCGCAAGGCA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 TTGAACGCATATGGCGCATCGGACGTTTAATCCCGACCGATGCACACATTCTTGAGTGCC 60
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ------------------------------------------------------------
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 TACTAATTACCAAAGTCTCATTTAGTTAACTACAGTGGCCGTCCGCGAAGGTGCCCGGGT 120
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ------------------------------------------------------------
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 CATCCGACGCACTGGGCGGTCGCTGTGCATAATGACGTGCTTGGTCCCCGTCTGCGGGTC 180
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ------------------------------------------------------------
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 CTCGGGCGTTGAAAGTGGACACTCTCGAGCGTATGTTGGATGCGTTTCGTGTTGGTGGTG 240
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ------------------------------------------------------------
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 TTTGATGCGTAGGGCTTGTGGTGTGTGTCAAGCCGCATGGTTCGAACTAATGCTACGTCG 300
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ----------------------------------CCGCCCACGCGTCCGACAGCCTGAAG 26
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 TTCCCGATGGCCACCGGCAGTCTACTCTCCCTTTTTCAGCAAATTGTCCACGAGGGTCTA 360
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ACCCCGACTCTGATGAAGTTCGAGTTCGAGGCCTCTGCCACCACCTACCCGACCGCCCAC 86
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ----------------------------------------------------CGAGTAGA 8
consensus_9182#7 ---------------------------------------------------CCGCCCACG 9
consensus_9182#0 TCCTCACACGAGTTGAAACATGGGGGCATATCGATACGTCCAGGAGCTGTACCGCAAAAA 420
consensus_9182#5 ----------------------------------------------------CGACCCAC 8
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 GCGTCCGCCCACTGGATACCCCGAGAAGGAGAACGACGACTTTATCCATATGCCCCGTTG 146
consensus_9182#2 -------------------------------------------------GGTTAGTGGAT 11
consensus_9182#4 ---------------------------------------------------CCGCGGACG 9
consensus_9182#3 GTCGTTCTAATCTAACCAGCTAAGCAC---CATGTCTGAGAAGGAGAAG----AAGGTCA 61
consensus_9182#7 CGTCCGCTAATCTAACCAGCTAAGCAC---CATGTCTGAGAAGGAGAAG----AAGGTCA 62
consensus_9182#0 GCAGAGCGAATGTGATGCGCTACCTGCTG-CGTATCCGCGTTTGGCAGT----ACCGCCA 475
consensus_9182#5 GC-GTCCGGATGTGATGCGCTACCTGCTG-CGTATCCGCGTTTGGCAGT----ACCGCCA 62
consensus_9182#6 -----ATCGGCACGAGGTNNTGATGGA---CACATTTCGTGAGGAATAA----TTCGCCA 48
consensus_9182#1 GTTCAACGGATCCGCTGATGTGAACATGG-CCTACTCTCGCCTGGTTGATGCCAAGGTTG 205
consensus_9182#2 TGCGTACACGGCAAAACCGACTACAGCCC-CGCACGCCCGGCTGCGCCCCGTCCGTGCTG 70
consensus_9182#4 CGTGGGCGGACGCGTGGGCGGACGCGTGGGTGCGTTTGCAACTATTACTGCGCGACACAC 69
consensus_9182#3 AG-AAGAAGAAGGCGTCGTCCAAGG-----ATGACACC--CCAGCAGAT--ACCCCTGGA 111
consensus_9182#7 AG-AAGAAGAAGGCGTCGTCCAAGG-----ATGACACC--CCAGCAGAT--ACCCCTGGA 112
consensus_9182#0 AATGACCAGATTCCACCGTGCACCGCGTCCGTCGCGCC--CGGACAAGG--CACGCCGTC 531
consensus_9182#5 AATGACCAGATTCCACCGTGCACCGCGTCCGTCGGGGC--CGGACAAGG--CACGCCGTC 118
consensus_9182#6 AA-----ATGGTCCAGCGACTGACGCTTCGACGACGCT--TGGTCGTAC--AACACCAAG 99
consensus_9182#1 GCTTCATTACGCCCTTCGACCACCAGCGTTATGTCGCCGGTTACCAGAAGAAGTTCCAGG 265
consensus_9182#2 AT----TATGTTCATCAATATGATGCTGTTTAAAAACTC-CGAACCCTTCCACGGCTGCG 125
consensus_9182#4 AG----CAAGAGCCTGTGTAAAGAGGCGACTTTTAATT---TAGAAGAAAAAAAAAACGC 122
consensus_9182#3 GCAGACACCCCGGCGGCACCGACCCC--CTCGGACTCTGCGGCCG-GCTCGCAGCGCGGC 168
consensus_9182#7 GCAGACACCCCGGCGGCACCGACCCC--CTCGGACTCTGCGGCCG-GCTCGCAGCGCGGC 169
consensus_9182#0 TCGGATACAAGGTCAAGCAGGGCTTC--TCCATCTTCCGTATTCGTGTCCGTCGTGGTGG 589
consensus_9182#5 TCGGATACAAGGCCAAGCAGGGCTTC--TCCATCTTCCGTATTCGTGTCCGTCGTGGCGG 176
consensus_9182#6 TCTAACAAAC--GCCGTATTGTTCGC--ACACCAGTGGCCGTCTGGTTTACCAGTACGTG 155
consensus_9182#1 GATACCTGCCATTCAGCTTCGACTTTGGCTTCGACTTTGAGAACAACGACTTTGAAGTGA 325
consensus_9182#2 ACGAGTTCATGTTCGAGGGCCAGAACGAGCTGCAGCGCACGTTCGTGTTCATTGCGCTGN 185
consensus_9182#4 ACAAACTTACACACTTAACCGCTCGCTCTCACCAATCCACCAAAACGGATCCGGTGCCGG 182
* *
consensus_9182#3 TCGACCCGCGGCTCGTCGTCCCGCAAGGCAAAGAAGGCCCCATCCTCG-GTCTTCGTTCT 227
consensus_9182#7 TCGACCCGCGGCTCGTCGTCCCGCAAGGCA------------------------------ 199
consensus_9182#0 CCG-CAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGA-GCCATGGTGTC 647
consensus_9182#5 CCG-TAAACGCCCGGTCCCCAAGGGTTGCACGTACGGCAAGCCCAAGA-GTCATGGTGTC 234
consensus_9182#6 AAG--AAACGCCGTACCCTCCCGAAATGCGGGCAGTGCAAGAAGGAGCTGAACGGGATNN 213
consensus_9182#1 ACGTGCAGCCGCTGGAGCCCAAGAAGGACGTGCTACTCTTCCACATGAGCTCGTGGCCGT 385
consensus_9182#2 TCT--GCATTCCCTGGATTGCTGCTCGGCAAGCCGTTCTATTTGATGTTCAAGCGCAAGA 243
consensus_9182#4 TCACAGTGTGGCTGGCTGGCC-GTGTGCTAAGCCGTACTTTCGCGTCA--TCGCGTCTAA 239
* *
consensus_9182#3 C-TTCTCCCAGAAGCA-GATCGCCGAATTCAAAGAGGCTTTCGCGCTAATCGACACCAAC 285
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 A-ACCAGCTCAAGCCG-TACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCC 705
consensus_9182#5 A-ACCAGCTCAAGCCG-TACCGCTGCCTGCAGTCCGTCGCTGAGGAACGTGTCGGTCGCC 292
consensus_9182#6 A-AGCCCTCCCGGGCG-TGCGAGCGCCCGCGTATGAGGCCGGCGGCTGAAGANCGNT--C 269
consensus_9182#1 ACACCGGATACAAGGA-CATCGCCGATCTGCGCCCGATGGCCGAGCAGCCGAGCGTGCAC 444
consensus_9182#2 ACGNGTTCGCGAACCAATCCCGAACAATGGCGACGTACACCAGTGCGGTGACGCTGAACC 303
consensus_9182#4 ACGCTCTTCACAGGCCAAGACGACGCGCGCAG-CAAACAACGACAAACCCGGCGACAGCG 298
consensus_9182#3 GGCAAGATCGATGGCGAGAAGTTCCGCTTCGCCCTGACCCACTGGGGCCAGG--ACAAGT 343
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 GGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGT 765
consensus_9182#5 GGCTGGGAGGTCTGCGCGTGCTGAACTCGTACTGGGTTGCTCAGGACGCTGCCCATAAGT 352
consensus_9182#6 AACCGTAACGGTTCN--GTGGTGTCCTTGTGCCACCACTGTTCTNGCGTTAG---CGCAT 324
consensus_9182#1 ATTCTGCACGATCGC--GCCCAAACCACCAAGTCGTTCGAGCAGTCGTTCGGTCAGTCGC 502
consensus_9182#2 AATTCCTACCAGCCGAAACACACGATTCGCACGACGATGAGCCGATTGGCGGNAATCTTC 363
consensus_9182#4 GTGCTGTACTCTCTGCTGACAGTGGTTTACATCATAGTAGGTACTGCATCCTGCGGGACT 358
consensus_9182#3 TCAC-CGAGGACGAGGTTGACGATGCATTCGATCAGATGGTCATTGACGATAAGGGC-TA 401
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 ACTT-TGAGGTCATCATGGTCGATCCCGCCCACAACGCCATCCGTCGCGACCCGAACGTT 824
consensus_9182#5 ACTT-TGAGGTCATCATGGTCGATCCCGCCCATAACGCTATCCGTCGTGACCCGAACGTT 411
consensus_9182#6 TATC-CGGGGCATTTCTGGATTCGAACGAAGGCAGAAAGGNCGTTGAAAGTGCTGGCGCT 383
consensus_9182#1 TGAC-CGGCGTTGCTCTGCGCTTCCAGGCCAAGTACGACAAGGACTTCATCGACTACGCC 561
consensus_9182#2 ATCCATCAGGCATTCACACGATCGAGTACGTGCTCAGTACCGTGTCAGCACACTGGNGTC 423
consensus_9182#4 GATTTTCGGCATGCATTAGTTCATCTAAAAGGCAAACAATTTGAAAAGAAAACAACAATA 418
consensus_9182#3 CATCGACACTGCTGCTCTGATCGGCATGCTCACCGGATCCGAGGAGGGAGAG--GAAGAA 459
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 AACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGA 884
consensus_9182#5 AACTGGATCTGTAACGCCGTGCACAAGCATCGTGAACTTCGTGGTCTCACTTCCGCTGGA 471
consensus_9182#6 CAGN-------------------------------------------------------- 387
consensus_9182#1 TACCTGATGAAGCACATTGAGCAGCACGACTACTGGTCTGCGCTGGTCTATCCGTTCGCC 621
consensus_9182#2 TAACTGCGGTACTGTGGGGCTCTGTCCCTTGCCATGNCCCAACTGTCCGAAGGTGCTGTG 483
consensus_9182#4 AGTTTAAACCCTTTCTGTGTGAACTTTGGAAATACGCACGGGGCTACGGAAAGCATGTGA 478
consensus_9182#3 TAAATTTTATAATTAAAAGCCAAAAACAAAACCAAAAAACTAACCTAAAAAAAATCTAAA 519
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 AAGAGTTCGCGTGGTTTGGGCAAGGGCTACCGCTACTCCCAGACCATTGGTGGATCCCGT 944
consensus_9182#5 AAGAGTT----------------------------------------------------- 478
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 TCGGAGACCTACCACTACCATCAGTTTAACCTGTACTACGATGCTCAGCGCACCAGCGTG 681
consensus_9182#2 GAACATGGTGCTAGTCGATGGGGCTTGAAGCAAAACCTCCTTACAAAGGGTTGCCATCAT 543
consensus_9182#4 AAGTGTGTTTTTGGAAGTGCTAAAGTTGTGTTGAAACCGAAATCTTTC------------ 526
consensus_9182#3 CAATGAATTCTGTTTATTTTGTATAACTAAAAAAAAAAAAAGGCCACATGTGCCCGAGCG 579
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 CGCGCCTGCTGGCGTCGTCGTAACCGTCTGCACCTGCGACGTTACCGTTAAGATGTGTCG 1004
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 AAGAATGTCAAGTTTGTGCTGCAGCACAAGCAGGCCGACTACGACCAGGACTTCC----- 736
consensus_9182#2 TGCCTGTACTTATGTCTNTNTGGCGCCTGGTACCCTGTNTACGCTCGCCATTACTCGTCN 603
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 G----------------------------------------------------------- 580
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 CACTTTAGTGTGGCAGGCATGGTGGATTTTTGAAACGCAAGTTGTAATTTCTATCCACAA 1064
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ------------------------------------------------------------
consensus_9182#2 CATG-------------------------------------------------------- 607
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 ------------------------------------------------------------
consensus_9182#7 ------------------------------------------------------------
consensus_9182#0 CGTAATAAACATCTGATGAAAACATCTAAATGTAAAAAAAAAAAAAAAAAAAAAAAAAAA 1124
consensus_9182#5 ------------------------------------------------------------
consensus_9182#6 ------------------------------------------------------------
consensus_9182#1 ------------------------------------------------------------
consensus_9182#2 ------------------------------------------------------------
consensus_9182#4 ------------------------------------------------------------
consensus_9182#3 --------------------------
consensus_9182#7 --------------------------
consensus_9182#0 AAAGGCCAAATGTGCCCGAGCGGGGG 1150
consensus_9182#5 --------------------------
consensus_9182#6 --------------------------
consensus_9182#1 --------------------------
consensus_9182#2 --------------------------
consensus_9182#4 --------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||