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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9187#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 10 consensus length = 1425 fasta sequence
[TTTGTTTTTAGCCGGAAAAGCACAACGGCAGCTCG-TGGCAGCTGAACAGTTCGAATTTATTTCGTATTGTCTTAGTTTTGGACCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGC-GGCTGCCTTGTAATTACACCGCAGG-AGAATTGGAAATG-AGTCTCAGTCGTGAAACGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCG-TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCG-ATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAA-CGCC-GGAGGAGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATATAAAGAGCAATCGAATAAATTTAAGCTGAAAACGTAAAAAAAAAAAA]
[+] EMBL CNS08Z6T [TTTGTTTTTAGCCGGAAAAGCACAACGGCAGCTCG TGGCAGCTGAACAGTTCGAATTTATTTCGTATTGTCTTAGTTTTGGACCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGCGGGCTGCCTTGTAATTACACCGCAGG AGAATTGGAAATG AGTCTCAGTCGTGAAACGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCG TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCG ATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAA CGCC GGAGGAGGCAGACGGCAGTTTCATGCGG ]
[+] EMBL CNS08S1G [ TTTTTAGCCGGAAAAGCACAACGGCAGCTCGCTGGCAGCTGAACAGTTCGAATTTATTTCGTATTGTCTTAGTTTTGGACCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGC GGCTGCCTTGTAATTACACCGCAGG AGAATTGGAAATG AGTCTCAGTCGTGAAACGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCG TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCG ATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAA CGCC GGAGGAGGCAGACGGCAGTATCATGCGG ]
[+] EMBL CNS08H5M [ GAAAAGC CTACGGCAGCTCG TGGCAGCTGAACAGTTCGAATTTATTTCGTATTGCCTTAGTTTTGGACCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATGCCTGCGAAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATTTTTTTTTAGCACAAACATCAACTTGGAATCTGGC GGCTGCCTTGTAATTACACCGCAGG AGAATTGGAAATGCAGTCTCAGTCGTGAAACGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGATATCAGCTGGGGCATGTCAACCTTGCGCTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACA ]
[+] EMBL CNS08KKZ [ CGGCAGCTCG TGGCAGCTGTACAGTTCGAATTTATTTCGTATTGTCTTAGTTTTGGACCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGC GGCTGCCTTGTAATTACACCGCAGG AGAATTGGAAATG AGTCTCAGTCGTGA ]
[+] EMBL CNS09552 [ GGAACAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGC GGCTGCCTTGTAATTACACCGCAGGAAGAA ]
[-] EMBL CNS08Z6U [ GGAAATG AGTCTCAGTCGTGAAACGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCG TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCG ATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAA CGCC GGAGGAGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATATAAAGAGCAATCGAATAAATTTA ]
[+] EMBL CNS09QL3 [ gAAGGC ATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCG TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCGCATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAA CGCC GGAGGAGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTAAAAAAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACATTTTAGCTAGAAAATTAAATTCGCTTAACATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATATAAAGAGCAATCGAATGTATTTTAGCTGAAAACGTAAAAAAAAAAAA]
[-] EMBL CNS08H5N [ AATGAGAACAACGTACCCG ATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATATATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACATTATTGCATCGCCAGGGTGTGATAA CGCC GGAGGAGGCAGACGGCAGTATCATGCGGTAAAAAAAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATA ]
[-] EMBL CNS09553 [ TGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCGAGGAATGTATTCCCCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAA CGCCGGGAGGAGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTAC ]
[-] EMBL CNS08ORS [ GTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGAAAAAATATTGCATCGCCAGGGTGTGATAACCCCC GGAGGGGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTAATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATATAAAGAGCAATCGAATtatt ]
consensusID : consensus_9187#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1071 fasta sequence
[CTGGATTTGAGAAAAGCCGGAAAAGCACAACGGCAGCTCGTGGCAGCTGAACAGTTCGAATTTATTTCGTATTGTCTTAGTTTTGGATCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAAGCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGCG-TACG-GCATTTGCCTTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGCGGCTGCCTTGTAATTACACCGCAGGGAGAATTGGAAATGAGTCTCAGTCGAGAAACATATCAGATGGTGAAAG-GCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACAACTACCAAGGAGAACAACGTACCCGATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCAAGGAATGCATTCCCCTGATCGACACCAGCAACCCATTTAAGGACGACGTCGACTACGATCTCAACCTAGTAGCTTGCGGTAAGTCTTACCAGCAAGCCTGGAGAACAACGGTGTTTAATAGACTGGAAGCGCATCTAATCTAAGACGCTAAGAAGAATGTGCCTACCTCGGGGAGCCGAAACCTAAAGCTGTAGTCCTCAAGGAAGAGGAATTAATCCAAGAGATAAGGCAACTCAATGATTTCCTGTATCATTATGAGGATTAGGAAAATAAAATAACATTATGCTTTCAAAAAAAAAAAAAAAA]
[+] EMBL CNS08MPM [CTGGATTTGAGAAAAGCCGGAAAAGCACAACGGCAGCTCGTGGCAGCTGAACAGTTCGAATTTATTTCGTATTGTCTTAGTTTTGGATCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAAGCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGCGCTACGCGCATTTGCCTTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGAACAAACATCAACTTGGAATCTGGCGGCTGCCTTGTAATTACACCGCA GGAGAATTGGAAATGAGTCTCAGTCGAGAAACATATCAGATGGTGAAAGCGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACAACTACCAAGGAGAACAACGTACCCGATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCAAGGAATGCATTCCCCTGATCGACACCAGCAACCCATTTAAGGACGACGTCGACTACGATCTCAACCTAGTAGCTTGCGGTAAGTCTTACCAGCAAGCCTGGAGAACAACGGTGTTTAATAGACTGGAAGCGCATCTAATCTAAGACGCTAAGAAGAATGTGCCTACCTCGGGGAGCCGAA ]
[+] EMBL BM576778 [ ccgGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCGAAAAAGCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGCG TACG GCATTTGCCTTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGCGGCTGCCTTGTAATTACACCGCAGGGAGAATTGGAAATGAGTCTCAGTCGAGAAACATATCAGATGGTGAAAG GCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACAACTACCAAGGAGAACAACGTACCCGATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCT ]
[-] EMBL CNS08MPN [ ACTGCCCCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGCG TACG GCATTTGCCTTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGCGGCTGCCTTGTAATTACACCGCAGGGAGAATTGGAAATGAGTCTCAGTCGAGAAACATATCAGATGGTGAAAG GCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACAACTACCAAGGAGAACAACGTACCCGATCCTCAATTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAACCAAGGAATGCATTCCCCTGATCGACACCAGCAACCCATTTAAGGACGACGTCGACTACGATCTCAACCTAGTAGCTTGCGGTAAGTCTTACCAGCAAGCCTGGAGAACAACGGTGTTTAATAGACTGGAAGCGCATCTAATCTAAGACGCTAAGAAGAATGTGCCTACCTC GGGAGCCGAAACCTAAAGCTGTAGTCCTCAAGGAAGAGGAATTAATCCAAGAGATAAGGCAACTCAATGATTTCCTGTATCATTATGAGGATTAGGAAAATAAAATAACATTATGCTTTCAAAAAAAAAAAAAAAA]
consensusID : consensus_9187#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 941 fasta sequence
[TTGGCCCACTGGCGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCGATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTAAAAAAAGATAACACGAACCGAGGAATGTATTTTTCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAACGCCGGAGGAGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACCATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATATAAAGAGCAATCGAATGT]
[-] EMBL CNS09QL4 [TTGGCCCACTGGCGTATCAGATGGTGAAAGGCAATCTTGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTACCCGATCCTCAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGATGGTTAAAAAAAGATAACACGAACCGAGGAATGTATTTTTCTGATCGATACCAGCAACCCATTTAAGGACGGTGAGCAAGCATACATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACTCGGCTCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGAAAAAAACAGACACCGTTACAATATTGCATCGCCAGGGTGTGATAACGCCGGAGGAGGCAGACGGCAGTATCATGCGGTTAGTGGAGTTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTATCTATCGCGGTGATCAGGGAGTGTGTTTGAATCAAGACAGTGCTTATACGATGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGATACAGTACGTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGTCAAATCAGTACAATTTGCTTCAAGAATTGTCCAATGGAGTGCAAAAAATTACCATTTTAGCTAGAAAATTAAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAGTACTGATTTCAAACCAAATATAAAGAGCAATCGAATGT]
[-] EMBL CNS08KL0 [ TTGGTTGGTGAGTGTGATACTATTCCGTGGGTGGGAATGCATTTTCAAGGCTTCTCCCATACACCAGTGGACCTTTTTTATCGCGGTGAT ]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9187#0 TTTGTTTTTAGCCGGAAAAGCACAACGGCAGCTCGTGGCAGCTGAACAGTTCGAATTTAT 60
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 TTCGTATTGTCTTAGTTTTGGACCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACC 120
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 CCAGCGTGCAAGATTACACACATAGAGAAGCCGAACTGGTGTCAGAAAACGTGCCAGCAG 180
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 CGAACGGAAATCCTTGCCTTACTACAGCCAATCCGTATGATTTCAGTTGTGATACCTGCG 240
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 AAAAATCCGAACTGCCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTC 300
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 TTTCGAGTACGGCAATTGCCCTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTT 360
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 GTTAAACGAGGCACTTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGCGGCTGC 420
consensus_9187#2 ------------------------------------------------------------
consensus_9187#1 ------------------------------------------------------------
consensus_9187#0 CTTGTAATTACACCGCAGGAGAATTGGAAATGAGTCTCAGTCGTGAAACGTATCAGATG- 479
consensus_9187#2 ------------------------------------TTGGCCCACTGGCGTATCAGATG- 23
consensus_9187#1 ------------------------------------CTGGATTTGAGAAAAGCCGGAAAA 24
* * **
consensus_9187#0 GTGAAAGGCAATCTTGATGGTAGT--GTTATTTCGAAAAGAGGAGATATGGTCGTAATC- 536
consensus_9187#2 GTGAAAGGCAATCTTGATGGTAGT--GTTATTTCGAAAAGAGGAGATATGGTCGTAATC- 80
consensus_9187#1 GCACAACGGCAGCTCG-TGGCAGCTGAACAGTTCGAATTTATTTCGTATTGTCTTAGTTT 83
* ** * * ** * *** ** * ****** * *** *** ** *
consensus_9187#0 -AAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCA-TGT-CAACCTTGCG 593
consensus_9187#2 -AAGTTGGATTTGAAGTCACCAAAATGTAGAGAGCAGCTGGGGCA-TGT-CAACCTTGCG 137
consensus_9187#1 TGGATCAGAATGTTGTGCCCAGAAATATGGAAGTTTCCTACCCCAGCGTGCAAGATTACA 143
* ** * * * **** * ** ** ** ** *** ** *
consensus_9187#0 TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTA 653
consensus_9187#2 TTCGATATAACGCTACGATGGATTCCTCCGAAAAGTACGACTACCAAGGAGAACAACGTA 197
consensus_9187#1 CACATAGAGAAGCCGAACTGG--TGTCAGAAAACGTGCCAGCAGCGAACGGAAATCCTTG 201
* * ** *** * *** ** * * * * * *** * *
consensus_9187#0 CCCGATCCT--CAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAG--TGTGCCG 709
consensus_9187#2 CCCGATCCT--CAAGTGCACGGTAGCTCGATTGCCGAATATCTGCGAGTAG--TGTGCCG 253
consensus_9187#1 CCTTACTACAGCCAATCCGTATGATTTCAGTTGT--GATACCTGCGAAAAAGCCGAACTG 259
** * * * * * * ** *** *** ****** * * * *
consensus_9187#0 ACT--GCAGGTTGAAAATGTGCCCGATGGTTATAAAAAGATAACACGAAC-CGAGGAATG 766
consensus_9187#2 ACT--GCAGGTTGAAAATGTGCCCGATGGTTAAAAAAAGATAACACGAAC-CGAGGAATG 310
consensus_9187#1 CCTCCGTGAATTGGAAAGCAACCTATCTGTGAACAGCAGCTTACTCTTTCGCGTACGGCA 319
** * *** *** ** ** * * ** * ** * * **
consensus_9187#0 TATTCCCCTGATCGA--TACCAGCAACCCATTT---AAGGACGGTGAGCAAGCA---TAC 818
consensus_9187#2 TATTTTTCTGATCGA--TACCAGCAACCCATTT---AAGGACGGTGAGCAAGCA---TAC 362
consensus_9187#1 TTTGCCTTTGATAGAGTTACTGAAAAATGAGTTCGTGGAGGCATTTGTTAAACGAGGCAC 379
* * **** ** *** ** * ** * * * ** * **
consensus_9187#0 ATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACT-CGGC 877
consensus_9187#2 ATCAGGCAAGACCAACTGCTAGAGTACATAGGTGTACTTGCACTGGACTGTAACT-CGGC 421
consensus_9187#1 TTTATATGCGGTTAGCACAAACATCAACTTGGAATCTGGCGGCTGCCTTGTAATTACACC 439
* * * * * * * * * ** * *** ***** * * *
consensus_9187#0 TCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGA----AAAAAACAGACA 933
consensus_9187#2 TCCGATCGAATATGTTAGTAGTTACAGGCTCGACGAGTGCAAGA----AAAAAACAGACA 477
consensus_9187#1 GCAGGGAGAATTGGAAATGAGTCTCAGTCGAGAAACATATCAGATGGTGAAAGGCAATCT 499
* * **** * * *** *** * ** * *** *** ** *
consensus_9187#0 CCGTTACAATATTGCATCGCCAGGGTGTGATAACGCCGGAG-------GAGGCAGACGGC 986
consensus_9187#2 CCGTTACAATATTGCATCGCCAGGGTGTGATAACGCCGGAG-------GAGGCAGACGGC 530
consensus_9187#1 TGATGGTAGTGTTATTTCGAAAAGAGGAGATATGGTCGTAATCAAGTTGGATTTGAAGTC 559
* * * ** *** * * * **** * ** * * ** * *
consensus_9187#0 AGTATCATGCGGTTAG----TGGAGTTGGTTGG---TGAGTGTGATACTATTCCG---TG 1036
consensus_9187#2 AGTATCATGCGGTTAG----TGGAGTTGGTTGG---TGAGTGTGATACTATTCCG---TG 580
consensus_9187#1 ACCAAAATGTAGAGAGCAGCTGGGGCATGTCAACCTTGCGTTCGATATAACGCTACGATG 619
* * *** * ** *** * ** ** ** **** * * **
consensus_9187#0 GGT-------GGGAATGCATTT-TCAAGG-------CTTCTCCCATACACCAGTGGACCT 1081
consensus_9187#2 GGT-------GGGAATGCATTT-TCAAGG-------CTTCTCCCATACACCAGTGGACCT 625
consensus_9187#1 GATTCCTCCGAAAAGTACAACTACCAAGGAGAACAACGTACCCGATCCTCAAGTGCACGG 679
* * * * ** * ***** * * ** ** * * **** **
consensus_9187#0 TATCT--ATCGCGGTG-ATCAGGGAGT-GTGT-TTGAATCAAGACAGTGCTTATAC--GA 1134
consensus_9187#2 TATCT--ATCGCGGTG-ATCAGGGAGT-GTGT-TTGAATCAAGACAGTGCTTATAC--GA 678
consensus_9187#1 TAGCTCGATTGCCGAATATCTGCGAGTAGTGTGCCGACTGCAGGTTGAAAATGTGCCCGA 739
** ** ** ** * *** * **** **** ** * ** * * * * **
consensus_9187#0 TGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGAT--------ACAGTAC 1186
consensus_9187#2 TGGTGATTACGAAACAAAGCATATTTTGGAGCAAATGTATATGAT--------ACAGTAC 730
consensus_9187#1 TGGTTATAAAAAGATAACACGAACCAAGGAATGCATTCCCCTGATCGACACCAGCAACCC 799
**** ** * * * ** * * *** ** **** ** *
consensus_9187#0 GTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGT--CAAATCAGTACAATT 1244
consensus_9187#2 GTTTCTGAGTTGCGCGATTTTCCAAATTTGACTGATCAATTGT--CAAATCAGTACAATT 788
consensus_9187#1 ATTTAAGGACGACGTCGACTACGATCTCAACCTAGTAGCTTGCGGTAAGTCTTACCAGCA 859
*** * ** * * * * ** * *** ** ** **
consensus_9187#0 TGCTTCAAGAAT-----TGTCCAATGGAGTGCAAAAAATTAC-ATTTTAGCTAGAAAATT 1298
consensus_9187#2 TGCTTCAAGAAT-----TGTCCAATGGAGTGCAAAAAATTACCATTTTAGCTAGAAAATT 843
consensus_9187#1 AGCCTGGAGAACAACGGTGTTTAATAGACTGGAAGCGCATCTAATCTAAGACGCTAAGAA 919
** * **** *** *** ** ** ** * ** * ** **
consensus_9187#0 AAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAG 1358
consensus_9187#2 AAATTCGCTTAAAATTCGCTTACACGAATCGTGATATTTAAATGATAAAGTGTATAATAG 903
consensus_9187#1 GAATGTGCCTAC--CTCGGGGAGCCGAAACCTAAAGCTGTAGTCCTCAAG---GAAGAGG 974
*** ** ** *** * **** * * * * * * * *** * *
consensus_9187#0 TACTGATTTCAAACCAAATATAAAG-AGCAATCGAATAAATTTAAGCTGAAAACGTAAAA 1417
consensus_9187#2 TACTGATTTCAAACCAAATATAAAG-AGCAATCGAATGT--------------------- 941
consensus_9187#1 AATTAATCCAAGAGATAAGGCAACTCAATGATTTCCTGTATCATTATGAGGATTAGGAAA 1034
* * ** * * ** ** * ** *
consensus_9187#0 AAAAAAAA----------------------------- 1425
consensus_9187#2 -------------------------------------
consensus_9187#1 ATAAAATAACATTATGCTTTCAAAAAAAAAAAAAAAA 1071
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||