These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9203#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 12 consensus length = 1325 fasta sequence [TCACCAAACAACAATCCCAGCAGAAGTGGAAAACGGC-C--------GAAGGAAAGAGAATCGCTGCCAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC-TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATCCG-GTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTGCAGCAGGCACACGTCGGTGCGGTCACGGCCGTTGCTACCGATCACAGCCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATG-AGGTTAACTGGAGTCGTCTTGTTGCGTTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACAC-AAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACACCGGAGGTTAAATTCTTTGACGATAAATCGAAAC-AGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGG-CGATGAGAAGGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTTAAGCGGGTATCGGTAGACACTGTTGCTGCCGTCGCAGAGTAAATGTACCAGACCATTAAGTGTTAAATGTATCGAATAATGATGAAATGCAGTGTT-CATGTTAAAAACCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAG] [+] EMBL CNS08GLV [TCACCAAACAACAATCCCAGCAGAAGTGGAAAACGGCTCTAATTTGTGAAGGAAA CGAATCGCTGCCAATAAATCACCGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCAGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGCGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTCTTGTGGCTGGGATAAGGTGGAAGAGCTTTTCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTtg ] [+] EMBL BM611613 [ ccgCAACAATCCCAGCAGAAGTGGAAAACGGC C G AGGAAAGAGCATCGCTGCTAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTGCCCGCACTGGCCAAGTGTACCGACTATCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACG ] [+] EMBL BM585621 [ ccgAATCCCAGCAGAAGTGGAAAACGGC C GAA GAAAGAGCATCGCTGCTAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTATAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACGGGTCTCTATCCG GTAGATAATCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCG ] [+] EMBL BM585565 [ ccgATCCCAGCAGAAGTGGAAAACGGC C GAA GAAAGAGCATCGCTGCTAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTATAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACGGGTCTCTATCCG GTAGATAATCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTA ] [+] EMBL BX625169 [ AATCGCTGCCAATAAATCACCGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCAGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATCCG GTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTGCAGCANGCACACGTCGGTGCGGTCACGGCCGTTGCTACCGATCACAGCCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCG ] [+] EMBL CNS08O5P [ AATCGCTGCCAATAAATCACCGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCAGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGCGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAA CCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATCCG GTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTGCAGCAGGCACACGTCGGTGCGGTCACGGCCGTTGCTACCGATCACAGCCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATT ] [+] EMBL BX622710 [ gTGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGATACCGATCAGCTACCGGCCACCGGAAACGTTGCCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGATTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACGGGTCTGTATCCG GTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTGCAGCANGCACACGTCGGTGCGGTCACGGNCGNTGCTACCGATCACAGCCAGGATT ] [+] EMBL CNS09ORA [ CGGCTGTGGGAAGGTGGATTC TGTGGCTGGGATAAGGTGGAAGAGCTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAACGCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATCCGCGTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTGCAGCAGGCACACGTCGGTGCGGTCACGGCCGTTGCTACCGATCACAGCCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATG AGGTTAACTGGAGTCGTCTTGTTGCGTTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACAC AAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACACCGGA GTTAAATTCTTTGACGATAAATCGAAAC AGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGG CGATGAGAAGGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTTAAGCGGGTATCGGTAGACACTGTTGCTGCCGTCGCAGAGTAAATGTACCAGACCATTAAGTGTTAAATGTATCGAATAATAAAAAAATGCAGTGTT CATGTTAAAAACCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAG] [-] EMBL CNS08GQA [ GGTGGAAGAG TTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTTTCCG GTAGATAACCGGTACGGGCATATCGGTGCCGTACCCGCGCTGGACTTCTTCCGCGGTCCCGTTCGGTTGGTTTTTTCCGGCTCGCTGGCCGGCTGCCTCCCGCTGTGGGATTCCAGTGAGGGGGTTCTccc ] [-] EMBL CNS09ORB [ CATTGCGAAGCCATCGTTACGGCACTGTGCTACACGAAGGTTGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATCCG GTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGAACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACCGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTAAACTCCAGCAGAACGCTGCAGAAGGCACACGTCGGTGCGGTAACGGCCGTTGCTACCGATCACAGCCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATG AGGTTAACTGGAGTCGTCTTGTTGCGTTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACAC AAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACACCGGAGGTTAAATTCTTTGACGATAAATCGAAAC AAATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGGCCGATGAGAAGGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTTAAGCGGGTATCGGTAGACACTGTTGCTGCCGTCGCAGAGTAAATGTACCAGACCATTAAGTGTTAAATGTATCGAATAATGATGAAATGCAGTG T CATG ] [-] EMBL CNS08O5Q [ CGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATCCG GTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTGCAGCAGGCACACGTCGGTGCGGTCACGGCCGTTGCTACCGATCACAGCCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATG AGGTTAACTGGAATCGTCTTGTTGCGTTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACAC AAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACACCGGAGGTTAAATTCTTTGACGATAAATCGAAAC AGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGG CGATGAGAAGGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTTAAGCGGGTATCGGTAGA ] [-] EMBL CNS08GLW [ GGTGGTGCGATGAAGGTTAACTGGA TCGTCTTGTTGCGTTGGGCGATGAAGCTGGGCAGGTTCATTTTATAAACACAAAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACACCGGAGGTTAAATTCTTTGACGATAAATCGAAACAAGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGG CGATGAGAAGGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTTAAGCGGGTATCGGTAGACACTGTTGCTGCCGTCGCAGAGTAAATGTACCAGACCATTAAGTGTTAAATGTATCGAATAATGATGAAATGCAGTGTTGCGT TTAAAAA A AAAAAAAAAA ] consensusID : consensus_9203#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 819 fasta sequence [GACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGATACCGATCAGCTACCGGCCACCGGAAACGTTGCCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGATTGTGGCCGGTAACACTTACACCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATGAGGCCAGCTGGAATCGTCTGGTGGCGGTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACACAAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACGCCGGAGGTTAAATTCTTTGACGATAAATCGAAACAGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGGCGATGAGAANGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTGAAGCGGGTATCGGTAGACACTGNTGCTGCCGTCGCANAGTAAATGTACAGTGCGCCAGAGCATAACCAGACCATTAAGTGTTAATGTATCGAATAATGATGAAATGCAGTGTTCATGTTAAA] [+] EMBL BX621161 [GACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGATACCGATCAGCTACCGGCCACCGGAAACGTTGCCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGATTGTGGCCGGTAACACTTACACCAGGATTCGTTGGCCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATGAGGCCAGCTGGAATCGTCTGGTGGCGGTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACACAAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACGCCGGAGGTTAAATTCTTTGACGATAAATCGAAACAGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCCAAAGGATGGCGATGAGAANGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAGCTATGTGAAGCGGGTATCGGTAGACACTGNTGCTGCCGTCGCANAGTAAATGTACAGTGCGCCAGAGCATAACCAGACCATTAAGTGTTAATGTATCGAATAATGATGAAATGCAGTGTTCATGTTAAA] consensusID : consensus_9203#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 748 fasta sequence [AGAATCCCCCGAGGTTAAACGGCTCTAATTTGTGAAGGAAACGAATCGCTGCAATAAATCACCGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCAGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCTGGACAAGCAATTGCACCCCTTTCTCGATTTGTGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTCTGTGGCTGGGATAAGGTGGAAGAGCTTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATTCCGGTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACCATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTTGCAGCCAGGACACGTCGGTGCGGTCACGGCGTTGCTACCGATCACCAGCCAGGATTCGTTGGCCG] [+] EMBL AL694087 [AGAATCCCCCGAGGTTAAACGGCTCTAATTTGTGAAGGAAACGAATCGCTGCAATAAATCACCGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCAGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCTGGACAAGCAATTGCACCCCTTTCTCGATTTGTGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTCTGTGGCTGGGATAAGGTGGAAGAGCTTTGGCAGCGAGGAGAAGGTGATCTTTAGCAAGCATTGCGAAGGCCATCGTTACGGCACTGTGCTACACGAAGGATGATGCGTTGTTTCTGCTTGGCAATGACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGGTGCGTGGAACAGGTCTCTATTCCGGTAGATAACCGGTACGAGCATATCGGTGCCGTAACCGCGCTGGACCATCTTCCGCGGTACCGATCGGATGGTAATTTCCGGCTCGATGGACGGCTGCATCAAGCTGTGGGATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTTGCAGCCAGGACACGTCGGTGCGGTCACGGCGTTGCTACCGATCACCAGCCAGGATTCGTTGGCCG] consensusID : consensus_9203#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 461 fasta sequence [GCAGATCCGCAGCGATGAAATCCCAGCAGAAGTGGAAAACGGCCGAAGAAAGAGCATCGCTGCTAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTATAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTCTGTGGCTGGGATAAGGTGGAAGACGCTTGGCAGCGAGGAGAACGGTGATCTTTAGGCAAGCATTGCGAAGCCATCGTTAGCGGCACTGTGCTACACGAAGGATGA] [+] EMBL BX466092 [GCAGATCCGCAGCGATGAAATCCCAGCAGAAGTGGAAAACGGCCGAAGAAAGAGCATCGCTGCTAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTATAGCAAACGTGTCGATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCACTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCGGTACCACTGGCGGACAAGCAATTGCACCCCTTTCTCGATTTGGCCACCGTGAACGGAGTGGGCAATGTGGTTGTGGCCGGTAACACTTACACCAACCGGCTGTGGGAAGGTGGATTCTGTGGCTGGGATAAGGTGGAAGACGCTTGGCAGCGAGGAGAACGGTGATCTTTAGGCAAGCATTGCGAAGCCATCGTTAGCGGCACTGTGCTACACGAAGGATGA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9203#2 -AGAATCCCCCGAGGTTAAA---CGGCTCTAATTTG-------TGAAGGAAA-CGAATCG 48 consensus_9203#3 GCAGATCCGCAGCGATGAAATCCCAGCAGAAGTGGAAAACGGCCGAAGAAAG-AGCATCG 59 consensus_9203#0 ------TCACCAAACAACAATCCCAGCAGAAGTGGAAAACGGCCGAAGGAAAGAGAATCG 54 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 CTGC-AATAAATCACCGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTC 107 consensus_9203#3 CTGCTAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTATAGCAAACGTGTC 119 consensus_9203#0 CTGCCAATAAATCACTGCGTCCGGTTCTGACCATCAAAAATGGACTACAGCAAACGTGTC 114 consensus_9203#1 ----------------------------GACCATCAAAAATGGACTACAGCAAACGTGTC 32 ******************* ************ consensus_9203#2 GATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCAGAAACGTTACCCGCA 167 consensus_9203#3 GATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCA 179 consensus_9203#0 GATATGATATCGGCCTACTCGGTACCGATCAGCTACCGGCCACCGGAAACGTTACCCGCA 174 consensus_9203#1 GATATGATATCGGCCTACTCGATACCGATCAGCTACCGGCCACCGGAAACGTTGCCCGCA 92 ********************* ********************** ******** ****** consensus_9203#2 CTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCG 227 consensus_9203#3 CTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCG 239 consensus_9203#0 CTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCG 234 consensus_9203#1 CTGGCCAAGTGTACCGACTACCCGAACACCAACTCGCTGCAGTACCGGCTGTCGGAAGCG 152 ************************************************************ consensus_9203#2 GTACCACTGGCTGGACAAGCAATTGCACCCCTTTCTCGATTTGTGCCACCGTGAACGGAG 287 consensus_9203#3 GTACCACTGGC-GGACAAGCAATTGCACCCCTTTCTCGATTTG-GCCACCGTGAACGGAG 297 consensus_9203#0 GTACCACTGGC-GGACAAGCAATTGCACCCCTTTCTCGATTTG-GCCACCGTGAACGGAG 292 consensus_9203#1 GTACCACTGGC-GGACAAGCAATTGCACCCCTTTCTCGATTTG-GCCACCGTGAACGGAG 210 *********** ******************************* **************** consensus_9203#2 TGGGCAATGTGGTTGTGGCCGGTAACACTTACACCA--ACCGGCTGTGGGAAGGTGGATT 345 consensus_9203#3 TGGGCAATGTGGTTGTGGCCGGTAACACTTACACCA--ACCGGCTGTGGGAAGGTGGATT 355 consensus_9203#0 TGGGCAATGTGGTTGTGGCCGGTAACACTTACACCA--ACCGGCTGTGGGAAGGTGGATT 350 consensus_9203#1 TGGGCAATGTGATTGTGGCCGGTAACACTTACACCAGGATTCGTTGGCCGTTAGTTGCTC 270 *********** ************************ * * ** * ** * * consensus_9203#2 CTGTGGCTGGGATAAGGTGGAAGAGCTTTGGCA-GCGAGGAGAA-GGTGATCTT--TAG- 400 consensus_9203#3 CTGTGGCTGGGATAAGGTGGAAGACGCTTGGCA-GCGAGGAGAACGGTGATCTT--TAGG 412 consensus_9203#0 CTGTGGCTGGGATAAGGTGGAAGAGC-TTGGCA-GCGAGGAGAA-GGTGATCTT--TAG- 404 consensus_9203#1 GCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGGCGATCGCACTGTA 330 * ** ** ** * * * ** * ** **** * consensus_9203#2 CAAGCATTGCGAAGG--CCATCGTTA-----CGGCACTGTGCTACACGAAGGATGATGCG 453 consensus_9203#3 CAAGCATTGCGAAG---CCATCGTTAG----CGGCACTGTGCTACACGAAGGATGA---- 461 consensus_9203#0 CAAGCATTGCGAAG---CCATCGTTA-----CGGCACTGTGCTACACGAAGGATGATGCG 456 consensus_9203#1 CGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATGAGGCCAGCTGGAATCG 390 * ** ** * ** ** * *** ** * * ** ** consensus_9203#2 T-TGTTTCTGCTTGGCAATG-ACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGG 511 consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 T-TGTTTCTGCTTGGCAATG-ACCGAGGATCGATCGAGCTGTGGTCCACGGGCAATGCGG 514 consensus_9203#1 TCTGGTGGCGGTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACACAAGGCAACCGAA 450 consensus_9203#2 TGCGTGGAACAGGTCTCTATTCCGGTAGATAACCGGTACGAGCATATCGGTGCCGTAACC 571 consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 TGCGTGGAACAGGTCTCTAT-CCGGTAGATAACCGGTACGAGCATATCGGTGCCGTAACC 573 consensus_9203#1 CGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAATCTCATTCCACAG 510 consensus_9203#2 GCGCTGGACCATCTTCCGCGGTACCG-ATCGGATGGTAATTTCCGGCTCGATGGACGGCT 630 consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 GCGCTGGAC-ATCTTCCGCGGTACCG-ATCGGATGGTAATTTCCGGCTCGATGGACGGCT 631 consensus_9203#1 AAATTACTTTGCCGTGCTCGGGAACACGCCGGAGGTTAAATTCTTTGACGATAAATCGAA 570 consensus_9203#2 GCATCAAGCTGTGG-GATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCTTGCAGCC 689 consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 GCATCAAGCTGTGG-GATTACAGTGAAGGGGATCTACACTCCAGCAGAACGCT-GCAGCA 689 consensus_9203#1 ACAGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTATTTGGGAGAATCC 630 consensus_9203#2 AGGACACGTCGGTGCGGTCACGGC-GTTGCTACCGATCACCAGCCA---GGATTCGTTGG 745 consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 GGCACACGTCGGTGCGGTCACGGCCGTTGCTACCGATCAC-AGCCA---GGATTCGTTGG 745 consensus_9203#1 AAAGGATGGCGATGAGAANGCTTCACCTTCTTTTGCATGTACGTTGATCGGGTGGGACAG 690 consensus_9203#2 CCG--------------------------------------------------------- 748 consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 CCGTTAGTTGCTCGCACGATCGGTCCGCATTGTTGTGGGATTTCCGTGAAACGAAACCGG 805 consensus_9203#1 CTATGTGAAGCGGGTATCGGTAGACACTGNTGCTGCCGTCGCANAGTAAATGTACAGTGC 750 consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 CGATCGCACTGTACGAGAGGCATGATGCCGCCTTCACGACCATCCGGTGGTGCGATGAGG 865 consensus_9203#1 GCCAGAGCATAACCAGACCATTAAGTGTTAATGTATCGAATAATGATGAAATGCAGTGTT 810 consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 TTAACTGGAGTCGTCTTGTTGCGTTGGGCGATGCGGCTGGGCAGGTTCATTTTATAGACA 925 consensus_9203#1 CATGTTAAA--------------------------------------------------- 819 consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 CAAGGCAACCGAACGTGTTGCTCGAATCGGTGTCCTGTTTCGACCGGAAGGTGCACAAAA 985 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 TCTCATTCCACAGAAATTACTTTGCCGTGCTCGGGAACACACCGGAGGTTAAATTCTTTG 1045 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 ACGATAAATCGAAACAGATTCACGTGGAGACTAGTGCGACAAACTACGTGCGTGATATTA 1105 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 TTTGGGAGAATCCAAAGGATGGCGATGAGAAGGCTTCACCTTCTTTTGCATGTACGTTGA 1165 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 TCGGGTGGGACAGCTATGTTAAGCGGGTATCGGTAGACACTGTTGCTGCCGTCGCAGAGT 1225 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 ------------------------------------------------------------ consensus_9203#3 ------------------------------------------------------------ consensus_9203#0 AAATGTACCAGACCATTAAGTGTTAAATGTATCGAATAATGATGAAATGCAGTGTTCATG 1285 consensus_9203#1 ------------------------------------------------------------ consensus_9203#2 ---------------------------------------- consensus_9203#3 ---------------------------------------- consensus_9203#0 TTAAAAACCTTATTCAAAAAAAAAAAAAAAAAAAAAAAAG 1325 consensus_9203#1 ---------------------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||