These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9205#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 1194 fasta sequence [TCGGGAAGCGGCAAAACAAAACAAACTAGCGGCGTTTTCCTGCATTTACGGCATT-G-TGAGCTGCATTTTTGGTTCGTG-ATATTGC--TTTTTTTGTTGGTAAATCCTTTTCGAAACTACTTCCTTGTAGTTCGCATAGAAAAG-TATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG-CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA-GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTCATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG-AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCATTACTGGCAATCGAGC-GCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAATGC-ATAGACAATGAGTTCTGTAAAAATGTTTCGCATAGTAAAGTATAAACAAGAGAACT-TACCTTTTCACG] [+] EMBL CNS09CIY [TCGGGAAGCGACAAAACAAAACTAACTAGCGGCGTTTTCCTGCATTTACGGCATT G TGAGCTGCATTTTTGGTTCGTG GTATTGC TTTTTTGGTTGGTAAATCCTCTTCGAAATTACTTCCTTGTAGTTCGCATAGAAAAG TATCAATATCGCAACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTGGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAACGCCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATG ] [+] EMBL CNS09OW6 [ CGGGAAGCGGCAAAACAAAACAAACTAGCGGCGTTTTCCTGCATTTACGGCATT G TGAGCTGCATTTTTGGTTCGTGTATATTGC TTTTTTTGTTGGTAAATCCTTTTCGAAACTACTTCCTTGTAGTTCGCATAGAAAAG TATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTGCCGATTCGCATACAAGC ] [+] EMBL CNS08XTY [ GCGGCAAAACAAAACAAACTAGCGGCGTTTTCCTGCATTTACGGCATTAGATGAGCTGCATTTTTGGTTCGTG ATATTGCTTTTTTTTTGTTGGTAAATCCTTTTCGAAACTACTTCCTTGTAGTTCGCATAGAAAAGCTATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCATTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA AGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTCATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGC ] [+] EMBL CNS09NMR [ GGC TTTTCCTGCATTTACGGCATT G TGAGCTGCATTTTTGGTTCGTG ATATTGCTTTTTTTTTGTTGGTAAATCCTTTTCGAAACTACTTCCTTGTAGTTCGCATAGAAAAG TATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACATCGTTTCAGATTTCTTTTCTCATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTA ] [+] EMBL CNS09EQQ [ TGCATTTTTGGTTCGTG ATATTGCTTTTTTTTTGTTGGTAAATCCTTTTCGAAACTACTTCCTTGTAGTTCGCATAGAAAAG TATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATT ] [+] EMBL BM595787 [ cCGTG GTATTGC TTTTTTGGTTGATAAATCCTTTTCGAAATTACTTCCTTGTAGTTCGCATAGAAAAG TATCAATATCGCAACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGA ] [+] EMBL BM622695 [ AATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGATCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATAGGGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTTGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAACGcc ] [+] EMBL BX624714 [ AAGCAATCGAAAATGGAACCACCAGCTTCCGATTTGCAAAAAAACCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAACGCCGTCGACGCCAGCGCCAGGAGCTGGGCGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAGGAAACCGATGCTCGTAAGCTGCAAGGCGTCATGGAACAACTGAAAGCTATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTCATTCGCGATGGAGCTGTAGCATTANAAACGGGTGATGATCTGCTATCCGNTCGTCCCACTTCCAGCAGCGAAAAAACAGC AAACNAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTT AACATTGCC AATGGCANANCGCTGTCAAGCAATT ] [-] EMBL CNS09NMS [ TTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGCCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACAAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTCATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCATTACTGGCAATCGAGC GCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAATGC ATAGACAATGAGTTCTGTAAAAATGTTTCGCATAGTAAAGTATAAACAAGAGAACTGTACCTTTTCACG] [-] EMBL CNS09EQR [ AAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCCACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGGCCCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGAAAGATGCTCGCAAGCTGCAAGGTGTTACGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTAATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCATTACTGGCAATCGAGC GCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAATGC ATAGACAATGAGTTCTGTAAAAATGTTTCGCATAGTAAAGT ] [-] EMBL CNS08XTZ [ AGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGTTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTAATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCATTACTGGCAATCGAGCAGCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAATGCTATAGACAATGAGTTCTGTAAAA ] [-] EMBL CNS09OW7 [ GGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTAGCAGCGG CCATAAAAGCAATCATTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTCATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCATTACTGGCAATCGAGC GCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAATGC ATAGACAATGAGTTCTGTAAAAATGTTTCGCATAGTAAAGTATAAACAAGAGAACT TAC ] [-] EMBL CNS09CIZ [ TCAGAGCATGGCTGCAGAGAAGATGGAAAATGCTTCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTGCGACGAAGAGCTGGCAGCGG CCATAAAAGCAATAATTGGCGATTCCGGCAACCCCTTGCAATGGCTAAACATA GGAGAGCTAGGCATAAAGTCATTTAGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGGGCTGGAACCCGTACAGGTAGAAAAGCCCGTCAAAGAACGCCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGCAAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGTGTTATGGAACAACTGAAAGCTATATACGAGGAAAGAAGACAACCGATACCCTACTTCGAGCTCATCACGGACCCAACCGATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTTTTCTTATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTCCCACTTCCAGCAGCG AAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTCTATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCATTACTGGCAATCGAGC GCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAATGC ATAGACAATGAGTTCTGTAAAAATGTTTCGCATAGTAAAGTATAAACAAGAGAACTGTAC ] consensusID : consensus_9205#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 906 fasta sequence [AGGTTAAAACAAAACTAACTAGCGGCGTTCCTGCACTTTACTGGCATTGTGAGCTGCATTTTTGGTTCGTGGTATTGCTTTTGGTTGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCNATTAAACGCCCTGGAACGCAGAAAAAAGTACACACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTATACATACTATTCTGATTCAGACGGANCAACTTGATCAGAGCATGGCTGCAGAGAAGATGGNAGCAATTGCTTCCNGAGATGTGCCATTAATTGTACAGGTCGTTAAAAAAATGGGGACACGATNTATAAGTTGGNGTGGNCAGACGTTTGGCGAAAACANCNGNGAACAGGCAACCACATATTCTGCGGACGCANAGCAGCTTCGGGCTANCCGGGNCATTAACAAAGCAATNCCATTGGGGCATTACCCNGGCCACTCCCTTTGGCCAACTCGGGCTNACCACACTCATCGCAAGAGACTANATGCCATACTCANCNCNTCTCNTACTAACTAATTGNTCCCAAACGAACANAGTANTGNCACCGGAGTGGCGCNGTTTACCTTTGGGGGGGAAAGGCCGGTAATCTGGTANGAGCCATTGGGGGAATCNNCCGACTAACNCTGAGGTTACTACAACAAAANGACCCCCGCNCGCCTAAACNAGAAACGCGACCNCGGCNNCGCGAACCGNGCCCACNCGTGGCCACCGNNCAAACCCCTTNGTGGCGTGTATACCCCATACGCACACACCCCTGTCAAAACTGNNAGGAGTGGGNTNCCAACACATTTGGAAAACCCAAGTCAACTAANATACAAGAACATTGTCNTNGTCCANTCATGCGAA] [+] EMBL AL932203 [AGGTTAAAACAAAACTAACTAGCGGCGTTCCTGCACTTTACTGGCATTGTGAGCTGCATTTTTGGTTCGTGGTATTGCTTTTGGTTGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCNATTAAACGCCCTGGAACGCAGAAAAAAGTACACACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTATACATACTATTCTGATTCAGACGGANCAACTTGATCAGAGCATGGCTGCAGAGAAGATGGNAGCAATTGCTTCCNGAGATGTGCCATTAATTGTACAGGTCGTTAAAAAAATGGGGACACGATNTATAAGTTGGNGTGGNCAGACGTTTGGCGAAAACANCNGNGAACAGGCAACCACATATTCTGCGGACGCANAGCAGCTTCGGGCTANCCGGGNCATTAACAAAGCAATNCCATTGGGGCATTACCCNGGCCACTCCCTTTGGCCAACTCGGGCTNACCACACTCATCGCAAGAGACTANATGCCATACTCANCNCNTCTCNTACTAACTAATTGNTCCCAAACGAACANAGTANTGNCACCGGAGTGGCGCNGTTTACCTTTGGGGGGGAAAGGCCGGTAATCTGGTANGAGCCATTGGGGGAATCNNCCGACTAACNCTGAGGTTACTACAACAAAANGACCCCCGCNCGCCTAAACNAGAAACGCGACCNCGGCNNCGCGAACCGNGCCCACNCGTGGCCACCGNNCAAACCCCTTNGTGGCGTGTATACCCCATACGCACACACCCCTGTCAAAACTGNNAGGAGTGGGNTNCCAACACATTTGGAAAACCCAAGTCAACTAANATACAAGAACATTGTCNTNGTCCANTCATGCGAA] consensusID : consensus_9205#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 517 fasta sequence [AGCATANATGGTTGGTAAATCCTTTTCGAAATTACTTCCTTGTAGTTCGCATAGAAAAGTATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAAAGCATGGCTGCAGAGANGATGGANAATGCTNCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTTGCGACGAGAGCTAGCAGCCGGCATAANNGCAATCANNGGCGATTCCCGCAACCCCCTGCAATGGCTACACATAGGAGAGCTAGGCATTAAGTCATTTAGTATGTCA] [+] EMBL BX624317 [AGCATANATGGTTGGTAAATCCTTTTCGAAATTACTTCCTTGTAGTTCGCATAGAAAAGTATCAATATCGCGACAATAACCAAAACTCTGTAAACACATCAAGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGCCCTGGAACGCAGAAAAAAGTACAACGAGCTATTGGATTATGGACATGAATTGGCCCTCAGAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTTCATCTATTCTGATTCAGACGGACCAACTGCATCAAAGCATGGCTGCAGAGANGATGGANAATGCTNCCGAGATGTGCATTAATGTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCAGAAAAGCGAAAGCACCCAATTTTTGCGACGAGAGCTAGCAGCCGGCATAANNGCAATCANNGGCGATTCCCGCAACCCCCTGCAATGGCTACACATAGGAGAGCTAGGCATTAAGTCATTTAGTATGTCA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9205#0 TCGGGAAGCGGCAAAACAAAACAAACTAGCGGCGTTTTCCTGCATTTACGGCATTGTGAG 60 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 ------------------------------------------------------------ consensus_9205#0 CTGCATTTTTGGTTCGTGATATTGCTTTTTTTGTTGGTAAATCCTTTTCGAAACTACTTC 120 consensus_9205#2 ----------------------AGCATANATGGTTGGTAAATCCTTTTCGAAATTACTTC 38 consensus_9205#1 ---------------------------------------AGGTTAAAACAAAACTAACTA 21 * * *** ** * consensus_9205#0 CTTGTAGTTCGCATAGAAAAGTATCAATATCGCGACAATAACCAAAACTCTGTAAACACA 180 consensus_9205#2 CTTGTAGTTCGCATAGAAAAGTATCAATATCGCGACAATAACCAAAACTCTGTAAACACA 98 consensus_9205#1 GCGGC-GTTCCTGCACTTTACTGGCATTGTGAGCTGCATTTTTGGTTCGTGGTATTGCTT 80 * **** * * * ** * * ** * *** consensus_9205#0 TCAA--GCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGC 238 consensus_9205#2 TCAA--GCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCAATTAAACGC 156 consensus_9205#1 TTGGTTGCAATCGAAAATGGAACCACCAGCTTCCGATTCGCATAAAAGCCNATTAAACGC 140 * ******************************************** ********* consensus_9205#0 CCTGGAACGCAGAAAAAAGTACA-ACGAGCTATTGGATTATGGACATGAATTGGCCCTCA 297 consensus_9205#2 CCTGGAACGCAGAAAAAAGTACA-ACGAGCTATTGGATTATGGACATGAATTGGCCCTCA 215 consensus_9205#1 CCTGGAACGCAGAAAAAAGTACACACGAGCTATTGGATTATGGACATGAATTGGCCCTCA 200 *********************** ************************************ consensus_9205#0 GAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTT-CAT-CTATTCTGATTCA 355 consensus_9205#2 GAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTTT-CAT-CTATTCTGATTCA 273 consensus_9205#1 GAACACAAACGGAAGATGCGGTGGGTATATTCCAAGGCGTATACATACTATTCTGATTCA 260 **************************************** * *** ************* consensus_9205#0 GACGGACCAACTGCATCAGAGCATGGCTGCAGAGAAGATGGAA---AATGCTTCCG-AGA 411 consensus_9205#2 GACGGACCAACTGCATCAAAGCATGGCTGCAGAGANGATGGAN---AATGCTNCCG-AGA 329 consensus_9205#1 GACGGANCAACTTGATCAGAGCATGGCTGCAGAGAAGATGGNAGCAATTGCTTCCNGAGA 320 ****** ***** **** **************** ***** * **** ** *** consensus_9205#0 TGTGC-ATTAAT-GTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCA 469 consensus_9205#2 TGTGC-ATTAAT-GTACAGGTCGTAAAAATGGGACACGATTTAGTGGGGGCAGCGTTGCA 387 consensus_9205#1 TGTGCCATTAATTGTACAGGTCGTTAAAAA------------AATGGGGACA-CGATNTA 367 ***** ****** *********** **** * ***** ** ** * * consensus_9205#0 GAAAAGCGAAAGCACCCAATTTT-GCGACGAAGAGCTAGCAGCGGCCATAAAAGCAATCA 528 consensus_9205#2 GAAAAGCGAAAGCACCCAATTTTTGCGACGA-GAGCTAGCAGCCGGCATAANNGCAATCA 446 consensus_9205#1 TAAGTTGGNGTGGNCAGACGTTTGGCGAAAA--------CANCNGNGA-ACAGGCAACCA 418 ** * * * * *** **** * ** * * * * **** ** consensus_9205#0 TTGGCGATTCCGGCAACCCCTTGCAATGGCTACACATAGGAGAGCTAGGCATAAAGTCAT 588 consensus_9205#2 NNGGCGATTCCCGCAACCCCCTGCAATGGCTACACATAGGAGAGCTAGGCATTAAGTCAT 506 consensus_9205#1 CAT---ATTCTGCGGACGCANAGCAGC--TTCGGGCTANCCGGGNCATTAACAAAGCAAT 473 **** ** * *** * ** * * * * *** ** consensus_9205#0 TT-AGTATGTCAAAACAATCGCCGTGCTTACTGGGAGCGTTCGAGCTGGAACCCGTACAG 647 consensus_9205#2 TT-AGTATGTCA------------------------------------------------ 517 consensus_9205#1 NCCATTGGGGCATTACCCNGGCCACTCCCTTTGGCCA-ACTCGGGCTNA---CCACACTC 529 * * * ** consensus_9205#0 GTAGAAAAGCCCGTCAAAGAGCGTCGTCGACGCCAGCGCCAGGAGCTGGGTGATCCACGC 707 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 ATCGCAAGAG--ACTANATGCCATACTCANCNCNTCTCNTACTAACTAATTGNTCC---C 584 consensus_9205#0 AAACCTGAAACAGTGGTCAAATTGAACCAAGAAGAGACAGATGCTCGCAAGCTGCAAGGT 767 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 AAAC---GAACANAGT---ANTGNCACCGGAGTGGCGCNGTTTACCTTTGGGGGGGAAAG 638 consensus_9205#0 GTTATGGAACAACTGAAAGCCATATACGAGGAAAGAAGACAACCGATACCCTACTT-CGA 826 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 GCCGGTAATCTGGTANGAGCCAT---TGGGGGAATCNNCCGACTAACNCTGAGGTTACTA 695 consensus_9205#0 GCTCATCACGGACCCAACC-GATTACATGAATACCGTCGATACAGCGTTTCAGATTTCTT 885 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 CAACAAAANGACCCCCGCNCGCCTAAACNAGAAACGCGACCNCGGCNNCGCGAACCGNGC 755 consensus_9205#0 TTCTCATTCGCGATGGAGCTGTAGCATTAGAAACGGTTGATGATCTGCTATCCGTTCGTC 945 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 CCACNCGTGGCCACCGNNCAAACCCCTTNGTGGCGTGT----ATACCCCATACGCACACA 811 consensus_9205#0 CCACTTCCAGCAGCGAAAAACAGCAAAACAAGCGAACCGATGACAACGTTCAGGCAATTC 1005 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 CCCCTGTCAA-AACTGNNAGGAGTGGGNTNCCAACACATTTGGAAAACCCAAGTCAACTA 870 consensus_9205#0 -TATCCTTAAACTTTGCCAAATGGCAGAGCGCTGTCAAGCAATTCCGTTTGAAAAGACCA 1064 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 ANATACAAGAACATTGTCN--TNGTCCANTCATGCGAA---------------------- 906 consensus_9205#0 TTACTGGCAATCGAGCGCGATACACTGGACGCGTCTCAAGCTTCGTAATTAGCTAATAAT 1124 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 ------------------------------------------------------------ consensus_9205#0 GCATAGACAATGAGTTCTGTAAAAATGTTTCGCATAGTAAAGTATAAACAAGAGAACTTA 1184 consensus_9205#2 ------------------------------------------------------------ consensus_9205#1 ------------------------------------------------------------ consensus_9205#0 CCTTTTCACG 1194 consensus_9205#2 ---------- consensus_9205#1 ---------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||