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Anopheles gambiae
cluster # 9206 cluster # 9206       Sequences # 15       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9206#0 length = 1054 sequences # 8  
consensus_9206#1 length = 974 sequences # 5  
consensus_9206#2 length = 958 sequences # 2  

consensusID : consensus_9206#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 8
consensus length = 1054
fasta sequence
                              [TTTTTTTTTTTTTTTTGACAACCACATGCCGCTGGAATTCGTAAACAATCGATTGTTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA-GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTACCAAGCGTAG-G-GTGGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAA-CGCTGAAAAAGTGCTTCGACA-CGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAAATAAATCTTTGCAACGAAAAAAAAAAAAAA]

[+] EMBL CNS09N71             [TTTTTTTTTTTTTTTTGACAACCACATGCCGCTGGAATTCGTAAACAATCGATTGTTGTTTGTGCTGAGTTTGTCGAAAGATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTTAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTA CAAGCGTAG G GTGGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACCGCTGAAAAAGTGCTTCGACA CGGCAA                                                                                                                                        ]
[+] EMBL CNS099R0             [         TTTTTTTGACAACCACATGCCGCTGGAATTCGTAAACAATCGATTGTTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGGCAAATGTCCTTTTAAGTGAAGGGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTACAAAGCGTAG G GTGGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAA CGCTGAAAAAGTGCTTCGACA CGGCAACCACCGTAGGCGCCTC                                                                                                                        ]
[+] EMBL CNS099E9             [             tactggAACCACATGCCGCTGGAATTCGTAAACAATCGATTGTTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCATTTATAAAACATCCACAATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTTAACAACTAGCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACC                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CNS08H3V             [                              ttTGGAATTCGTAAACAATCGATTGTTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCATTTATAAAACATCCACAATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGT AAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGCCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATTAAGTTGATTCTGACCGACGATCCGTACGACTGTTAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTACAAAGCGTAG GTTTGGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAA CGCTGAAAAAGTGCTTCGACA CGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTT                                           ]
[+] EMBL BM622705             [                                                      ccgGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTACGGATACCGCGTGTTTCAACAGCAAT                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[-] EMBL CNS09N72             [                                                                               GATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAAATAGTCGTCCATGCAGCCGGATCCGCGGAACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCCTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTAGCAAGCGTAGCG GT GGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAA CGCTGAAAAAGTGCTTCGACA CGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAAATAAAT                        ]
[-] EMBL CNS099R1             [                                                                                                         AAACATCCATTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGGACTCGAATCAGAAATAGTCGTCCATGCAGCCGGATCCGCGA ACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCCTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTA GGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTAGCAAGCGTAGCG GT GGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAA CGCTGAAAAAGTGCTTCGACA CGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAA                              ]
[-] EMBL CNS099EA             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TCCGGGGAAGGATCAATACGCTTGGAAA CGCTGAAAAAGTGCTTCGACACCGGCAACCCCCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAAATAAATCTTTGCAACGAAAAAAAAAAAAAA]


>consensus_9206#0 TTTTTTTTTTTTTTTTGACAACCACATGCCGCTGGAATTCGTAAACAATCGATTGTTGTT TGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGG CAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACA TGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAG TCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAG TAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTT TCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAG CGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGG CTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTC TAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCA ATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTC TGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAA CGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTA GCGTACCAAGCGTAGGGTGGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAAC AGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAA AGTGCTTCGACACGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCAC TGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTT TGAAATAAATCTTTGCAACGAAAAAAAAAAAAAA



consensusID : consensus_9206#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 974
fasta sequence
                              [CGGGTTGCTATCTATTTGATTTGAAATCATTTATAAAACATCCACAATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAG-GTGGACTTTTTCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAATAAACTAGCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTC-GGCCGAAGAGGAAGAATGTAGCGTAGCAA-GCGTA-GCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGC-CCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAAATAAATCTTGAAAAAACTC]

[+] EMBL CNS08OIE             [CGGGTTGCTATCTATTTGATTTGAAATCATTTATAAAACATCCACAATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAG GTGGACTTTTTCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAATAAACTAGCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTATCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTCAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTC GGCCGAAGAGGAAGAATGTAGCGTA CAACGCGTAGGCTG GGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGC GCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAAC                                                                   ]
[+] EMBL CNS08M48             [            aATTTGATTTGAAATCATTTATAAAACATCCACAATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGCGTGGACTTTTTCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAA CAACTAGCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CNS08WP6             [                                                                                                            CATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CNS08H3W             [                                                                                                                                                                                                                                                                                                                                                                         TTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGCCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCCTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGGTACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTTTGACCGACGATCCGTACGACTGTGAGCGTTTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTC GGCCGAAGAGGAAGAATGTAGCGTAGCAA GCGTA GCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGC CCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAAATAAATCTTGAAAAAACTC]
[-] EMBL CNS08M49             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TCTAGAGTGTGGTGGAAATTTATTCGACGCCTTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTTTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGGCCGAAGAGGAAGAATGTAGCGTAGCAA GCGTA GCGGTGGGGGTTTCCTGCCGCCCCGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGCGCCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAATTCGAAGGGATT GGCAAGCGTGAAATTT                                ]


>consensus_9206#1 CGGGTTGCTATCTATTTGATTTGAAATCATTTATAAAACATCCACAATGGCAAATGTCCT TTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGA TGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGC AGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGA AATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTG CTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAATAAACTAGCGACGGAAA TTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGT GCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTG GTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGA TACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACG ATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCA AGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTAGCAA GCGTAGCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAA CTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCG ACACGGCAACCACCGTAGGCCCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGG ATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTTTTGAAATAAA TCTTGAAAAAACTC



consensusID : consensus_9206#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 958
fasta sequence
                              [CCGCGGACGCGTGGGTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATTAGTTATAAAACATCCACTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAATTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTAGCAAGCGTAGCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAAGAAACTTTCAATAAAAA]

[+] EMBL BM575310             [CCGCGGACGCGTGGGTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATTAGTTATAAAACATCCACTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAATTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACG                                                                                                                                                                                                                                                                                                               ]
[-] EMBL CNS08OIF             [                                                        catTTATAAAACATCCACAATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGGAACTGCGTCTGGCTAACACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAACAACTAGCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATTATAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGAATTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGTAGCGTAGCAAGCGTAGCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAAGAAACTTTCAATAAAAA]


>consensus_9206#2 CCGCGGACGCGTGGGTGTTTGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATTAGT TATAAAACATCCACTATGGCAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTG CATGGTATACAGAAAAACATGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATG GAATTCGAATCAGAGATAGTCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAAC ACGGACATACTGGTAGGAGTAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAAC GAGGGAAAGGTGGACTTTTTCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGC CGAGGTGGTGAACAACTAGCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCT CAAAAGGGGTTCGATTTGGCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTG TACGTCGATGTGTTGATTCTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCC GTGAAGGGCGCATTGTTCAATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGC GGCTCGATGGACTTGATTCTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACG ACTGCGCCCATCCTAGTAACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCG GCCGAAGAGGAAGAATGTAGCGTAGCAAGCGTAGCGGTGGGGGTTTCCTGCCGCCCTGAT GGGAATACAACCCCCAAACAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATA CGCTTGGAAACGCTGAAAAAGTGCTTCGACACGGCAACCACCGTAGGCGCCTCCCTCAAC AAAGCATTGATGAAAGCACTGCATGAGGATGAAACTAGAAAGAAACTTTCAATAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9206#0      TTTTTTTTTTTTTTTTGACAACCACATGCCGCTGGAATTCGTAAACAATCGATTGTTGTT 60
consensus_9206#1      ------------------------------------------------------------
consensus_9206#2      -----------------------------------------CCGCGGACGCGTGGGTGTT 19
                                                                                  

consensus_9206#0      TGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATCAGTTATAAAACATCCATTATGG 120
consensus_9206#1      ---------CGGGTTGCTATCTA-TTTGATTTGAAATCATTTATAAAACATCCACAATGG 50
consensus_9206#2      TGTGCTGAGTTTGTTGAAAGATAATTTGATTTGAAATTAGTTATAAAACATCCACTATGG 79
                                  ****  *  ** ************* * **************  ****

consensus_9206#0      CAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACA 180
consensus_9206#1      CAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACA 110
consensus_9206#2      CAAATGTCCTTTTAAGTGAAGCGGAAAAAACATATATTCTGCATGGTATACAGAAAAACA 139
                      ************************************************************

consensus_9206#0      TGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAG 240
consensus_9206#1      TGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAACTCGAATCAGAGATAG 170
consensus_9206#2      TGAGGAACGATGGGCGAACGAATCGCGACTATCGGCCGATGGAATTCGAATCAGAGATAG 199
                      ******************************************** ***************

consensus_9206#0      TCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAG 300
consensus_9206#1      TCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAG 230
consensus_9206#2      TCGTCCATGCAGCCGGATCCGCGAGACTGCGTCTGGCTAACACGGACATACTGGTAGGAG 259
                      ************************************************************

consensus_9206#0      TAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTT 360
consensus_9206#1      TAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTT 290
consensus_9206#2      TAAAGGCAGAAATTGATACGCCTAATCCTGATCGACCCAACGAGGGAAAGGTGGACTTTT 319
                      ************************************************************

consensus_9206#0      TCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAA-CTA 419
consensus_9206#1      TCATCGATTGCTCGGCAAACGCAACTCCTGAATTCGAAGGCCGAGGTGGTGAATAAACTA 350
consensus_9206#2      TCATCGATTGCTCGGCAAACGCTACTCCTGAATTCGAAGGCCGAGGTGGTGAACAA-CTA 378
                      ********************** ****************************** ** ***

consensus_9206#0      GCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTG 479
consensus_9206#1      GCGACGGAAATTTCGAACACCCTGTCTAAAGCATACGAATCTCAAAAGGGGTTCGATTTG 410
consensus_9206#2      GCGACGGAAATTTCGAATACCCTGTCCAAAGCATACGAATCTCAAAAGGGGTTCGATTTG 438
                      ***************** ******** *********************************

consensus_9206#0      GCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATT 539
consensus_9206#1      GCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATT 470
consensus_9206#2      GCTGGCCTGTGCATTATGGCGGGCCACCAATGCTGGAAACTGTACGTCGATGTGTTGATT 498
                      ************************************************************

consensus_9206#0      CTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTC 599
consensus_9206#1      CTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTC 530
consensus_9206#2      CTAGAGTGTGGTGGAAATTTATTCGACGCCGTCTCGCTAGCCGTGAAGGGCGCATTGTTC 558
                      ************************************************************

consensus_9206#0      AATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATT 659
consensus_9206#1      AATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATT 590
consensus_9206#2      AATACTAGGATACCGCGTGTTTCAACAGCAATGCATGATGGCGGCTCGATGGACTTGATT 618
                      ************************************************************

consensus_9206#0      CTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTA 719
consensus_9206#1      CTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTA 650
consensus_9206#2      CTGACCGACGATCCGTACGACTGTGAGCGATTAGACGTTACGACTGCGCCCATCCTAGTA 678
                      ************************************************************

consensus_9206#0      ACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGT 779
consensus_9206#1      ACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGT 710
consensus_9206#2      ACGGTGTGCAAGATCGGAGACCAGTGCGTCGTGGATCCGTCGGCCGAAGAGGAAGAATGT 738
                      ************************************************************

consensus_9206#0      AGCGTACCAAGCGTAGGGTGGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCACCAAA 839
consensus_9206#1      AGCGTAGCAAGCGTAGCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAA 770
consensus_9206#2      AGCGTAGCAAGCGTAGCGGTGGGGGTTTCCTGCCGCCCTGATGGGAATACAACCCCCAAA 798
                      ****** ********* *  ********************************** *****

consensus_9206#0      CAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAA 899
consensus_9206#1      CAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAA 830
consensus_9206#2      CAGTCCATAACTACGGTGCGTACCTCCGGGGAAGGATCAATACGCTTGGAAACGCTGAAA 858
                      ************************************************************

consensus_9206#0      AAGTGCTTCGACACGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCA 959
consensus_9206#1      AAGTGCTTCGACACGGCAACCACCGTAGGCCCCTCCCTCAACAAAGCATTGATGAAAGCA 890
consensus_9206#2      AAGTGCTTCGACACGGCAACCACCGTAGGCGCCTCCCTCAACAAAGCATTGATGAAAGCA 918
                      ****************************** *****************************

consensus_9206#0      CTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTT 1019
consensus_9206#1      CTGCATGAGGATGAAACTAGAAATTCGAAGGGATTGGGCAAGCGTGAAATTTACGGGTTT 950
consensus_9206#2      CTGCATGAGGATGAAACTAGAAA----GAAACTTTCAATAAAAA---------------- 958
                      ***********************     *    **    **                   

consensus_9206#0      TTGAAATAAATCTTTGCAACGAAAAAAAAAAAAAA 1054
consensus_9206#1      TTGAAATAAATCTT------GAAAAAACTC----- 974
consensus_9206#2      -----------------------------------
                                                         




Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner    (hubert.wassner@noos.fr)