These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9216#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 11 consensus length = 1334 fasta sequence [CCGAACATATCTCATCAAAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCAGGATTGTGCAAGGAAATCCCCCTCTTGCGAGTGCTTTTTGTCAATATCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG-GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT-GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC-GGATTC-GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC-GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACAGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCACCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTGATTTTTTTTTAATTGTGATTCCCGTACAGCGCG-CTTGCTGGGCTGGGATAGTTCCACCCTCGGTGAGGCAGTTGGGTCGCTTCTCTCATACAGAAAAACATAAACTCATGCGACGTCGGAAGAGGAAGTAACGTTTTGATTATTTGAAGAAAAAAAAATCCATTTTCTTGATAAGTAAGTCCTAACACCCTCGAATGTCTTATCGGCCGGCAAGGAGAGTGATCGTACAAACACGAGTGTGCTGCTGCTGCTGCTGCTGCTACCGTCGATTTGAACGATCATCCATTCCTTCTTGCCTTTCGAAAAAATGACTGGAGCTGCTGTCCTAGAGAATCCAAAATTTGAAGAAACGACATGAAAAAAAAAGAACTTGCGCAGCTTCTGTATGTAAAAAGGCAAAATATCGCTCCCCCTTATAAACCATGAACTAACCTACCACGAACAAGTAAGTGTAAACACAAT] [+] EMBL BM629562 [CCGAACATATCTCATCAAAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCACGATTGTGCAAGGAAATCCCTCTCTAGCGAGTGCTTTTTGTCGATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTCTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCT ] [+] EMBL BM580717 [ ccgAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCAGGATTGTGCAAGGAAATCCCCCACTTGCGAGTGCTTTTTGTCAATACCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCATGGGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCCGGGGGTACGC ] [+] EMBL CNS09LHY [ ACGGAGAACAAAAAACGGAAAAACATCAGGATTGTGCAAGGAAATCCCCCACTTGCGAGTGCTTTTTGTCAATACCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACGCGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCCCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACAGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCGCCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTGAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTGATTTTTTTTTAATTGTGATTCCCGTACAGCGCG CTTGCTGGGCTGGGATAGTTCCACCC ] [+] EMBL BM587207 [ ccgCAGGATTGTGCAAGGAAATCCCCCACTTGCGAGTGCTTTTTGTCAATACCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACAGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTG ] [+] EMBL BX606906 [ TGCAAGGAAATCCCCCTCTTGCGAGTGCTTTTTGTCAATATCTGTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAA ] [+] EMBL BM605040 [ ccGCAAGGAAATCCGTCTCTTGCGAGTGCTTTTTGTCAATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTCTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCT ] [+] EMBL BX616114 [ GTGTCTTGTGTTCCGCCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACGGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCACCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTC ] [+] EMBL BM618151 [ ACGCAACCAAAGGAAAGTGAAACG GCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAGCAAACACGCATCACAATGGCGATAATCGAAAGCATTCGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGGTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTCTACCCGAAATCGATCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAGCGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGCGGTAGAGGCATCAAGGTGTTTCTCTTCACCGGGAGTCGGGGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCAT ] [+] EMBL BX615770 [ CGCCAGGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCGACGGTGGTAGCAGCACTGCTGTTCTTCTCCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCCCGACGGAGAGCGATTATTTGGGCAACTTCTAAGTGGGTCAGCCTGATGAACTGACCACCCATCGTGTCGGATACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTG ] [+] EMBL BX618169 [ CCGAAATCGTTCAACTTTTCCTACTACATCTGCGGTATCCTAGGGACGATCAGCTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCAT GGGTGGTAGAGGCATCAAGGTGTTTCTCTTCACC GGATTC GTGCTCGGCTTCACCTCGATTATCGCCACCATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCC GGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGTCCCC ] [-] EMBL CNS09LHZ [ TCCACGCTTCAAATTCCTACCCCCCCATTAGTCGCGGTGATTTTTTTTTAATTGTGATTCCCGTACAGCGCGACTTGCTGGGCTGGGATAGTTCCACCCTCGGTGAGGCAGTTGGGTCGCTTCTCTCATACAGAAAAACATAAACTCATGCGACGTCGGAAGAGGAAGTAACGTTTTGATTATTTGAAGAAAAAAAAATCCATTTTCTTGATAAGTAAGTCCTAACACCCTCGAATGTCTTATCGGCCGGCAAGGAGAGTGATCGTACAAACACGAGTGTGCTGCTGCTGCTGCTGCTGCTACCGTCGATTTGAACGATCATCCATTCCTTCTTGCCTTTCGAAAAAATGACTGGAGCTGCTGTCCTAGAGAATCCAAAATTTGAAGAAACGACATGAAAAAAAAAGAACTTGCGCAGCTTCTGTATGTAAAAAGGCAAAATATCGCTCCCCCTTATAAACCATGAACTAACCTACCACGAACAAGTAAGTGTAAACACAAT] consensusID : consensus_9216#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 1178 fasta sequence [GGTTAAATGGAGAACAAAAAACGGACCAACATCACGATTGTTCAATGGAAATCCCTCTCTACGAGTGCTTTTTGTCGATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACTGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCAAAGAAACAAACAAACAATCACAATGGGATAATCGAAAGCATACCCAGGGTNGTGGTCAATGGTTCCCCGAAAACGATCCTTGCGACGGTGGTAGCAGCACGTGTGTACTTTCCTNCCGGATGGTGGATCCATCCATCGANACGGGATACCGGTCTACCCCGAAAATCGGTCAANTTATACCCTAACATACATACTTGGCGGTATCCTAAGGGACGATCCAGCTTNCACTCATNGNNTGACTGCTTGTCAACAAACGCAANATTGTNCAGCNGCGCTCCCCAANTAACAACGGGGAGNGTNATCACATTTNGACGCGGCAGAGGNATACNAGGTGTATCTCTATCACCGGNAATNTACGNATGGTCGGGAGGNATACCANCCTCGAATCAGTNATGCCACCCAANCATGGGAANAACTGNCNTGGGCGAAGTAACNNGAGGAAACGAAGNTGAGAGACCNGNACAAGNACACCCGGGGGATAAGGACATGNGCAATGGAGAACAGGGTGTACCCACAATCCATAAAGACAGCCATNAAGNAACAAANNNANTGTGGCCCCAGACGGNNTAAGTAAGAAGTGATACNNAAGANAAGNAGCAGNAAANANTAGNCGCGCACGGGCTGNTGTAGGATCAAGTGCCACGAAAGAAATAAAGCNANGGGCNNACGAGAAGNNAANAGAAGGGGTAGNANAACACGCAGAACAGTGNNAACAAANACNNACACNGAANACACGGAGGAGCCNANCCGAAGAGGGGAAAAGANCNNGAAATGCAAAAGAANGGACNANAANAAAANGCANCANNAAGCAGGNCACAAGNCACGCACGGANAGCAAAGCCANCCGAGCGACGAGNANATGCNACAAGNNNNAGAGNAAGGCACGGANGGNNCNAGNNCCGGGAGCNGNGAAACGGGCGNGCGAGNAGAGGGNGAGAGGACNGCTGGCGGGGNNTGGGGNGGGGTGNNGNCNAGGCGCGGGCNGA] [+] EMBL AL696467 [GGTTAAATGGAGAACAAAAAACGGACCAACATCACGATTGTTCAATGGAAATCCCTCTCTACGAGTGCTTTTTGTCGATATCTGTGTCTTGTGTTCCGTCAAAGTTACAGAATAGTTGACGCAACCAAAGGAAAGTGAAACTGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCAAAGAAACAAACAAACAATCACAATGGGATAATCGAAAGCATACCCAGGGTNGTGGTCAATGGTTCCCCGAAAACGATCCTTGCGACGGTGGTAGCAGCACGTGTGTACTTTCCTNCCGGATGGTGGATCCATCCATCGANACGGGATACCGGTCTACCCCGAAAATCGGTCAANTTATACCCTAACATACATACTTGGCGGTATCCTAAGGGACGATCCAGCTTNCACTCATNGNNTGACTGCTTGTCAACAAACGCAANATTGTNCAGCNGCGCTCCCCAANTAACAACGGGGAGNGTNATCACATTTNGACGCGGCAGAGGNATACNAGGTGTATCTCTATCACCGGNAATNTACGNATGGTCGGGAGGNATACCANCCTCGAATCAGTNATGCCACCCAANCATGGGAANAACTGNCNTGGGCGAAGTAACNNGAGGAAACGAAGNTGAGAGACCNGNACAAGNACACCCGGGGGATAAGGACATGNGCAATGGAGAACAGGGTGTACCCACAATCCATAAAGACAGCCATNAAGNAACAAANNNANTGTGGCCCCAGACGGNNTAAGTAAGAAGTGATACNNAAGANAAGNAGCAGNAAANANTAGNCGCGCACGGGCTGNTGTAGGATCAAGTGCCACGAAAGAAATAAAGCNANGGGCNNACGAGAAGNNAANAGAAGGGGTAGNANAACACGCAGAACAGTGNNAACAAANACNNACACNGAANACACGGAGGAGCCNANCCGAAGAGGGGAAAAGANCNNGAAATGCAAAAGAANGGACNANAANAAAANGCANCANNAAGCAGGNCACAAGNCACGCACGGANAGCAAAGCCANCCGAGCGACGAGNANATGCNACAAGNNNNAGAGNAAGGCACGGANGGNNCNAGNNCCGGGAGCNGNGAAACGGGCGNGCGAGNAGAGGGNGAGAGGACNGCTGGCGGGGNNTGGGGNGGGGTGNNGNCNAGGCGCGGGCNGA] consensusID : consensus_9216#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 741 fasta sequence [GCAGATCCCCCGAGGTTATTGACGCAACCAAAGGAAAGTGAAACGGTCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCTACAATGGCGATAATCGAAAGCATTCGCCAGCGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGGCGACGGTGGTAGCAGCACTGCTGTTCTTCTACCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCGAAATCGTTCAACTTTTCCTACTACATCTTGCGGTATCCTAGGGACGATCAGCGTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCATGGGCTGGTAGAGGCATCAAGGTGTTTCTCTTCACCGGATTCGTGCTCGGCTTCACCTCGATTATCGGCACATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCCGGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCAACCTGATCTACAAGTTNGGTACCCCCGACGGAGAGCGACNTCATCTGGGCAACTTCTAAGTGGGTCAGCCTGATGCAACTGACCAACCATCCGTGTCGGATTACATCCATGAATCATCCGACACCATCAACGACGCTGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACAGCTTCAAA] [+] EMBL AL692783 [GCAGATCCCCCGAGGTTATTGACGCAACCAAAGGAAAGTGAAACGGTCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAACGAAACAAACAAACACACATCTACAATGGCGATAATCGAAAGCATTCGCCAGCGCGTACTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGGCGACGGTGGTAGCAGCACTGCTGTTCTTCTACCGGATGGTGGATCATCATCGACACGGCATCGGTGTACCGAAATCGTTCAACTTTTCCTACTACATCTTGCGGTATCCTAGGGACGATCAGCGTTCATCATGGTGAATGCTGTAACGAACGAAATGCTTCACGGCGCTCCCAATTACACGGGCGGTATCATGGGCTGGTAGAGGCATCAAGGTGTTTCTCTTCACCGGATTCGTGCTCGGCTTCACCTCGATTATCGGCACATCTGGATTATGATTGCCGAGTTTACCGTGAACGAGTCGCGAACCGACAAGTACCCGGGGTACGCTCTGCTCATGCACAACGTGTTCATCTTCCTAGCCAACCTGATCTACAAGTTNGGTACCCCCGACGGAGAGCGACNTCATCTGGGCAACTTCTAAGTGGGTCAGCCTGATGCAACTGACCAACCATCCGTGTCGGATTACATCCATGAATCATCCGACACCATCAACGACGCTGGTAAACCGTACTTTAAATAGGTGTCCTTACACCATCCACAGCTTCAAA] consensusID : consensus_9216#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 702 fasta sequence [GCAAGAATCCCCCGAGGTTTNANATGGTNAACAGAAAACGGCATGACATCACGATTGTGCAAGGAAATCCCTCTCTAGACGAGTGCTTTTTGTCGATATCTGTGTCTTGTAGTATCCTGTCCAAGTTACATGAATAGTATGACGGCAACAAAGTGAAAGTGAAGACTGGACACTTGTACTGATTTGCCATATTCTATGAGCTGCGAACCAACACTAACCANCACAACGAAACAAACAAACACACATCACAATGGCGATAATCTGAAAGCATTCTGCCAGGCGTACTTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCTGACNGTGTGGTAGCAGCACTGCTGTTCTTCTCCTGGNATGTGTGGATCATCATCGACACGGCGATCTGGTCTACCCTGAAATCGTTCAACTTTCTACCTACTACATCTGGCGTATCCTAAAGGACTGATCAGCTANACCATNCATGGTTGAATGCTTGTAAACGAACGAAATGNTNATACAACTGGGCAGNCTACACCCCAAANATAACCACTGCGTGCCTGTGTTAATACCATAGGTCACTGCGCTCAGCAGTGCCATACAANTGNTTGTATACNCTCCTATACTAAACTGGGATAACCGATAGCNACTGAGCTATCCACCCTCCNGAATCCTATACGGCCCACACAATACATTGGGATTCATTGATCTGCCCGAAGAN] [+] EMBL AL931659 [GCAAGAATCCCCCGAGGTTTNANATGGTNAACAGAAAACGGCATGACATCACGATTGTGCAAGGAAATCCCTCTCTAGACGAGTGCTTTTTGTCGATATCTGTGTCTTGTAGTATCCTGTCCAAGTTACATGAATAGTATGACGGCAACAAAGTGAAAGTGAAGACTGGACACTTGTACTGATTTGCCATATTCTATGAGCTGCGAACCAACACTAACCANCACAACGAAACAAACAAACACACATCACAATGGCGATAATCTGAAAGCATTCTGCCAGGCGTACTTGGTTCGAAGTGCTTCCCCGAAGAACGATCCTTGCTGACNGTGTGGTAGCAGCACTGCTGTTCTTCTCCTGGNATGTGTGGATCATCATCGACACGGCGATCTGGTCTACCCTGAAATCGTTCAACTTTCTACCTACTACATCTGGCGTATCCTAAAGGACTGATCAGCTANACCATNCATGGTTGAATGCTTGTAAACGAACGAAATGNTNATACAACTGGGCAGNCTACACCCCAAANATAACCACTGCGTGCCTGTGTTAATACCATAGGTCACTGCGCTCAGCAGTGCCATACAANTGNTTGTATACNCTCCTATACTAAACTGGGATAACCGATAGCNACTGAGCTATCCACCCTCCNGAATCCTATACGGCCCACACAATACATTGGGATTCATTGATCTGCCCGAAGAN] consensusID : consensus_9216#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 498 fasta sequence [NGCCGAGGTTTANTGGTGACGAAAACGGCATGACATCACGATTGTGCAAGGAANATCCCTCTCTAGCGAGTGCTTGAGTCGATATCTGGGTCTTGTGTTCCGTCCAGAGTTACAGAATAGTTGAGGCAANCAAAGGAAAGTGAAACGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAAGAAACAAACAAACACACATCACAANTGGCGATAATCGAAGAGCACTTCGCAGGACGTACTGGTTCGAGAGTGTTTCCCCGAAGAACAGATCCTATGCGACAGGTGGTACGCAGCACTGCTGTAACTTCTCCGGATGGTGGATCATCATACGACTACGGCATCGGTCTACCCGAGAATCGTTACAACTTTACCTAGCTACATCTGCGGCATCCTACGGACGATCAGCTTCACTACATGGTGAATGCTGTANCGAACGAAATGCTTCACGGACGCTCCCAATTACACGGGCTGGTATCAC] [+] EMBL AL931869 [NGCCGAGGTTTANTGGTGACGAAAACGGCATGACATCACGATTGTGCAAGGAANATCCCTCTCTAGCGAGTGCTTGAGTCGATATCTGGGTCTTGTGTTCCGTCCAGAGTTACAGAATAGTTGAGGCAANCAAAGGAAAGTGAAACGGCACACGGTACGATTGCCATTTCTTGAGCGCGAACCAACACTACCCACCACAAGAAACAAACAAACACACATCACAANTGGCGATAATCGAAGAGCACTTCGCAGGACGTACTGGTTCGAGAGTGTTTCCCCGAAGAACAGATCCTATGCGACAGGTGGTACGCAGCACTGCTGTAACTTCTCCGGATGGTGGATCATCATACGACTACGGCATCGGTCTACCCGAGAATCGTTACAACTTTACCTAGCTACATCTGCGGCATCCTACGGACGATCAGCTTCACTACATGGTGAATGCTGTANCGAACGAAATGCTTCACGGACGCTCCCAATTACACGGGCTGGTATCAC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9216#1 --------------------GGTTAAATGGAGAACAAAAAACGGACCAACATCACGATTG 40 consensus_9216#3 ---GCAAGAATCCCCCGAGGTTTNANATGGTNAACAGAAAACGGCATGACATCACGATTG 57 consensus_9216#4 --------------NGCCGAGGTTTANTGGTGAC--GAAAACGGCATGACATCACGATTG 44 consensus_9216#0 CCGAACATATCTCATCAAAGCAGAAAACGGAGAACAAAAAACGGAAAAACATCAGGATTG 60 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 TTCAATGGAAATCCCTCTCTA--CGAGTGCTTTTTGTCGATATCTGTGTCTTGTG---TT 95 consensus_9216#3 TGCAA-GGAAATCCCTCTCTAGACGAGTGCTTTTTGTCGATATCTGTGTCTTGTAGTATC 116 consensus_9216#4 TGCAAGGAANATCCCTCTCTAG-CGAGTGCTTGA-GTCGATATCTGGGTCTTGTG---TT 99 consensus_9216#0 TGCAAGGAAATCCCCCTCTTG--CGAGTGCTTTTTGTCAATATCTGTGTCTTGTG---TT 115 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 CCGTCAA-AGTTACA-GAATAGT-TGACG-CAACCAAAGGAAAGTGAAACTGGCACACG- 150 consensus_9216#3 CTGTCCA-AGTTACATGAATAGTATGACGGCAACAAAGTGAAAGTGAAGACTGGACACTT 175 consensus_9216#4 CCGTCCAGAGTTACA-GAATAGT-TGAGG-CAANCAAAGGAAAGTGAAA-CGGCACACG- 154 consensus_9216#0 CCGCCAA-AGTTACA-GAATAGT-TGACG-CAACCAAAGGAAAGTGAAACGG-CACACG- 169 consensus_9216#2 --GCAGA-TCCCCCG-AGGTTAT-TGACG-CAACCAAAGGAAAGTGAAACGGTCACACG- 53 * * * * * *** * *** ** ********* **** consensus_9216#1 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCAAA--GAAACAAA 203 consensus_9216#3 GTACTGATTTGCCATATTCTATGAGCTGCGAACCAACACTAACCANCACAACGAAACAAA 235 consensus_9216#4 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCACAA-GAAACAAA 208 consensus_9216#0 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCACAACGAAACAAA 224 consensus_9216#2 GTACGA--TTGCCAT-TTCT-TGAGC-GCGAACCAACACTACCCACCACAACGAAACAAA 108 **** ******* **** ***** ************** *** ** * ******** consensus_9216#1 CAAACA---ATC-ACAAT-GG-GATAATC-GAAAGCATAC--CCAGGGTNG--TGGTC-- 250 consensus_9216#3 CAAACACACATC-ACAAT-GGCGATAATCTGAAAGCATTCTGCCAGGCGTACTTGGTTCG 293 consensus_9216#4 CAAACACACATC-ACAANTGGCGATAATCGAAGAGCACTTCGCAGGACGTACTGGTTCGA 267 consensus_9216#0 CAAACACACATC-ACAAT-GGCGATAATC-GAAAGCATTC-GCCAG-GCGTACTGGTTCG 279 consensus_9216#2 CAAACACACATCTACAAT-GGCGATAATC-GAAAGCATTC-GCCAGCGCGTACTGGTTCG 165 ****** *** **** ** ******* * **** * * * * consensus_9216#1 -AATGGTTCCCCGAA-AAC-GATCCTTGC-GACGGTG--GTA-GCAGCACGTGTGTACTT 303 consensus_9216#3 AAGTGCTTCCCCGAAGAAC-GATCCTTGCTGACNGTGTGGTA-GCAGCACTGCTGTTCTT 351 consensus_9216#4 GAGTGTTTCCCCGAAGAACAGATCCTATGCGACAG-GTGGTACGCAGCACTGCTGTAACT 326 consensus_9216#0 AAGTGCTTCCCCGAAGAAC-GATCCTTG-CGACGGTG--GTA-GCAGCACTGCTGTTCTT 334 consensus_9216#2 AAGTGCTTCCCCGAAGAAC-GATCCTTGGCGACGGTG--GTA-GCAGCACTGCTGTTCTT 221 * ** ********* *** ****** *** * * *** ******* *** * consensus_9216#1 TCCTNCCGGATGGTGGATCCATCCATCGANACGGGATACCGGTCTACCCCGAAAATCGGT 363 consensus_9216#3 CTCCTGGNATGTGTGGATCA--TCATCGACACGGCGATCTGGTCTACCCTGAAA-TCGTT 408 consensus_9216#4 TC--TCCGGATGGTGGATCATCATACGACTACGGCAT--CGGTCTACCC-GAGAATCGTT 381 consensus_9216#0 CT---CCGGATGGTGGATCA--TCATCGACACGGCAT--CGGTGTACCC--GAAATCGTT 385 consensus_9216#2 CT--ACCGGATGGTGGATCA--TCATCGACACGGCAT--CGGTGTACC---GAAATCGTT 272 ******* * **** *** **** * *** * consensus_9216#1 -CAANTTATACCCTAACATACATACTTGGCGGTATCCTAAGGGACGATCCAGCT-TNCAC 421 consensus_9216#3 -CAACTT----TCTACCTACTACATCTGGCG-TATCCTAAAGGACTGATCAGCTANACCA 462 consensus_9216#4 ACAACTTT--ACCTAGC---TACATCTG-CGGCATCCTAC-GGACGA-TCAGCT--TCAC 431 consensus_9216#0 -CAACTT------TTCCTACTACATCT-GCGGTATCCTAG-GGACGA-TCAGC---TTCA 432 consensus_9216#2 -CAACTT------TTCCTACTACATCTTGCGGTATCCTAG-GGACGA-TCAGCG--TTCA 321 *** ** * * * * * ** ****** **** **** consensus_9216#1 TCATNGNNTGACTGCTTGTCAACAAACGCAANATTG-TNCAGCNGCGCTCCCCAANTAAC 480 consensus_9216#3 TNCATGGTTGAATGCTTGTAAACGAACGAAATGNTNATACAACTGGGCAGNCTACACCCC 522 consensus_9216#4 TACATGGT-GAATGCT-GT-ANCGAACGAAATGCTT---CACGGACGCTCCCAATTACAC 485 consensus_9216#0 TCA-TGGT-GAATGCT-GT-AACGAACGAAATGCTT----CACGGCGCTCCCAATTACAC 484 consensus_9216#2 TCA-TGGT-GAATGCT-GT-AACGAACGAAATGCTT----CACGGCGCTCCCAATTACAC 373 * * ** **** ** * * **** ** * ** * * * consensus_9216#1 AACGGGGAGNGTNATCACATTTNGACGCGGCAGAGGNATACNAGGTGTATCTCTATCACC 540 consensus_9216#3 A------AANATAACCAC--TGCGTGCCTGTGTTAATACCATAGGT-CACTGCGCTCAGC 573 consensus_9216#4 G-----GGCTGGTATCAC------------------------------------------ 498 consensus_9216#0 G------GGCGGTATCA-----TGGGC-GGTAGAGGCAT-CAAGGTGTTTCTCT-TCACC 530 consensus_9216#2 G------GGCGGTATCA-----TGGGCTGGTAGAGGCAT-CAAGGTGTTTCTCT-TCACC 420 * ** consensus_9216#1 GGNAATNTACGNATGGTCGGGAGGNATACCANCCTCGAATCAGTNATGCCACCCAANCAT 600 consensus_9216#3 AGTGCCATACAANTGNTTG-----TATACNCTCCTATACTAAACTGGGATAACCGAT--- 625 consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 GGATTCGTGCTCGGCTTCACCTCGATCATCGCCACCATCTGGATTATGATTGCCGAGT-T 589 consensus_9216#2 GGATTCGTGCTCGGCTTCACCTCGATTATCGGCAC-ATCTGGATTATGATTGCCGAGT-T 478 consensus_9216#1 GGGAANAACTGNCNTGGGCGAAGTAACNNGAGGAAACGAAGNTGAGAGACCNGNACAAGN 660 consensus_9216#3 ---AGCNACTGAGCTATCC-----ACCCTCCNGAATC----CTATACGGCCCACACAA-T 672 consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 TACCGTGAACGAGTCGCGA-----ACCGACAAGTACCC--GGGGTACGCTCTGCTCATGC 642 consensus_9216#2 TACCGTGAACGAGTCGCGA-----ACCGACAAGTACCC--GGGGTACGCTCTGCTCATGC 531 consensus_9216#1 ACACCCGGGGGATAAGGACATGNGCAATGGAGAACAGGGTGTACCCACAATCCATAAAGA 720 consensus_9216#3 ACATT-GGGATTCATTGATCTGCCCGAAGAN----------------------------- 702 consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 ACAAC--GTGTTCATCTTCCTAGCCACCCTGATCTACAAGTTTGGT-CCCCCGACAGAGA 699 consensus_9216#2 ACAAC--GTGTTCATCTTCCTAGCCAACCTGATCTACAAGTTNGGTACCCCCGACGGAGA 589 consensus_9216#1 CAGCCAT-NAAGNAACAAANNNANTGTGGCCCCAGACGGNNTAAGTAAGAAGTGATACNN 779 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 GCGATT--ATTTGGGCAACTTCTAAGTGGGTCAGCCTGATG-AACTGACCACCCATC-GT 755 consensus_9216#2 GCGACNTCATCTGGGCAACTTCTAAGTGGGTCAGCCTGATGCAACTGACCAACCATCCGT 649 consensus_9216#1 AAGANAAGNAGCAGNAAANANTAGNCGCGCACGGGCTGNTGTAGGATCAAGTGCCACGAA 839 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 GTCGGAT-ACATCCATGAATCATCCGAAACCATCAACGACGCTGGGTAAACCGT-ACTTT 813 consensus_9216#2 GTCGGATTACATCCATGAATCATCCGACACCATCAACGACGCTGG-TAAACCGT-ACTTT 707 consensus_9216#1 AGAAATAAAGCNANGGGCNNACGAGAAGNNAANAGAAGGGGTAGNANAACACGCAGAACA 899 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 AAATAGGTGTCCTTACACCATCCAC-GCTTCAAATTCCTACCCCCCCATTAGTCGCGGTG 872 consensus_9216#2 AAATAGGTGTCCTTACACCATCCACAGCTTCAAA-------------------------- 741 consensus_9216#1 GTGNNAACAAANACNNACACNGAANACACGGAGGAGCCNANCCGAAGAGGGGAAAAGANC 959 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 ATTTTTTTTTAATTGTGATTCCCGTACAGCGCGCTTGCTGGGCTGGGATAGTTCCACCCT 932 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 NNGAAATGCAAAAGAANGGACNANAANAAAANGCANCANNAAGCAGGNCACAAGNCACGC 1019 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 CGGTGAGGCAGTTGGGTCGCTTCTCTCATACAGAAAAACATAAACTCATGCGACGTCGGA 992 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 ACGGANAGCAAAGCCANCCGAGCGACGAGNANATGCNACAAGNNNNAGAGNAAGGCACGG 1079 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 AGAGGAAGTAACGTTTTGATTATTTGAAGAAAAAAAAATCCATTTTCTTGATAAGTAAGT 1052 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 ANGGNNCNAGNNCCGGGAGCNGNGAAACGGGCGNGCGAGNAGAGGGNGAGAGGACNGCTG 1139 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 CCTAACACCCTCGAATGTCTTATCGGCCGGCAAGGAGAGTGATCGTACAAACACGAGTGT 1112 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 GCGGGGNNTGGGGNGGGGTGNNGNCNAGGCGCGGGCNGA--------------------- 1178 consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 GCTGCTGCTGCTGCTGCTGCTACCGTCGATTTGAACGATCATCCATTCCTTCTTGCCTTT 1172 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 ------------------------------------------------------------ consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 CGAAAAAATGACTGGAGCTGCTGTCCTAGAGAATCCAAAATTTGAAGAAACGACATGAAA 1232 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 ------------------------------------------------------------ consensus_9216#3 ------------------------------------------------------------ consensus_9216#4 ------------------------------------------------------------ consensus_9216#0 AAAAAAGAACTTGCGCAGCTTCTGTATGTAAAAAGGCAAAATATCGCTCCCCCTTATAAA 1292 consensus_9216#2 ------------------------------------------------------------ consensus_9216#1 ------------------------------------------ consensus_9216#3 ------------------------------------------ consensus_9216#4 ------------------------------------------ consensus_9216#0 CCATGAACTAACCTACCACGAACAAGTAAGTGTAAACACAAT 1334 consensus_9216#2 ------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||