These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9233#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1885 fasta sequence [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG-GTGG---G-TGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGGCGCATTCTGCTGCGGCTGGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGCGGCTGCTCGGCTGCTGCATGGCGCTGGCCTGGAAGCCGTTCCTGCTGGCGGCACCGGCCTTCTGGCTGTCCGCCTGCCTGTGGATGTTCTGGAAGCTGATAGCGCTGCCGCTGGCCGGCCTGAAGTGGGCCCTGGTCGCGCTGCACACGCCCGCCCACGAGCGCAACCGCCGCAAGCGAACGATCCTGATCAGCTGCGGCAGCACGATCCAGACGCTGCATCTCGCGCGCAACTTCTACAAGTCCGGTGCGCGCGTCGTCGTGTTCGAGTTCGAGGGTCTGTTCGCGCTCGCCCGCTTCTCGACCGCCGTCAGCAAGTTCTACGCGATCCAGCGGCCCACGCCCGAGACGGTCGGCGAGTACATAGCGGCCCTGTGCGAGATCGTCGAGAAGGAGCAGCCGACCCACTACATACCGGTGTGCGCCACGAGCCCGGCGCACTACGATGCCCTCGCCAAGCCGCACCTGGAGCTGCGCGGCTGCTCCAGCTTCATCCCGGGCGCGCAGGAAACGTCCGTGCTGGACGACATCCTGCAGGTGATGCGCAAATGCGAAGCGAACGAGATACAGCTCCCGCCGCACCAGATCGTGTCGTCCAAGGAGGAACTGGCCCGCCTGTACGACGAGCGGCTGGCTTGGCCGGGTTCCGCAACGTGATGGTCGCTTCCGGGGCGCTCGGGCTGCTCGAGCGCAGCAAGTACGTCCTGCCGGCCAATCGGCGCGATCTGCGCCTCAACTACGAGGTGAGCGAGGCACAAAAGTGGGTCGTCATACGGGACGTGATCGGGTCGCACTACGTCACCTGCACCACGGTGAAGGATTCGGCCGTGATCGCGAACGTGACGTGCGCGATCCAGGCGGACACGCGCAGCCTGGTGCCGGAGGAGAACGCCGCGATCGACCGGTGGCTGCAAGAGTTTTTCCGCCGCATACGGCTCCAGCGCCCGATCAACGGGCACATCAGCTTCCGGCTGGTCAAGTGCCAGTGCAGCGGGCAGATACTGCCCCTCGGCATACGGGTCGGCGTGTCGCTGCCGTACATCTGCTACACCGGCGTGCACTCGCGCGTGCTCTGCAAGCCCTGCCCGCACTTTAGCCGGCAAAACTCGGGTCCGCT] [+] EMBL BM615931 [CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCG GTGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTC ] [+] EMBL BM593422 [ cCGCGGACGCGTGG G TGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGGCGCATTCTGCTGCGGCTGGTGCTGTGGTGGCCGCTGC ] [+] EMBL BM613543 [ ccgCCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGC GGGCGCATTCTGCTGCGGCTGGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGCGGCTGCTCGGCTGCTGCATGGCGCTGGCCTGGAAGCCGTTCCTGCTGGCGGCACCGGCCTTCTGGCTGTCCGCCTGCCTGTGGATGTTCTGGAAGCTGATAGCGCTGCCGCTGGCCGGCCTGAAGTGGGCCCTGGTCGCGCTGCACACGCCCGCCCACGAGCGCAACCGCCGCAAGCGAACGATCCTGATCAGCTGCGGCAGCACGATCCAGACGCTGCATCTCGCGCGCAACTTCTACAAGTCCGGTGCGCGCGTCGTCGTGTTCGAGTTCGAGGGTCTGTTCGCGCTCGCCCGCTTCTCGACCGCCGTCAGCAAGTTCTACGCGATCCAGCGGCCCACGCCCGAGACGGTCGGCGAGTACATAGCGGCCCTGTGCGAGATCGTCGAGAAGGAGCAGCCGACCCACTACATACCGGTGTGCGCCACGAGCCCGGCGCACTACGATGCCCTCGCCAAGCCGCACCTGGAGCTGCGCGGCTGCTCCAGCTTCATCCCGGGCGCGCAGGAAACGTCCGTGCTGGACGACATCCTGCAGGTGATGCGCAAATGCGAAGCGA ] [+] EMBL BM593386 [ ccgCAGGATCGTAACCGCCGCAAGCGAACGATCCTGATCAGCTGCGGCAGCACGATCCAGACGCTGCATCTCGCGCGCAACTTCTACAAGTCCGGTGCGCGCGTCGTCGTGTTCGAGTTCGAGGGTCTGTTCGCGCTCGCCCGCTTCTCGACCGCCGTCAGCAAGTTCTACGCGATCCAGCGGCCCACGCCCGAGACGGTCGGCGAGTACATAGCGGCCCTGTGCGAGATCGTCGAGAAGGAGCAGCCGACCCACTACATACCGGTGTGCGCCACGAGCCCGGCGCACTACGATGCCCTCGCCAAGCCGCACCTGGAGCTGCGCGGCTGCTCCAGCTTCATCCCGGGCGCGCAGGAAACGTCCGTGCTGGACGACATCCTGCAGGTGATGCGCAAATGCGAAGCGAACGAGATACAGCTCCCGCCGCACCAGATCGTGTCGTCCAAGGAGGAACTGGCCCGCCTGTACGACGAGCGGCTGGCTTGGCCGGGTTCCGCAACGTGATGGTCGCTTCCGGGGCGCTCGGGCTGCTCGAGCGCAGCAAGTACG ] [+] EMBL BM630889 [ ccGGCCGGGTTCCGCAACGTGATGGTCGCTTCCGGGGCGCTCGGGCTGCTCGAGCGCAGCAAGTACGTCCTGCCGGCCAATCGGCGCGATCTGCGCCTCAACTACGAGGTGAGCGAGGCACAAAAGTGGGTCGTCATACGGGACGTGATCGGGTCGCACTACGTCACCTGCACCACGGTGAAGGATTCGGCCGTGATCGCGAACGTGACGTGCGCGATCCAGGCGGACACGCGCAGCCTGGTGCCGGAGGAGAACGCCGCGATCGACCGGTGGCTGCAAGAGTTTTTCCGCCGCATACGGCTCCAGCGCCCGATCAACGGGCACATCAGCTTCCGGCTGGTCAAGTGCCAGTGCAGCGGGCAGATACTGCCCCTCGGCATACGGGTCGGCGTGTCGCTGCCGTACATCTGCTACACCGGCGTGCACTCGCGCGTGCTCTGCAAGCCCTGCCCGCACTTTAGCCGGCAAAACTCGGGTCCGCT] consensusID : consensus_9233#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 702 fasta sequence [CCGGTGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAGGCAGATCTTGGAGTGTCCGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTGAGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCAAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCACGCTCATCCCCGAGGATCGCGAGCTGGAGAC-TGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGC-GTGTCGAGCGGGCGCATT-CTGCTGCGGCT-GGTGCTCTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGC] [+] EMBL BM643549 [CCGGTGGAACGTTGCGCGGTCAAAACCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAGGCAGATCTTGGAGTGTCCGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTGAGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCACGCTCATCCCCGAGGATCGCGAGCTGGAGAC TGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGC GTGTCGAGCGGGCGCATT CTGCTGCGGCT GGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGC] [+] EMBL BM602265 [ ccGTGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAGGCAGATCTTGGAGTGTCCGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTGAGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCAAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCACGCTCATCCCCGAGGATCGCGAGCTGGAGAC TGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGC GTGTCGAGCGGGCGCATT CTGCTGCGGCT GGTGCTCTGGTGGCCGCTGCTCCTAATTGCCGTCGCCC ] [+] EMBL BM648999 [ ccGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAGGCAGATCTTGGAGTGTCCGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTGAGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCAAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCACGCTCATCCCCGAGGATCGCGAGCTGGAGACTTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGGTGTCGAGCGGGCGCATTCCTGCTGCGGCTGGGTGCTCTGG ] [+] EMBL BM622519 [ ccGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAGGCAGATCTTGGAGTGTCCGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTGAGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCAAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCACGCTCATCCCCGAGGATCGCGAGCTGGAGAC TGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGC GTGTCGAGCGGGCGCATT CTGCTGCGGCT GGTGCTCTGGT ] [+] EMBL BM633993 [ ccgTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAGGCAGATCTTGGAGTGT CGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTGAGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCAAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCACGCTCATCCCCGAGGATCGCGAGCTGGAGAC TGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGC GTGTCGAGCGGGCGCATT CTGCTGCGGCT GGTGCTCTGGTGGCCGCTGCTCCTAATTGCCGTCGCCC ] consensusID : consensus_9233#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 675 fasta sequence [CCGGTGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAA-TTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGCGCATTCTG] [+] EMBL BM647217 [CCGGTGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAA TTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGCGCATTCTG] [+] EMBL BM649977 [CCGGTGGAACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTTCGCCCCCGATGCCAAGCTCGCCGC ] [+] EMBL BM596327 [ ccgACGTTGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAA TTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTG ] [+] EMBL BM581458 [ ccgGCGCGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATAAGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTGCGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTTGCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACA ] consensusID : consensus_9233#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 656 fasta sequence [CCGCCCACGCGTCCGGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGCGCATTCTGCTGCGGCTGGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGCGGCTGCTCGGCTGCTGCATGGCGCTGGCCTGGAAGCCGTTCCTGCTGGCGGCACCGGCCTTCTGGCTGTCCGCCTGCCTGTGGATGTTCTGGAAGCTGATAGCGCTGCCGCTGGCCGGCCTGAAGTGGGCCCTGGTCGCGCTGCACACGCCCGCCCACGAGCGCAACCGCCGCAAGCGAACGATCCTGATCAGCTGC] [+] EMBL BM606657 [CCGCCCACGCGTCCGGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGCCCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACGTCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGGCTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGAGCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCACGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGGCTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGCGCATTCTGCTGCGGCTGGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGCGGCTGCTCGGCTGCTGCATGGCGCTGGCCTGGAAGCCGTTCCTGCTGGCGGCACCGGCCTTCTGGCTGTCCGCCTGCCTGTGGATGTTCTGGAAGCTGATAGCGCTGCCGCTGGCCGGCCTGAAGTGGGCCCTGGTCGCGCTGCACACGCCCGCCCACGAGCGCAACCGCCGCAAGCGAACGATCCTGATCAGCTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9233#0 CCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGCCCACGCGTCCGGTGGGTGCG 60 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 --------------------------------------------CCGGTGGAACGTTGCG 16 consensus_9233#2 --------------------------------------------CCGGTGGAACGTTGCG 16 consensus_9233#0 CGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATA 120 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 CGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATA 76 consensus_9233#2 CGGTCAAAAGCTTGCTGAACACGCGCGTGTGTGGGCGTGTGCGTAACAACGATCGCGATA 76 consensus_9233#0 AGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTG 180 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 GGCAGATCTTGGAGTGTCCGCTCCGGCCATTGGAGCTACCACGTCCGTAACCGAAACCTG 136 consensus_9233#2 AGCAGATCTTGGAGTGTCCGCTCCGGTCATTGGAGCTACCACGTCCGTAACCGAAACCTG 136 consensus_9233#0 CGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTT 240 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 CGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTT 196 consensus_9233#2 CGCCATGTGCGAATTACTCTCCCCCGTTGCGCTCTAGTTTTCTTCCCCGATTCTCTCGTT 196 consensus_9233#0 GCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGT 300 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 GCTTTGGTGTGTGACTCCAAAGTGACTTCTGCAGAACATTAACTGTGTGTGTGTGTGTG- 255 consensus_9233#2 GCTTTGGTGTGTGACTCCAAAGTGACTTGTGCAGAACATTAACTGTGTGTGTGTGTGTGT 256 consensus_9233#0 GTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGC 360 consensus_9233#3 --------CCGCCCACGCGTCCG-GTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGC 51 consensus_9233#1 ---------------------AGAGTGATCCGCGTTAAAAAGAAAAGAGTGATAGAATGC 294 consensus_9233#2 GTGTGTGTGTGTGTGTGTGTGAGAGTGATCCGCGCTAAAAAGAAAAGAGTGATAGAATGC 316 * ********** ************************* consensus_9233#0 CCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACG 420 consensus_9233#3 CCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACG 111 consensus_9233#1 CCTCCGCCAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACG 354 consensus_9233#2 CCTCCGCAAGCAAGGACAAAATCTTCGGCCCGTGGAACCGCAGCGAAAGTACGGGCAACG 376 ******* **************************************************** consensus_9233#0 TCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGG 480 consensus_9233#3 TCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGG 171 consensus_9233#1 TCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGG 414 consensus_9233#2 TCGTGTACCTCTCGAACAACAACACGGCCGACAATTTGGCGAAAATGTTTTCCCGCACGG 436 ************************************************************ consensus_9233#0 CTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGA 540 consensus_9233#3 CTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGA 231 consensus_9233#1 CTCCATCGAGTCCGCGATGGACACCGTACGGCTCGCGGCACAATTCGCCCCCGATGCCAA 474 consensus_9233#2 CTCCATCGAGTCCGCGATGGACACCGTACGGTTCGCGGCACAATTCGCCCCCGATGCCGA 496 ******************************* ************************** * consensus_9233#0 GCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCA 600 consensus_9233#3 GCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCA 291 consensus_9233#1 GCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGTCGCAACTACTCCAGCACCTTCA 534 consensus_9233#2 GCTCGCCGCTGTCCTCCTCGCCGCCGTCGACGCTGCGCCGCAACTACTCCAGCACCTTCA 556 ************************************* ********************** consensus_9233#0 CGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGG 660 consensus_9233#3 CGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGG 351 consensus_9233#1 CGCTCATCCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGG 594 consensus_9233#2 CGCTCATTCCCGAGGATCGCGAGCTGGAGACTGTGGCGCCGTCCGCACCGCCATCAACGG 616 ******* **************************************************** consensus_9233#0 CTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGGGCGCATTCTG 720 consensus_9233#3 CTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGG-CGCATTCTG 410 consensus_9233#1 CTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCGAGCGGG-CGCATTCTG 653 consensus_9233#2 CTGCATCCACGGCAAAAGCCCCGGCATCCCAGCAGCGCGTGTCCTGCGGG-CGCATTCTG 675 ******************************************* ***** ********* consensus_9233#0 CTGCGGCTGGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGCGGCTGCTCGGC 780 consensus_9233#3 CTGCGGCTGGTGCTGTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGCGGCTGCTCGGC 470 consensus_9233#1 CTGCGGCTGGTGCTCTGGTGGCCGCTGCTCCTAATTGCCGTCGCCCAGC----------- 702 consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 TGCTGCATGGCGCTGGCCTGGAAGCCGTTCCTGCTGGCGGCACCGGCCTTCTGGCTGTCC 840 consensus_9233#3 TGCTGCATGGCGCTGGCCTGGAAGCCGTTCCTGCTGGCGGCACCGGCCTTCTGGCTGTCC 530 consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 GCCTGCCTGTGGATGTTCTGGAAGCTGATAGCGCTGCCGCTGGCCGGCCTGAAGTGGGCC 900 consensus_9233#3 GCCTGCCTGTGGATGTTCTGGAAGCTGATAGCGCTGCCGCTGGCCGGCCTGAAGTGGGCC 590 consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 CTGGTCGCGCTGCACACGCCCGCCCACGAGCGCAACCGCCGCAAGCGAACGATCCTGATC 960 consensus_9233#3 CTGGTCGCGCTGCACACGCCCGCCCACGAGCGCAACCGCCGCAAGCGAACGATCCTGATC 650 consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 AGCTGCGGCAGCACGATCCAGACGCTGCATCTCGCGCGCAACTTCTACAAGTCCGGTGCG 1020 consensus_9233#3 AGCTGC------------------------------------------------------ 656 consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 CGCGTCGTCGTGTTCGAGTTCGAGGGTCTGTTCGCGCTCGCCCGCTTCTCGACCGCCGTC 1080 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 AGCAAGTTCTACGCGATCCAGCGGCCCACGCCCGAGACGGTCGGCGAGTACATAGCGGCC 1140 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 CTGTGCGAGATCGTCGAGAAGGAGCAGCCGACCCACTACATACCGGTGTGCGCCACGAGC 1200 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 CCGGCGCACTACGATGCCCTCGCCAAGCCGCACCTGGAGCTGCGCGGCTGCTCCAGCTTC 1260 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 ATCCCGGGCGCGCAGGAAACGTCCGTGCTGGACGACATCCTGCAGGTGATGCGCAAATGC 1320 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 GAAGCGAACGAGATACAGCTCCCGCCGCACCAGATCGTGTCGTCCAAGGAGGAACTGGCC 1380 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 CGCCTGTACGACGAGCGGCTGGCTTGGCCGGGTTCCGCAACGTGATGGTCGCTTCCGGGG 1440 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 CGCTCGGGCTGCTCGAGCGCAGCAAGTACGTCCTGCCGGCCAATCGGCGCGATCTGCGCC 1500 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 TCAACTACGAGGTGAGCGAGGCACAAAAGTGGGTCGTCATACGGGACGTGATCGGGTCGC 1560 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 ACTACGTCACCTGCACCACGGTGAAGGATTCGGCCGTGATCGCGAACGTGACGTGCGCGA 1620 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 TCCAGGCGGACACGCGCAGCCTGGTGCCGGAGGAGAACGCCGCGATCGACCGGTGGCTGC 1680 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 AAGAGTTTTTCCGCCGCATACGGCTCCAGCGCCCGATCAACGGGCACATCAGCTTCCGGC 1740 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 TGGTCAAGTGCCAGTGCAGCGGGCAGATACTGCCCCTCGGCATACGGGTCGGCGTGTCGC 1800 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 TGCCGTACATCTGCTACACCGGCGTGCACTCGCGCGTGCTCTGCAAGCCCTGCCCGCACT 1860 consensus_9233#3 ------------------------------------------------------------ consensus_9233#1 ------------------------------------------------------------ consensus_9233#2 ------------------------------------------------------------ consensus_9233#0 TTAGCCGGCAAAACTCGGGTCCGCT 1885 consensus_9233#3 ------------------------- consensus_9233#1 ------------------------- consensus_9233#2 ------------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||