These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9237#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1316 fasta sequence [CCGGTTGCGCATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTGCCTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG-ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCA-CCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG-CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGC-TTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAACAGGGTAA] [+] EMBL BM582113 [CCGGTTGCGCATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTGCCTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGGAACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAA AAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCG ACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGAC ] [+] EMBL CNS08YC1 [ CGCATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTG CTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAGCGGAAGTGCCCGCGGGAAGCGTGAGCACCCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAAatat ] [+] EMBL CNS08XLY [ AGTGAGTGAGAGAGA CCTGCCCGTCCTGCCTGTGCCTGTGCTGTGTTGCCGTTTGCTAGATTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCA CCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGGGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCCGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTT ] [-] EMBL CNS08XLZ [ ccCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCCCCTGGCGGGGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGGGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACAACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACAACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCTACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGC TTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAA ] [-] EMBL CNS08H51 [ CGGCTCGTAGTGTTTTACGGTTCCCAAAAAGGCACGGCAGAGGAATTTGCCGGTCCCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGGGCTGCTGATGCTGAAGGACATCGACAAATCGTTGG CCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGGGTTCTACCACTGGATTCAAAACAACGATCTGGATATGCCCGGTTTGAATTACGCGGTGAGTGTTGTGCCGGGGCACGTTTGACCCTAAAAAAGGCGATGCAAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGGACTCCTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGGCTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCGTTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAACA ] [-] EMBL CNS08YC2 [ AAAATTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACGTACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTTTCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGGACTCTTTCGCCACTGGCCTTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATTGAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTACTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGC TTTGACCGACTACGCTTTTGTTGTGCCCGGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATATACGCTATCGTAAACGGGTAA] consensusID : consensus_9237#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 4 consensus length = 1041 fasta sequence [CCGGTTCAACGATATCGGCCACAGCAGCAACGCGGAGCGGACGACGACACACGCGGTGCCCCCGTTCTTTGTGTAGCCAAAGTGTACGCCCAAGCGCAAACGCGCCGCAAACAGTCGAACGGCAGCAGCAGCAGCAGCACACACACACACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG-ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTT] [+] EMBL BM626327 [CCGGTTCAACGATATCGGCCACAGCAGCAACGCGGAGCGGACGACGACACACGCGGTGCCCCCGTTCTTTGTGTAGCCAAAGTGTACGCCCAAGCGCAAACGCGCCGCAAACAGTCGAACGGCAGCAGCAGCAGCAGCACACACACACACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGATAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGGAACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAA AAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGA ] [+] EMBL BX629272 [ CACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACNACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACC ] [+] EMBL BX629165 [ CACACGCGCGCGCAAGGAGTGTGTGTGTAGAGCGGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTGTGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACNACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAA ] [+] EMBL BX626036 [ CTGTCTGCTATCCCATCGTGTGCTTAGACGCGG ACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAAAAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCCACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTT] consensusID : consensus_9237#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 652 fasta sequence [CCGCCCACGCGTCCGGCCAGAGAGTGAGGGAAGAAAAACAGCCAGTCTATCCGTAGCCGCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCG--GTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTGACGATGATGCCAACATCGAGGACTACTTCATCACGTGGAAGGAAAAGTTTTGGCCCACGGTTTGCGACTACTTCGGCATCGAGAGCACGGGCGAGGATGTGCTGATGCGGCAGTACCGCCTGCTGGAGCAGCCGGACGTGAG] [+] EMBL BM647999 [CCGCCCACGCGTCCGGCCAGAGAGTGAGGGAAGAAAAACAGCCAGTCTATCCGTAGGGCCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCGGTGTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTG ] [+] EMBL BM614872 [ CCGCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCG GTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTGACGATGATGCCAACATCGAGGACTACTTCATCACGTGGAAGGAAAAGTTTTGGCCCACGGTTTGCGACTACTTCGGCATCGAGAGCACGGGCGAGGATGTGCTGATGCGGCAGTACCGCCTGCTGGAGCAGCCGGACGTGAG] [+] EMBL BM596928 [ CCG CGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAATTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCG GTGTGTGTAGTGTTTCGCTCGCTCGGAGAAGCTGAGGGGGCAAAGGTGGACTTTACACACAAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGGTGCGCGACAGAGCTGCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGCAATGTTTGCCCCGCATACAGCAGCTGCTGCTGGACCACCGTGGCAAGTTTCGGAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCGGTCTGGGTGACGATGATG ] consensusID : consensus_9237#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 589 fasta sequence [CCCACGGTTTATGTTCAATCCGAGATATTCTTTTTACTACAAATCATCAACTCGCAGGACTTTACATCAAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTAGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTATGACCGAATACGCTTATTGTTGTTGCCCGGAAGAAGAAAAGAAGAAGCAACTNTAAACTGATNAAGAAAAGTACAATCACTCGATTCCGATATACGCCTATCGTCTATCCGAAANACGACGATCGTGACTGTAAACTATTGTATTTTTGTTNAACAANGTATCATTGTGCACCAGGTTCTCTTGNAGCCACTGCTTCANTGGAAGACTAGTAGCTGGACAGTCCGCATGATAGCATTACAATGGTTGTCGCATAATATGTTACCGTGTTNTCTCAAACATGTATACAGCGCCCTATATCGGACGCCTCAGTATCTGCANNATCTNTGAAACGGCGTATAATAGCTGTGATATGGTTCATTCAGCTAGNATTNAATCGTGGGTTTCGAGCCTTTTT] [+] EMBL AL693670 [CCCACGGTTTATGTTCAATCCGAGATATTCTTTTTACTACAAATCATCAACTCGCAGGACTTTACATCAAAGCCCGGCATGGGTTCAAGCTTTGGACGTGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTAGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTATGACCGAATACGCTTATTGTTGTTGCCCGGAAGAAGAAAAGAAGAAGCAACTNTAAACTGATNAAGAAAAGTACAATCACTCGATTCCGATATACGCCTATCGTCTATCCGAAANACGACGATCGTGACTGTAAACTATTGTATTTTTGTTNAACAANGTATCATTGTGCACCAGGTTCTCTTGNAGCCACTGCTTCANTGGAAGACTAGTAGCTGGACAGTCCGCATGATAGCATTACAATGGTTGTCGCATAATATGTTACCGTGTTNTCTCAAACATGTATACAGCGCCCTATATCGGACGCCTCAGTATCTGCANNATCTNTGAAACGGCGTATAATAGCTGTGATATGGTTCATTCAGCTAGNATTNAATCGTGGGTTTCGAGCCTTTTT] consensusID : consensus_9237#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 553 fasta sequence [CCGCAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGG] [+] EMBL BM636565 [CCGCAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCGACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTGCCTGGTATCTGCTCAAGGGCAAGAAAAAGGAAAGCCAAGCTAGTCAGTTTAAATCCTACTCGATCCAGCCGACGACGGTGAACACGATGACGATGGTGGAGAACTCGTTCATCAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCACGGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCATGGTCGCCGACCCAGAGGAGTGCAATATGGAAGAGCTGCTGATGCTGAAGGACATCGACAAATCGTTGGCCGTGTTTTGCTTAGCGACGTACGGCGAGGGCGACCCGACGGACAACTGCATGGAGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCGGTTTGAATTACGCGGTGTTTGGCCTTGGCAACAAAACGTACGAGCACTACAACAAGGTCGG] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9237#1 CCGGTTCAACGATATCGGCCACAGCAGCAACGCGGAGCGGACGACGACACACGCGGTGCC 60 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 ------------------------------------------------------------ consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 CCCGTTCTTTGTGTAGCCAAAGTGTACGCCCAAGCGCAAACGCGCCGCAAACAGTCGAAC 120 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 ------------------------------------------------------------ consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 GGCAGCAGCAGCAGCAGCACACACACACACACGCGCGCGCAAGGAGTGTGTGTGTAGAGC 180 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 --------------------------------------------------CCGGTTGCGC 10 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 GGCGATCGAGCGAGAGAGCGAGAGCCACCCGGTCATCTTGGCGAGCGCAGGCAGGCAGTG 240 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 ATGAAACAAGCGGCAAAGTGAGTGAGAGAGACCCTGCCCGTCCTGCCTGTGCCTGTGCTG 70 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 TGGTTTTGTGACCGAAACGACGCGCTTTTGCAAGCTGTCTGCTATCCCATCGTGTGCTTA 300 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 TGTTGCCGTTTGCTAGA---------TTTCGGGGCTGTCTGCTATCCCATCGTGTGCTTA 121 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 GACGCGGACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAA 360 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 GACGCGGACTAGGCGGGAACGAACTGTGCTAGGAACGACCCATTCAACAACAGCAACAAA 181 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 AAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCG 420 consensus_9237#4 ------------------------CCGCAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCG 36 consensus_9237#0 AAAAAAATCAAAAGATGGACGCCCAGACAGAAACGGAAGTGCCCGCGGGAAGCGTGAGCA 241 consensus_9237#3 -----------------------------------------CCCACGGTTTATGTTCAAT 19 consensus_9237#2 ------------------CCGCCCACGCGTCCG-GCCAGAGAGTGAGGGAAGAAAAACAG 41 ** consensus_9237#1 ACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTG 480 consensus_9237#4 ACGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTG 96 consensus_9237#0 CCGAACCGTTCCTCGGCCCGCTTGACATCGTCCTGCTCGTCAGTCTGCTGGCCGGCACTG 301 consensus_9237#3 CCGAGATATTCTT---TTTACTACAAATCATCA-ACTCGCAGG---ACTTTACATCAAAG 72 consensus_9237#2 CCAGTCTATCCGT-AGCCGCCGCAGCAGTGTGTTGTGTGTCAGGCGCAGGGAAGATGCAA 100 * * * * * * * * * consensus_9237#1 CCTGGTATCTGCTCAAGGGCAA----GAAAAAGGAAAGCCAAGCTAG---TCAGTTTAAA 533 consensus_9237#4 CCTGGTATCTGCTCAAGGGCAA----GAAAAAGGAAAGCCAAGCTAG---TCAGTTTAAA 149 consensus_9237#0 CCTGGTATCTGCTCAAGGGCAA----GAAAAAGGAAAGCCAAGCTAG---TCAGTTTAAA 354 consensus_9237#3 CCCGGCATGGGTTCAAGCTTTG----GA---CGTGTCTCCATACT-----TTGGACTGAC 120 consensus_9237#2 TTGAACAGGACGTTAAGTTTGCTGCCAAAGTAAGAGCTGCACGCGGGGTGCCGGTGTGTG 160 * * *** * ** * * * consensus_9237#1 TCCTACTCGATCCAGCCGACGACGGTGAA-CACGATGACGATGGTGGAGAACTCGTTCAT 592 consensus_9237#4 TCCTACTCGATCCAGCCGACGACGGTGAA-CACGATGACGATGGTGGAGAACTCGTTCAT 208 consensus_9237#0 TCCTACTCGATCCAGCCGACGACGGTGAA-CACGATGACGATGGTGGAGAACTCGTTCAT 413 consensus_9237#3 TATCTATCCGGCTATGCGTAATCAGTAAGTCACTAGGAAGCCAGTCAAG--CCCACTAGT 178 consensus_9237#2 TAGTGTTTCGCTCGCTCGGAGAAGCTGAG-----GGGGCAAAGGTGGAC--TTTACACAC 213 * * ** * * * ** * consensus_9237#1 CAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCAC 652 consensus_9237#4 CAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCAC 268 consensus_9237#0 CAAGAAGCTACAGTCCTCGGGCCGCCGGCTCGTAGTGTTTTACGGTTCCCAAACAGGCAC 473 consensus_9237#3 --AGTACAGGCAGGCTTATGACCGAATACGCTTATTGTTGTTG---CCCGGAAGAAGAAA 233 consensus_9237#2 --AAAACCTCCCCTCCGCACGCGAGATGAGTGTGCTGGCGGGCGG-TGCGCGACAGAGCT 270 * * * * * * ** * * * consensus_9237#1 GGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCAT 712 consensus_9237#4 GGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCAT 328 consensus_9237#0 GGCAGAGGAATTTGCCGGTCGCCTGGCGAAGGAAGGAATCCGCTACCAAATGAAGGGCAT 533 consensus_9237#3 AGAAGAAGCAACTNTAAACTGATNAAGAAAAGTACAATCACTCGATTCCGATATACGCCT 293 consensus_9237#2 GCTCGCGGCTAATCGCGCTCAACAGTATTCACCAGCAGTACCTTGCGCCGATCGTAGTGC 330 * * * * * * * consensus_9237#1 GGTCGCCGACCCAGAGGAGTGCAATATGGAA---GAGCTGCTGA--TGCTGAAGGACATC 767 consensus_9237#4 GGTCGCCGACCCAGAGGAGTGCAATATGGAA---GAGCTGCTGA--TGCTGAAGGACATC 383 consensus_9237#0 GGTCGCCGACCCAGAGGAGTGCAATATGGAA---GAGCTGCTGA--TGCTGAAGGACATC 588 consensus_9237#3 A-TCGTCTATCCGAAANACGACGATCGTGACTGTAAACTATTGTATTTTTGTTNAACAAN 352 consensus_9237#2 AAT-GTTTGCCCCGCATACAGCAGCTGCTGCT--GGACCACCGT-----GGCAAGTTTCG 382 * * ** * * * * * consensus_9237#1 GACAAATCGTTGGCCG-TGTTTTGCT-TAGCGACG--TACGGCG-AGGGCGACCCGACGG 822 consensus_9237#4 GACAAATCGTTGGCCG-TGTTTTGCT-TAGCGACG--TACGGCG-AGGGCGACCCGACGG 438 consensus_9237#0 GACAAATCGTTGGCCG-TGTTTTGCT-TAGCGACG--TACGGCG-AGGGCGACCCGACGG 643 consensus_9237#3 GTATCATTGTGCACCA-GGTTCTCTTGNAGCCACTGCTTCANTGGAAGACTAGTAGCTGG 411 consensus_9237#2 GAGGAAATACCTGCAGGTGTTTGGCCTTGGCAACAA-AACGTACGAGCACTACAACAAGG 441 * * * *** ** ** * * * * ** consensus_9237#1 ACAA---CTGCATGG---AGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCG 876 consensus_9237#4 ACAA---CTGCATGG---AGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCG 492 consensus_9237#0 ACAA---CTGCATGG---AGTTCTACGACTGGATTCAAAACAACGATCTAGATATGACCG 697 consensus_9237#3 ACAGT--CCGCATGAT--AGCATTACAA-TGGTTGTCGCATAAT-ATGTTACCGTGTTNT 465 consensus_9237#2 TCGGCATCTACGTGGACAAGCGTCTCGAGGAGCTCGGCGCGAACAGAGTGTTTGAGCTCG 501 * * * ** ** * * * * ** * * consensus_9237#1 GTTTGAATTACGCGGA---CTTTACATCAAGCCCGGCATG-----GGTTCAAGC-TTTGG 927 consensus_9237#4 GTTTGAATTACGCGGT---GTTTG-GCCTTGGCAACAAAA-----CGTACGAGC-ACTAC 542 consensus_9237#0 GTTTGAATTACGCGGTAAGTGTTGTGCCGGGGCACGTTTGACCCTGTTAGGGGC-GATGC 756 consensus_9237#3 CTCAAACATGTATACAGCGCCCTATATCGGACGCCTCAGTATC--TGCANNATC-TNTGA 522 consensus_9237#2 GTCTGGGTGACGATGATGCCAACATCGAGGACTACTTCATCACGTGGAAGGAAAAGTTTT 561 * * consensus_9237#1 ACGTGT-CTCCATACTTTGGACTGACTATCTATCC----GGCTATGCGTAATCAGTAAGT 982 consensus_9237#4 AACAAG-GTCGG------------------------------------------------ 553 consensus_9237#0 AAAAAAAGTACAAACATTGGGGGAGCATCATATTCCCTGGCCTTGGAGCTGCTGACGACG 816 consensus_9237#3 AACGGC-GTATAATAGCTGTGAT-ATGGTTCATTC----AGCTAGNATTNAATCGTGGGT 576 consensus_9237#2 GGCCCACGGTTTGCGACTACTTCGGCATCGAGAGCAC-GGGCGAGGATGTGCTGATGCGG 620 consensus_9237#1 CACTGGAAGCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTT- 1041 consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 TACGTGGGTCCAATGTCTTTGATATATGTTGGGAGGTTCATGCAGTTGACTTAACAATTT 876 consensus_9237#3 TTCGAGCCTTTTT----------------------------------------------- 589 consensus_9237#2 CAGTACCGCCTGCTGGAGCAGCCGGACGTGAG---------------------------- 652 consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 TCACATACCGGTTTAATTCTTTGGTGACTTTGGTCCTTGGGAACTCTTTCGCCACTGGCC 936 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 TTGCTAATCGACTTTGTAATTTTCGAAAGCTGTCTGCCTAAAACAATTTCTGAAAATATT 996 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 GAGATACCATCCTATTATGTGATGATTACTGTTTTTGTTCAATCCGAGATATTCTTTTTA 1056 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 CTACAATCATCAACTCGCAGGACTTTACATCAAGCCCGGCATGGGTTCAAGCTTTGGACG 1116 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 TGTCTCCATACTTTGGACTGACTATCTATCCGGCTATGCGTAATCAGTAAGTCACTGGAA 1176 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 GCCAGTCAAGCCCACTAGTAGTACAGGCAGGCTTTGACCGACTACGCTTTTGTTGTGCCC 1236 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 ------------------------------------------------------------ consensus_9237#4 ------------------------------------------------------------ consensus_9237#0 GGAAGAAGAAGAAGAAGAAGAATTTTAACTGATTTTAAAAATACAATCATCATCCGATAT 1296 consensus_9237#3 ------------------------------------------------------------ consensus_9237#2 ------------------------------------------------------------ consensus_9237#1 -------------------- consensus_9237#4 -------------------- consensus_9237#0 ACGCTATCGTAACAGGGTAA 1316 consensus_9237#3 -------------------- consensus_9237#2 -------------------- |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||