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These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9250#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1330 fasta sequence
[ACACAGCTCCGAACGGGCACAGCTCACAATTCTTCGAGGCAATCAGGCTAATCGATTGAATTCCACTATCGCTAAGAACACGGGGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCATGAAAGCTATGTAAAGATGTTACGTGACCTAGGGTTGGACGTGATCGAACTGCCGCCGGACGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAATCGCTTTAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGGGCTGTACTGAAGAAGGAACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCTAGACTGGACGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGCAAGTGGACCAACGAGGCCGGTG-CTCGCGCTGTGGCGGCCGCCTTTCCCGAGTATCCCTGTGTTCCGATTAAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGA--CCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTGACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTCTTTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTTTTTTACGTATTTTATATATAGTTTTTGTGTATGTTGTTCCATGACCGAGTAATTATGATTATATGTTTGCTTTAGGAACGAAATATTCCTGAAGATGTGTTTTTAAATCTATTTATTCGTTTTCCATAACTGGGTGTGTATGTTTGGCAGCGAAACCTGCTGCTC-CNAGTTATTGTGAAAGTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTCGCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAGATGTGGTTAGTAATTCCAACTCCAAAACCCAAACACTCCAGTGTACACCACCACGCCACGAGCGAAATCTGCCCGTTGCTAATGGTACAATTT]
[+] EMBL CNS0987H [ACACAGCTCCGAACGGGCACAGCTCACAATTCTTCGAGGCAATCAGGCTAATCGATTGAATTCCACTATCGCTAAGAACACGGGGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCATGAAAGCTATGTAAAGATGTTACGTGACCTAGGGTTGGACGTGATCGAACTGCCGCCGGACGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAATCGCTTTAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGGGCTGTACTGAAGAAGGAACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCTAGACTGGACGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGCAAGTGGACCAACGAGGCCGGTGCCTCGCGCTGTGGCGGCCGCCTTTCCCGAGTATCCCTGTGTTCCGATTAAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGA CCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTGACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGATTTTGTCG ]
[+] EMBL BX622238 [ AGGCAATCAGGCTAATCGATTGAATTCCACTATCGCTAAGAACACGGGGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCATGAAAGCTATGTAAAGATGTTACGTGACCTAGGGTTGGACGTGATCGAACTGCCGCCGGACGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAATCGCTTTAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGGGCTGTACTGAAGAAGGAACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCTAGACTGGACGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGTAAGTGGACCAACGAGGCCGGTG CTCGCGCTGTGGCGGCCGCCTTTCCCGAGTATCCCTGTGTTCCGATTAAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGA CCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTCACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGT ]
[+] EMBL BX627314 [ CTGGACGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGCAAGTGGACCAACGAGGCCGGTG CTCGCGCTGTGGCGGCCGCCTTTCCCGAGTATCCCTGTGTTCCGATTAAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGA CCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTGACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTCTTTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTTTTTTACGTATTTTATATATAGTTTTTGTGTATGTTGTTCCATGACCGAGTAATTATGATTATATGTTTGCTTTAGGAACGAAATATTCCTGAAGATGTGTTTTT AATCTATTTATTCGTTTTCCATAACTGGGTGTGTATGTTTGGCAGCGAAACCTGCTG ]
[+] EMBL BX627392 [ CGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGCAAGTGGACCAACGAGGCCGGTG CTCGCGCTGTGGCGGCCGCCTTTCCCGAGTATCCCTGTGTTCCGATTAAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGA CCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTGACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTCTTTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTTTTTTACGTATTTTATATATAGTTTTTGTGTATGTTGTTCCATGACCGAGTAATTATGATTATATGTTTGCTTTAGGAACGAAATATTCCTGAAGATGTGTTTTTAAATCTATTTATTCGTTTTCCATAACTGGGTGTGTATGTTTGGCAGCGAAA CTGCTGCTC CNAGT ]
[-] EMBL CNS0987I [ CGATTAAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGACCCCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCAC CCCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTGACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGGGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTC TTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTTTTTTACGTATTTTATATATAGTTTTTGTGTATGTTGTTCCATGACCGAGTAATTATGATTATATGTTTGCTTTAGGAAC ]
[-] EMBL BX617216 [ TCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTC TTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTTTTTTACGTATTTTATATATAGTTTTTGTGTATGTTGTTCCATGACCGAGTAATTATGATTATATGTTTGCTTTAGGAACGAAATATTCCTGAAGATGTGTTTTTAAATCTATTTATTCTTTTTCCATAACTGGTTGTGTATGTTTGGCAGCGAAACCTGCTGCTCACAAG TATTGTGAAAGTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTCGCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAGATGTGGTTAGTAATTCCAACTCCAAAACCCAAACACTCCAGTGTACACCACCACGCCACGAGCGAAATCTGCCCGTTGCTAATGGTACAATTT]
consensusID : consensus_9250#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1167 fasta sequence
[GTGGTACTTTCCNACATACCCNATGTGTACCCGGCAGCGCCTTACGATTTCTATTATGCGTTATCAGTAGNACACAGATCGCACGATGGTTTTGCTGGCTTGGGTCNGATAATNGCCCAGTTTCATTNGCACTTAANNAAGCTGCTACTTTGNTCAACTTACCGAAACGGACTCATACGAATGTCAGGCGTGCTCCTTTACACGTTGTTTATGCATGATTACTAATTTTAGCATTGTTGCTNTTTANANTCTTTTCTAAATAGAAGGAGCCTCTTCTAGTTTGATGTTTGGTGGTGTTGTAACTTTACAAGTGCATCAATTTGAAATGGTTGAAATGGCTTGTTTTTTCAGTGCATTTCTTTTATATGTGTTTTTTTTTTTAATTTATCGAGCACTTTCTCAACTATGCCAGCAGTAGTCTGCTTTTTTGCAAATTTTAAAATAGTTTGATAATTTGTGCCCTGGCTAGTTTGACGCACTGCAACACCAGCGCAGCTTGAGTATCTGCTTACAAGTGATTATTACATTATTCGCTCTGCGGCAGTACATCAAAANCNGGCGGTCACAAGTTAACCGTTTGTCTATTCTCGTTTTCGCCAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGACCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTCACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGGTAATAGGAATGGGGCCTCACCGACGCTACTCTGTTGACCGGTGGCACTGTCGTACGAGCTAACGCTTTTCGTTTTTCCTGCAATCTTCCCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTAC--ATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTCTTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTT]
[-] EMBL BX624318 [GTGGTACTTTCCNACATACCCNATGTGTACCCGGCAGCGCCTTACGATTTCTATTATGCGTTATCAGTAGNACACAGATCGCACGATGGTTTTGCTGGCTTGGGTCNGATAATNGCCCAGTTTCATTNGCACTTAANNAAGCTGCTACTTTGNTCAACTTACCGAAACGGACTCATACGAATGTCAGGCGTGCTCCTTTACACGTTGTTTATGCATGATTACTAATTTTAGCATTGTTGCTNTTTANANTCTTTTCTAAATAGAAGGAGCCTCTTCTAGTTTGATGTTTGGTGGTGTTGTAACTTTACAAGTGCATCAATTTGAAATGGTTGAAATGGCTTGTTTTTTCAGTGCATTTCTTTTATATGTGTTTTTTTTTTTAATTTATCGAGCACTTTCTCAACTATGCCAGCAGTAGTCTGCTTTTTTGCAAATTTTAAAATAGTTTGATAATTTGTGCCCTGGCTAGTTTGACGCACTGCAACACCAGCGCAGCTTGAGTATCTGCTTACAAGTGATTATTACATTATTCGCTCTGCGGCAGTACATCAAAANCNGGCGGTCAC ]
[-] EMBL BX613378 [ TGCATCAATTTGAAATGGTTGAAATGACTTGTTTTTTCAGTGCATTTCTTT TATGTG TTTTTTTTTTAATTTATCGAGCACTTTCTCAACTATGCCAGCAGTAGTCTGCTTTTTTGCAAATTTTAAAATAGTTTGATAATTTGTGCCCTGGCTAATTTGACGCACTGCAACACCAGCGCAGCTTGAGTATCTGCTTACAAGTGATT TTACATTATTCGCTCTGCGGCAGTACATCAAAA CCGGCGGTCACAAGTTAACCGTTTGTCTATTCTCGTTTTCGCCAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAGGACCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTCACGCGATCCGTGGACGAAATTCCAGTCTCGACGCAGGTAATAGGAATGGGGCCTCACCGACGCTACTCTGTTGACCGGTGGCACTGTCGTACGAGCTAACGCTTTTCGTTTTTCCTGCAATCTTCCCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTAC ATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGC ]
[-] EMBL BX616730 [ ACGCTACTCTGTTGACCGGTGGCACTGTCGTACGAGCTAACGCTTTTCGTTTTTCCTGCAATCTTCCCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACCAATGTCCGAGCTGGGCAAGTTTTCCAACGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATCAAGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAAACGTTACATTTTTCTCTTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTGCAAAACACAAAACATTT]
consensusID : consensus_9250#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 868 fasta sequence
[GCAGAATCGGCACGAGGGTTTTTAAATCTATTTATTCGTTTTCCATAACTGGTTGTGTATGTTTGGCAGCGAAACCTGCTGCTCACAAGTATTGTGAAAGTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTCGCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAGATGTGGTTAGTAATTCCAAC-ACGGCGGCAACTAAACATATTATTTTTCGCGGATAATTGTCGATACTAGTCATCTAAATGGGCATTACTACTTTCCAACTCCAAAACCCAAACACTCCAGTGTACACCACCACGCCACGAGCGAAATCTGCCCGTTGCTAATGGTACAATTTTTGCTGCTTAAAAAATTCCTGACTTTTTCCCAATTTTAAACCACTATCGTTCCAATGATATTAATCTTAATGCTAGCGAATACTCTCTCTCTCTCTCTCTATCTCTCTTTTCTGGAGTGCGAAGAAAAAGGGGTCGCAAATAAAAATCTCATTCTAAACCTAAGCTCAATTCTAACTCGATATTTTCGGTCGCAACCGGTGTNTCNTAGGCTGAAACTGTGCGGTGTGTGAGGAGTACAAATGTGTATTTTGCAACTGTTTCTCGACCAATANAGTAAAACGAACAAAACAAAACCAACAAAAGGNAGTATTTACAAACGTAGCAATTTAGTTCCGTAAAACGACCATGGAATTTCCTTCCTCTTAACTAATCCTCTTAATTACACCGCAAAACCCTNATACATTTNGAGCGACAAGGGAATCACACGATNNTCGCAACTTGGTTAACCCTNCCTTCTNAACAAAACAACAACACAACATCACACACGAACGAA]
[+] EMBL BX468457 [GCAGAATCGGCACGAGGGTTTTTAAATCTATTTATTCGTTTTCCATAACTGGTTGTGTATGTTTGGCAGCGAAACCTGCTGCTCACAAGTATTGTGAAAGTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTCGCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAGATGTGGTTAGTAATTCCAACAAGGGCGGCAACTAAACATATTATTTTTCGCGGACAATTGTCGATACTAGTCATCTAAGTGGGCATTACTGCTTTCCAACTCCAAAACCCAAACACTCCAGTGTACACCACCACGCCACGAGCGAAATCTGCCCGTTGCTAATGGTACAATTTTTGCTGCTTAAAAAATTCCTGACTTTTTCCCAATTTTAAACCACTATCGTTCCAATGATATTAATCTTAATGCTAGCGAATACTCTCTCTCTCTCTCTCTATCTCTCTTTTCTGGAGTGCGAAGAAAAAGGGGTCGCAAATAAAAATCTCATTCTAAACCTAAGCTCAATTCTAACTCGATATTTTCGGTCGCAACCGGTGTNTCNTAGGCTGAAACTGTGCGGTGTGTGAGGAGTACAAATGTGTATTTTGCAACTGTTTCTCGACCAATANAGTAAAACGAACAAAACAAAACCAACAAAAGGNAGTATTTACAAACGTAGCAATTTAGTTCCGTAAAACGACCATGGAATTTCCTTCCTCTTAACTAATCCTCTTAATTACACCGCAAAACCCTNATACATTTNGAGCGACAAGGGAATCACACGATNNTCGCAACTTGGTTAACCCTNCCTTCTNAACAAAACAACAACACAACATCACACACGAACGAA]
[-] EMBL AGA280664 [ GCGAAACCTGCTGCTCACAAGTATTGTGAAAGTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTCGCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAGATGTGGTTAGTAATTCCAAC ACGGCGGCAACTAAACATATTATTTTTCGCGGATAATTGTCGATACTAGTCATCTAAATGGGCATTACTACTTTCCAACTCCAAAACCCAAACACTCCAGTGTACACCACCACGCCACGAGCGAAATCTGCCCGTTGCTAATGGTACAATTTTTGCTGCTTAAAAAATTCCTGACTTTTTCCCAATTT ]
[+] EMBL AGA282285 [ CTGCTCACAAGTATTGTGACCCTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTCGCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAGATGTGGTTAGTAATTCCAAC ACGGCGGCAACTAAACATATTATTTTTCGCGGATAATTGTCGATACTAGTCATCTAAATGGGCATTACTACTTTCCAACTCCAAAACCCAAACACTCCAGTGTNNACCACCACGCCACGAGCGAAATCTGCCCGTTGCCAATGGTACAATTTTTGCTGCTTAAAAAATTCCTGACTTTTTCCC ]
consensusID : consensus_9250#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 665 fasta sequence
[GGCCTGGGTGTGCCGAATGTTCGTCCGTTGAGTGTGCAATTTTATTTCGTGTATTCACTCCCTCCCTTCCAATTACCATTCTTCCCGAGTAGGACCGAAGGTGTAGACTGCGTGTGTGTGTGTGCGCGCTTTTGTGTGTTGTTTTTGTATATTAAATGTGCTCATAGTCCACCCATCGGTAGCCCCAGTAGCTCCATCATTTGTCCGGTACGGTACTAATTTGGTCAACGTGAAATCATATTTAGTTAGGCATGGCGTCACCCTTCCGCTATACACACGCAATCACTGCCAGAATTCCACTATCGCTAAGAACACGGGGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCATGAAAGCTATGTAAAGATGTTACGTGACCTAGGGTTGGACGTGATCGAACTGCCGCCGGACGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAATCGCTTTAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGGGCTGTGCTGAAGAAGGAACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCTAGACTGGACGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGCAAGTGGACCAACGAGGCCGGTGCT]
[+] EMBL AGA285413 [GGCCTGGGTGTGCCGAATGTTCGTCCGTTGAGTGTGCAATTTTATTTCGTGTATTCACTCCCTCCCTTCCAATTACCATTCTTCCCGAGTAGGACCGAAGGTGTAGACTGCGTGTGTGTGTGTGCGCGCTTTTGTGTGTTGTTTTTGTATATTAAATGTGCTCATAGTCCACCCATCGGTAGCCCCAGTAGCTCCATCATTTGTCCGGTACGGTACTAATTTGGTCAACGTGAAATCATATTTAGTTAGGCATGGCGTCACCCTTCCGCTATACACACGCAATCACTGCCAGAATTCCACTATCGCTAAGAACACGGGGAGAAATAGATCTAGAAGAGGCAAAATTGCAGC ]
[-] EMBL AGA284116 [ TCATTTGTCCGGTACGGTACTAATTTGGTCAACGTGAAATCATATTTAGTTAGGCATGGCGTCACCCTTCCGCTATACACACGCAATCACTGCCAGAATTCCACTATCGCTAAGAACACGGGGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCATGAAAGCTATGTAAAGATGTTACGTGACCTAGGGTTGGACGTGATCGAACTGCCGCCGGACGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAATCGCTTTAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGGGCTGTGCTGAAGAAGGAACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCTAGACTGGACGGGGGCGACGTGCTGTTCACTGGGCGCGAGTTTTTCGTCGGACTCAGCAAGTGGACCAACGAGGCCGGTGCT]
consensusID : consensus_9250#4 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 569 fasta sequence
[TCCCCCGAGGNNATATCGCAAGCACGATGTTAATTGTCTCAGAAGGTTCCGGGGGAAGAGATGTTTTACGACGTATTTCTTTCAATATTTCTCGTTCAGAGAGAGAGATAAAAATTGGAAAACAGATTCTTTTAAAGAAGCTACAATTTCACATCTTTTATTCCTTTCGCTCAATGATCAAGGTTCAGCAGTGTATTAGACGAATAGTTACGACACGAACCGAAATCAATNGTCCGGTCTGTACGAAGCTAAGAGTTCGGCGTTAAACGTTTTGTAAAATAAACCTCCCCTATTCGTTGTTTTTTTTTTGTTCCGGTTTTACCTTATTTTGGTCCGAGAAACAGTTGCAAAATACACATTTGTACTCCTCACACACCGCACAGTTTCAGCAAAAAACACCGGTTGCGACCGAAAGTATCGAGTTAGAATTGAGTTAGGTTTAGAATGAGATTTCTTATTTGCGACCCCTTTCTCTTCGCACTCCAGAAAAGAGAGATAGAGAGAGAGAGAGAGTATTCGCTAGCATTAAGATTAATATCATTGGAACGATAGTGGTTTAAAATTGGGAA]
[+] EMBL AL933676 [TCCCCCGAGGNNATATCGCAAGCACGATGTTAATTGTCTCAGAAGGTTCCGGGGGAAGAGATGTTTTACGACGTATTTCTTTCAATATTTCTCGTTCAGAGAGAGAGATAAAAATTGGAAAACAGATTCTTTTAAAGAAGCTACAATTTCACATCTTTTATTCCTTTCGCTCAATGATCAAGGTTCAGCAGTGTATTAGACGAATAGTTACGACACGAACCGAAATCAATNGTCCGGTCTGTACGAAGCTAAGAGTTCGGCGTTAAACGTTTTGTAAAATAAACCTCCCCTATTCGTTGTTTTTTTTTTGTTCCGGTTTTACCTTATTTTGGTCCGAGAAACAGTTGCAAAATACACATTTGTACTCCTCACACACCGCACAGTTTCAGCAAAAAACACCGGTTGCGACCGAAAGTATCGAGTTAGAATTGAGTTAGGTTTAGAATGAGATTTCTTATTTGCGACCCCTTTCTCTTCGCACTCCAGAAAAGAGAGATAGAGAGAGAGAGAGAGTATTCGCTAGCATTAAGATTAATATCATTGGAACGATAGTGGTTTAAAATTGGGAA]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9250#0 ------------------------------------------------------------
consensus_9250#3 GGCCTGGGTGTGCCGAATGTTCGTCCGTTGAGTGTGCAATTTTATTTCGTGTATTCACTC 60
consensus_9250#1 --------------------------GTGGTACTTTCCNACATACCCNATGTGTACCCGG 34
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ------------------------------------------------------------
consensus_9250#3 CCTC-CCTTCCAATTACCATTCT---TCCCGAGTAGGACCGAAGGTGTAGACTGCGTGTG 116
consensus_9250#1 CAGCGCCTTACGATTTCTATTATGCGTTATCAGTAGNACACAGATCGCACGATGGTTTTG 94
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ------------------------------------------------------------
consensus_9250#3 TGTGTGTGCGCGCTTTTGTGTGTTGTTTTTGTATA---TTAAATGTGCTCATAGTCCACC 173
consensus_9250#1 CTGGCTTGGGTCNGATAATNGCCCAGTTTCATTNGCACTTAANNAAGCTGCTACTTTGNT 154
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ------------------------------------------------------------
consensus_9250#3 CATCGGTAGCCCCAGTAGCTCCATCATTTGTCCGGTACGGTACTAATTTGGTCAACGTGA 233
consensus_9250#1 CAACT-TACCGAAACGGACTCATACGAATGTCAGGC---GTGCTCCTTTACACGTTGTTT 210
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ACACAGCTCCGAACGGGCACAGC-TCACAATTCTTCGAGGCAATCAGGCTAATCGATTGA 59
consensus_9250#3 AATCATATTTAGTTAGGCATGGCGTCACCCTTCCGCTATACACACGCAATCACTGCCAGA 293
consensus_9250#1 ATGCATGATTA-CTAATTTTAGCATTGTTGCTNT-TTANANTCTTTT-CTAAATAGAAGG 267
consensus_9250#2 ----------------------------------GCAGAATCGGCACGAGGGTTTTTAAA 26
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ATTCCACTATCGCTAAGAACACGG-GGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCA 118
consensus_9250#3 ATTCCACTATCGCTAAGAACACGG-GGAGAAATAGATCTAGAAGAGGCAAAATTGCAGCA 352
consensus_9250#1 AGCCTCTTCTAGTTTGATGTTTGGTGGTGTTGTAACTTTACAAGTG-CATCAATTTGAAA 326
consensus_9250#2 TCTATTTATTCGTTTTCCATAACT-GGTTGTGTATGTTTGGCAGCG--AAACCTGCTGCT 83
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 TGAAAGCTATGTAAAGATGTTAC-GTGACCTAGGGTTGGACGTGAT-CGAACTGCCGCCG 176
consensus_9250#3 TGAAAGCTATGTAAAGATGTTAC-GTGACCTAGGGTTGGACGTGAT-CGAACTGCCGCCG 410
consensus_9250#1 TGGTTGAAATGGCTTGTTTTTTCAGTGCATTTCTTTTATATGTGTT-TTTTTTTTTAATT 385
consensus_9250#2 CACAAGTATTGTGAAAGTATTA-----AATTTATTCTGCACACATTTCAAAAGGTTGCCG 138
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 GA-CGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAAT 235
consensus_9250#3 GA-CGAAAATTTACCCGAATGTCCGTTCGTCGAGGACTGCGCCGTCGTTTGCAATGGAAT 469
consensus_9250#1 TATCGAGCACTTTCTCAACTAT--GCCAGCAGTAGTCTGCTTTTTTGCAAATTTTAAAAT 443
consensus_9250#2 TGTCGCGTGTCCACAGAAATGC--GTTAGTATTTATCAG---TTGCGTTTGCATCTCAGT 193
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 CGCTT--TAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGG 293
consensus_9250#3 CGCTT--TAATTTGCCGGCCCGGCGATCCCCATCGGTTGCAGGAAGTCGAAGCGGTACGG 527
consensus_9250#1 AGTTTGATAATTTGT-GCCCTGGCTAGTTTGACGCACTGCA--ACACCAGCGCAGCTTGA 500
consensus_9250#2 TTCGTGTAGATGTGG----TTAGTAATTCCAACACG--GCGGCAACTAAACATATTATTT 247
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 GC-TGTACTGAAGAAGGA--ACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCT 350
consensus_9250#3 GC-TGTGCTGAAGAAGGA--ACTGGATCTTCCACTGGCTGAAATAGCCGATCCAAACGCT 584
consensus_9250#1 GTATCTGCTTACAAGTGATTATTACATTATTCGCT--CTGCGGCAGTACATCAAAA--NC 556
consensus_9250#2 TTCGCGGATAATTGTCGAT-ACTAGTCATCTAAATGG--GCATTACTACTTTCCAACTCC 304
consensus_9250#4 -------------TCCCCCGAGGNNATATCGCAAGCACGATGTTAATTGTCTCAGAAGGT 47
* * *
consensus_9250#0 AGACTGGACGGGGGCGACGTGCTGTTCA--CTGGGCGCGAGTTTTTCGTCGGAC-TCAGC 407
consensus_9250#3 AGACTGGACGGGGGCGACGTGCTGTTCA--CTGGGCGCGAGTTTTTCGTCGGAC-TCAGC 641
consensus_9250#1 NGGCGGTCACAAGTTAACCGTTTGTCTATTCTCGTTTTCGCCAGGTAACTGAACATCACC 616
consensus_9250#2 AAA----ACCCAAACACTCCAGTGTACA------CCACCACGCCACGAGCGAAA-TCTGC 353
consensus_9250#4 TCCGGGGGAAGAGATGTTTTACGACGTATTTCTTTCAATATTTCTCGTTCAGAG---AGA 104
* *
consensus_9250#0 AAGTGGACCA--ACGAGGCCGGTGCTCGCGCTGTGGCGGCCGCCTTT--CCCGAGTATCC 463
consensus_9250#3 AAGTGGACCA--ACGAGGCCGGTGCT---------------------------------- 665
consensus_9250#1 ATCTCAAGTATTACGTGTCCATGGGAGGACCCGACGTACTCTGCGTCAGTCGGAGCAAGG 676
consensus_9250#2 CCGTTGCTAATGGTACAATTTTTGCTGCTTAAAAAATTCCTGACTTTTTCCCAATTTTAA 413
consensus_9250#4 GAGATAAAAATTGGAAAACAGATTCTTTTAAAGAAGCTACAATTT-----CACATCTTTT 159
*
consensus_9250#0 CTGTGTTCCGATT-AAGGTAACTGAACATCACCATCTCAAGTATTACGTGTCCATGGGAG 522
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 AGTCGCAAGAGAT-CTTGAAACGGATCGAAAGGGAAGCAACGTTTACGTACCACACGCTG 735
consensus_9250#2 ACCACTATCGTTCCAATGATATTAATCTTAATGCTAGCGAATACTCTCTCTCTCTCTCTC 473
consensus_9250#4 ATTCCTTTCGCTCAATGATCAAGGTTCAGCAGTGTATTAGA---CGAATAGTTACGACAC 216
consensus_9250#0 GACCCGACGTACTCTGCGTCAGTCGGAGCAAGGAGTCGCAAGAGATCTTGAAACGGATCG 582
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ACGCTACAGGAGGAGACAGCAGCTAATGTGCTGTACATCAACGGCACACTCGTCACGCGA 795
consensus_9250#2 TATCTCTC-TTTTCTGGAGTGCGAAGAAAAAGGGGTCGCAAATAAA----AATCTCATTC 528
consensus_9250#4 GAACCGAAAT-CAATNGTCCGGTCTGTACGAAGC-TAAGAGTTCGGCGTTAAACGTTTTG 274
consensus_9250#0 AAAGGGAAGCAACGTTTACGTACCACACGCTGACGCTACAGGAGGAGACAGCAGCTAATG 642
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 TCCGTGGACGAAATTCCAGTCTCGACGCAGGTAATAGGAATGGGGCCTCACCGAC-GCTA 854
consensus_9250#2 TA----AACCTAAGCTCAATTCTAACTCGAT--ATTTTCGGTCGCAACCGGTGTNTCNTA 582
consensus_9250#4 TAAAATAAACCTCCCCTATTCGTTGTTTTTT---TTTTGTTCCGGTTTTACCTTATTTTG 331
consensus_9250#0 TGCTGTACATCAACGGCACACTCGT--GACGCGATCCGTGGACGAAATTCCAGTCTCGAC 700
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 CTCTGTTGACCGGTGGCACTGTCGTACGAGCTAACGCTTTTCGTTTTTCCTGCAATCTTC 914
consensus_9250#2 GGCTGAAACTGTGCGGTGTGTGAGGA-GTACAAATGTGTATTTTGCAACTGTTTCTCGAC 641
consensus_9250#4 GTCCGAGAAACAGTTGCA-------------AAATACACAT-TTGTACTCCTCACACACC 377
consensus_9250#0 GCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGG 760
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 CCAGATTTTGTCGCAGAAAATTGACGCTCCACGCCAGATGCTGTACATGTCCGAGCTGGG 974
consensus_9250#2 CAATANAGTAAAACGAACAAAACAAAACCAACAAAAGGNAGTATTTACAAACGTAGCAAT 701
consensus_9250#4 GCACAGTTT-CAGCAAAAAACACCGGTT--GCGACCGAAAGTAT-CGAGTTAGAATTGAG 433
consensus_9250#0 CAAGTTTTCCAA--CGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATC 818
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 CAAGTTTTCCAA--CGGTCTTACTGCGTGCTCTATTCTGGTCAAACGTTCCAAGCACATC 1032
consensus_9250#2 TTAGTTCCGTAAAACGACCATGGAATTTCCTTCCTCTTAACTAATCCTCTTAATTACACC 761
consensus_9250#4 TTAGGTTTAGAATGAGATTT---------CTTATTTGCGACCCCTTTCTCTTCGCACTCC 484
consensus_9250#0 A-AGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAA 877
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 A-AGAGCCTTTGAACGAAAAACAAAACACAACACATCGACAAGCTCTAGAAACGCGAGAA 1091
consensus_9250#2 GCAAAACCCTNATACATTTNGAGCGACA-AGGGAATCACACGATNNTCGCAACTTGGTTA 820
consensus_9250#4 AGAAAA----GAGAGATAGAGAGAGAGAGAGAGTATTCGCTAGCATTAAGATTAATATCA 540
consensus_9250#0 ACGTTACATTTTTCTCTTTTTTTTTCGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTG 937
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ACGTTACATTTTTCTCTTTTTTTT-CGTTAATTAACTTATTTTGTGTGCAGTGTGTGTTG 1150
consensus_9250#2 ACCCTNCCTTCTNAACAAAACA----ACAACACAACATCACACACGAACGAA-------- 868
consensus_9250#4 TTGGAACGATAGTGGTTTAAAATT--GGGAA----------------------------- 569
consensus_9250#0 CAAAACACAAAACATTTTTTTACGTATTTTATATATAGTTTTTGTGTATGTTGTTCCATG 997
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 CAAAACACAAAACATTT------------------------------------------- 1167
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ACCGAGTAATTATGATTATATGTTTGCTTTAGGAACGAAATATTCCTGAAGATGTGTTTT 1057
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ------------------------------------------------------------
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 TAAATCTATTTATTCGTTTTCCATAACTGGGTGTGTATGTTTGGCAGCGAAACCTGCTGC 1117
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ------------------------------------------------------------
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 TCCNAGTTATTGTGAAAGTATTAAATTTATTCTGCACACATTTCAAAAGGTTGCCGTGTC 1177
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ------------------------------------------------------------
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 GCGTGTCCACAGAAATGCGTTAGTATTTATCAGTTGCGTTTGCATCTCAGTTTCGTGTAG 1237
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ------------------------------------------------------------
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 ATGTGGTTAGTAATTCCAACTCCAAAACCCAAACACTCCAGTGTACACCACCACGCCACG 1297
consensus_9250#3 ------------------------------------------------------------
consensus_9250#1 ------------------------------------------------------------
consensus_9250#2 ------------------------------------------------------------
consensus_9250#4 ------------------------------------------------------------
consensus_9250#0 AGCGAAATCTGCCCGTTGCTAATGGTACAATTT 1330
consensus_9250#3 ---------------------------------
consensus_9250#1 ---------------------------------
consensus_9250#2 ---------------------------------
consensus_9250#4 ---------------------------------
|
| Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||