These datas are free for academic use only, please contact me for any other use. Anopheles gambiae see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9251#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 13 consensus length = 2211 fasta sequence [CCGCGTCATTACCGAGCATTATCATCGTCGGCCAACACACTGTACTTTTACTACCAGTAGTTGTTTGCCAATTATAATTATAATTATTATTATTGTGACGTTCCGTTCCCTAGCGCCCTATTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGA-AAGGGC-TCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC-TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC-GGTATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA-GAAGAAGAAAAAA-ACAGAG-AATTGAAA-AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGACGAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTAGGACATTGCGACA-CCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAGTGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGATCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCC-AAAAAATTTCAAAAAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGCGAAACCCCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA-CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTCTGTCTAAGCTTTTTGTTAGTGTATAAGTTTTAATTGTATAACTCGTATCCATAATCTTATTATTACTATTACTATTATTATATTATTATTTAACTTTTGCCTAATTTGTATAAGTAT] [+] EMBL BM632206 [CCGCGTCATTACCGAGCATTATCATCGTCGGCCAACACACTGTACTTTTACTACCAGTAGTTGTTTGCCAATTATAATTATAATTATTATTATTGTGACGTTCCGTTCCCTAGCGCCCTATTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGACAAGGGC TCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCACGGGTATTAGGGTGTAGCTTTGCA ] [+] EMBL BM635722 [ ccgGCCCTATTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGACAAGGGC TCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGTATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA GAAGAAGAAAAAA ACAGAG AATTGAAA AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGACGAAAGAA ] [+] EMBL AL932653 [ ccgagcTTTAGAGA CAGG CTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGCAACGTAAATGTTGCATTTTCTTATTTGATTTGTTTGGTACTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTC TGGGTTTTTTTGTAATTTGCTCCCCC TTTTCTGTACGATAAGAAAAAAACCCCGCAAATTGATGCTTTAGTTGTTTTAAGTCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTATAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTTTCCCCTTTTTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGTATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAACNAAGAAGAAAAAANACAGAGCAATTGAAACAGCTTTCGAACAGTGCAGTACCAGTGCAAGGACAGTGGAAAGTAC ] [+] EMBL BM617450 [ ccggAGAGA GAGCCCTTGTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGTATTAGG ] [+] EMBL BX626633 [ TCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTTTTGTGTACAGTTTTCTCCCC TTCTTTTGTAAGCAATTTTAACATTTACTCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAATTCTGAAGGGAACAGCAGCACAGTACAATACGTAGCAC GGNATTAGGTTGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA GAAGAAGAAAAAA ACAGAG AATTGAAA AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGNCGACGAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTANGACATTGCGACACCCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTT ] [+] EMBL BM612881 [ cgtccgGTAGCTTTGCAGCGTTGCTATTGCAATGATTGTTTAGAA GAAGAAGAAAAAA ACAGAG AATTGAAA AGCTTCCGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGACGAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTAGGACATTGCGACA CCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAGTGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGATCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCC AAAAAATTTCAAAAAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGCGAAACCCCCAAAAC ] [+] EMBL BM578362 [ ccgGGAAACTAAACGCTTGCGAATTTTAGTAATTAGTGGTTAGGACATTGCGACA CCCTTACTCGATTCGATAAACGAGCAGCACGAGCTAACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAGTGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGATCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCC AAAAAATTTCAAAAAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGCGAAACCCCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATA ] [+] EMBL BX626096 [ AACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAAAATCAAACGTGTGGTGCAAACGCGTTCAACTCCAAAAAAAATTC AAAAAAAAAGTGTGATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGTCGCAGACGATCGTCGGC AAACACCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTTTTTGGAAGAAAGTGATAGGATTGC AAAAAAACAGCTGATCGTACTGTGTAATAAGCGAGAGACAAATGGAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTC ] [+] EMBL BX623870 [ GCGCCACCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCGTTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGNAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGANGATGGATG ] [+] EMBL BX623158 [ TTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGTGGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAG ] [+] EMBL BX615742 [ TCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCT ] [+] EMBL BX609974 [ AGAAAGTGATAGGATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTCTGTCTAAGCTTTTTGTTAGTGTATAAGTTTTAATTGTATAACTCGTATCCATAATCTTATTATTACTATTACTATTATTATATTATTATTTAACTTTTGCCTAATTTGTATAAGTAT] [+] EMBL BX615982 [ ACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAA CCTTTGGCGAATTTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTCTGTCTAAGCTTTTTGTTAGTGTATAAGT ] consensusID : consensus_9251#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 699 fasta sequence [CCGCGGACGCGTGGGCGGACGCGTGGGGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTC] [+] EMBL BM608313 [CCGCGGACGCGTGGGCGGACGCGTGGGGGAATACATTTGGTTTCGATACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGGATTGCAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGCTTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAGCAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAAAAAAAAAACACTCACGTTCATCATTTATCTGTATTTGTAAAACCATGTCACCTGCGTAAATAGCGATCCCGATCAAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATTGATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGGCGAATCTTGCGAGCACGATTAAACACGGCACACTGTGTAACTGTAGAGGATGGATGCTTTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATGCTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCTGCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCCCTC] consensusID : consensus_9251#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 532 fasta sequence [AGCAGAATCGCCCGAGGTTAAGGTGCATCTTTTAGAGACAAGGGCTCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTATAATTTATTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTAANGTGTACAGTTTTCTCCCCTTCTTTATGTAAGCAATTTTAACATTTACTCGCCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTCATGGCAGAGAGAACGGAATTCTGAACGGGAACAGCAGCACAGTACAATACGTAGCACGGTATNAGGTTGTAGCTTTGC] [+] EMBL AL696600 [AGCAGAATCGCCCGAGGTTAAGGTGCATCTTTTAGAGACAAGGGCTCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTTCTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTATAATTTATTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTCAGTTCGAATTTAANGTGTACAGTTTTCTCCCCTTCTTTATGTAAGCAATTTTAACATTTACTCGCCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTCATGGCAGAGAGAACGGAATTCTGAACGGGAACAGCAGCACAGTACAATACGTAGCACGGTATNAGGTTGTAGCTTTGC] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9251#0 CCGCGTCATTACCGAGCATTATCATCGTCGGCCAACACACTGTACTTTTACTACCAGTAG 60 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TTGTTTGCCAATTATAATTATAATTATTATTATTGTGACGTTCCGTTCCCTAGCGCCCTA 120 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TTCTCTGAGGGAGAAGTGTGTAGCAAAAAAACGAAGGTGCATCTTTTAGAGAAAGGGCTC 180 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TCTCTCTCTCTCTTCTACTCCCTGTAGCCGGAATGTAGAGAAACGTAAATGTTGCGTTTT 240 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 CTTATTTGATTTGTTTGGTTCTTGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCAT 300 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 ATTTGGTTCTATGTTCCTTTTTTTTTTTTGTAATTTGTTCCCCCTTTTTAAGTACGATAA 360 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 GAAAAAAAACCCGCAAATTGATGCTTTAGTTTTTTAAAATCCTCGGCAACCTGAGGCTCC 420 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 AACGGATACACACGAGCGCGTCTAATTTCGATCGATTTATTAGTGTTCGAGTTCCAATTC 480 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 AGTTCGAATTTTTTGTGTACAGTTTTCTCCCCTTCTTTTGTAAGCAATTTTAACATTTAC 540 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TCGCGTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTATGGCAGAGAGAAGGAAT 600 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TCTGAAGGGAACAGCAGCACAGTACAATACGTAGCACGGTATTAGGTTGTAGCTTTGCAG 660 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 CGTTGCTATTGCAATGATTGTTTAGAAGAAGAAGAAAAAAACAGAGAATTGAAAAGCTTC 720 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 CGAACAGCGCAGTAGCAGTGCAAGGACAGTGGAAAGTACGGGAAATGCATTTTGGCCGAC 780 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 GAAAGAAACAAACGAAACCGAATGTAGAGCGAAGGAAACTAAACGCTTGCGAATTTTAGT 840 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 AATTAGTGGTTAGGACATTGCGACACCCTTACTCGATTCGATAAACGAGCAGCACGAGCT 900 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 AACGAACGCTAGAGCTTGCGAAAGCAATAGTCGATGTTTCGATGGTTCACAAAATTCTAG 960 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TGTGCGGGTTCTGCTGTGCTATATGCAGGAGCGAAACAGATAGATGGAGCGAAAGAGCGA 1020 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TCGGAAAACAGAACAAGAGTAGAACAATCAATCATGACAATCGTTTTAATAGTTAGTCAA 1080 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 AATCAAACGTGTGGTGCAAACGCGTTCAACTCCAAAAAATTTCAAAAAAAAAAAAGTGTG 1140 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 ATACAAAACGAAAACAAAAACCTGTACGTGCGTATGATCGCTCGTAAGACGAAAAACCGT 1200 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 CGCAGACGATCGTCGGCGAAACCCCCAAAACGCAAGGGAAGCAGGGCACGCGAAGCGCCA 1260 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 CCGATCACCTCCTCTTATTTAAAACGTGCGTTAAATTAAGGAGTGTTTTGATTTGCGGCG 1320 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TTTTAGGCAACACCGAACCGAGTTTTGGATAATACGAGGGAGCGAGCGACAGAAGGAGGT 1380 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 GGAGTACAGAGACAGAGTGCAGAGTGGATGTAGGATATAAAGGAATACATTTGGTTTCGA 1440 consensus_9251#1 ------------CCGCGGAC-GCGTGGGCGGACG-CGTGGGGGAATACATTTGGTTTCGA 46 consensus_9251#2 -------------------------------------AGCAGAATCGCCCGAGGTTAAGG 23 * * * **** * consensus_9251#0 TACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGG 1500 consensus_9251#1 TACTCGCGACAGTGCTTTGGCAATGGTTTGACGATTGTTTATTTGGAAGAAAGTGATAGG 106 consensus_9251#2 TGCATCTTTTAGA-----GACAAGGGCTCTCTCTCTCTCTCTTCTACTCCCTGTAGCCGG 78 * * ** * *** ** * * * * ** ** ** consensus_9251#0 ATTGCAAAAAAAAACAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGC 1560 consensus_9251#1 ATTGCAAAAAAAA-CAGCTGATCGTACTGTGCAATAAGCGAGAAGCAAATGAAAAGTAGC 165 consensus_9251#2 AATGTAGAGAAACGTAAATG-TTGCGTTTTCTTATTTG--------ATTTGTTTGGTTCT 129 * ** * * *** * ** * * * * ** * * ** ** consensus_9251#0 TTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAG 1620 consensus_9251#1 TTGATTTGATTTTGGTTAGACTTTTATTTTACCCCGCGACTCGGTTTAGTTTACACAAAG 225 consensus_9251#2 TGTAGTTTACTCTTTTCCAACCGGAGCTGTAGGACCATATTTGGTTCTATGTTCCTTTTA 189 * * ** * * * * ** * ** * * * **** * * * consensus_9251#0 CAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAA-AAAAAAAACACTCAC 1679 consensus_9251#1 CAACGGTCTTATTAATATAAAATGGAACTTTCAATCTTTTGCAA-AAAAAAAACACTCAC 284 consensus_9251#2 TAA----TTTATTGTAATTTGTTCCCCCTTTTTAAGTACGATAAGAAAAAAAACCCGCAA 245 ** ***** ** * **** * * ** ********* * ** consensus_9251#0 GTTCATCATTTATCTGTATTTGTAAAACCATGTCA-CCTGCGTAAATAGCGATCCCGATC 1738 consensus_9251#1 GTTCATCATTTATCTGTATTTGTAAAACCATGTCA-CCTGCGTAAATAGCGATCCCGATC 343 consensus_9251#2 ATTGATGCTTTA---GTTTTTTAAAATCCTCGGCAACCTGAGGCTCCAACGGATACACAC 302 ** ** **** ** *** *** ** * ** **** * * ** * * consensus_9251#0 AAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATT 1798 consensus_9251#1 AAACCCACCCGGCAAGCAGTAATATTGAAACCGGCACATGCCTTGCGAAACGATTCGATT 403 consensus_9251#2 GAGCGCGTCTAATTTCGATCGATTT----ATTAGTGTTCGAGTTCCAATTCAGTTCGA-- 356 * * * * * ** * * * * ** * * * ***** consensus_9251#0 GATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGG-CGAA 1857 consensus_9251#1 GATGGAATGTTTGTAGTAGAAAGGAATAGATTTTACGATAGTACCCAACCTTTGG-CGAA 462 consensus_9251#2 -ATTTAANGTGTACAGTTTTCTCCCCTTCTTTATGTAAGCAATTTTAACATTTACTCGCC 415 ** ** ** * *** * ** * * *** *** ** consensus_9251#0 TCTTGCGAGC----ACGATTAAACA--CGGCACACTGTGTAACTGTAGAGGATGGATGCT 1911 consensus_9251#1 TCTTGCGAGC----ACGATTAAACA--CGGCACACTGTGTAACTGTAGAGGATGGATGCT 516 consensus_9251#2 GTTTCCAAATTGCAACGATCCAGTTGTCGGGACACAGTCATGGCAGAGAGAACGGAATTC 475 ** * * ***** * *** **** ** **** * *** consensus_9251#0 TTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATG 1971 consensus_9251#1 TTCTTGTTAGCGTTAGCGCACTAGATGATACAACGACGACAGTAAAAGCAACGATATATG 576 consensus_9251#2 TGAACGGGAACAGCAGCACAGTACAATACGTAGC----ACGGTATNAGGTTGTAGCTTTG 531 * * * * *** ** ** * * * * ** *** ** * * ** consensus_9251#0 CTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCT 2031 consensus_9251#1 CTCCTTTACATATAAACCAACAGAAGAAGCGTAGGGAGAAAGGGAGAAAAGGGAGCAGCT 636 consensus_9251#2 C----------------------------------------------------------- 532 * consensus_9251#0 GCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCC 2091 consensus_9251#1 GCGGTTGGCTGCGGCCTCTCTATCTATCTCTCTCTCTCTCTCGCGCGCGCTTGCGGAGCC 696 consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 CTCTGTCTAAGCTTTTTGTTAGTGTATAAGTTTTAATTGTATAACTCGTATCCATAATCT 2151 consensus_9251#1 CTC--------------------------------------------------------- 699 consensus_9251#2 ------------------------------------------------------------ consensus_9251#0 TATTATTACTATTACTATTATTATATTATTATTTAACTTTTGCCTAATTTGTATAAGTAT 2211 consensus_9251#1 ------------------------------------------------------------ consensus_9251#2 ------------------------------------------------------------ |
Copyright Wed Dec 3 12:11:56 CET 2003 Hubert Wassner (hubert.wassner@noos.fr) | ||||